mRNA_P-littoralis_Contig1135.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1135.1.1 vs. uniprot
Match: D7G319_ECTSI (FirrV-1-A34 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G319_ECTSI) HSP 1 Score: 82.0 bits (201), Expect = 2.070e-18 Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 1
Query: 10 VRDALCTRLGGLPEVLTPSGSIDVLTKTEVIEVKHYRSWKGGLGQVISYGVHFPFRKKRLHLF 198
VRDAL + +GG PEV TP+G+IDVL+ TEVIEVK+Y+ WK GLGQV++Y P KRLHLF
Sbjct: 55 VRDALASLVGGEPEVETPAGNIDVLSGTEVIEVKYYKQWKHGLGQVLAYHCFHPSLAKRLHLF 117
BLAST of mRNA_P-littoralis_Contig1135.1.1 vs. uniprot
Match: A0A6H5JJP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP2_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 4.950e-18 Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = 1
Query: 1 EHSVRDALCTRLGGLPEVLTPSGSIDVLTKTEVIEVKHYRSWKGGLGQVISYGVHFPFRKKRLHLF 198
E VRDAL + +GG EV TPSG IDVL++TEVIEVK+YR WK GLGQV++Y H+P +RLHLF
Sbjct: 284 ECVVRDALASLVGGTTEVETPSGYIDVLSETEVIEVKYYRQWKDGLGQVLAYQSHYPRLARRLHLF 349
BLAST of mRNA_P-littoralis_Contig1135.1.1 vs. uniprot
Match: D8LP52_ECTSI (FirrV-1-A34 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP52_ECTSI) HSP 1 Score: 83.6 bits (205), Expect = 7.700e-18 Identity = 43/66 (65.15%), Postives = 47/66 (71.21%), Query Frame = 1
Query: 1 EHSVRDALCTRLGGLPEVLTPSGSIDVLTKTEVIEVKHYRSWKGGLGQVISYGVHFPFRKKRLHLF 198
E SVRDAL +GG E TP G IDVL+ TEVIEVKHY WK GLGQV+SY H+P KRLHLF
Sbjct: 53 EKSVRDALALIVGGKTEQETPVGFIDVLSDTEVIEVKHYTLWKHGLGQVLSYQRHYPHLDKRLHLF 118
BLAST of mRNA_P-littoralis_Contig1135.1.1 vs. uniprot
Match: A0A6H5L5N7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N7_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 2.340e-17 Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 1 EHSVRDALCTRLGGLPEVLTPSGSIDVLTKTEVIEVKHYRSWKGGLGQVISYGVHFPFRKKRLHLF 198
E VRDAL +GG EV TPSG IDVL++TEVIEVK+YR+WK GLGQV+ Y H+P +RLHLF
Sbjct: 718 ECVVRDALAFVVGGTTEVETPSGYIDVLSETEVIEVKYYRNWKEGLGQVLPYQSHYPRLSRRLHLF 783
BLAST of mRNA_P-littoralis_Contig1135.1.1 vs. uniprot
Match: K7X2U1_9NOST (Uncharacterized protein n=1 Tax=Anabaena sp. 90 TaxID=46234 RepID=K7X2U1_9NOST) HSP 1 Score: 80.5 bits (197), Expect = 2.660e-17 Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 1
Query: 1 EHSVRDALCTRLGGLPEVLTPSGSIDVLTKTEVIEVKHYRSWKGGLGQVISYGVHFPFRKKRLHLF 198
E VRD L ++LGGL EV TP+G ID+LT TE+IEVK + WK GLGQV+ Y +P +KRLHLF
Sbjct: 91 EFIVRDNLKSQLGGLTEVTTPAGRIDLLTDTEIIEVKRVKDWKAGLGQVLVYSGFYPEHQKRLHLF 156
BLAST of mRNA_P-littoralis_Contig1135.1.1 vs. uniprot
Match: A0A2P8QSC9_9CYAN (Uncharacterized protein n=1 Tax=Chroococcidiopsis sp. CCALA 051 TaxID=869949 RepID=A0A2P8QSC9_9CYAN) HSP 1 Score: 79.0 bits (193), Expect = 8.730e-17 Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 1
Query: 1 EHSVRDALCTRLGGLPEVLTPSGSIDVLTKTEVIEVKHYRSWKGGLGQVISYGVHFPFRKKRLHLF 198
E+ +RD L LGGL EV+TP+G ID+LT TE+IEVK + WK LGQ++ Y +P +KRLHLF
Sbjct: 87 EYQIRDRLHAELGGLVEVITPAGRIDLLTDTEIIEVKAVKDWKAALGQILVYSGFYPQHQKRLHLF 152
BLAST of mRNA_P-littoralis_Contig1135.1.1 vs. uniprot
Match: A0A1Z4UX25_9CYAN (Uncharacterized protein n=2 Tax=Sphaerospermopsis TaxID=752201 RepID=A0A1Z4UX25_9CYAN) HSP 1 Score: 79.0 bits (193), Expect = 1.090e-16 Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 1
Query: 1 EHSVRDALCTRLGGLPEVLTPSGSIDVLTKTEVIEVKHYRSWKGGLGQVISYGVHFPFRKKRLHLF 198
E VRD L ++LGGL +V TP+G ID+LT TE+IEVK + WK GLGQV+ Y +P +KRLHLF
Sbjct: 93 EFIVRDNLKSQLGGLTKVTTPAGRIDLLTDTEIIEVKRVKDWKAGLGQVLIYSGFYPEHQKRLHLF 158
BLAST of mRNA_P-littoralis_Contig1135.1.1 vs. uniprot
Match: D7G3S0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S0_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 1.530e-16 Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 1
Query: 1 EHSVRDALCTRLGGLPEVLTPSGSIDVLTKTEVIEVKHYRSWKGGLGQVISYGVHFPFRKKRLHLF 198
E VRDAL + G E TP+GSIDV T+ EVIE+KH+++WK G+GQV +YG H P K+RLHLF
Sbjct: 664 ERDVRDALARQTRGQTEWGTPAGSIDVFTRDEVIEIKHFKNWKSGVGQVKAYGEHHPSHKQRLHLF 729
BLAST of mRNA_P-littoralis_Contig1135.1.1 vs. uniprot
Match: UPI001D2F14B2 (hypothetical protein n=1 Tax=Waterburya agarophytonicola TaxID=2886916 RepID=UPI001D2F14B2) HSP 1 Score: 77.4 bits (189), Expect = 1.920e-16 Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 1
Query: 1 EHSVRDALCTRLGGLPEVLTPSGSIDVLTKTEVIEVKHYRSWKGGLGQVISYGVHFPFRKKRLHLF 198
E RD L L G EV PSG ID+LT ++IEVKH + W LGQVI+YG H+P +KR+HLF
Sbjct: 63 ESYYRDKLAKSLNGQTEVRVPSGRIDILTSNQIIEVKHIKKWNAALGQVITYGYHYPNHQKRIHLF 128
BLAST of mRNA_P-littoralis_Contig1135.1.1 vs. uniprot
Match: A0A2W7B678_9CYAN (Uncharacterized protein n=1 Tax=Snowella sp. TaxID=2164131 RepID=A0A2W7B678_9CYAN) HSP 1 Score: 76.6 bits (187), Expect = 2.330e-16 Identity = 36/66 (54.55%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 1 EHSVRDALCTRLGGLPEVLTPSGSIDVLTKTEVIEVKHYRSWKGGLGQVISYGVHFPFRKKRLHLF 198
E RD L +L G EV TP+G ID+LTKTEVIEVK WK +GQ+ISYG +P ++R+HLF
Sbjct: 44 ESWYRDRLAKQLNGQVEVSTPAGRIDILTKTEVIEVKRASGWKSAIGQIISYGKFYPHHRQRIHLF 109 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1135.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1135.1.1 >prot_P-littoralis_Contig1135.1.1 ID=prot_P-littoralis_Contig1135.1.1|Name=mRNA_P-littoralis_Contig1135.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=66bp EHSVRDALCTRLGGLPEVLTPSGSIDVLTKTEVIEVKHYRSWKGGLGQVIback to top mRNA from alignment at P-littoralis_Contig1135:6337..6534- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1135.1.1 ID=mRNA_P-littoralis_Contig1135.1.1|Name=mRNA_P-littoralis_Contig1135.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=198bp|location=Sequence derived from alignment at P-littoralis_Contig1135:6337..6534- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1135:6337..6534- >mRNA_P-littoralis_Contig1135.1.1 ID=mRNA_P-littoralis_Contig1135.1.1|Name=mRNA_P-littoralis_Contig1135.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=198bp|location=Sequence derived from alignment at P-littoralis_Contig1135:6337..6534- (Pylaiella littoralis U1_48)back to top |