prot_P-littoralis_Contig1135.3.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1135.3.2
Unique Nameprot_P-littoralis_Contig1135.3.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length712
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig1135.3.2 vs. uniprot
Match: D8LHD4_ECTSI (Putative leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHD4_ECTSI)

HSP 1 Score: 351 bits (901), Expect = 1.020e-106
Identity = 184/345 (53.33%), Postives = 236/345 (68.41%), Query Frame = 0 
Query:  366 DEVTSARMAEDISDFEGDVMAWSIGEDAVVLQSPGFEFELEVPYLGRNVPALIGRCSSSAEVVDGKQCLLHPALRCLARAGETFDPPLRLRFAVGDLDSMESGSDIGSQRDEVAYRTHLRSAFSALTREDARSEWIPIDGDIVRLEGGVFALEVALSHFCAFALRQDVNVRPGEFKLVPVPRLKHESRKSHYQFFNLGSETLVVHLWGVPQLKSFWDYFKLKVGLGATGGDVDVEVNRTRVRNPSTEPYMMPVP--PIDGTKISFCQRAHDPKELWRVVWTTQK--RISPLIGAGYDEVQIWGSTTMTYKNAVVFGPLREGAMPQIRNFRVDDGHNVSRRVKSVM 706
            D      MAE IS F+G VMAWS G+   VL+S GFEFELEVP LGRNVPALIG  SSSAEVVDG++CLLHP + CLAR+GE FDPPL LRF VGD++SMESGSD GS   EV YR +L S FS LTR+ A SEW+P+DG I + + G+F LEV +SHFC FAL+Q + V  G  +LV +P+LKH+SR+SHY F NLG+E LVVH WGV + + F + F+LK+G G  GGD +VE  RT V  P T  Y + VP  P+D  +   C   +  + L  V +TTQK  R   L G+ ++ VQ+WG+  M +K+A++FG L E A+  + N +V+DG NV   V+S +
Sbjct:  430 DTTVDGGMAE-ISGFDGYVMAWSFGQHPAVLRSNGFEFELEVPRLGRNVPALIGLRSSSAEVVDGEKCLLHPVVTCLARSGEVFDPPLCLRFPVGDVNSMESGSDCGSDDAEVTYRAYLESTFSTLTRKHASSEWVPVDGTIEQTDEGIFVLEVQVSHFCDFALKQAIKVDSGGVELVKLPQLKHKSRRSHYHFVNLGTENLVVHCWGVTRKRGFLESFRLKLGFGLNGGDAEVEATRTLVDAPGTGVYKVDVPGGPVDDPRNEACLVVNGFESL-TVAYTTQKTVRAGTLFGSTHELVQVWGTRHMQHKHAMIFGILPESAL--VPNLKVEDGVNVGELVRSKV 770
[Close]
BLAST of mRNA_P-littoralis_Contig1135.3.2 vs. uniprot
Match: A0A6H5K655_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K655_9PHAE)

HSP 1 Score: 307 bits (786), Expect = 3.350e-95
Identity = 171/347 (49.28%), Postives = 219/347 (63.11%), Query Frame = 0 
Query:  364 DSDEVTSARMAEDISDFEGDVMAWSIGEDAVVLQSPGFEFELEVPYLGRNVPALIGRCSSSAEVVDGKQCLLHPALRCLARAGETFDPPLRLRFAVGDLDSMESGSDIGSQRD---EVAYRTHLRSAFSALTREDARSEWIPIDGDIVRLEGGVFALEVALSHFCAFALRQDVNVRPGEFKLVPVPRLKHESRKSHYQFFNLGSETLVVHLWGVPQLKSFWDYFKLKVGLGATGGDVDVEVNRTRVRNPSTEPYMMPVPPIDGTKISFCQRAHDPKELWRVVWTTQKRISPLIGAGYDEVQIWGSTTMTYKNAVVFGPLREGAMPQIRNFRVDDGHNVSRRVKSVME 707
            DSD + + RMA  ISDFEG+V+AWS G+   VL++   +F+LEVP LGRNVP LIG CSSSAEVVDGKQCLLHP +RCLAR GE+FDP LRLR  +GD  SMESGSD G+  D   +VAYR +L S F+ +TREDA S W+PIDG I + EGGVF LEVA+ HFC FAL Q ++V  G  ++VP+P+LK + R+SH+ F N G E LV H  G  +   FWD+FK+ +G GAT  +V+           ST P           K   C R     E   V WT+Q+       A +   Q+WG + M +K+A+VFGPL      Q+ N +VDDG +  + VKS +E
Sbjct:    7 DSDALINTRMAA-ISDFEGEVVAWSFGDSPDVLRNHDLDFDLEVPDLGRNVPTLIGLCSSSAEVVDGKQCLLHPVVRCLARNGESFDPNLRLRLPLGDEASMESGSD-GASDDXXXDVAYRAYLASKFTVVTREDASSGWVPIDGTIQQAEGGVFVLEVAVPHFCDFALSQGISVPRGCMEIVPLPKLKGKPRRSHFHFVNQGEENLVAHCRGAVEKTGFWDFFKINLGAGATSANVEDPA--------STNP----------NKSEVC-RVFLGTESVTVAWTSQRYPQ---NARHRIPQVWGFSPMQHKHAMVFGPLSGIDTCQVSNLKVDDGESFGKLVKSKVE 329
[Close]
BLAST of mRNA_P-littoralis_Contig1135.3.2 vs. uniprot
Match: A0A6H5KIZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIZ7_9PHAE)

HSP 1 Score: 306 bits (785), Expect = 6.330e-92
Identity = 175/344 (50.87%), Postives = 221/344 (64.24%), Query Frame = 0 
Query:  369 TSARMAEDISDFEGDVMAWSIGEDAVVLQSPGFEFELEV-PYLGRNVPALIGR--CSSSAEVVDGKQCLLHPALRCLARAGETFDPPLRLRFAVGDLDSMESGSDIGSQRD-EVAYRTHLRSAFSALTREDARSEWIPIDGDIVRLEGGV-FALEVALSHFCAFALRQDVNVRPGEFKLVPVPRLKHESRKSHYQFFNLGSETLVVHLWGVPQLKSFWDYFKLKVGLGATGGDVDVEVNRTRVRNPSTEPYMMPVPPI--DGTKISFCQRAHDPKELWRVVWTTQKRISPLIGA-GYDEVQIWGSTTMTYKNAVVFGPLREGAMPQIRNFRVDDGHNVSRRVKS 704
            TS++M+  + DF+GDV+AWS G  A VL+SP  EFELEV P L +N PAL+G   CS SAE V+G+Q LLH  L CL RAGE FDPPL LRF VGD DSMESGS  GSQ D E AYR HL+S FSA+ R+DA SEW+PI GDIVR++GG  F LEV +SHFC F L Q ++V  G  +L+ +P+    SRK+HY F NLG++ LV H+WG  + + F +  +    +   GG V  E+ RT V  P + PY + VP     G+K   C++  D  E   V WTTQ+RISP  G  G+  VQ+WGST M   + +V G +   A P I N RVDDG +V R V S
Sbjct:  224 TSSQMSS-LQDFKGDVVAWSFGNRAEVLRSPDSEFELEVQPGLNKNYPALVGLGLCSGSAEYVNGEQYLLHCVLTCLTRAGEKFDPPLLLRFPVGDEDSMESGSLDGSQDDAEEAYRAHLQSTFSAVKRDDASSEWVPIGGDIVRMKGGRDFFLEVKISHFCDFGLSQAIDVEVGYTELIELPKKMFSSRKTHYHFANLGTKPLVFHVWGAGRKEVFVNVVRANAAVDLAGGSVGAEMERTLVDVPGSGPYEVHVPGEAGSGSKPQVCRKFVD-LEKPTVAWTTQERISPSSGVEGHQLVQVWGSTPMLSGHVLVVGAMAPDATPAIANLRVDDGEDVGRLVWS 565
[Close]
BLAST of mRNA_P-littoralis_Contig1135.3.2 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 2.450e-23
Identity = 53/72 (73.61%), Postives = 62/72 (86.11%), Query Frame = 0 
Query:    1 MASTDRDVLVALYNATDGATWKNKTNWNTGADLSQWHGIEADDQGRVVKLNLASNNLGGFIPKELGDLSELQ 72
            MA TDRDVLVALYNATDG  WKNKTNW+T ADLS WHG++ADDQGRVVKL+L++N L G IP +LG+L EL+
Sbjct:    1 MAPTDRDVLVALYNATDGPNWKNKTNWDTNADLSDWHGVKADDQGRVVKLSLSANKLRGSIPPQLGNLIELK 72
[Close]
BLAST of mRNA_P-littoralis_Contig1135.3.2 vs. uniprot
Match: A0A6H5KVC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVC7_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 3.500e-21
Identity = 49/72 (68.06%), Postives = 55/72 (76.39%), Query Frame = 0 
Query:    1 MASTDRDVLVALYNATDGATWKNKTNWNTGADLSQWHGIEADDQGRVVKLNLASNNLGGFIPKELGDLSELQ 72
            MA  DR+ LVALYNAT GA W+NK NWNT A LSQW+G+E D QGRVV L+LA NNL G IP ELG L+ LQ
Sbjct:   96 MAQPDREALVALYNATGGAKWENKRNWNTRAALSQWYGVEVDSQGRVVTLSLAGNNLQGTIPPELGQLTALQ 167
[Close]
BLAST of mRNA_P-littoralis_Contig1135.3.2 vs. uniprot
Match: D8LFK2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK2_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 8.650e-21
Identity = 50/72 (69.44%), Postives = 54/72 (75.00%), Query Frame = 0 
Query:    1 MASTDRDVLVALYNATDGATWKNKTNWNTGADLSQWHGIEADDQGRVVKLNLASNNLGGFIPKELGDLSELQ 72
            MA TDR  LVALYNAT GA WKN  NW T A LSQWHG+E + QGRVVKL+L  NNL G IPKELG LS L+
Sbjct:   71 MAQTDRKALVALYNATGGAEWKNNQNWTTSAALSQWHGVEVNTQGRVVKLSLGWNNLRGPIPKELGALSRLE 142
[Close]
BLAST of mRNA_P-littoralis_Contig1135.3.2 vs. uniprot
Match: A0A6H5K8T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T5_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 1.730e-20
Identity = 46/70 (65.71%), Postives = 53/70 (75.71%), Query Frame = 0 
Query:    3 STDRDVLVALYNATDGATWKNKTNWNTGADLSQWHGIEADDQGRVVKLNLASNNLGGFIPKELGDLSELQ 72
            STDRD LVALY+ATDGA WK+K NWNT   L +W G+EA+DQGRVV L+L  N L G IP +LG LS LQ
Sbjct:  110 STDRDALVALYDATDGANWKSKQNWNTDLPLGRWRGVEANDQGRVVGLDLPDNKLHGHIPSDLGHLSALQ 179
[Close]
BLAST of mRNA_P-littoralis_Contig1135.3.2 vs. uniprot
Match: A0A6H5JX36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX36_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 2.920e-20
Identity = 42/60 (70.00%), Postives = 45/60 (75.00%), Query Frame = 0 
Query:    1 MASTDRDVLVALYNATDGATWKNKTNWNTGADLSQWHGIEADDQGRVVKLNLASNNLGGF 60
            MASTDRD LVALYNAT+G  W    NWNTGA LSQWHG+  +DQGRVV L LA NNL G 
Sbjct:    1 MASTDRDALVALYNATEGGRWSTNRNWNTGAPLSQWHGVHVNDQGRVVALELAENNLQGI 60
[Close]
BLAST of mRNA_P-littoralis_Contig1135.3.2 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 5.590e-20
Identity = 49/72 (68.06%), Postives = 58/72 (80.56%), Query Frame = 0 
Query:    1 MASTDRDVLVALYNATDGATWKNKTNWNTGADLSQWHGIEADDQGRVVKLNLASNNLGGFIPKELGDLSELQ 72
            MASTDRDVLVALYNAT+GA W+N  NW T ADLSQW G+  + QGRVV+L+L+ NNL G IP ELG+L+ LQ
Sbjct:    1 MASTDRDVLVALYNATEGANWQNSINWGTDADLSQWFGVTVNHQGRVVRLDLSFNNLRGHIPPELGNLAALQ 72
[Close]
BLAST of mRNA_P-littoralis_Contig1135.3.2 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 6.550e-20
Identity = 44/72 (61.11%), Postives = 50/72 (69.44%), Query Frame = 0 
Query:    1 MASTDRDVLVALYNATDGATWKNKTNWNTGADLSQWHGIEADDQGRVVKLNLASNNLGGFIPKELGDLSELQ 72
            MA TDRD LVALY AT G  W+   NW+T ADL  WHG++ +DQGRVVKL L  NNL G IP  LG L+ LQ
Sbjct:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQ 72
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1135.3.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHD4_ECTSI1.020e-10653.33Putative leucine rich repeat protein n=1 Tax=Ectoc... [more]
A0A6H5K655_9PHAE3.350e-9549.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIZ7_9PHAE6.330e-9250.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKS5_ECTSI2.450e-2373.61LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5KVC7_9PHAE3.500e-2168.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFK2_ECTSI8.650e-2169.44Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5K8T5_9PHAE1.730e-2065.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JX36_9PHAE2.920e-2070.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJV1_ECTSI5.590e-2068.06LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JK91_9PHAE6.550e-2061.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 284..310
e-value: 54.0
score: 9.6
coord: 92..118
e-value: 390.0
score: 2.6
coord: 140..161
e-value: 570.0
score: 1.2
coord: 188..211
e-value: 200.0
score: 4.9
coord: 212..238
e-value: 63.0
score: 9.0
NoneNo IPR availablePANTHERPTHR48062RECEPTOR-LIKE PROTEIN 14coord: 100..183
coord: 167..254
coord: 247..332
NoneNo IPR availablePANTHERPTHR48062:SF9LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3coord: 100..183
coord: 167..254
coord: 247..332
NoneNo IPR availablePANTHERPTHR48062RECEPTOR-LIKE PROTEIN 14coord: 195..278
coord: 49..134
coord: 121..206
NoneNo IPR availablePANTHERPTHR48062:SF9LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3coord: 195..278
NoneNo IPR availablePANTHERPTHR48062:SF9LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3coord: 49..134
coord: 121..206
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 47..334
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 68..91
e-value: 140.0
score: 3.7
coord: 116..139
e-value: 49.0
score: 7.6
coord: 284..308
e-value: 36.0
score: 8.7
coord: 140..164
e-value: 14.0
score: 12.1
coord: 92..115
e-value: 53.0
score: 7.3
coord: 188..211
e-value: 13.0
score: 12.4
coord: 212..236
e-value: 13.0
score: 12.2
coord: 260..283
e-value: 36.0
score: 8.7
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 142..201
e-value: 9.8E-7
score: 28.5
coord: 262..321
e-value: 7.3E-7
score: 28.8
coord: 78..129
e-value: 9.6E-7
score: 28.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 163..231
e-value: 1.5E-22
score: 81.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 232..353
e-value: 4.0E-33
score: 116.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 3..160
e-value: 4.9E-47
score: 161.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1135contigP-littoralis_Contig1135:19204..31590 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1135.3.2mRNA_P-littoralis_Contig1135.3.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig1135 17938..58482 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1135.3.2 ID=prot_P-littoralis_Contig1135.3.2|Name=mRNA_P-littoralis_Contig1135.3.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=712bp
MASTDRDVLVALYNATDGATWKNKTNWNTGADLSQWHGIEADDQGRVVKL
NLASNNLGGFIPKELGDLSELQQLDLFCNRLTGSIPRELGGLSKLEELRL
SLNRLTGSIPRELGGLSKLERLRLSNNKLTGPIPPELGALKELTTLVLNN
NQLTGAIPKELGALGRLEKLSLSINKLTGPIPKELGTLTKLERLWLHNNQ
LSGSIPRELGGLSKLELLWLSNNKLTGPIPPELGNLASLRFLELDHNELS
GPIPPELGNLASLRSLELHYNKLSGSIPRELGGLSKLERLWLSKNKLTGA
VPAHLLKLDHLQDLHIGGNKLSGPVPSLKQLRDLGHALGSSGDKHKESSM
MKKHKFNAKMIGHDSDEVTSARMAEDISDFEGDVMAWSIGEDAVVLQSPG
FEFELEVPYLGRNVPALIGRCSSSAEVVDGKQCLLHPALRCLARAGETFD
PPLRLRFAVGDLDSMESGSDIGSQRDEVAYRTHLRSAFSALTREDARSEW
IPIDGDIVRLEGGVFALEVALSHFCAFALRQDVNVRPGEFKLVPVPRLKH
ESRKSHYQFFNLGSETLVVHLWGVPQLKSFWDYFKLKVGLGATGGDVDVE
VNRTRVRNPSTEPYMMPVPPIDGTKISFCQRAHDPKELWRVVWTTQKRIS
PLIGAGYDEVQIWGSTTMTYKNAVVFGPLREGAMPQIRNFRVDDGHNVSR
RVKSVMEGSGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf