prot_P-littoralis_Contig1132.18.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1132.18.1
Unique Nameprot_P-littoralis_Contig1132.18.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length513
Homology
BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Match: D7G8W9_ECTSI (CPSF_A domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W9_ECTSI)

HSP 1 Score: 480 bits (1235), Expect = 1.430e-166
Identity = 232/245 (94.69%), Postives = 240/245 (97.96%), Query Frame = 0
Query:  268 NRWDPKTCTLELIGFHDPRIYVTSLSVIKNRFILVGDVYGSVQLVVWREEDHSLTALSKDHEDCEVFSTEYLIDEPGMAIVVADGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRTRGNLRDGARYCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRGYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLASLF 512
            +RWDPKTCTLELIGFHDPR+YV SLSVIK++FILVGD YGSVQLVVWREEDHSLTALSKDHEDC+VFS EYLIDEPGMAIVVADGRRN+KVLQYAPNATNSRGGTKLLCQSDFYLGSRV KLTRRRTRGNLRDGARYCLLAGTLDGGLGA+LPVDERVFRRLYALQGIMSNALGHNGAANPR YRLFDHGPTFRYETKQNMLDGSLLWRFVGLDA+TQHDLTRAIGTTVDRVMANLLDIDLASLF
Sbjct:   11 SRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDFYLGSRVGKLTRRRTRGNLRDGARYCLLAGTLDGGLGAVLPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 255          
BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Match: D7G8W8_ECTSI (Cleavage and polyadenylation specificity factor CG10110-PA n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W8_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 1.520e-74
Identity = 187/264 (70.83%), Postives = 202/264 (76.52%), Query Frame = 0
Query:    1 MEDALAEQPKAGLPKGDE-EQGDGDXXXXXXAAGFLDRHVVKHKNWTVADPALGGAPPLLVPRFELRVLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGGIIGKEAGGDGEDGQGGGQGTDVPGSEA-SLLLSAAVVESHPMDSDENCICMTLVRLEQGGSPRMYVAVGTGMNEPQGEDKAARGRLLLFEVDYAYRAREEGKHEHAVKLKQVFAKEQLGPVSGESG---PVSAVAQLGRHLVL 259
            MEDAL  QPK+GL +G+E EQGDGDXXXXX AAG LDRH VKHKNWTVADP+LGGAPPLLVPRFELRVLAL       XXXXXXXXXXXXXXXXXXXXXXXX                     G+ +GG G+DG        VPG+EA +L+LSAAVVESHPMDSDEN +CMTLVRLEQGG+PRMYVAVGTGMNEPQGEDKAARGRL+L EVDYAY ARE+GKHEHAVKL+QVFAKEQLGPVSGE     P S       HLVL
Sbjct: 1658 MEDALVAQPKSGLKEGEEGEQGDGDXXXXXEAAGLLDRHTVKHKNWTVADPSLGGAPPLLVPRFELRVLALAPGAVSAXXXXXXXXXXXXXXXXXXXXXXXXTPEEGE---------------GRRSGGRGQDGS-------VPGNEAEALMLSAAVVESHPMDSDENGVCMTLVRLEQGGAPRMYVAVGTGMNEPQGEDKAARGRLILLEVDYAYLAREDGKHEHAVKLRQVFAKEQLGPVSGEWSIFFPFSTSLPEVFHLVL 1899          
BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Match: A0A835Z873_9STRA (Cleavage/polyadenylation specificity factor, A subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z873_9STRA)

HSP 1 Score: 245 bits (626), Expect = 2.220e-74
Identity = 120/268 (44.78%), Postives = 175/268 (65.30%), Query Frame = 0
Query:  244 SGPVSAVAQLGRHLVLSVGKKVIVNRWDPKTCTLELIGFHDPRIYVTSLSVIKNRFILVGDVYGSVQLVVWREEDHSLTALSKDHEDCEVFSTEYLIDEPGMAIVVADGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRTRGNLRDGARYCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRGYRLFDH----GPTFRYETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDID 507
            +GPV AVAQ+ R++  +    + +  WDPK+ +L  +G ++   YV ++SV+K  F+++GDV  SVQ ++WR+ED S+  L+KD+E  +V++T +L+D+P + IVV D   NIK+L+YAP    SRGG +L+C +DF++G+ V     +R R N  +  R+    G LDG +  + P++ER FRRLYALQG+M NAL H    NPRG RLF               + +LDG+LLWRFV L A+ Q +LTRAIGTTVD V+ +LLD+D
Sbjct:    3 AGPVGAVAQISRYVATAAAASITILEWDPKSDSLRPVGIYEASQYVVTMSVVKT-FLVLGDVMNSVQFLMWRDEDRSINQLAKDYEPTQVYATVFLVDQPSLGIVVGDSSGNIKILRYAPQLLASRGGHRLVCDADFHIGAPVGAFGPQRLRNNKLNAPRFGAAVGGLDGSVALLAPLEERAFRRLYALQGVMCNALEHGAGVNPRGARLFRSQLPAAAAAEGGRMKGVLDGALLWRFVSLPAQVQCELTRAIGTTVDAVLLSLLDVD 269          
BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Match: A0A2D4CF34_PYTIN (CPSF_A domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF34_PYTIN)

HSP 1 Score: 221 bits (563), Expect = 9.630e-64
Identity = 131/348 (37.64%), Postives = 199/348 (57.18%), Query Frame = 0
Query:  184 YVAVGTGMNEPQGEDKAARGRLLLFEVDYAYRAREEGKHEHAV-KLKQVFAKEQLGPVSGESGPVSAVAQLGRHLVLSVGKKVIVNRWDPKTCTLELIGFHDPRIYVTSLSVIKNRFILVGDVYGSVQLVVWREEDHSLTALSKDHEDCEVFSTEYLIDEPGMAIVVADGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRTRGNLRDGAR---------------YCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRGYRLFDHGPTFR---------YETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDI 506
            YV +GTG   P GED++ +GRLLL+E+DYA     EG+    + KL+ +F KE         G +S V+QLG H++ +VG K+IV  ++ K+  L    F+D ++Y+ SLSVIK+ +++  DVY SV  + WRE+   L  L+KD+E   + +TE+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG ++  + R+ T  +    A+               Y  L G+ +G +GAI+ V ERVFRRL+ LQ +M N L  N A NPR +R+       R          + K+  LDG +L+RF+ LD   Q +L R IGTT + ++ NLL++
Sbjct:   29 YVVIGTGFVGPHGEDESGKGRLLLYELDYAQYTTAEGETSAKLPKLRLIFIKEH------HHGAISFVSQLGPHVLAAVGMKLIV--YEFKSDQLTACAFYDAQMYIVSLSVIKD-YVMYADVYKSVHFLRWREKQRQLQLLAKDYEPLAITATEFSVAEKKLALLAGDMEENLHVMQFAPQDIESRGGQRLLRTSDFHLGVQITSMIRKATGTSNPPAAQMAGHRKHQEQPSQSQYVTLLGSSEGSVGAIMAVGERVFRRLFTLQNVMINTLPQNCALNPREFRMMKSNGGRRTGRPDAWCKQKWKKGFLDGHVLFRFLHLDYVAQKELARCIGTTPEVIIHNLLEV 367          
BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Match: A0A662X1P8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X1P8_9STRA)

HSP 1 Score: 228 bits (582), Expect = 2.440e-61
Identity = 140/352 (39.77%), Postives = 209/352 (59.38%), Query Frame = 0
Query:  182 RMYVAVGTGMNEPQGEDKAARGRLLLFEVDYAYRAREEGKHEHAV--KLKQVFAKEQLGPVSGESGPVSAVAQLGRHLVLSVGKKVIVNRWDPKTCTLELIG--FHDPRIYVTSLSVIKNRFILVGDVYGSVQLVVWREEDHSLTALSKDHEDCEVFSTEYLIDEPGMAIVVADGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRT-------RGNLRDGAR---YCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRGYRLFDHGPTFR---------YETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLAS 510
            R Y+ +GTG   P GED++ RGRLLL+E+DYA   +EEG        KL+ VF KE         G +S VAQLG +++ +VG K+IV  +  +    +LIG  F+D ++++ SLSV+++ F++ GDV+ SV  + W+E+   LT L+KD+E   V +TE+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG +VA + R+R        R N R  A    Y  + G  +GG+GA++PV ERVFRRL+ LQ +M N L  N A NPR +R+       R         ++ K++ LD  +L+RF+ LD   Q +L R IGTT + V+ NLL++  A+
Sbjct: 1440 RPYLVIGTGCVGPHGEDESGRGRLLLYELDYAQYVKEEGGTTSGKLPKLRLVFIKEH------RQGAISMVAQLGPYVLAAVGSKLIVYEFKSE----QLIGCAFYDAQMFIVSLSVVRD-FVMYGDVFKSVHFLRWKEKQRQLTLLAKDYEPLAVSTTEFNVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRTSDFHLGVQVASMFRKRVDTGGQMVRTNGRASAPPGYYVNVLGNSEGGVGALIPVGERVFRRLFTLQNVMINTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKHKWKKSFLDAFVLFRFLRLDYVAQKELARCIGTTPEVVIHNLLEVQRAT 1780          
BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Match: A0A833S4Z4_PHYIN (CPSF A subunit region n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833S4Z4_PHYIN)

HSP 1 Score: 228 bits (581), Expect = 3.220e-61
Identity = 142/353 (40.23%), Postives = 206/353 (58.36%), Query Frame = 0
Query:  182 RMYVAVGTGMNEPQGEDKAARGRLLLFEVDYAYRAREEGKHEHAV--KLKQVFAKEQLGPVSGESGPVSAVAQLGRHLVLSVGKKVIVNRWDPKTCTLELIG--FHDPRIYVTSLSVIKNRFILVGDVYGSVQLVVWREEDHSLTALSKDHEDCEVFSTEYLIDEPGMAIVVADGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRR----------TRG-NLRDGARYCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRGYRLFDHGPTFRY---------ETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLAS 510
            R Y+ VGTG   P GED++ RGRLLL+E+DYA    EEG        KL+ VF KE         G +S V+QLG +++ +VG K+IV  +  +    +LIG  F+D ++Y+ +LSV+K+ F++ GDVY SV  + WRE    L  L+KD+E   V +TE+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG +V+ + R+R          T G N    + Y  + GT +GG+GA++PV ERVFRRL+ LQ +M N L  N A NPR +R+       R          + K++ LD  +L+RF+ LD   Q +L R IGTT + VM NLL++  A+
Sbjct: 1315 RPYLVVGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFIKEH------RQGAISMVSQLGPYVLAAVGSKLIVYEFKSE----QLIGCAFYDAQMYIVTLSVVKD-FVMYGDVYKSVHFLRWREMQRQLVLLAKDYEPLAVSATEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKRVDASGSVVSATNGRNAAPLSNYVNVMGTSEGGVGALVPVGERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVMHNLLEVQHAT 1656          
BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Match: D0NYE8_PHYIT (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=D0NYE8_PHYIT)

HSP 1 Score: 228 bits (581), Expect = 3.280e-61
Identity = 142/353 (40.23%), Postives = 206/353 (58.36%), Query Frame = 0
Query:  182 RMYVAVGTGMNEPQGEDKAARGRLLLFEVDYAYRAREEGKHEHAV--KLKQVFAKEQLGPVSGESGPVSAVAQLGRHLVLSVGKKVIVNRWDPKTCTLELIG--FHDPRIYVTSLSVIKNRFILVGDVYGSVQLVVWREEDHSLTALSKDHEDCEVFSTEYLIDEPGMAIVVADGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRR----------TRG-NLRDGARYCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRGYRLFDHGPTFRY---------ETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLAS 510
            R Y+ VGTG   P GED++ RGRLLL+E+DYA    EEG        KL+ VF KE         G +S V+QLG +++ +VG K+IV  +  +    +LIG  F+D ++Y+ +LSV+K+ F++ GDVY SV  + WRE    L  L+KD+E   V +TE+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG +V+ + R+R          T G N    + Y  + GT +GG+GA++PV ERVFRRL+ LQ +M N L  N A NPR +R+       R          + K++ LD  +L+RF+ LD   Q +L R IGTT + VM NLL++  A+
Sbjct: 1399 RPYLVVGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFIKEH------RQGAISMVSQLGPYVLAAVGSKLIVYEFKSE----QLIGCAFYDAQMYIVTLSVVKD-FVMYGDVYKSVHFLRWREMQRQLVLLAKDYEPLAVSATEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKRVDASGSVVSATNGRNAAPLSNYVNVMGTSEGGVGALVPVGERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVMHNLLEVQHAT 1740          
BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Match: A0A0P1AL14_PLAHL (Cleavage and polyadenylation specificity factor n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AL14_PLAHL)

HSP 1 Score: 228 bits (581), Expect = 3.280e-61
Identity = 142/357 (39.78%), Postives = 209/357 (58.54%), Query Frame = 0
Query:  175 LEQGGSPRMYVAVGTGMNEPQGEDKAARGRLLLFEVDYAYRAREEGKHEHAV--KLKQVFAKEQLGPVSGESGPVSAVAQLGRHLVLSVGKKVIVNRWDPKTCTLELIG--FHDPRIYVTSLSVIKNRFILVGDVYGSVQLVVWREEDHSLTALSKDHEDCEVFSTEYLIDEPGMAIVVADGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRTRG-----NLRDGAR---YCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRGYRLFDHGPTFRY---------ETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLAS 510
            +E     R YV +GTG   P GED++ RGRLLL+E+DYA    EEG        KL+ VF KE         G +SAVAQLG +++ +VG K+IV  +  +    +LIG  F+D ++Y+ +L+VIK+ FI+ GDVY SV  + WRE    L  L+KD+E   V +TE+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG +V+ + R++        N ++GA    Y  + GT +GG+ A++PV ERVFRRL+ LQ +M N L  N A NPR +R+       R          + K++ LD  +L++F+ LD   Q +L R IGTT + V+ NLL++  A+
Sbjct: 1407 MEWNKKKRPYVVIGTGCVGPHGEDESGRGRLLLYELDYAQYVNEEGGTTSGKLPKLRLVFIKEH------RQGAISAVAQLGPYVLAAVGSKLIVYEFKSE----QLIGCAFYDAQMYIVTLNVIKD-FIMYGDVYKSVHFLRWREMQRQLLLLAKDYEPLAVSATEFSVYEKRLALLAVDMDENMHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKQVDAVVSGTNRQEGAFPLCYVNILGTSEGGVSALVPVSERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAELRCGRSDGWSKKKWKKSFLDALVLFQFLQLDYVAQKELARCIGTTPEVVIHNLLEVQHAT 1752          
BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Match: A0A1V9ZXF6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXF6_9STRA)

HSP 1 Score: 227 bits (578), Expect = 7.760e-61
Identity = 130/337 (38.58%), Postives = 197/337 (58.46%), Query Frame = 0
Query:  184 YVAVGTGMNEPQGEDKAARGRLLLFEVDYAYRAREEGKHEHAV-KLKQVFAKEQLGPVSGESGPVSAVAQLGRHLVLSVGKKVIVNRWDPKTCTLELIGFHDPRIYVTSLSVIKNRFILVGDVYGSVQLVVWREEDHSLTALSKDHEDCEVFSTEYLIDEPGMAIVVADGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRTRGNLRDGARYCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRGYRLFDHGPTF-------RYETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLASLF 512
            YV +GTG+  P GED+  +GRLL++E+DYA      G   + V KLK ++AKE       + G +S V QLG +++ +VG K+IV  ++ K   L    F D ++Y+ SL+VIK+ FIL GD+Y S   + W   +  L  L+KD E+  V STE  + +  + +V +D   N+ V+Q+ P++  SRGG +LL  SDF++G+R+  + R+R    +   A Y  L  T +GG+  + PV E+ FRRLY LQ IM NAL HN   NPR +R   H           +++ K+  LD +++ R++ LD   Q +L R IGTT D V+ NLL++  ++LF
Sbjct: 1203 YVVIGTGIVSPNGEDENGKGRLLVYEIDYAQYTDVHGVTGNKVPKLKLIYAKEH------KQGAISMVKQLGIYVLAAVGSKLIV--YELKNNQLVGCAFFDAQLYIVSLNVIKSTFILYGDIYKSTYFLQWNPTEKRLVLLAKDFENLNVVSTEISVLDSRLGVVASDMLSNLHVMQFVPSSIESRGGQRLLRTSDFHVGARITTMLRKRLESKI---AIYVTLLATAEGGVNVLTPVYEKSFRRLYTLQTIMINALPHNAGLNPREFRQALHNQLTGRQDAWCKWKGKKAFLDMAVIGRYIDLDYVAQRELARCIGTTADVVLHNLLELQRSTLF 1528          
BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Match: H3GUH2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GUH2_PHYRM)

HSP 1 Score: 227 bits (578), Expect = 8.190e-61
Identity = 140/352 (39.77%), Postives = 207/352 (58.81%), Query Frame = 0
Query:  182 RMYVAVGTGMNEPQGEDKAARGRLLLFEVDYAYRAREEGKHEHAV-KLKQVFAKEQLGPVSGESGPVSAVAQLGRHLVLSVGKKVIVNRWDPKTCTLELIG--FHDPRIYVTSLSVIKNRFILVGDVYGSVQLVVWREEDHSLTALSKDHEDCEVFSTEYLIDEPGMAIVVADGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRTRG--------NLRDGAR---YCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRGYRLFDHGPTFRY---------ETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLAS 510
            R Y+ +GTG   P GED++ RGRLLL+E+DYA    EEG     + KL+ VF KE         G +SAV QLG +++ +VG KVIV  +  +    +LIG  F+D ++++ +L+V+K+ F++ GDVY SV  + WRE+   L  L+KD+E   V +TE+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG +VA + R+R           N R  A    Y  + G+ +GG+GA++PV ERVFRRL+ LQ +M N L  N A NPR +R+       R          + K++ LD  +L+RF+ LD   Q +L R IGTT + V+ NLL++  A+
Sbjct: 1431 RPYLVIGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGASGKLPKLRLVFIKEH------RQGAISAVTQLGPYVLAAVGSKVIVYEFKSE----QLIGCAFYDAQMFIVTLNVVKD-FVMYGDVYKSVHFLRWREKQRQLVLLAKDYEPLAVSTTEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVASMFRKRVDAHGPVVPATNGRPSALPSFYVNVMGSSEGGVGALIPVSERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQQRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVIHNLLEVQHAT 1771          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8W9_ECTSI1.430e-16694.69CPSF_A domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G8W8_ECTSI1.520e-7470.83Cleavage and polyadenylation specificity factor CG... [more]
A0A835Z873_9STRA2.220e-7444.78Cleavage/polyadenylation specificity factor, A sub... [more]
A0A2D4CF34_PYTIN9.630e-6437.64CPSF_A domain-containing protein n=1 Tax=Pythium i... [more]
A0A662X1P8_9STRA2.440e-6139.77Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A833S4Z4_PHYIN3.220e-6140.23CPSF A subunit region n=2 Tax=Phytophthora infesta... [more]
D0NYE8_PHYIT3.280e-6140.23Uncharacterized protein n=18 Tax=Phytophthora TaxI... [more]
A0A0P1AL14_PLAHL3.280e-6139.78Cleavage and polyadenylation specificity factor n=... [more]
A0A1V9ZXF6_9STRA7.760e-6138.58Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
H3GUH2_PHYRM8.190e-6139.77Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004871Cleavage/polyadenylation specificity factor, A subunit, C-terminalPFAMPF03178CPSF_Acoord: 154..477
e-value: 2.2E-59
score: 201.4
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 71..419
e-value: 1.6E-58
score: 200.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..106
NoneNo IPR availablePANTHERPTHR10644:SF2CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1coord: 105..501
NoneNo IPR availablePANTHERPTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILYcoord: 105..501

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1132contigP-littoralis_Contig1132:53155..65278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1132.18.1mRNA_P-littoralis_Contig1132.18.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1132 52361..66691 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1132.18.1 ID=prot_P-littoralis_Contig1132.18.1|Name=mRNA_P-littoralis_Contig1132.18.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=513bp
MEDALAEQPKAGLPKGDEEQGDGDDDEEEEAAGFLDRHVVKHKNWTVADP
ALGGAPPLLVPRFELRVLALAAAATASSSPAAATAAGTSSSSAQDEGDDD
GATASASASASAAAAAAEGGIIGKEAGGDGEDGQGGGQGTDVPGSEASLL
LSAAVVESHPMDSDENCICMTLVRLEQGGSPRMYVAVGTGMNEPQGEDKA
ARGRLLLFEVDYAYRAREEGKHEHAVKLKQVFAKEQLGPVSGESGPVSAV
AQLGRHLVLSVGKKVIVNRWDPKTCTLELIGFHDPRIYVTSLSVIKNRFI
LVGDVYGSVQLVVWREEDHSLTALSKDHEDCEVFSTEYLIDEPGMAIVVA
DGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRTRGNLRD
GARYCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRG
YRLFDHGPTFRYETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVM
ANLLDIDLASLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004871Cleavage/polyA-sp_fac_asu_C
IPR015943WD40/YVTN_repeat-like_dom_sf