mRNA_P-littoralis_Contig1132.18.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1132.18.1
Unique NamemRNA_P-littoralis_Contig1132.18.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Match: D7G8W9_ECTSI (CPSF_A domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W9_ECTSI)

HSP 1 Score: 480 bits (1236), Expect = 6.790e-162
Identity = 232/245 (94.69%), Postives = 240/245 (97.96%), Query Frame = 3 
Query: 1047 NRWDPKTCTLELIGFHDPRIYVTSLSVIKNRFILVGDVYGSVQLVVWREEDHSLTALSKDHEDCEVFSTEYLIDEPGMAIVVADGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRTRGNLRDGARYCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRGYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLASLF 1781
            +RWDPKTCTLELIGFHDPR+YV SLSVIK++FILVGD YGSVQLVVWREEDHSLTALSKDHEDC+VFS EYLIDEPGMAIVVADGRRN+KVLQYAPNATNSRGGTKLLCQSDFYLGSRV KLTRRRTRGNLRDGARYCLLAGTLDGGLGA+LPVDERVFRRLYALQGIMSNALGHNGAANPR YRLFDHGPTFRYETKQNMLDGSLLWRFVGLDA+TQHDLTRAIGTTVDRVMANLLDIDLASLF
Sbjct:   11 SRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDFYLGSRVGKLTRRRTRGNLRDGARYCLLAGTLDGGLGAVLPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 255
[Close]
BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Match: D7G8W8_ECTSI (Cleavage and polyadenylation specificity factor CG10110-PA n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W8_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 1.830e-100
Identity = 232/314 (73.89%), Postives = 248/314 (78.98%), Query Frame = 3 
Query:   96 GHFVAEKVRLGATVCGLVHLPYQLAQAGKTGDILKQLLRKRGHYVALVSTMEDALAEQPKAGLPKGDE-EQGDGDXXXXXXAAGFLDRHVVKHKNWTVADPALGGAPPLLVPRFELRVLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEGGIIGKEAGGDGEDGQGGGQGTDVPGSEA-SLLLSAAVVESHPMDSDENCICMTLVRLEQGGSPRMYVAVGTGMNEPQGEDKAARGRLLLFEVDYAYRAREEGKHEHAVKLKQVFAKEQLGPVSGESG---PVSAVAQLGRHLVL 1022
            GHFVAEKVRLGATV GLVHLP+ LA AGKTGDILKQLLR RGHYVALVSTMEDAL  QPK+GL +G+E EQGDGDXXXXX AAG LDRH VKHKNWTVADP+LGGAPPLLVPRFELRVLAL       XXXXXXXXXXXXXXXXXXXXXXXX                     G+ +GG G+DG        VPG+EA +L+LSAAVVESHPMDSDEN +CMTLVRLEQGG+PRMYVAVGTGMNEPQGEDKAARGRL+L EVDYAY ARE+GKHEHAVKL+QVFAKEQLGPVSGE     P S       HLVL
Sbjct: 1608 GHFVAEKVRLGATVHGLVHLPHDLAHAGKTGDILKQLLRARGHYVALVSTMEDALVAQPKSGLKEGEEGEQGDGDXXXXXEAAGLLDRHTVKHKNWTVADPSLGGAPPLLVPRFELRVLALAPGAVSAXXXXXXXXXXXXXXXXXXXXXXXXTPEEGE---------------GRRSGGRGQDGS-------VPGNEAEALMLSAAVVESHPMDSDENGVCMTLVRLEQGGAPRMYVAVGTGMNEPQGEDKAARGRLILLEVDYAYLAREDGKHEHAVKLRQVFAKEQLGPVSGEWSIFFPFSTSLPEVFHLVL 1899
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BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Match: A0A835Z873_9STRA (Cleavage/polyadenylation specificity factor, A subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z873_9STRA)

HSP 1 Score: 245 bits (626), Expect = 2.540e-71
Identity = 120/268 (44.78%), Postives = 175/268 (65.30%), Query Frame = 3 
Query:  975 SGPVSAVAQLGRHLVLSVGKKVIVNRWDPKTCTLELIGFHDPRIYVTSLSVIKNRFILVGDVYGSVQLVVWREEDHSLTALSKDHEDCEVFSTEYLIDEPGMAIVVADGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRTRGNLRDGARYCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRGYRLFDH----GPTFRYETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDID 1766
            +GPV AVAQ+ R++  +    + +  WDPK+ +L  +G ++   YV ++SV+K  F+++GDV  SVQ ++WR+ED S+  L+KD+E  +V++T +L+D+P + IVV D   NIK+L+YAP    SRGG +L+C +DF++G+ V     +R R N  +  R+    G LDG +  + P++ER FRRLYALQG+M NAL H    NPRG RLF               + +LDG+LLWRFV L A+ Q +LTRAIGTTVD V+ +LLD+D
Sbjct:    3 AGPVGAVAQISRYVATAAAASITILEWDPKSDSLRPVGIYEASQYVVTMSVVKT-FLVLGDVMNSVQFLMWRDEDRSINQLAKDYEPTQVYATVFLVDQPSLGIVVGDSSGNIKILRYAPQLLASRGGHRLVCDADFHIGAPVGAFGPQRLRNNKLNAPRFGAAVGGLDGSVALLAPLEERAFRRLYALQGVMCNALEHGAGVNPRGARLFRSQLPAAAAAEGGRMKGVLDGALLWRFVSLPAQVQCELTRAIGTTVDAVLLSLLDVD 269
[Close]
BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Match: A0A2D4CF34_PYTIN (CPSF_A domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF34_PYTIN)

HSP 1 Score: 221 bits (563), Expect = 4.630e-61
Identity = 131/348 (37.64%), Postives = 199/348 (57.18%), Query Frame = 3 
Query:  795 YVAVGTGMNEPQGEDKAARGRLLLFEVDYAYRAREEGKHEHAV-KLKQVFAKEQLGPVSGESGPVSAVAQLGRHLVLSVGKKVIVNRWDPKTCTLELIGFHDPRIYVTSLSVIKNRFILVGDVYGSVQLVVWREEDHSLTALSKDHEDCEVFSTEYLIDEPGMAIVVADGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRTRGNLRDGAR---------------YCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRGYRLFDHGPTFR---------YETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDI 1763
            YV +GTG   P GED++ +GRLLL+E+DYA     EG+    + KL+ +F KE         G +S V+QLG H++ +VG K+IV  ++ K+  L    F+D ++Y+ SLSVIK+ +++  DVY SV  + WRE+   L  L+KD+E   + +TE+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG ++  + R+ T  +    A+               Y  L G+ +G +GAI+ V ERVFRRL+ LQ +M N L  N A NPR +R+       R          + K+  LDG +L+RF+ LD   Q +L R IGTT + ++ NLL++
Sbjct:   29 YVVIGTGFVGPHGEDESGKGRLLLYELDYAQYTTAEGETSAKLPKLRLIFIKEH------HHGAISFVSQLGPHVLAAVGMKLIV--YEFKSDQLTACAFYDAQMYIVSLSVIKD-YVMYADVYKSVHFLRWREKQRQLQLLAKDYEPLAITATEFSVAEKKLALLAGDMEENLHVMQFAPQDIESRGGQRLLRTSDFHLGVQITSMIRKATGTSNPPAAQMAGHRKHQEQPSQSQYVTLLGSSEGSVGAIMAVGERVFRRLFTLQNVMINTLPQNCALNPREFRMMKSNGGRRTGRPDAWCKQKWKKGFLDGHVLFRFLHLDYVAQKELARCIGTTPEVIIHNLLEV 367
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BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Match: A0A662X1P8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X1P8_9STRA)

HSP 1 Score: 229 bits (583), Expect = 1.610e-58
Identity = 140/352 (39.77%), Postives = 209/352 (59.38%), Query Frame = 3 
Query:  789 RMYVAVGTGMNEPQGEDKAARGRLLLFEVDYAYRAREEGKHEHAV--KLKQVFAKEQLGPVSGESGPVSAVAQLGRHLVLSVGKKVIVNRWDPKTCTLELIG--FHDPRIYVTSLSVIKNRFILVGDVYGSVQLVVWREEDHSLTALSKDHEDCEVFSTEYLIDEPGMAIVVADGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRT-------RGNLRDGAR---YCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRGYRLFDHGPTFR---------YETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLAS 1775
            R Y+ +GTG   P GED++ RGRLLL+E+DYA   +EEG        KL+ VF KE         G +S VAQLG +++ +VG K+IV  +  +    +LIG  F+D ++++ SLSV+++ F++ GDV+ SV  + W+E+   LT L+KD+E   V +TE+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG +VA + R+R        R N R  A    Y  + G  +GG+GA++PV ERVFRRL+ LQ +M N L  N A NPR +R+       R         ++ K++ LD  +L+RF+ LD   Q +L R IGTT + V+ NLL++  A+
Sbjct: 1440 RPYLVIGTGCVGPHGEDESGRGRLLLYELDYAQYVKEEGGTTSGKLPKLRLVFIKEH------RQGAISMVAQLGPYVLAAVGSKLIVYEFKSE----QLIGCAFYDAQMFIVSLSVVRD-FVMYGDVFKSVHFLRWKEKQRQLTLLAKDYEPLAVSTTEFNVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRTSDFHLGVQVASMFRKRVDTGGQMVRTNGRASAPPGYYVNVLGNSEGGVGALIPVGERVFRRLFTLQNVMINTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKHKWKKSFLDAFVLFRFLRLDYVAQKELARCIGTTPEVVIHNLLEVQRAT 1780
[Close]
BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Match: A0A833S4Z4_PHYIN (CPSF A subunit region n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833S4Z4_PHYIN)

HSP 1 Score: 228 bits (582), Expect = 2.040e-58
Identity = 142/353 (40.23%), Postives = 206/353 (58.36%), Query Frame = 3 
Query:  789 RMYVAVGTGMNEPQGEDKAARGRLLLFEVDYAYRAREEGKHEHAV--KLKQVFAKEQLGPVSGESGPVSAVAQLGRHLVLSVGKKVIVNRWDPKTCTLELIG--FHDPRIYVTSLSVIKNRFILVGDVYGSVQLVVWREEDHSLTALSKDHEDCEVFSTEYLIDEPGMAIVVADGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRR----------TRG-NLRDGARYCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRGYRLFDHGPTFRY---------ETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLAS 1775
            R Y+ VGTG   P GED++ RGRLLL+E+DYA    EEG        KL+ VF KE         G +S V+QLG +++ +VG K+IV  +  +    +LIG  F+D ++Y+ +LSV+K+ F++ GDVY SV  + WRE    L  L+KD+E   V +TE+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG +V+ + R+R          T G N    + Y  + GT +GG+GA++PV ERVFRRL+ LQ +M N L  N A NPR +R+       R          + K++ LD  +L+RF+ LD   Q +L R IGTT + VM NLL++  A+
Sbjct: 1315 RPYLVVGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFIKEH------RQGAISMVSQLGPYVLAAVGSKLIVYEFKSE----QLIGCAFYDAQMYIVTLSVVKD-FVMYGDVYKSVHFLRWREMQRQLVLLAKDYEPLAVSATEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKRVDASGSVVSATNGRNAAPLSNYVNVMGTSEGGVGALVPVGERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVMHNLLEVQHAT 1656
[Close]
BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Match: D0NYE8_PHYIT (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=D0NYE8_PHYIT)

HSP 1 Score: 228 bits (582), Expect = 2.120e-58
Identity = 142/353 (40.23%), Postives = 206/353 (58.36%), Query Frame = 3 
Query:  789 RMYVAVGTGMNEPQGEDKAARGRLLLFEVDYAYRAREEGKHEHAV--KLKQVFAKEQLGPVSGESGPVSAVAQLGRHLVLSVGKKVIVNRWDPKTCTLELIG--FHDPRIYVTSLSVIKNRFILVGDVYGSVQLVVWREEDHSLTALSKDHEDCEVFSTEYLIDEPGMAIVVADGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRR----------TRG-NLRDGARYCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRGYRLFDHGPTFRY---------ETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLAS 1775
            R Y+ VGTG   P GED++ RGRLLL+E+DYA    EEG        KL+ VF KE         G +S V+QLG +++ +VG K+IV  +  +    +LIG  F+D ++Y+ +LSV+K+ F++ GDVY SV  + WRE    L  L+KD+E   V +TE+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG +V+ + R+R          T G N    + Y  + GT +GG+GA++PV ERVFRRL+ LQ +M N L  N A NPR +R+       R          + K++ LD  +L+RF+ LD   Q +L R IGTT + VM NLL++  A+
Sbjct: 1399 RPYLVVGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFIKEH------RQGAISMVSQLGPYVLAAVGSKLIVYEFKSE----QLIGCAFYDAQMYIVTLSVVKD-FVMYGDVYKSVHFLRWREMQRQLVLLAKDYEPLAVSATEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKRVDASGSVVSATNGRNAAPLSNYVNVMGTSEGGVGALVPVGERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVMHNLLEVQHAT 1740
[Close]
BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Match: A0A0P1AL14_PLAHL (Cleavage and polyadenylation specificity factor n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AL14_PLAHL)

HSP 1 Score: 228 bits (582), Expect = 2.130e-58
Identity = 142/357 (39.78%), Postives = 209/357 (58.54%), Query Frame = 3 
Query:  768 LEQGGSPRMYVAVGTGMNEPQGEDKAARGRLLLFEVDYAYRAREEGKHEHAV--KLKQVFAKEQLGPVSGESGPVSAVAQLGRHLVLSVGKKVIVNRWDPKTCTLELIG--FHDPRIYVTSLSVIKNRFILVGDVYGSVQLVVWREEDHSLTALSKDHEDCEVFSTEYLIDEPGMAIVVADGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRTRG-----NLRDGAR---YCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRGYRLFDHGPTFRY---------ETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLAS 1775
            +E     R YV +GTG   P GED++ RGRLLL+E+DYA    EEG        KL+ VF KE         G +SAVAQLG +++ +VG K+IV  +  +    +LIG  F+D ++Y+ +L+VIK+ FI+ GDVY SV  + WRE    L  L+KD+E   V +TE+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG +V+ + R++        N ++GA    Y  + GT +GG+ A++PV ERVFRRL+ LQ +M N L  N A NPR +R+       R          + K++ LD  +L++F+ LD   Q +L R IGTT + V+ NLL++  A+
Sbjct: 1407 MEWNKKKRPYVVIGTGCVGPHGEDESGRGRLLLYELDYAQYVNEEGGTTSGKLPKLRLVFIKEH------RQGAISAVAQLGPYVLAAVGSKLIVYEFKSE----QLIGCAFYDAQMYIVTLNVIKD-FIMYGDVYKSVHFLRWREMQRQLLLLAKDYEPLAVSATEFSVYEKRLALLAVDMDENMHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKQVDAVVSGTNRQEGAFPLCYVNILGTSEGGVSALVPVSERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAELRCGRSDGWSKKKWKKSFLDALVLFQFLQLDYVAQKELARCIGTTPEVVIHNLLEVQHAT 1752
[Close]
BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Match: A0A1V9ZXF6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXF6_9STRA)

HSP 1 Score: 227 bits (579), Expect = 4.550e-58
Identity = 130/337 (38.58%), Postives = 197/337 (58.46%), Query Frame = 3 
Query:  795 YVAVGTGMNEPQGEDKAARGRLLLFEVDYAYRAREEGKHEHAV-KLKQVFAKEQLGPVSGESGPVSAVAQLGRHLVLSVGKKVIVNRWDPKTCTLELIGFHDPRIYVTSLSVIKNRFILVGDVYGSVQLVVWREEDHSLTALSKDHEDCEVFSTEYLIDEPGMAIVVADGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRTRGNLRDGARYCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRGYRLFDHGPTF-------RYETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLASLF 1781
            YV +GTG+  P GED+  +GRLL++E+DYA      G   + V KLK ++AKE       + G +S V QLG +++ +VG K+IV  ++ K   L    F D ++Y+ SL+VIK+ FIL GD+Y S   + W   +  L  L+KD E+  V STE  + +  + +V +D   N+ V+Q+ P++  SRGG +LL  SDF++G+R+  + R+R    +   A Y  L  T +GG+  + PV E+ FRRLY LQ IM NAL HN   NPR +R   H           +++ K+  LD +++ R++ LD   Q +L R IGTT D V+ NLL++  ++LF
Sbjct: 1203 YVVIGTGIVSPNGEDENGKGRLLVYEIDYAQYTDVHGVTGNKVPKLKLIYAKEH------KQGAISMVKQLGIYVLAAVGSKLIV--YELKNNQLVGCAFFDAQLYIVSLNVIKSTFILYGDIYKSTYFLQWNPTEKRLVLLAKDFENLNVVSTEISVLDSRLGVVASDMLSNLHVMQFVPSSIESRGGQRLLRTSDFHVGARITTMLRKRLESKI---AIYVTLLATAEGGVNVLTPVYEKSFRRLYTLQTIMINALPHNAGLNPREFRQALHNQLTGRQDAWCKWKGKKAFLDMAVIGRYIDLDYVAQRELARCIGTTADVVLHNLLELQRSTLF 1528
[Close]
BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Match: H3GUH2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GUH2_PHYRM)

HSP 1 Score: 227 bits (579), Expect = 5.130e-58
Identity = 140/352 (39.77%), Postives = 207/352 (58.81%), Query Frame = 3 
Query:  789 RMYVAVGTGMNEPQGEDKAARGRLLLFEVDYAYRAREEGKHEHAV-KLKQVFAKEQLGPVSGESGPVSAVAQLGRHLVLSVGKKVIVNRWDPKTCTLELIG--FHDPRIYVTSLSVIKNRFILVGDVYGSVQLVVWREEDHSLTALSKDHEDCEVFSTEYLIDEPGMAIVVADGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRTRG--------NLRDGAR---YCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRGYRLFDHGPTFRY---------ETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLAS 1775
            R Y+ +GTG   P GED++ RGRLLL+E+DYA    EEG     + KL+ VF KE         G +SAV QLG +++ +VG KVIV  +  +    +LIG  F+D ++++ +L+V+K+ F++ GDVY SV  + WRE+   L  L+KD+E   V +TE+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG +VA + R+R           N R  A    Y  + G+ +GG+GA++PV ERVFRRL+ LQ +M N L  N A NPR +R+       R          + K++ LD  +L+RF+ LD   Q +L R IGTT + V+ NLL++  A+
Sbjct: 1431 RPYLVIGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGASGKLPKLRLVFIKEH------RQGAISAVTQLGPYVLAAVGSKVIVYEFKSE----QLIGCAFYDAQMFIVTLNVVKD-FVMYGDVYKSVHFLRWREKQRQLVLLAKDYEPLAVSTTEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVASMFRKRVDAHGPVVPATNGRPSALPSFYVNVMGSSEGGVGALIPVSERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQQRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVIHNLLEVQHAT 1771
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1132.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8W9_ECTSI6.790e-16294.69CPSF_A domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G8W8_ECTSI1.830e-10073.89Cleavage and polyadenylation specificity factor CG... [more]
A0A835Z873_9STRA2.540e-7144.78Cleavage/polyadenylation specificity factor, A sub... [more]
A0A2D4CF34_PYTIN4.630e-6137.64CPSF_A domain-containing protein n=1 Tax=Pythium i... [more]
A0A662X1P8_9STRA1.610e-5839.77Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A833S4Z4_PHYIN2.040e-5840.23CPSF A subunit region n=2 Tax=Phytophthora infesta... [more]
D0NYE8_PHYIT2.120e-5840.23Uncharacterized protein n=18 Tax=Phytophthora TaxI... [more]
A0A0P1AL14_PLAHL2.130e-5839.78Cleavage and polyadenylation specificity factor n=... [more]
A0A1V9ZXF6_9STRA4.550e-5838.58Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
H3GUH2_PHYRM5.130e-5839.77Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1132contigP-littoralis_Contig1132:52361..66691 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G8W9
PFAMsCPSF_A,MMS1_N
Model size2578
Max annot lvl2759|Eukaryota
KEGG koko:K14401
KEGG Pathwayko03015,map03015
Hectar predicted targeting categoryother localisation
Exons11
Evalue2.35e-167
EggNOG OGsCOG5161@1|root,KOG1896@2759|Eukaryota
DescriptionmRNA cleavage
Cds size1539
COG categoryA
BRITEko00000,ko00001,ko03019,ko03021
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1132.18.1prot_P-littoralis_Contig1132.18.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1132 53155..65278 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789460.2328243-UTR-P-littoralis_Contig1132:52360..531541680789460.2328243-UTR-P-littoralis_Contig1132:52360..53154Pylaiella littoralis U1_48UTRP-littoralis_Contig1132 52361..53154 -
1680789460.3686488-UTR-P-littoralis_Contig1132:65278..654071680789460.3686488-UTR-P-littoralis_Contig1132:65278..65407Pylaiella littoralis U1_48UTRP-littoralis_Contig1132 65279..65407 -
1680789460.383549-UTR-P-littoralis_Contig1132:66575..666911680789460.383549-UTR-P-littoralis_Contig1132:66575..66691Pylaiella littoralis U1_48UTRP-littoralis_Contig1132 66576..66691 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789460.2446668-CDS-P-littoralis_Contig1132:53154..533471680789460.2446668-CDS-P-littoralis_Contig1132:53154..53347Pylaiella littoralis U1_48CDSP-littoralis_Contig1132 53155..53347 -
1680789460.2599647-CDS-P-littoralis_Contig1132:54407..545891680789460.2599647-CDS-P-littoralis_Contig1132:54407..54589Pylaiella littoralis U1_48CDSP-littoralis_Contig1132 54408..54589 -
1680789460.2721434-CDS-P-littoralis_Contig1132:56024..561171680789460.2721434-CDS-P-littoralis_Contig1132:56024..56117Pylaiella littoralis U1_48CDSP-littoralis_Contig1132 56025..56117 -
1680789460.2822046-CDS-P-littoralis_Contig1132:57862..580031680789460.2822046-CDS-P-littoralis_Contig1132:57862..58003Pylaiella littoralis U1_48CDSP-littoralis_Contig1132 57863..58003 -
1680789460.2938776-CDS-P-littoralis_Contig1132:59793..599171680789460.2938776-CDS-P-littoralis_Contig1132:59793..59917Pylaiella littoralis U1_48CDSP-littoralis_Contig1132 59794..59917 -
1680789460.3099504-CDS-P-littoralis_Contig1132:60588..606651680789460.3099504-CDS-P-littoralis_Contig1132:60588..60665Pylaiella littoralis U1_48CDSP-littoralis_Contig1132 60589..60665 -
1680789460.3269296-CDS-P-littoralis_Contig1132:61230..613591680789460.3269296-CDS-P-littoralis_Contig1132:61230..61359Pylaiella littoralis U1_48CDSP-littoralis_Contig1132 61231..61359 -
1680789460.33717-CDS-P-littoralis_Contig1132:62460..629311680789460.33717-CDS-P-littoralis_Contig1132:62460..62931Pylaiella littoralis U1_48CDSP-littoralis_Contig1132 62461..62931 -
1680789460.3485303-CDS-P-littoralis_Contig1132:63699..637981680789460.3485303-CDS-P-littoralis_Contig1132:63699..63798Pylaiella littoralis U1_48CDSP-littoralis_Contig1132 63700..63798 -
1680789460.3597436-CDS-P-littoralis_Contig1132:65248..652781680789460.3597436-CDS-P-littoralis_Contig1132:65248..65278Pylaiella littoralis U1_48CDSP-littoralis_Contig1132 65249..65278 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1132.18.1

>prot_P-littoralis_Contig1132.18.1 ID=prot_P-littoralis_Contig1132.18.1|Name=mRNA_P-littoralis_Contig1132.18.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=513bp
MEDALAEQPKAGLPKGDEEQGDGDDDEEEEAAGFLDRHVVKHKNWTVADP
ALGGAPPLLVPRFELRVLALAAAATASSSPAAATAAGTSSSSAQDEGDDD
GATASASASASAAAAAAEGGIIGKEAGGDGEDGQGGGQGTDVPGSEASLL
LSAAVVESHPMDSDENCICMTLVRLEQGGSPRMYVAVGTGMNEPQGEDKA
ARGRLLLFEVDYAYRAREEGKHEHAVKLKQVFAKEQLGPVSGESGPVSAV
AQLGRHLVLSVGKKVIVNRWDPKTCTLELIGFHDPRIYVTSLSVIKNRFI
LVGDVYGSVQLVVWREEDHSLTALSKDHEDCEVFSTEYLIDEPGMAIVVA
DGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRTRGNLRD
GARYCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRG
YRLFDHGPTFRYETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVM
ANLLDIDLASLF*
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mRNA from alignment at P-littoralis_Contig1132:52361..66691-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1132.18.1 ID=mRNA_P-littoralis_Contig1132.18.1|Name=mRNA_P-littoralis_Contig1132.18.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=14331bp|location=Sequence derived from alignment at P-littoralis_Contig1132:52361..66691- (Pylaiella littoralis U1_48)
GCGGGAGGCTGCGGTTCATATCTGCGGCTCCCGCGGCGTCGCAGCTTGTC
ACGCCCGGTGCAAGCGGCGGCGGGGGCCTGGGCGGGGGCGGGCAGGGGCA
TTTTGTTGCCGAGAAGGTGTGTTTGTTGCCGAGAAGGTGTGTAGTTGGTG
TTGATCTTGTTGATCTTGTTGTTGTTGTTGTTCGCGTTGCTGTTGCTTGT
TGCTTGTTGCTTGTTGTTGTTGTTGTTGTGCTTGTTTTCGATGATCACAT
GAGGTCACGACAAAAGTCTAGCCCGTGGTCGCACACCAGACACATGTAAA
TATATCGTGCGATCAAAGAAATAATTCATGGGCACCCCAAAAAAATCAGA
GATAGTATTGGGGTACCCTCTGTATGTGTGTGTGGGGGGAATTTTGTGAA
CGACATGGGGGTATCGCGGGGTACTTTCCCGCCGAGGTGCTGAAGTGGGG
TGGTGGGTTGCGGGTGATGTGCAGCTTGGTCACGTAGGGGCGGCAGCGGG
CCAAGGAGGATTTTGTTTTTATTTCCCGGCGGGAGGATACAAGCGCAAGC
ACTTCTGCGAACTTCTTTTTCTTGACGAGCAAACGGTATGTGAGGCTAGT
GCTGTGCAGAGGGGGGCGAAGGAGCACGGCCCCGTGCATGCCTTTACCCC
CTGCCGCACGAGCTTTGCCCGGGCATTCCAGCAGCAAGCATTTGTTCTTG
TTCTTCTCACTCGTCTTTTTTTTTTTTTCTGTGTGTGTTGTTGTTGTCTC
TTGCCAAACAAAGGTGTGACGCTTGGGGCTGCGGTGTTCGTCACTTTCGC
AACAATCATAGTGTGTACGATAACAACAAACGGTAACAATGTACTGTACT
CACCTCGTTTCGCCCCTTTTCTTGTATCGTGTAACACAACAAAAAAGTTT
GGTTCGGGGCGGGGCGACGGTGCGCATGCTTCATACGGCGCTAAAGATTA
TTTTTTTAATTTTTTTTTTTTTTTTTGTCTTTCTCTGGTTTGTCTTGTCC
AAGTGAAGGCGACGTCGGGGGCGACCTCGCACGTTGAAAACGACCAGCGT
TAACCCTTTATTTTTTTTTTTGTCTCGTTTGACTTGCTATTACAAGTGTG
CGTCGGATGCAAGTTTCTGTAATACAGCATACACATTTGCATTTTCTATT
TTTTGCTTCTTGTCCGAATGGAGGTGGTGGGAGTTGCCGTGGGGACGAGA
CGACCTCGCACCTTGCGGTAACACACGAACAAACATGCCTCTTCTTGCCT
CTCTTGTTATTTCTTGCCCCAAAAAAAAAAAAAGGTCAGGCTGGGGGCGA
CAGTGTGCGGTCTCGTCCACCTCCCTTACCAGCTTGCTCAGGCCGGCAAG
ACCGGGGACATCCTGAAGCAGCTCCTTCGGAAGAGGGGCCACTACGTCGC
TCTCGTGTCGACAATGGAGGACGCTTTGGCGGAGCAGCCCAAGGTTGTGA
CCACACAGCAGCAGTGCGCAACGAATAAACTTAGTTGATTGGCACCGGCA
CAAAACAACTCTCGGCCATGATTATATTATCACTGCATCTTACGGGCAGC
CATCAAGTATAATATCGCGCATCGGTTTTGACGATATTGTTTTGGAAGAG
CAGCCCAAAGGTATACTACACTTCATACGGCAGGGTGTGACGTTCTTTTC
CGCCTGAGGTGTGTGCTTTATTACTGTGATGCCAACCGTCCGCTGAGAAC
AGTTTTGGCAGAGGAGACCAAAAGCATATGACACTCCTTCAAATTGTGTT
ACCCGGTATATTTTTCTGAGAAAATTAGAAAAACACGCCCCTCTTGAGAA
ATCACGCAGCAGGCCATATTGATGTCCGTTCCAAGTTTTTTAGCTAATGT
TTTTTCAATTTCTCTGCCTGTGTATCGTGTGTATCGTGTGCTGTTTTAAT
TTCCTCGTTTGGTCTTGTCAACCACGGAGGACGCTTTGGTAGGGCAGCAA
CCCCAAGGTTCCTCATGACAAAAGCCATCCGATTGTGGAGCAACTGCCGG
CGAGAATTTCGTGATGCTGATACTTTTGGTTCGCGTGACGTGGACCATAC
ACGACCCTTGACCCTTCATTTCATATATGGCCCTTCACTTTATGTGTTCG
TCGGCCACGGAGGACAGACACGCCTCGGCAAAGGCCACCTGAGTTGCTGC
TGCGGCCAACGGGTGCCGCCGTGGTGTCGGTGTCCGACATATTCCTCGAT
GCATCGTACAATTCCTCAGTATCAAGTGGTTTTCGATTCGTTTCGGTTCT
AAAGTAGTTGCAACAGGTGTCCAAGGTAGCGCCAAGATCAAATTAGTCTA
TGTTGTGTGCAATGCATTCAAGTGTTGTGCGTTGTGAGTGTATCATACCC
CGAGTACTTTTTTGTCTCTGCGTCTCCGCAGTCGGGCATGCGCACCGTAT
GATATTCAAGACTTTTTTTTTTTTTCGATTTTTTTGTCGTTTCTTGGAAC
AAGGGTCCATCCACGAAACGTCAAAATCAAAACAGTTTTTTTTTTTTCTA
GAGTCGTGCGTGCGTGTGTGCTTGTGTGTGTGTTCTCTTTCTTTCTGCTT
TCTTCGTCCTAGGCGGGTTTGCACCGTCTGCTAACCAAAAATTACTGTAC
CGATATTTTTGTCGTTTATTGAAACAAGGTCCCCACGAGACGTCAACGTC
ATGTCGTACACTTTTTTTTTTTTGGTTGTGTGTGTGTGTGTGTGTGGTTG
TGTTCTCTTTCTTTCTTTTTTCTTTGTTCTCGGGCGTTTTTTTTTTTTGG
TCTGCTAACCAAAACGTTTTTTATTCCGATTTTTTGCCGTTTCTTGAAAC
AAGGGTCCACAAAACGTCACCAGACCCTCTTTTTTTGGTCGTGTGTGTGT
GGGTGTTCTCTTACTTTCGTTTTCCTTTGTCCTTGCCTTTCAGGCGGGTT
TGCCGAAAGGAGACGAAGAACAGGGGGATGGGGACGACGACGAGGAGGAA
GAGGCGGCAGGCTTCCTGGACAGGCACGTCGTCAAGCACAAGGTGAGCCG
TGAACGACAACCAGTGCGGCGCGCCTCACAGCAGTATGATAGTATTTTTG
CCGCGCACACACGAGACGAGACGAACGAGGTACTGCTGTGAAGATATCAT
TCGATGAGTAGTGTTTTCGTCTTATGATACAGTGGTATTATGGCGTTGCC
GCACACACACATTCGAGACGAACGAGGTACTGCTGTGAAGGTATCATTCG
ATAAGTAGTGTCTTTCGTCTTACAGTAGTACGTACGATGGTGTTGCCGCA
CACACACACACACGAGACGAAAACGAACGAGGTACTGCTGTGAAAAGGAT
GATTCGATGAGTAGTGTGATAGCGTTGCCGCACACACACACACGAGACGA
ACGAGGTACTGTACTGCTGTGAAGCATCATTCGGAGTATGATGGGTATGA
TAAAAGTTTTTTCTTTGACGTTTGTTCGTCCCGATTTTTTTTTGCGACTC
AAAGTCGTCGCGCACACGTTTTCGAGAGCCCTTCACTCATCACACGATTA
GTAAGTACCAGTAGTGTTTTTCGTCGGCACAACGCAAACGGGTTAAGAAC
GCATGTGTCCTTTAATTTTTGTTGTTGTTGTTGCCCCAAACAACACGGAA
GCAAACGCGGTTGGTTTATTGACACACTGCTGTCAAGCAAGAAATGAAAA
GAAATAGAAGCCCCCCCACGTCACCCCCTTCCCTACCCCCCCCCCCCCCC
CCCTCCTTCTACCTCTCCCTCCTCCTGTCACCCCCTTCTGCCGACCGACG
CCACTTGCAGAACTGGACAGTGGCCGACCCTGCCCTGGGCGGTGCCCCCC
CGCTTCTCGTCCCCAGGTTCGAGCTCCGCGTGCTTGCTCTCGCGGCAGCA
GCGACAGCGTCGTCATCGCCAGCAGCAGCAACAGCAGCAGGAACATCCTC
TTCGTCTGCTCAGGACGAAGGCGACGATGATGGCGCTACTGCTTCTGCTT
CTGCTTCTGCTTCTGCTGCTGCTGCTGCTGCCGAGGGCGGTATCATCGGC
AAAGAAGCCGGCGGCGACGGCGAGGATGGGCAGGGGGGGGGGCAAGGGAC
CGACGTCCCCGGGTCGGAGGCGTCCCTGCTGCTGTCGGCGGCGGTGGTGG
AGTCGCACCCGATGGATTCCGACGAAAACTGCATCTGCATGACCCTGGTC
CGACTGGAGCAGGGAGGGTCCCCGCGGATGTACGTGGCGGTGGGGACCGG
GATGAACGAGCCCCAGGGAGAAGACAAGGCGGTGAGGACATTTATGATAT
TCTTCATGCGGTGTGTTTTGGTCCCATCTATTCTGGCCACCAGTCTACAG
TACACCTTTCGATACGGACAAGGTGGTGAGGACATTTATGATATTCTTCA
TGCGGTGTGTTTTGGTCCCATCTATTCTGGCCACCAGTCTACAGTACACC
TTTCGATACGGACAAAGTGGCGAGGACATTTATGATATTCTTCCTGCGTC
GACCGCTGTGTGTGTGTGTGTGCGCGTGTGTGTGTTTGTTCTGTCTACAA
CTTTCGGTACGCCATCTTCACACTATCCCGCATGGATTTCTACACCGCGT
GTCGGTCGATATCATAGCGCCGCACCTCCCTCCATACTCATAAAACACAA
CTCCATCTTCATACGAGTAGCGCGTTGACGAAAACTTCGCGCTAGCGTGG
CATACACTGATGGAACGCGCTTGAATTACATATCAACATGCTTGTTACTT
TGTATGTAGGTTCCACGCCTCTATTGCCACTCGGGCGTGATGAGAGAGTG
GCAGTTCATGGTTTTGATCTGGTCTACATACGTATGACACCTGCGTAGCG
TGTAGACCAGCAAATTTGTTTGCGTGTCTGCTGCCGAGCTGCGCACGCTT
CGGGCGAGGCAGCGCGTTCCATTAGTTACGCTAGCGTGATCGGTGATCAG
TCAGTAAATTATAACAAGCATGTTGATGTGTCATTCAAGAGCGTTCCGTC
GGTCTATATTCCATCAGTTTATGCCACGCGAGCGCGGTCAGTCAGTGAAT
TATAACGACCACGCTGATATGTAATGTGAGCGTGTTCCATCAGTGTATGC
CACGCTGGCGCGATCAGTCAGTAAATTATAACCAACGTGTTGATCTGTGT
TTTTTCAAGTGCGTTTATCAGCGTGTGCTACGATGCCGTAATCGGTCAGT
AAATTATAACCAACGTGTTGATCTGTGTTTTTTCAAGTGCGTTTATCAGC
GTGTGCTACGCTGCCGTAATCAGTCAGTAATACCTTAGTAATAATCTGGT
ACGTTAATCGACCTGTAAAGTGTCTACGAAAGTACCATTTTGATCTGTGA
TTCAATCAAGAATTGTGCTGCTTTTTTCTCAGGCGCGAGGACGGCTGTTG
CTGTTCGAGGTGGACTACGCCTACCGAGCACGAGAGGAGGGGAAGCATGA
GCACGCCGTGAAGCTCAAGCAGGTCTTCGCAAAGGAACAGCTCGGCCCAG
TGTCGGGAGAGGTGGGGGTGGGGAGGTGTTGGGGTGGGTTGGGGAGCGCT
GGGGAGTTGTGTAGGGTGTCTTGCAGGGGGCAGGCTGTCGTAGGGGCTAG
AGGACTGCTTCCTTCACATCATTGTTGCTGTTGCTGTTGCTGTTGTTATT
GCTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGAAGTTGTTGT
ACCCCGCATCTTCATTTTTCATGTATCTTGGAAGTTTAGCAGAATTTTTG
GGAATTTTGATCCATTGGCAAAGCCATAACCTAACTTACACGATAGTTTT
TTACGCCGTTGTGTGTGATTTTGTGTTTTTTATGTACTCATCTAAAAATT
CCTGTGCTCACCATGTCTTTTGGCACTGTGTGTTGGTACTCTGTTTTTTT
GCGCTTGTTTTCGTATTTTTATTTTGCCCTTTGCTCTATTATTATTTTTA
TTATTACTCGTATAACTTTTGTTTTGTTTTTTCACCTGTTCTTTGTCTAT
CATGTCGCTCTTGCGCACAAATGTTTTTGACGTGTTACATGTATCGTGTC
ACAACTTGCGTTCTTGTTGTGTCCAGTCCGGCCCTGTTTCCGCAGTGGCG
CAGCTCGGTCGTCATCTTGTCCTCAGCGTGGGCAAAAAAGTCATTGTTAA
CCGGTGAGGCTTGAGTTGCCGATGGTGCAATGACAATTCACTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGCGGTTGTTGCGGTTGTTGTTGTTGTTGTTGTTGTTGCG
GTTGTTGTTGTTGTTGTTGTTGTTGCGGTTGTTGTTGTTGTTCTTGTTGT
TGCTGTTGTTCTTGTTCTTGTTCTTGTTGCTTGTTCTTGTGCTTGTTCTT
GTTCGTCGTTCGTCGTTCGTCGTTCGTCGTTCGTCGTTCGTCGTTTGTCG
TTCGTTGCTGCTGTTTGTTGGCTGCTGCTGCTGCTGCTGCTGCTGCCGTT
ATCGTCGAGTTTGTTTCTCACATTCAATCCCATCTCCAAATCTAGCCCGT
GGTCACAGACCGATACACTCGGCTTATGAGAGCTCGAGAAAAACAAACCA
CAGAAGGAAATCCCTTTCACAACACCCGAGAGTACACCAGTGTTGGCCGC
TGAACTGGGTCATCACGGTGCGGTTTTCGGTTCTCACTTGACTTGATTCG
TGGCGTGGGTGTCAGTCATCCTTGCTAGACCTGATTCGTGACATCGGATG
TCATCTTGCTACTCTATACGTATGGTTATTTTTGTGACATGAATGGGTGT
TGTTTTCGTGTTCTTTGGGACCAGGTGGGACCCAAAGACGTGTACCCTCG
AGTTGATCGGTTTTCACGATCCTCGGATCTACGTCACGAGCCTGTCCGTG
ATCAAGAATCGGTTCATCCTGGTAGGGGATGTCTACGGCTCTGTGCAGGT
GATGACGTGTCGAATCGAACATACGTGAACGAATGAAATCAGCAAAAGTC
CGTATGGACCGCTGGCTGCAACCACCGGGTGCACTGCTCGTCTAAAACAT
TTTCCCTGGTACCCGTATTTCAGTATTCCAGAGGAAAGGGGGCACCGTAT
TCCACTTTCCAATTACCCAGGTACCCGCACGTGTCGAAGCGAACATTCTG
TTGTTGTTGATTCTCACATTAGCTCACTACCGCCGCAGTCTAGCCCCTGG
TCACAAACCAGGCACATATCGTGCTAGGAGGAAAAAAAATAAAAATAAAA
TATATGGACTATGATCACCCACTGTCAAATCAGATATGGTACCGTTGGGG
TACCATCTGTGGTGGCCAGAGTACCAAAAAAAACACAGAAAAAAATATAA
CAGGCTCGAAATAAAAACAAAAATTGGAAACAGTCCGACAAACAAAAAAA
TAACCAAGACAAACCTCTACCATAACCATATACGGAGTACTTCGAAGTAC
TTCGTACATCGAACCAGGGCCCAGGGCCATGACAGACCAAGGCAAAGGCA
AACCAGGGCGATGGTCCAGTAACTATATAATCAATAGACGAAAGACAAAA
AAAAAAATACATGAGTGAATGAATCAGGGAAAGTCTGTTTGGATCGCTGG
CTGCGAACACCGTCCGTGTACACCGCCCGTCTAAAAAATTACCCGGGTAC
CCGTGGCGGTTACCCGGGTAATGAATTGCCTGTACGGTTCCGGGTACAGT
TACATATTTTTTCCCCGGGTAATTGAAATAGCAAGACGGGGCTCCTTCGA
TTGTGGGGTACCCCCATGAACACCACACACGGCGCCCCCTTGATTTTTGG
GGCACCGTATTTCACTATTCCAGAGGAAGGGGGGCACGGTATTCCACTTT
CCAATTACCCGGGTACCCGTCGGGTCCATCCCCACGAGGCCCAACGGGTA
CTCGGTTCCCAAAAAAGGAGACGGGGTATGATAACACCGCTTCTCCGCAA
TCACCAATACGTACGTATGATACTTTCCTTTCTCACAAGACTGATCACGA
ACTCCTCACATACCCGTGCGCTCGTCAAATCGGTTTATCGCACGTACCCA
CGCAGCAAGAGAAGATGCACGTTACTTCCCTGGTTCATCTTGTACCTCGT
CTTCTCGCGGGTGCTTATCTTTTTCTCCTTCTCTTTCTCTTGTGCCTTTC
GGTCGCTTCCTGTTCATGTTACCAGGGTCTTTCTGCGGCAGGAAGCCCCC
CCCCCCGCCTGACCTTCGCCGCCGGTTTCGAAACCAACACAGCCCCTACG
GCATATGGATGTCCTGAAGAATGGCGTCTCTGTCCTCTATGACGTCATTC
GGGGATAGCCGTCGCCATACACGTACAGAAGCCTTTTTCAAGATTTTTGC
TTTCGTGGCATACGCTTTCTCGAGGCGAACACGCGTATATATTGTCGAGA
AAAAATCTTTGGTTTGTCGGGGGCTAGTGTCGACACGAGTATTCACCCCC
TCTCTCTCCCCCTCTCCCTCTCCCTGTCCCTCTCTGGTGTGGTATGTTTT
ATTCCGCTATCATACAGCAGTAGTATTTATCTTTTCGTTCTCTCTCTCTC
TCTCTCTCTCTCTCTCGTTCCTTCATTTATTTATTTGTTTATTTATTTAT
TTATTTATTCTTCATTTTTTTTTTTTTCCAGCAATGCATGTAGATTTTTT
TATCTTTATCTGCCTCTTCTGTCCCCCACTACTGCTGCTGTATGTATCGC
TTCCTCCTATTGTATGATCTTATATCTGCCCCTTGCAGCTGGTGGTGTGG
AGAGAAGAAGACCACTCTCTGACGGCCCTGTCCAAGGACCACGAGGACTG
CGAGGTGTTCTCGACGGAGTACCTCATCGACGAGCCGGGCATGGCCATCG
TCGTCGCCGATGGCAGAAGAAACATCAAGGTACATTTACATTGATTACAG
CAGGATGATAGGAAGCGCCCTGCCCCCCCCATCCCCCTAGGGCAATGCTA
CCAAAGTACAAGTTACCGTGATGTTTCGGTGCCCCCCCCCCCACGCCGGG
GGCAATGCTATACTAAAGTACAAGTTCCCGTGATATTTCGGTGCCCCCCC
CCCCCCAGGGCAATGATACACCAAGCGCAAGTTACCGTGATATTTCTGTG
AAACTTGTTCTTATTTTTCTGTATGGTACTGCGGAGCTGTACCCTCTTTT
CTCGTGTTGGTATGAAATCCCTCGAGGGGTTAATCCTTCACGGGTTTTCT
CAGATATCTACGTACCAGGTATGACATAAGAAGTATTTTTTACACCGTGA
AATGTCCTGATGAGATTTCTCGGCAACGCTCACCTTTTGCTGCAACAGAG
GAAACTGACATGACTGCTATTTTCCTACGCTTTTAGTGCATGATTATGCA
GCTGTCGAGGCCACTCCTGTCATAAATAGATTACAAATGGACGGTTGCTG
ATCTACGCCAGACCCTCTTTGTGAGAGCGACGAATGCCCTCATGTCTTTC
CAAGAAAAAATAGGAAATGGATGGCGGAAGAAATATCAAGGTACGTAGGT
TGTGAACGTACTAGTCATCACATATTTTATTCAAGATCATATGTACAGGC
GGGCAAAACAATATCAAGAAGATACAGCGCTGATCATTTCTCGACATCGA
TCCGAAGAAATTTCGGACCACTCAGATCCAAGTGATGAAATACATCCAGT
CTGCGCTTTGATCATTTCATAGTTTCCACATAATTATGACAAAATCGATT
CGAAGCTGTTTCGGCCCACTCTCTAATTCACATTGCAGTAAAATACATCC
AGTCCGAGCTTTGACCATTTCCGTGCTATATGCACTAATGTGAAGTTATT
TCGGGGCACTCTCTGCTTCCAACCGATGGATTACATTCAGGCCGCGTTCA
TTGTTCAAGTTGCTTACCATGGTACAATACATGCCGCGCGTGAGATCAGA
GGCGGTACATTTGTTTTTTGGGCAATCAGCAGCCCACGCGAAGTGCTACA
CTAGATAAATCCGTCTTTTCCATCCATTCACTCAAGCTTTATGATAAGAA
CAAAAAGGCTGGTACCAGGTAATGGAGGGAAATATTGCAGAAGGGGTGTC
AAACCACCCGCACTTTTTTTTTTTTTGCAGGCAGATAATTGTTGGTCCTT
GCTGCTGGCGGTTACGAAAGTGGGGTGCTCGCGCACACGATCAGCCCTCG
CACACACAATCAAAACGAAAAACGTACGGCAGTGCACCCGTCCGCATTCG
GATGCACAGCTATATGATGTGTTGTCGTTGTTATCGTACCACAAAAAAAA
AATAAACGGTACCCTCGCTCCCCCCCCCCCCCCCGCCTCCCCGGTCCGCA
GATGACAGCGCCCGTTGCAAACAACGGTCGTCGGTTGCGAGCCCAACCAA
TGTCGCACTTCAAGCTGCCGCAGGCCGCAGACACGTCTCTGGATTTATCT
GGAGTAGGGACCCAATTCCACACCCCGCGAGTGCTCCGTTTAGGTTTTTA
TTTCCGAGAAAATTGAAAAAAAAACTCGCACAAAGTCATACGCGTATGAT
ATGAATATCATCTTCACCATCTCCCTGTCACCCTTCATATCATACAAAAA
CTGAGTGTTTTCCTCTCAGAGCCTCGTGCCTCCCCCACTCCCCGTTTGAT
CGTGACTGGTTCGACCTCCCTCAGGTGTTGCAGTACGCGCCTAACGCCAC
CAATTCTCGAGGGGGTACCAAGCTGCTGTGCCAGTCGGATTTCTACCTCG
GCTCTAGGGTAGCGAAGGTGAGCCACAACCCTGCAACCGCTCTTGGTGTC
GCTCTTGTTGCCCGTGCTGTGTTTTGTCCTTTTAGCAATGCTGCTGTATT
TTGCTGCTTCTGCTGCAGCTGCTTCTGCTGCTGCTGCTGCTGCTGCTGTT
GTTCTTGGTGGTTGGTGTGATTGTTGTGATGTCAGCGGCGCTGCGGGAGA
TACCCAATCGCCACGCACTTGTTTCGTGTTCGCGTTGCTGCCGTTGTTCA
CTTCTTTTTTACTACACCACGCAAATTTCCTCGCTCCAAGTTTTGCGCGT
CGGCACCACCAAACACTATTTATTTGTTTTGTTGCTGTTTCCTTCTCGTG
CTTTTTCGCTTCATGTCGTACCAATCACCACTCATCCTTCCGCCGTTTGC
ATCCTACTCTGTACGTGTGTTAAACTGTGATAGGCCCCGCAACATTTAGG
CTCTTGGTCGACGCCAATGATAGCCCTCTCACCCTTCGATAGCTACGTGT
CGCCATTTTCGGGTCGCCATTTTGTTATTCGTCAGTTGGAATATCACGTG
ACTCCCAGTAGCTAAGCTTCTACCTCGCTTTGATGACCGCTCAGTTTCAA
AACGCATTCTATACGCAAGTGAACGCGTCGCCATTTTTTCGGCGACGCTT
GTCACTGCTTTTTGGAGCTTTTCGTTGAAAACAAACTCTTCCATGATTTT
TCACCGGGGGGTAGTAAAAGCAAGTGAACGCGTTCACTTGCTTTTTGGAG
CTTTTCGTTGAAAACGAACTCTTCCATGACTTTTCACCGGGGGGTAGTAA
AAGGGTTTACCTTGGCTCCCCTCAGCAGACGTAGTCTAAGAGGGCCCCGA
GGGAGTGGTCGTAGCGGCCCACGACCGGGGGCGAGGCAACGTTCTCTTCC
GTGATTTTCAGCAATGAGAAGATAAAGTCAAGAGTGACATAATCTGTACG
AGTTGCCGGAGGGCCGGTCGTTTGTCCGCCGATAGGAAGAGCCAAATTAT
CTGACGGACTGTCAGGAAGGTCGGCGGACCTCGACCGGAATATTCTATGG
GGATTCTTACCCTCCCATCTTTGTCGTATCATATGTTATGTGCGTGCAAT
GGTTAAAACCTTCACTTCAGCCGGTATCCACACTCGTGTGCATAAATATT
GCTGCGTTTTTTTTTTCTGGCAGCTGACGAGACGACTCGGCCACCAGACA
CGATCTATCTCATTTGTTTCCTTTTCGTGCTTTTTCGCCTGAGACCAACC
ACCACCCACGTCCTCCCTCCGTTTGCATCCTACTTCGCAACTTCTTGTAC
GTGTGGAAATACATGTAATTGTTTTTTCTGGCAGTTGACAAGACGGCGCT
CTCGTCGCATCATATGAGCGCGCAATGGTTCACAATGTCACTTCAGCCGG
TATCCACACAACGTGTACATAAATATTCGTACTGCATTTATTTTTGTTGC
AGTTGACAAGACGGCGCACGCGCGGCAACTTGAGGGACGGCGCGCGGTAC
TGCCTCCTCGCGGGAACCCTAGACGGTGGGCTCGGGGCGATCCTTCCGGT
GGACGAGCGCGTGTTCCGGCGGCTCTACGCGCTGCAGGGCATCATGAGCA
ACGCTCTCGGCCACAACGGCGCAGCCAACCCGAGGTCCGTCGTTTCGTGT
CGCGGAGGCGTTTTTTTGGACGTATTTTTCTGGGTGTGAGGGTTGACCGG
CTTCACTCTTGCGCCTGTTGGAGTGCTCCTGCTGGGTGACTTGCGTTTTA
GAAGTGTCGAGCCTGTTGGTATGCTTGCGTGTTTTTTTTGCTTCGCCCTG
CTCTCTCGGTTCTGCTGCCATACACATGCACAGCGAGACTATTCGCTAGT
TGCTTCGCTGGGGTCTCCTGACTCTGCCGATATCATATCACAGCCCCTTC
GTTATTTCGTCCTTTGATGTGCTCCAGTTTTGCTTCGCGTTTGCCTTTGG
ATCTGTCGGCATATTATATGACCCTCCTTGCTTCGCCGAGGACGTAGGAG
TCCTGAGTCTGCTGACACACACCAAGGTGTTGTCCTCCCACCACATGGGT
CTTGCCCGTTGTTGCAACCACAGATAGATCCCAACTATGAGACGGTGACG
ATTCTTTCGGTTGCGCCCCGCCCGTTCATTGGTCGCCTGCTCTTGACGTG
ACCAGCGAACTATTTCACTCGAAGCACGTGAAATATACTGTGACGATTCT
CGTGGTTGTGCCCGTTCATTGGTCGCCTGCTCTTGACGTGACCAGCGTAC
TATTTCACACGAAGCACGTGAAAGGTGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGTTCGTAAAGCAAAGTAGTTTAAACTTTCATATTTTCG
TAGTATTACGTTTCCGCTCCCTCAGTAAAGCAACAAGGAACGGGTATAAC
GAGGTAGTTTATTCTGACAATACTTGGAAGTACCAGGTATACTTTTCCGC
TCCTCTTGGTGGAGCTACAACGAACAGTTGTAGTGAAGTAGTTTTTTCTT
GTATTCATTCGAAGCACACATTTCCGCTCCTTCTCTTGTTGAGCAACAAC
GAACGGTGTTTTGCTCGGTTATAACATCACACCGGCGAAAAAAAGTAAAA
ACGCAACCTTTCCGCCGCTCCGCTCCGCGACTTGCACGCACCACCAAAAA
AACAACCTGTTTTTTCGGTCGGAATAACTCTCTGGTGAGCGCAGGGGATA
CCGGCTCTTCGACCACGGGCCGACGTTCCGCTACGAGACGAAGCAGAACA
TGCTGGACGGGAGCCTGCTGTGGCGGTTCGTGGGTCTCGACGCTCGCACG
CAGCACGACCTCACGAGGGCCATCGGGACCACGGTGGATCGGGTCATGGC
TAACCTTCTGGACATCGACCTCGCGTCTCTTTTCTAGACCCATCATGCTA
GGCCTACGCCGTTCGCCGCCTGCCTGTCGATGTTTCCTTGCTTCGCGAAG
GGATGAAGGAGATTGTAGATCGGGTTTTCCGCGCCACTGCTCAACCTTGT
CGGACGACGTCGATTTTTCTGTGTTTCTGTCGTGTAGTATGCCTGCCTGT
AGCAGGTCATGTAGGAGGATGTTCCCAGTAAACAGGTCTTTGGTGTATCA
TACGGCTGTTACTGAAGAGCGTGCTTTTTAAGGGTCATGTAGACTGTCGT
TTTTGGGGTCCCCGAAGTGAAAGTTTTTTCCGCGGTATTCCGATGGGTCA
TTTTTGTTTTTAAGGAGACTTTCGTCTGGCGAAAATTCTGAAAGAAAGAT
AAAAAAGGTGCCCGCAGTTTTCTGATTTTTGGTCAATTTGTTTGAAAGGA
ATTTTCCGGTCCGCGAAAAATCAGCGGTCGACCGGTGACGTCCATCCACG
GTCGATCGTGACGTCACCTCCTGGGATTTTTTTTTTCTGTCTCTCTTTAC
GGTGTGCTGAATCGACCATTGGTTTTTGGCCTCGCATATATTTATCTCCC
CCTCCGTAGCTTTACCGTTGACCGATTGCTTGGCTCCACGCGCCATGTAC
TAGCGCGCGGGCTGGGCCCGTAGTTTTTCGGGAGCGCGGCGGCGATTTCG
GCATGCGCTGGTAAGTCGCCCTCCAATCATGCCGGCGATCCCGATCCAGG
TCACGTCGAAAGTACAGCTCACACATCCCGGAGACTGAATGTCGTGTGCC
TCGCGGTGTCACTGGAAGATCTAAAGTGAAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1132:52361..66691-

>mRNA_P-littoralis_Contig1132.18.1 ID=mRNA_P-littoralis_Contig1132.18.1|Name=mRNA_P-littoralis_Contig1132.18.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1539bp|location=Sequence derived from alignment at P-littoralis_Contig1132:52361..66691- (Pylaiella littoralis U1_48)
ATGGAGGACGCTTTGGCGGAGCAGCCCAAGGCGGGTTTGCCGAAAGGAGA
CGAAGAACAGGGGGATGGGGACGACGACGAGGAGGAAGAGGCGGCAGGCT
TCCTGGACAGGCACGTCGTCAAGCACAAGAACTGGACAGTGGCCGACCCT
GCCCTGGGCGGTGCCCCCCCGCTTCTCGTCCCCAGGTTCGAGCTCCGCGT
GCTTGCTCTCGCGGCAGCAGCGACAGCGTCGTCATCGCCAGCAGCAGCAA
CAGCAGCAGGAACATCCTCTTCGTCTGCTCAGGACGAAGGCGACGATGAT
GGCGCTACTGCTTCTGCTTCTGCTTCTGCTTCTGCTGCTGCTGCTGCTGC
CGAGGGCGGTATCATCGGCAAAGAAGCCGGCGGCGACGGCGAGGATGGGC
AGGGGGGGGGGCAAGGGACCGACGTCCCCGGGTCGGAGGCGTCCCTGCTG
CTGTCGGCGGCGGTGGTGGAGTCGCACCCGATGGATTCCGACGAAAACTG
CATCTGCATGACCCTGGTCCGACTGGAGCAGGGAGGGTCCCCGCGGATGT
ACGTGGCGGTGGGGACCGGGATGAACGAGCCCCAGGGAGAAGACAAGGCG
GCGCGAGGACGGCTGTTGCTGTTCGAGGTGGACTACGCCTACCGAGCACG
AGAGGAGGGGAAGCATGAGCACGCCGTGAAGCTCAAGCAGGTCTTCGCAA
AGGAACAGCTCGGCCCAGTGTCGGGAGAGTCCGGCCCTGTTTCCGCAGTG
GCGCAGCTCGGTCGTCATCTTGTCCTCAGCGTGGGCAAAAAAGTCATTGT
TAACCGGTGGGACCCAAAGACGTGTACCCTCGAGTTGATCGGTTTTCACG
ATCCTCGGATCTACGTCACGAGCCTGTCCGTGATCAAGAATCGGTTCATC
CTGGTAGGGGATGTCTACGGCTCTGTGCAGCTGGTGGTGTGGAGAGAAGA
AGACCACTCTCTGACGGCCCTGTCCAAGGACCACGAGGACTGCGAGGTGT
TCTCGACGGAGTACCTCATCGACGAGCCGGGCATGGCCATCGTCGTCGCC
GATGGCAGAAGAAACATCAAGGTGTTGCAGTACGCGCCTAACGCCACCAA
TTCTCGAGGGGGTACCAAGCTGCTGTGCCAGTCGGATTTCTACCTCGGCT
CTAGGGTAGCGAAGTTGACAAGACGGCGCACGCGCGGCAACTTGAGGGAC
GGCGCGCGGTACTGCCTCCTCGCGGGAACCCTAGACGGTGGGCTCGGGGC
GATCCTTCCGGTGGACGAGCGCGTGTTCCGGCGGCTCTACGCGCTGCAGG
GCATCATGAGCAACGCTCTCGGCCACAACGGCGCAGCCAACCCGAGGGGA
TACCGGCTCTTCGACCACGGGCCGACGTTCCGCTACGAGACGAAGCAGAA
CATGCTGGACGGGAGCCTGCTGTGGCGGTTCGTGGGTCTCGACGCTCGCA
CGCAGCACGACCTCACGAGGGCCATCGGGACCACGGTGGATCGGGTCATG
GCTAACCTTCTGGACATCGACCTCGCGTCTCTTTTCTAG
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