prot_P-littoralis_Contig1135.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1135.2.1
Unique Nameprot_P-littoralis_Contig1135.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length198
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig1135.2.1 vs. uniprot
Match: A0A6H5K2A3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A3_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 4.020e-7
Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 0 
Query:   48 KVLYSTAIAAKLREPSDEEIDQHMQRSREKTAEKPEERKGTVTRTPSERSGPTSIPLMSKLLGAGLCATPGDG-LEIAE 125
            K+  ST I A+L EP  +   + M+R RE   EK +ER GT++R  +E  G TSIP+M KLLG GLC   G G +EI++
Sbjct:  188 KLYASTKIIARLVEPWQDGSREWMERKRESGGEKAQERDGTLSRAANEPRGNTSIPVMVKLLGDGLCTDQGKGDIEISD 266
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1135.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K2A3_9PHAE4.020e-746.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1135contigP-littoralis_Contig1135:14952..15545 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1135.2.1mRNA_P-littoralis_Contig1135.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1135 14651..15557 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1135.2.1 ID=prot_P-littoralis_Contig1135.2.1|Name=mRNA_P-littoralis_Contig1135.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=198bp
MDVDCGGGGGGDDNGPEAMDDTENEVGDGYGGVGGVGGVRKKRDGFGKVL
YSTAIAAKLREPSDEEIDQHMQRSREKTAEKPEERKGTVTRTPSERSGPT
SIPLMSKLLGAGLCATPGDGLEIAERGVLQACRARSPAILLRQVLRIQSA
GHWGGFRRHYRQDRWQVPRREIVRSRQVQAGRSRIDTYPMGASARPV*
back to top