prot_P-littoralis_Contig1133.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1133.1.1
Unique Nameprot_P-littoralis_Contig1133.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length457
Homology
BLAST of mRNA_P-littoralis_Contig1133.1.1 vs. uniprot
Match: D7FK13_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK13_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 5.970e-79
Identity = 143/253 (56.52%), Postives = 183/253 (72.33%), Query Frame = 0
Query:  113 LKRVSIVDKITPLTVLTSLVSDFDVAADWYFFKDGLEGQPQLLFRFALAFTVIGTIMYILLTLEFHPITKVQGWWA-GKSLSPLQHVPLGWQLAINVMVEDIPQLIITWIASPDSVAGALNIATAGFSLLAKIAEAVATRRDLPMSSQFRMVEEDPGVVRHMMVERRNLEKLAASAAELAVLVNECRQES-------DLRRQRALAFGIMH---------LTYIREKLDISVLDLAWSRLTGPIPPTLGDLTQ 348
            LKR +I +K+TPLTVLTS+VSD D+ ADWYF ++GLE   +L+   A   TV+GT+MY+LLTLEFHP+++   W   G++LSPLQHVPLGWQL +NV+VEDIPQL+ITW+ SP SVAG LNIATAGF+LLAK+AE  ATR DLPMSSQ RM++ DPGVV+H++  R   E+LAA+AA LAVLVN    E+       + +R  A AF +M          L YIREKL++S L+L    L G +PP+LGD+ Q
Sbjct:  125 LKRSAIWEKVTPLTVLTSVVSDLDLFADWYFLQEGLEDAQELVADVAFVLTVVGTVMYVLLTLEFHPVSEAWTWCRRGRALSPLQHVPLGWQLLLNVVVEDIPQLVITWVTSPTSVAGVLNIATAGFALLAKMAEGFATRTDLPMSSQLRMIDTDPGVVQHLLNARHKAEELAANAASLAVLVNRFGAENAAMPTERNSKRLLATAFQVMQVDPGFLNGELGYIREKLEVSRLNLGRFGLKGSLPPSLGDVLQ 377          
BLAST of mRNA_P-littoralis_Contig1133.1.1 vs. uniprot
Match: D7G1J8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J8_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 4.590e-44
Identity = 102/254 (40.16%), Postives = 149/254 (58.66%), Query Frame = 0
Query:  108 REEHQLKRVSIVDKITPLTVLTSLVSDFDVAADWYFFKDGLEGQPQLLFRFALAFTVIGTIMYILLTLEFHPITKVQGWWAGKSLSPLQHVPLGWQLAINVMVEDIPQLIITWIASPDSVAGALNIATAGFSLLAKIAEAVATRRDLPMSSQFRMVEEDPGVVRHMMVERRNLEKLAASAAELAVLV--NECRQESDLRRQRALAFGIMHL--TYIREKLDISVLDL--------AWSRLTGPIPPTLGDLTQL 349
            ++   LKR +I+ +ITP+ +L+S V D D+  DW F K GL GQ  L+ + AL F ++GT+M+ L T EF  ++K++  W G  LS LQHV LGWQL  NV +ED+PQ IIT I  P SV G LN+  +G SL AKI    +++R   +S+QF+M+++DP V R++   R   +K A +A +L  L   N C   S   ++ A  F ++ +  T++   L+    DL          S LTGPIP  +GD+T L
Sbjct:  149 KDRQVLKRRTILSRITPIVLLSSFVGDLDLITDWTFLKYGLAGQGFLIRKLALFFAIVGTVMWALSTTEFSLMSKLKNMWKGNPLSRLQHVGLGWQLLANVFLEDVPQFIITVITRPTSVTGVLNLCASGLSLCAKIVHGYSSQRAPSLSTQFKMIDQDPAVTRNLFKLRDEAKKKAKAAEKLVYLAWANRC---STGEQKAAAVFQVLQMDPTFVGGDLEYMRADLFSGSRLYITASSLTGPIPSQVGDMTIL 399          
BLAST of mRNA_P-littoralis_Contig1133.1.1 vs. uniprot
Match: A0A6H5JNU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNU7_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 1.860e-32
Identity = 73/177 (41.24%), Postives = 109/177 (61.58%), Query Frame = 0
Query:  108 REEHQLKRVSIVDKITPLTVLTSLVSDFDVAADWYFFKDGLEGQPQ-----------LLFRFALAFTVIGTIMYILLTLEFHPITKVQGWWAGKSLSPLQHVPLGWQLAINVMVEDIPQLIITWIASPDSVAGALNIATAGFSLLAKIAEAVATRRDLPMSSQFRMVEEDPGVVRHM 273
            ++   LKR +I+ +ITP+ +L+S V D D+  DW F K GL GQ +           L+ + AL F ++GT+M+ L T EF  ++K++  W       LQHV LGWQL  NV +ED+PQ IIT I  P SV G LN+  +G SL AKI   ++++R   +S+QF+M+++DP V R++
Sbjct:  199 KDRQVLKRRTILSRITPIVLLSSFVGDLDLITDWMFLKYGLAGQGENTKAEGCLQRFLIRKLALFFAIVGTVMWALSTTEFSLMSKLKNMW-----KVLQHVGLGWQLLANVFLEDVPQFIITVITRPTSVTGVLNLCASGLSLCAKIIHGISSQRAPSLSTQFKMIDQDPAVTRNL 370          
BLAST of mRNA_P-littoralis_Contig1133.1.1 vs. uniprot
Match: A0A836CEJ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEJ4_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.170e-6
Identity = 31/79 (39.24%), Postives = 51/79 (64.56%), Query Frame = 0
Query:  111 HQLKRVSIVDKITPLTVLTSLVSDFDVAADWYFFKD-----GLEGQPQLL--FRFALAFTVIGTIMYILLTLEFHPITK 182
            +++K+  I  K+ PLTV+ S+ +D D A+DW FF D     G    P ++  ++ ALAFTV+GT++++L+  EFHP+  
Sbjct:   36 NEMKKRIIDKKLDPLTVIASIAADLDAASDWAFFYDLGHRSGGAAYPHVMRMYKAALAFTVVGTLIWLLVWSEFHPVAS 114          
BLAST of mRNA_P-littoralis_Contig1133.1.1 vs. uniprot
Match: A0A835Z2C3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2C3_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 2.790e-5
Identity = 31/81 (38.27%), Postives = 47/81 (58.02%), Query Frame = 0
Query:  108 REEHQLKRVSIVDKITPLTVLTSLVSDFDVAADWYFFKD----GLEGQPQL--LFRFALAFTVIGTIMYILLTLEFHPITK 182
            R   Q+K   I  K+ PL+++ S  +D D A+DW F  D         PQ   +F+ ALAFTV+GT++++L+  EFHP+  
Sbjct:  121 RSAKQMKEQIIDKKLDPLSLIASFAADLDAASDWAFVYDLGHRPASAYPQTASMFKAALAFTVVGTVIWLLVFSEFHPLVS 201          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1133.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FK13_ECTSI5.970e-7956.52Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
D7G1J8_ECTSI4.590e-4440.16Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JNU7_9PHAE1.860e-3241.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CEJ4_9STRA1.170e-639.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z2C3_9STRA2.790e-538.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 394..418
e-value: 9.1
score: 13.6
coord: 346..370
e-value: 9.4
score: 13.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 315..457
e-value: 9.2E-47
score: 161.5
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 396..455
e-value: 8.8E-10
score: 38.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..54
NoneNo IPR availablePANTHERPTHR48058LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2-RELATEDcoord: 325..457
coord: 318..413
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 324..457

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1133contigP-littoralis_Contig1133:212..31310 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1133.1.1mRNA_P-littoralis_Contig1133.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1133 212..51596 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1133.1.1 ID=prot_P-littoralis_Contig1133.1.1|Name=mRNA_P-littoralis_Contig1133.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=457bp
MLRLVYLAFLYWWYEGSLSSIKEELPGESPNQGSAVTSSAPAPDASSEGN
TASRGNIPPPAPAAGSQLQHLPLSPSAAALGNAERGAQSSSERGRGGARN
ARVDDKVREEHQLKRVSIVDKITPLTVLTSLVSDFDVAADWYFFKDGLEG
QPQLLFRFALAFTVIGTIMYILLTLEFHPITKVQGWWAGKSLSPLQHVPL
GWQLAINVMVEDIPQLIITWIASPDSVAGALNIATAGFSLLAKIAEAVAT
RRDLPMSSQFRMVEEDPGVVRHMMVERRNLEKLAASAAELAVLVNECRQE
SDLRRQRALAFGIMHLTYIREKLDISVLDLAWSRLTGPIPPTLGDLTQLT
ELSLGGNDLTGSIPAELGQLTALVYLDLRANGLTGSIPEELGGLTALTQL
DLQRNKLTGSIPAKLGRLTALKYLNIESNKLTGPIPSTLGDLTQLTELRL
DGNLLSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt