mRNA_P-littoralis_Contig113.65.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig113.65.1
Unique NamemRNA_P-littoralis_Contig113.65.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig113.65.1 vs. uniprot
Match: D8LD73_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD73_ECTSI)

HSP 1 Score: 588 bits (1515), Expect = 5.510e-199
Identity = 372/764 (48.69%), Postives = 463/764 (60.60%), Query Frame = 1 
Query:    1 LVAAFMASCYGSIGELSSTGPTVVAAFRASPPRMTSNAPN-GNTRIRSQQLDTASLEAARELILKETTGSKRVTKKALLESVGYGVMDPLAYQTFEDSPLLPKLRPTTHVRIAEGIHSFGQEFLGVPRNGAPETGSFMFPPESVTPATTAVSTQNTIAAG------GGSPQFELHPKLPGLGMRMTVVRLGNGELLVHSPVAPTVELLDMMRDSFSAVGPTAKVHLFSASVSPEHWAFLKCWKEIFPSAEIWSVPGPHRRFMGVEVRHDLEHISRLPEQLGGEVEVAVLEGVPMVREAVLFHRPTGTVLSANLLLAMNRNTLEQRVSKGGGQQRGSGPP--LTLYSPPSSSPTPLESSFQKPKKFGEHTDRPAKIETVTDSGMVKGG-RLQRVRWRLLDRTASLLAMNTLAVFTPVKTLMRAFKGNSAALSARVLGWDAKIFVACHGEAPLEGPELKDMLYAALGRYVRAPKKKRDKTKLGTHLLGLIPGRHGGQRDDGEPDGIFEKEGHWPDVPPVGGGGCDGS-----GSGPFSSREPQMAGTSQRQQREIRXXXXXXXXXXXXXTKSTATSSSTDLAGGTITSSGTGSIGFENETNIPGASAAAANASVSRAAMSEVEKRARQYVQEKANATEGLKADNVTATTEGIVGGTGKQSSGKQSPLSSSRTQKAL-----------EAKRRSAKVGNERSSTLPKKNAAEGGAKDSGNPFVVGPDLRYDERPPAPMKGDSKSDDPFDAPFYPFTDEGPLLNGRPL 2214
            ++A  + +C     ++   GP +V AFRASPP  TS+     N+ ++SQQ+D   L+ A ELI  ET+GS+RVTKKALLES+GYGVMDPLAYQTFE+SPL PKLRPTTHVRIA+GIH+FGQEFLGVP    PE G   F   +V  ++ + +T ++   G      GGS QFEL PKLPGLGMRMT++RLG+GELL HSPVAPTVELLDM+RD F AVGPT KVHLFSASVSPEHWAFLK WK IFP+AE+W+VPGPHRR +GVEV HD+E IS +PE+LGGEVEVAVLEGVPMVREA+L HRPTGTVLSA+LLLAM+ + +  + +  GG+ +   P    T +SPP  SPT   SS  +PK+FGEH+   A++ET  DS    GG R +R+RW +LD+TASLL MNTLAVF PVKTL+ AFKGNS A S+RVL WD K+ VACHG++PLEGPELK ML+AALGR    P +    +   T  +   P +                       P  GG G  G      G  P+S R P  +G +                             + ++ GG   S+G G      ET                  M E E RAR+YV++K  A +G  A    A  E      G+   G++ P  S+RT + L           E ++ +A           K  A   GA+   NPFVVG D RYDE P  P+ G++  DDPF+APFYPF  +GP LNGR L
Sbjct:    1 MIALSVMACCCCYSDVKPFGPIMVTAFRASPPPRTSSKKRFENSGLKSQQMDATPLKEALELIAMETSGSRRVTKKALLESIGYGVMDPLAYQTFENSPLPPKLRPTTHVRIADGIHTFGQEFLGVP----PEEGVSSFSEYAVAGSSASETTAHSSGDGTDPSAVGGSQQFELQPKLPGLGMRMTMLRLGSGELLAHSPVAPTVELLDMLRDCFPAVGPTTKVHLFSASVSPEHWAFLKHWKAIFPAAEVWAVPGPHRRLVGVEVDHDIEQISGVPERLGGEVEVAVLEGVPMVREALLLHRPTGTVLSADLLLAMDPSAIAAQDAAAGGEGQRPEPTSSATAFSPPGESPT--TSSSLRPKRFGEHSGSLAEVETSPDSEKKGGGSRWRRLRWGILDKTASLLDMNTLAVFAPVKTLLHAFKGNSGAFSSRVLSWDTKVLVACHGQSPLEGPELKGMLHAALGRQPAEPGRS---SPAVTAAVAEPPEQQAAN------------------APSAGGAGMPGKDKAAGGVSPWSRRLPTTSGAN----------------------------GADNVLGGLRVSAGEGG----GET------------------MLEAEARARRYVRDKL-AGDGAGAAEFVAPPESPKAARGRAFGGERKPAPSARTGEGLGPGQTTPPAKVERQQPAAAXXXXXGDVRDKGEAGGAGAEGGDNPFVVGADTRYDEGPVGPI-GEA-DDDPFEAPFYPFDADGPPLNGRAL 684
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BLAST of mRNA_P-littoralis_Contig113.65.1 vs. uniprot
Match: A0A6H5KD46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD46_9PHAE)

HSP 1 Score: 352 bits (902), Expect = 5.900e-112
Identity = 193/324 (59.57%), Postives = 222/324 (68.52%), Query Frame = 1 
Query:  148 LDTASLEAARELILKETTGSKRVTKKALLESVGYGVMDPLAYQTFEDSPLLPKLRPTTHVRIAEGIHSFGQEFLGVPRNGAPETGSFMF-------PPESVTPATTAVSTQNTIAAGGGSPQFELHPKLPGLGMRMTVVRLGNGELLVHSPVAPTVELLDMMRDSFSAVGPTAKVHLFSASVSPEHWAFLKCWKEIFPSAEIWSVPGPHRRFMGVE---------------------------------------------------VRHDLEHISRLPEQLGGEVEVAVLEGVPMVREAVLFHRPTGTVLSANLLLAMNRNTL 945
            +D   L+ A +LI  ET+GS+RVTKKALLES+GYGVMDPLAYQTFE+SPL PKLRPTTHVRIA+GIH+FGQEFLGVP    PE G   +       PP S T A ++    N  AA GGS  F+L PKLPGLGMRMT++RL +GELL HSPVAPTVELLDM+RD F AVGPT KVHLFSASVSPEHWAFLK WK IFP+AE+W+VPGPHRR MGVE                                                   V HD+E I  +PE+LGGEVEVAVLEGVPMVREA+L HRPTGTVLSA+LLLAM+++ +
Sbjct:    1 MDATPLKEALDLIAMETSGSRRVTKKALLESIGYGVMDPLAYQTFENSPLPPKLRPTTHVRIADGIHTFGQEFLGVP----PEEGVSSYAEYAVVGPPTSETAAHSSGDDGNAHAAVGGSQMFKLQPKLPGLGMRMTMLRLRSGELLAHSPVAPTVELLDMLRDCFPAVGPTTKVHLFSASVSPEHWAFLKHWKAIFPAAEVWAVPGPHRRLMGVEASMGLCGVSARSMKKTTAVATRKLLFPFYYNVSQHLIHPARVVGALFCEAQVDHDIEQICGVPERLGGEVEVAVLEGVPMVREALLLHRPTGTVLSADLLLAMDQSAI 320
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BLAST of mRNA_P-littoralis_Contig113.65.1 vs. uniprot
Match: A0A430DRY7_9SPHN (DUF4336 domain-containing protein n=4 Tax=Sphingomonas TaxID=13687 RepID=A0A430DRY7_9SPHN)

HSP 1 Score: 87.4 bits (215), Expect = 3.850e-15
Identity = 55/149 (36.91%), Postives = 77/149 (51.68%), Query Frame = 1 
Query:  481 GSPQFELHPKLPGLGMRMTVVRLGNGELLVHSPVAPTVELLDMMRDSFSAVGPTAKVHLFSASVSPEHWAFLKCWKEIFPSAEIWSVPG--PHRRFMGVEVRHDLEHISRLPEQLGGEVEVAVLEGVPMVREAVLFHRPTGTVLSANLL 921
            G+P   +   LP   +RMTVVRLGNGEL +HSP+  T  L   +     A+GP    HL + +++  HW FLK W+E +P A  W VPG    R+     VR D +      E    E+E  ++ G    REA  FH  + T+L  +L+
Sbjct:   76 GAPIAPMGITLP---VRMTVVRLGNGELWLHSPIRYTPALAKALE----AIGPIR--HLVAPNIA--HWTFLKAWQEAYPDATTWGVPGLRDRRQVRNSGVRIDCDLQDAAEEPWAAELEQGIVPGAAGFREAYFFHEASRTLLLVDLI 213
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BLAST of mRNA_P-littoralis_Contig113.65.1 vs. uniprot
Match: UPI001ADF2692 (DUF4336 domain-containing protein n=1 Tax=Roseomonas sp. SG15 TaxID=2820811 RepID=UPI001ADF2692)

HSP 1 Score: 86.7 bits (213), Expect = 2.380e-14
Identity = 53/151 (35.10%), Postives = 83/151 (54.97%), Query Frame = 1 
Query:  511 LPG--LGMRMTVVRLGNGELLVHSPVAPTVELLDMMRDSFSAVGPTAKVHLFSASVSPEHWAFLKCWKEIFPSAEIWSVPGPHRRFM----GVEVRHDLEHISRLPEQLGGEVEVAVLEGVPMVREAVLFHRPTGTVLSANLLLAMNRNTL 945
            LPG  LG+RMTV+RL +G LL+HSP   ++ L    + +   +GP    HL + +++  HW FLK WK+  P A  W+ PG   R      GV + +DL   +  PE  GG +E+  + G     E  +FHRP+ T++  +L++ +  + L
Sbjct:  157 LPGGPLGVRMTVIRLPDGGLLLHSPTPFSLAL----KAALDRIGPIR--HLVAPNIA--HWMFLKDWKQACPEAASWAAPGLRERGQVRRSGVRLDYDLSETA--PESWGGAIELVGIPGAIGFHEMAMFHRPSRTLMMTDLVMNLEPSKL 297
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BLAST of mRNA_P-littoralis_Contig113.65.1 vs. uniprot
Match: UPI001E57D75D (DUF4336 domain-containing protein n=1 Tax=Sphingomonas sp. PL-96 TaxID=2887201 RepID=UPI001E57D75D)

HSP 1 Score: 81.6 bits (200), Expect = 3.150e-13
Identity = 55/147 (37.41%), Postives = 78/147 (53.06%), Query Frame = 1 
Query:  505 PKLPG---LGMRMTVVRLGNGELLVHSPVAPTVELLDMMRDSFSAVGPTAKVHLFSASVSPEHWAFLKCWKEIFPSAEIWSVPGPHRRFM----GVEVRHDLEHISRLPEQL-GGEVEVAVLEGVPMVREAVLFHRPTGTVLSANLL 921
            P  PG   L +RMTVVRL NG+LL+HSP+  T  L   +     A+GP    HL + +++  HW F+K W+ I+P A  W VPG   R      GV +  DL+     PE     E+E  ++ G     EA  FH+P+ T+L  +L+
Sbjct:   74 PIAPGGLTLPVRMTVVRLANGDLLLHSPIRYTPALARELE----AIGPIR--HLIAPNIA--HWTFVKSWQAIYPEATTWGVPGLRDRRQVRTSGVRIDRDLQDA---PEAAWADELEQGLVPGAAGFCEAYFFHKPSRTLLLVDLI 209
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BLAST of mRNA_P-littoralis_Contig113.65.1 vs. uniprot
Match: A0A347UD87_9RHOB (DUF4336 domain-containing protein n=2 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A347UD87_9RHOB)

HSP 1 Score: 79.7 bits (195), Expect = 6.120e-13
Identity = 45/133 (33.83%), Postives = 77/133 (57.89%), Query Frame = 1 
Query:  529 RMTVVRLGNGELLVHSPVAPTVELLDMMRDSFSAVGPTAKVHLFSASVSPEHWAFLKCWKEIFPSAEIWSVPGPHRRFM--GVEVRHDLEHISRLPEQLGGEVEVAVLEGVPMVREAVLFHRPTGTVLSANLL 921
            RMTVVRL NG++ +HSP     ++ D +RD  +A+GP    HL + +    H+A++  W++ FP A  ++ PG  +R    G+ +R D +     P    G++E  ++EG  + REAV FH+ + T++  +L+
Sbjct:   36 RMTVVRLKNGDIWLHSPT----KICDSLRDEVTALGPVC--HLIAPNWI--HYAYIAEWQKAFPKARAYAAPGVVKRARKHGMALRFDEDLTQTPPTAWAGQIEQMIVEGSKIHREAVFFHKHSKTLILTDLI 160
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BLAST of mRNA_P-littoralis_Contig113.65.1 vs. uniprot
Match: UPI000ADD5C71 (DUF4336 domain-containing protein n=2 Tax=Roseomonas TaxID=125216 RepID=UPI000ADD5C71)

HSP 1 Score: 82.0 bits (201), Expect = 6.310e-13
Identity = 48/139 (34.53%), Postives = 74/139 (53.24%), Query Frame = 1 
Query:  520 LGMRMTVVRLGNGELLVHSPVAPTVELLDMMRDSFSAVGPTAKVHLFSASVSPEHWAFLKCWKEIFPSAEIWSVPGPHRRFM----GVEVRHDLEHISRLPEQLGGEVEVAVLEGVPMVREAVLFHRPTGTVLSANLLL 924
            LG RMTV+RL +G LL+HSP   +++L    +    A+GP    HL + S    HW F+K W +  P A  W+ PG   R      G+ + HDL   +  P + G  +++  + GV    E  +FHRPT T++  +L++
Sbjct:  168 LGTRMTVIRLLDGGLLLHSPTRFSLKL----KGELEAIGPVR--HLVAPSFG--HWTFMKDWSDACPEATTWATPGLRTRGQVRRSGLRLDHDLAETA--PSEWGDAIQLVPVPGVAGFTETAMFHRPTETLVLTDLVI 296
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BLAST of mRNA_P-littoralis_Contig113.65.1 vs. uniprot
Match: A0A1X1GPI3_STROR (DUF4336 domain-containing protein n=4 Tax=Streptococcus TaxID=1301 RepID=A0A1X1GPI3_STROR)

HSP 1 Score: 79.3 bits (194), Expect = 9.710e-13
Identity = 50/158 (31.65%), Postives = 81/158 (51.27%), Query Frame = 1 
Query:  457 QNTIAAGGGSPQFELHP-KLPGLGMRMTVVRLGNGELLVHSPVAPTVELLDMMRDSFSAVGPTAKVHLFSASVSPEHWAFLKCWKEIFPSAEIWSVPGPHRRF--MGVEVRHDLEHISRLPEQLGGEVEVAVLEGVPMVREAVLFHRPTGTVLSANLL 921
            QN   A G   Q ++   KLP    RMTV++L +G+L +HSP+AP  EL   +     A+G  A    +  S +  H+A++  WK+ +P A+ WS PG   R     V+V  D       P+    E++  + +G  ++ E V FH+ T T++  +L+
Sbjct:   20 QNIWIADGDLIQMDMKVFKLP-FQTRMTVIKLNDGKLWIHSPIAPNEELFTEL----DALGRVA----YLISPNKIHYAYIADWKKRYPHAQTWSSPGVEERVKSQNVKVEFDSPLADESPDLWSDEIDQLIFKGSSVIEEVVFFHKSTKTLIVTDLI 168
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BLAST of mRNA_P-littoralis_Contig113.65.1 vs. uniprot
Match: A0A1M6GAY2_9PROT (Uncharacterized protein n=1 Tax=Roseomonas rosea TaxID=198092 RepID=A0A1M6GAY2_9PROT)

HSP 1 Score: 81.6 bits (200), Expect = 1.070e-12
Identity = 49/139 (35.25%), Postives = 74/139 (53.24%), Query Frame = 1 
Query:  520 LGMRMTVVRLGNGELLVHSPVAPTVELLDMMRDSFSAVGPTAKVHLFSASVSPEHWAFLKCWKEIFPSAEIWSVPGPHRRFM----GVEVRHDLEHISRLPEQLGGEVEVAVLEGVPMVREAVLFHRPTGTVLSANLLL 924
            LG+RMTV+RL +G LL+HSP   T  L    +     +GP    HL + +++  HW FLK W++  P    W+ PG   R      GV + HDL   +  P + GG +EV  + G    +E  +FH PT T++  +L++
Sbjct:  167 LGVRMTVIRLPDGGLLLHSPTRFTYAL----KRELERLGPIR--HLVAPNIA--HWTFLKEWQDHLPETVSWAAPGLRDRAQVRRSGVRLDHDL--FATTPAEWGGAIEVVPVPGAAGFQEMAMFHAPTRTLVLTDLVM 295
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BLAST of mRNA_P-littoralis_Contig113.65.1 vs. uniprot
Match: W1Q1B4_ABIDE (Uncharacterized protein n=4 Tax=Abiotrophia TaxID=46123 RepID=W1Q1B4_ABIDE)

HSP 1 Score: 79.0 bits (193), Expect = 1.250e-12
Identity = 48/150 (32.00%), Postives = 75/150 (50.00%), Query Frame = 1 
Query:  529 RMTVVRLGNGELLVHSPVAPTVELLDMMRDSFSAVGPTAKVHLFSASVSPE--HWAFLKCWKEIFPSAEIWSVPGPHRRFMG--VEVRHDLEHISRLPEQLGGEVEVAVLEGVPMVREAVLFHRPTGTVLSANLLLAMNRNTLEQRVSKG 966
            RMTVV+L +G L  HSP+AP   L   +     ++GP A  HL    VSP   H+A++  W+  +P A+ WS PG  +R     + V  D    +R P    G+++  +  G   V E V FHR + T++  +L+     N +   + +G
Sbjct:   41 RMTVVKLADGSLWCHSPIAPNESLFQAL----DSLGPVA--HL----VSPNKIHYAYIPDWQRRYPQAKAWSSPGVEKRAASQKIAVNFDATLENRAPADWAGQLDQLIFSGSRAVEEVVFFHRASQTLIVTDLIENFEVNKMPHALQRG 180
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig113.65.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD73_ECTSI5.510e-19948.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KD46_9PHAE5.900e-11259.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A430DRY7_9SPHN3.850e-1536.91DUF4336 domain-containing protein n=4 Tax=Sphingom... [more]
UPI001ADF26922.380e-1435.10DUF4336 domain-containing protein n=1 Tax=Roseomon... [more]
UPI001E57D75D3.150e-1337.41DUF4336 domain-containing protein n=1 Tax=Sphingom... [more]
A0A347UD87_9RHOB6.120e-1333.83DUF4336 domain-containing protein n=2 Tax=Rhodobac... [more]
UPI000ADD5C716.310e-1334.53DUF4336 domain-containing protein n=2 Tax=Roseomon... [more]
A0A1X1GPI3_STROR9.710e-1331.65DUF4336 domain-containing protein n=4 Tax=Streptoc... [more]
A0A1M6GAY2_9PROT1.070e-1235.25Uncharacterized protein n=1 Tax=Roseomonas rosea T... [more]
W1Q1B4_ABIDE1.250e-1232.00Uncharacterized protein n=4 Tax=Abiotrophia TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig113contigP-littoralis_Contig113:272248..279842 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1234595.C725_2090
PFAMsDUF4336
Model size2223
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
Exons12
Evalue2.2e-14
EggNOG OGsCOG4221@1|root,COG4221@2|Bacteria
Descriptionoxidoreductase activity
Cds size2208
COG categoryIQ
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig113.65.1prot_P-littoralis_Contig113.65.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig113 272248..279827 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789458.4329197-CDS-P-littoralis_Contig113:272247..2723711680789458.4329197-CDS-P-littoralis_Contig113:272247..272371Pylaiella littoralis U1_48CDSP-littoralis_Contig113 272248..272371 -
1680789458.4424224-CDS-P-littoralis_Contig113:272976..2734821680789458.4424224-CDS-P-littoralis_Contig113:272976..273482Pylaiella littoralis U1_48CDSP-littoralis_Contig113 272977..273482 -
1680789458.4507692-CDS-P-littoralis_Contig113:273806..2740321680789458.4507692-CDS-P-littoralis_Contig113:273806..274032Pylaiella littoralis U1_48CDSP-littoralis_Contig113 273807..274032 -
1680789458.4588542-CDS-P-littoralis_Contig113:274331..2744481680789458.4588542-CDS-P-littoralis_Contig113:274331..274448Pylaiella littoralis U1_48CDSP-littoralis_Contig113 274332..274448 -
1680789458.468514-CDS-P-littoralis_Contig113:274882..2750761680789458.468514-CDS-P-littoralis_Contig113:274882..275076Pylaiella littoralis U1_48CDSP-littoralis_Contig113 274883..275076 -
1680789458.4808304-CDS-P-littoralis_Contig113:275241..2753521680789458.4808304-CDS-P-littoralis_Contig113:275241..275352Pylaiella littoralis U1_48CDSP-littoralis_Contig113 275242..275352 -
1680789458.4885638-CDS-P-littoralis_Contig113:275644..2758151680789458.4885638-CDS-P-littoralis_Contig113:275644..275815Pylaiella littoralis U1_48CDSP-littoralis_Contig113 275645..275815 -
1680789458.4980311-CDS-P-littoralis_Contig113:276232..2763581680789458.4980311-CDS-P-littoralis_Contig113:276232..276358Pylaiella littoralis U1_48CDSP-littoralis_Contig113 276233..276358 -
1680789458.507758-CDS-P-littoralis_Contig113:276713..2768001680789458.507758-CDS-P-littoralis_Contig113:276713..276800Pylaiella littoralis U1_48CDSP-littoralis_Contig113 276714..276800 -
1680789458.515879-CDS-P-littoralis_Contig113:277135..2774441680789458.515879-CDS-P-littoralis_Contig113:277135..277444Pylaiella littoralis U1_48CDSP-littoralis_Contig113 277136..277444 -
1680789458.527764-CDS-P-littoralis_Contig113:278071..2781761680789458.527764-CDS-P-littoralis_Contig113:278071..278176Pylaiella littoralis U1_48CDSP-littoralis_Contig113 278072..278176 -
1680789458.538415-CDS-P-littoralis_Contig113:279695..2798271680789458.538415-CDS-P-littoralis_Contig113:279695..279827Pylaiella littoralis U1_48CDSP-littoralis_Contig113 279696..279827 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789458.5492635-UTR-P-littoralis_Contig113:279827..2798421680789458.5492635-UTR-P-littoralis_Contig113:279827..279842Pylaiella littoralis U1_48UTRP-littoralis_Contig113 279828..279842 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig113.65.1

>prot_P-littoralis_Contig113.65.1 ID=prot_P-littoralis_Contig113.65.1|Name=mRNA_P-littoralis_Contig113.65.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=736bp
MASCYGSIGELSSTGPTVVAAFRASPPRMTSNAPNGNTRIRSQQLDTASL
EAARELILKETTGSKRVTKKALLESVGYGVMDPLAYQTFEDSPLLPKLRP
TTHVRIAEGIHSFGQEFLGVPRNGAPETGSFMFPPESVTPATTAVSTQNT
IAAGGGSPQFELHPKLPGLGMRMTVVRLGNGELLVHSPVAPTVELLDMMR
DSFSAVGPTAKVHLFSASVSPEHWAFLKCWKEIFPSAEIWSVPGPHRRFM
GVEVRHDLEHISRLPEQLGGEVEVAVLEGVPMVREAVLFHRPTGTVLSAN
LLLAMNRNTLEQRVSKGGGQQRGSGPPLTLYSPPSSSPTPLESSFQKPKK
FGEHTDRPAKIETVTDSGMVKGGRLQRVRWRLLDRTASLLAMNTLAVFTP
VKTLMRAFKGNSAALSARVLGWDAKIFVACHGEAPLEGPELKDMLYAALG
RYVRAPKKKRDKTKLGTHLLGLIPGRHGGQRDDGEPDGIFEKEGHWPDVP
PVGGGGCDGSGSGPFSSREPQMAGTSQRQQREIRRPPNQQQQPPATETKS
TATSSSTDLAGGTITSSGTGSIGFENETNIPGASAAAANASVSRAAMSEV
EKRARQYVQEKANATEGLKADNVTATTEGIVGGTGKQSSGKQSPLSSSRT
QKALEAKRRSAKVGNERSSTLPKKNAAEGGAKDSGNPFVVGPDLRYDERP
PAPMKGDSKSDDPFDAPFYPFTDEGPLLNGRPLDK*
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mRNA from alignment at P-littoralis_Contig113:272248..279842-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig113.65.1 ID=mRNA_P-littoralis_Contig113.65.1|Name=mRNA_P-littoralis_Contig113.65.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7595bp|location=Sequence derived from alignment at P-littoralis_Contig113:272248..279842- (Pylaiella littoralis U1_48)
CTCGTCGCTGCGTTTATGGCATCGTGTTATGGCAGCATTGGCGAGCTCTC
TAGCACAGGACCGACAGTGGTAGCGGCTTTCCGAGCGAGCCCGCCGCGAA
TGACATCGAACGCGCCTAATGGAAACACTCGCATCAGGTCTCAGCAGGTT
CGTGTGTGTGTGTAGGTGTGTTTGTTCGTCCCTTTCATTCTGGGCACTTT
CAAAATCCACAATGCTGACTGTTAGTCCAGTGGTCCTCGTACTTCTTGAA
AGGCAGCAGTCTCCACCTTTCCGTGTGAGTCCGTGTGAGTGGGTGTATCC
AGCCGGGGTCACATAGAAAGGAGGTCGGTCACAGTGGCTGCTACCGTATA
CCAGGGTATGCTTGTACAAGCGGTATTAGGCCTGAACCTAAAGCATGCGG
CTAAGGACGACAAAATGTTTGCTGAGACGACGGCTGCGACTCCCCGTATC
CATCGCCGTCTAGCAATGCTACGGAATCATGTTTCACGGGACGGCCGAAT
CAGCGCCGCGAGAAGTACTCTGGTACTGTCACTACAGCCCGCTGTGCGGG
GAAATCGATCAAAGATGGCGCCTCTGGCTGACTTTATTTAGCAAAAGACA
TGCCTAAGGCGCTTCGGAGTCCATCTCACTACTCAGTCAGCGCTGACAGA
GCATTCGTAGTCTGTTACTCCGTATAATGGACTCATCCTTTATTTTAGCA
AAAGATATGCGGCAGACTCTTTGAACTCCCCAATACTCAGCCCGTATCTA
TCTAAGACATGCGGTAGGCTCTTTGACCTTCCCAGGCAGTTATCTCCGGG
GCCGGACCCCTCGCCAGTCGCTGGAAAGTCTTAGGTACCGTAACTGGGAA
TCGAACCAGCGGTCAATTTTTTTTTATAACGGCTAGCCTATTTACTATTC
AATCAGCGTTTGCTTGATAAAGGCTAGTCCATCCGACTACTCGGTCAGCT
CTAGCTGCGTAGTAAAGTGAACTACTTTATCCAACATGATTGGCCCCCTC
TTATCCATTGTGTATATGCTGTGGCACCACAAGATGCACTCGTAACATCC
AACATTCAGCGAGGCTCGACCTCGTACAGCTTTTGGGGTCTGTACAATTT
CAATGGAGCCCTAGCTGACAAGCCCTTGGTCTGTTCGGCTGCTGTGTATA
TCAGAACTACAGCTGATGGTCGCTTCTGAGATACACGGGTGTTGTACAGT
TTGCTCGGCCCCGATCGTCCTTGCTGTTGCGCATCCACAAAGTATTTCAC
AGAAAGTAACTCGAGACGCTCCAGGAGGGCAAGGTCAGCCACGTAGGCGT
GTTACGAAGGTGCAACTACATCAGAGGAGGAATCATCATCCAATTGATAT
CACGTTGATGGTGTTCACTCACCATTCGTGAGCATCTTGGAACAAAAAAG
TGACATCCACCACACGACATATTGATCCACTGCACTTGCTGTCATTTTTC
AACAAAGCACACAAATAAACGACATACAACACACAACACACAACACTAAA
AAAATCGAAGTTCATGTCTTGTTACGAGCTACAGCGGAAAAAATTGGTAA
GTTTACACAGGTGATATTTTTTGAGGTTCTTCTTGGCGGTATTCGTTTGA
TGAAGATAGGACCATGGCACATAACATGGTCTATGGCATTTCAACGTGTT
GGACGTTTGAAAACAGCTGGACACTGCCTCGCTTGAAGCTGCTCGTGAGC
TCATCCTAAAGGAGACCACTGGCAGCAAACGCGTCACGAAGAAAGCTCTT
CTCGAATCCGTCGGCTACGGGGTGAGTACCGCACAGACGTTGCGGTTGAA
CAACAACTCTGATCCGCAGCCGATTGTATGACCAGGTACTAGACTAGGTG
GCGTGGCGCTTAGGAGCTCCAGATAGCCTAAGCTGTTTGTTTCCCACTGT
TCTAAGACCAGTAGAACTCGGAATGGGCTTGTGCTGACGTAGGGACAAAC
AACTTTAGCGTTCAGGCATAAAGCAAATACAAAATATGAAACTACCCTCG
TGCGCAAAGGGAAGAATTCCAAGACACAACTGTGTCCAATATCTTGATCC
GTACAGCAACCCCCCCCCCCCTGTCGGGGTAAGTTTAGTTCCTGAATGGC
CCCTGTCGCAGCTAGACGCGGTGTACGATCACTCGAAGAGCACTCGGCTC
GAGTTCGAGCACACACTGTTTTTCTAAGATACATCTTGGGGTGAACCTCC
TAGATTAACGTACAGGAAATCATCGCTGGAGTGACTTCTCGAAGAAGGAG
GACCGGGAGGGGGAGGGGTTGCTCATAATCTGTATGGGCTGAGTAGGGGG
AAAGCTATGTCCACCCTGATTCGCTACTACCCTCCGTCTACCCGTCATAC
CGCTCGGGAATCATCCTGAAACTGTATGCGCGACCCCCCCCCCCAAAGGT
GATGGACCCGTTGGCCTATCAGACGTTCGAGGATTCCCCCCTGCTTCCGA
AGCTTCGACCTACGACCCACGTCAGAATCGCCGAGGGCATTCACTCCTTC
GGGCAAGAGTTTCTCGGAGTTCCGCGGAACGGCGCACCCGAAACAGGCTC
TTTCATGTTTCCTCCGGAGTCGGTCACACCGGCCACAACAGCGGTTTCCA
CTCAAAATACCATTGCCGCTGGTGGAGGGTCGCCGCAATTCGAGCTCCAC
CCTAAACTCCCCGGCCTGGGGATGAGGATGACGGTGGTGCGGTTAGGAAA
CGGAGAGGTGAGGGTGGTAGGTGGAAGGAGCTCAGGGGGCATTGCCCGAC
CCGTATTTGCGTTGCTACTGCTTTGGCTGTCTCATATGACGTGGGTTGTG
GTGTTGAAACCCAAATAGCTTCCTTGCAGTAATTCACCTTCTCTCGTGAT
CGAAGACGAAAGCGCTGTGCGTCAGTCGTAGCAGCAGAAATCCTTGTGGG
AGAAAGCTTCGTTCCATTTTGTTTGGGGGGCTTATGACGGAATTGATCTC
ACTCCCTAATCCCACCCCGCTACTCTTTATTTCTCCCCACCGGGGCTGCG
GTGCTTGCGGTACGTGGTCGTGCCACTACGAACGTGGCGCAGCTTCTCGT
TCACTCTCCGGTAGCGCCTACTGTGGAACTCCTAGACATGATGCGGGATT
CGTTTTCCGCCGTCGGACCGACCGCCAAGGTAAGGACCACCTCCTTTTTG
TGTATTGCTTTATCTCGCCACGCGGACACATCCGTGATATTGTTCGCTTG
CAAAACACCCAGCCCCAGTCCGCAAGGGGTTCCTGTACTCATGACATGTG
TTGATGCGGTTGCGTCGAGCACCTACCCTTTTTAGGCTTCGAAGATATCC
CCCCTCTTTATCGATAGCACGGCGCGACAGTTTCTACGGAATCGACTAAG
ATGTCAAGACAAAAAATCCGTAAAGCAGTCACGACTCCCTACCATCCTCA
ATGGAATTCAGTCTTGCCGACGAAATCGAAAGCCAAGCGCCGCACCCACT
CGCTTCCGCCCTCCTTTGACTCGTACGCCTTTAGGTGCACCTCTTCAGCG
CATCGGTGTCTCCGGAGCATTGGGCTTTCCTCAAGTGTTGGAAGGAAATT
TTCCCGTCGGCGGAGATCTGGTCTGTTCCCGGTCCCCATCGACGCTTTAT
GGGCGTGGAGGTGAGTTGAGCGCGGCATATGGCAGCCTGACGGCTACCAA
TAACTACAGGAGATGTTCAAGAATAATGTTGTCAGAAGCACACTGCGGTG
AAAGAGCAAATACATTTTTTCAGGTAAAAACATTATTTAGTTACTACGCA
CGGCACATAAACACTTTATTTCAGGTCACTACGTATGCGTAGAATATGCA
TAATAAGCCTCAACGACGATTACTGCTGGTGTCAAGCGAACTTTGAGGGC
TTGAAACATTACACGTGCTGCGTTCTGCTTGGGAACTCGTCTGAAACGAC
CAACGGTGGGGTGCTACTACGGAGCAGGCACATTATCGTACATCCTCGCA
CTATCCCCCTTCCATTCGGCTAAATCTGAATGCCAATCCGACTCGGTCTT
GGCGTGCCTCGCAAAATATGAGTGCAGGTGAGGCATGACCTCGAACATAT
ATCTCGGCTACCGGAGCAGCTGGGCGGCGAAGTGGAAGTGGCGGTTCTGG
AGGGAGTCCCTATGGTCAGAGAGGCGGTGCTTTTTCACCGACCCACGGGA
ACGGTGTTATCGGCTAACCTCTTGCTGGCCATGAACCGGAATACTCTGGT
GAGACTTAACTTCGAGCACACTAACAGCGGGCGTTTCACGTTGACTCTTG
TGCGCTTCTTTTCCACTAAAGCACAATTGTACTACGATACCGTAGTCCGT
CCCTGCAAGGTCAGTAAGAAGGCGACGCGAGCGAACTCCTTAGCACGGTA
TACTGCAGCTGTTTCTCAAACTGCAGAAAATCTCTGAAGTTAATTAAAGA
CTTGCTTTGTCAATATGTGATCGTTGCCACATCTCGTGCGTTCGCTCAAG
GATACGTGCTGCATAACTTACGCATATGCTGCCGCTGCAGGAACAACGCG
TTTCCAAAGGGGGGGGACAGCAACGCGGATCCGGTCCTCCTCTCACTCTC
TATTCCCCGCCTTCGTCATCACCAACCCCCTTAGAGTCTTCATTTCAAAA
GGTGCGTGCACGATGGACACTTTTGAAGGTCCATGGTAATTGGAAAACAG
CAAGACGTGATTCAACGCTCTCCCCTCCCCCTCCTTTTCTCTCAACTTGA
ATCACGCATAAACGGGAATTCCCCCCGAAATTCATAACCGACATACCTTC
CTGTATGCCAGCACAGCCCAAGAAGTTCGGAGAACACACCGACAGGCCGG
CAAAGATTGAAACGGTGACGGATTCGGGTATGGTGAAAGGAGGAAGGTTG
CAACGTGTCCGGTGGAGGCTACTGGACAGAACCGCCTCTCTCCTGGCGAT
GAACACCCTCGCGGTGTTTACCCCAGTCAAGACCCTAATGCGCGCCTTTA
AGGGAAACAGGTGACCGTTGCTTGTTCTCTCTATCGCCCGGCCTCCTCGA
GGGTTCCAAACAGGTCCCGAGAGGTTTGGTTGTAACGAGGTGCTCCCCTC
AGCACGTGATACCAACTCGATTCTACAGGGAACGGTATCCTGCTTTTCAA
ACCTTCTGTACCTCACTTCCACTCGTTCACGTGCCCCTCGGTAGACGCAG
GGTGCCGTACACTTGATTCTCTGTTTTAACTTTATTGACAGGGAGCTGAG
AGGTACTGTAGCCCCGCTGGTACCCTTTTTCGTCCGACCTAGTACTCTTG
GAATCTCAGACTAAATACTGCCTTCAAAAATCCCCCTGGGTGGCCGAGAG
GTGGAATGGCGAGATTAGCAGCGACGCGAGTACACACACCGCCGCTCTGA
CGCCTTTTATCCCCTCCCGAAATCGTGGTCATGTTTAAAAACAGCGCTGC
CTTATCTGCCCGGGTACTGGGTTGGGATGCAAAGATATTTGTCGCCTGCC
ATGGAGAGGCACCGCTGGAAGGACCCGAGCTGAAAGATATGCTCTACGCT
GCTCTCGGCAGGTAAATGACCTTGAAGCTATGTAGCGGGGTGCTCACCCC
CGTAGTTCGGATGCCCCTGCCGTCTTGGGGGGAATTGAGAGTAACCTCGA
AAGCCAGGACCTGACCCCCCTGGAAGGATTTCTTCCGTCTCACCAGAAAA
CGGAACCATAGCACGCACAAAATGCACGATCGATGGTCAATTTTGGTCGG
CAAACCCGTATCCCTGCCGATATCAAGGTTTATTTTCGTGCTCTCTGCCG
TTCAGCAGCACCCCGTTACGGGCACAATTCATCTTTCTCTACCTATGCGC
GCCAACAAAGGTATGTCCGAGCTCCCAAGAAGAAACGCGACAAGACAAAA
TTAGGGACACATCTGCTAGGCTTGATTCCCGGACGGCACGGCGGTCAGAG
GGATGACGGAGAACCCGACGGGATCTTCGAAAAGGAGGGACATTGGCCTG
ATGTCCCGCCTGTCGGTGGTGGCGGTTGCGATGGTAGCGGTAGCGGCCCC
TTCTCATCTAGAGAACCGCAAATGGCAGGGACATCGGTTTCGACATCCTC
CCCTCCCGAGACCTCGAAATATGACACTAGGGATCCCAAAATAGTCAATC
GAACGAGAGCCTCCACGGTCGCTATTTCAACGGCGTCGCCACCTTCTTCC
CCCCAGATCGCCGTTAACGGTGAACAGGATCCCCCAAAAGATGCTTTGAC
CCCAGCAGTCTCTTCAATCGTCGCCAGTGCCCCTTCCGACAGTAAAGGTG
TCGGTTTCAACATCGCTGGCATGGTCTCTGGGTGGGGTAAGCGCAGCACG
GACCCACCTCCTGCTACCCGTGAAATATATAGCGGCGGCAAGAGCCAATC
GGCGGAACAGCAGCGGCAGCAGCGGGAAATTCGACGGCCGCCCAACCAGC
AACAACAGCCACCCGCGACCGAAACAAAATCTACAGCGACTTCATCTTCC
ACCGATTTAGCCGGGGGGACCATTACATCCTCAGGTACGGGAAGCATTGG
CTTCGAGAACGAAACCAATATTCCAGGGGCGAGCGCCGCCGCGGCCAACG
CGAGTGTCTCCCGCGCAGCTATGTCCGAGGTGGAAAAACGCGCGAGGCAG
TACGTGCAGGAGAAAGCGAACGCCACCGAGGGCCTCAAAGCTGATAATGT
CACGGCTACAACCGAGGGCATCGTCGGGGGGACAGGGAAGCAGTCATCCG
GAAAACAATCCCCGTTGTCGTCTTCTAGAACACAGAAGGCGCTCGAAGCG
AAGAGAAGGTCAGCGAAGGTGGGAAACGAACGATCGTCAACTTTGCCGAA
GAAGAATGCGGCGGAAGGTGGTGCCAAGGACAGCGGAAACCCTTTCGTTG
TGGGGCCGGATTTAAGGTGAGGTAAATGGCGCACTGCTTAGCACAAATGA
TGCGCGATTGCCCCCATTGCACAGACCCTTCTTTGCATATTGTGCCAACA
AAAAATTTGTGTGCCTTGTACCACGCGGTTTATTTCCCAATGGTTCACAG
ATTATTTTTAGAGTATACGTGCGCATGGTGCTTCGCGTATTAGCCAAGCA
CCTTTGTGGTGTTCGCATACCTTGCGCCTGATGCGTTTTTCTTGAGCTCC
ATCGTGAGGTGTTTAGGTATCGCGCAAATTTCGTTGTCTGTGTGGTTATA
AGCTCACGATATCCTTGTCTGACCTCCGTCAGCTGTTGCCGCGATCGGGC
CTGCGTCTTGACAGGCCCCGCCTGTGCCGGCTGCTTCTTTCACACACATA
CACACGCGCGCACAAACACACACAAATTTGAACGGATGACCCTATGCGAC
ACAGCGACATACGTTCGAGGTTAGAAAAGAAAGAAAGCAGAATCTCACGG
TACTCACGTACGGTGCGGCCCCTGAGGACGACTTGCGCCTGTCACTGCCA
AGAAGGGCTTTGTTAATCTCATTCCCTGGTATACTTGATGCTTGGTTGCT
TGCATGCCTCATCATCCATAGGTACGACGAACGGCCGCCGGCGCCGATGA
AAGGGGACAGCAAAAGCGACGATCCGTTCGATGCGCCGTTCTACCCCTTC
ACGGACGAGGGACCTCTGCTGAACGGTCGACCCCTCGACAAATGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig113:272248..279842-

>mRNA_P-littoralis_Contig113.65.1 ID=mRNA_P-littoralis_Contig113.65.1|Name=mRNA_P-littoralis_Contig113.65.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2208bp|location=Sequence derived from alignment at P-littoralis_Contig113:272248..279842- (Pylaiella littoralis U1_48)
ATGGCATCGTGTTATGGCAGCATTGGCGAGCTCTCTAGCACAGGACCGAC
AGTGGTAGCGGCTTTCCGAGCGAGCCCGCCGCGAATGACATCGAACGCGC
CTAATGGAAACACTCGCATCAGGTCTCAGCAGCTGGACACTGCCTCGCTT
GAAGCTGCTCGTGAGCTCATCCTAAAGGAGACCACTGGCAGCAAACGCGT
CACGAAGAAAGCTCTTCTCGAATCCGTCGGCTACGGGGTGATGGACCCGT
TGGCCTATCAGACGTTCGAGGATTCCCCCCTGCTTCCGAAGCTTCGACCT
ACGACCCACGTCAGAATCGCCGAGGGCATTCACTCCTTCGGGCAAGAGTT
TCTCGGAGTTCCGCGGAACGGCGCACCCGAAACAGGCTCTTTCATGTTTC
CTCCGGAGTCGGTCACACCGGCCACAACAGCGGTTTCCACTCAAAATACC
ATTGCCGCTGGTGGAGGGTCGCCGCAATTCGAGCTCCACCCTAAACTCCC
CGGCCTGGGGATGAGGATGACGGTGGTGCGGTTAGGAAACGGAGAGCTTC
TCGTTCACTCTCCGGTAGCGCCTACTGTGGAACTCCTAGACATGATGCGG
GATTCGTTTTCCGCCGTCGGACCGACCGCCAAGGTGCACCTCTTCAGCGC
ATCGGTGTCTCCGGAGCATTGGGCTTTCCTCAAGTGTTGGAAGGAAATTT
TCCCGTCGGCGGAGATCTGGTCTGTTCCCGGTCCCCATCGACGCTTTATG
GGCGTGGAGGTGAGGCATGACCTCGAACATATATCTCGGCTACCGGAGCA
GCTGGGCGGCGAAGTGGAAGTGGCGGTTCTGGAGGGAGTCCCTATGGTCA
GAGAGGCGGTGCTTTTTCACCGACCCACGGGAACGGTGTTATCGGCTAAC
CTCTTGCTGGCCATGAACCGGAATACTCTGGAACAACGCGTTTCCAAAGG
GGGGGGACAGCAACGCGGATCCGGTCCTCCTCTCACTCTCTATTCCCCGC
CTTCGTCATCACCAACCCCCTTAGAGTCTTCATTTCAAAAGCCCAAGAAG
TTCGGAGAACACACCGACAGGCCGGCAAAGATTGAAACGGTGACGGATTC
GGGTATGGTGAAAGGAGGAAGGTTGCAACGTGTCCGGTGGAGGCTACTGG
ACAGAACCGCCTCTCTCCTGGCGATGAACACCCTCGCGGTGTTTACCCCA
GTCAAGACCCTAATGCGCGCCTTTAAGGGAAACAGCGCTGCCTTATCTGC
CCGGGTACTGGGTTGGGATGCAAAGATATTTGTCGCCTGCCATGGAGAGG
CACCGCTGGAAGGACCCGAGCTGAAAGATATGCTCTACGCTGCTCTCGGC
AGGTATGTCCGAGCTCCCAAGAAGAAACGCGACAAGACAAAATTAGGGAC
ACATCTGCTAGGCTTGATTCCCGGACGGCACGGCGGTCAGAGGGATGACG
GAGAACCCGACGGGATCTTCGAAAAGGAGGGACATTGGCCTGATGTCCCG
CCTGTCGGTGGTGGCGGTTGCGATGGTAGCGGTAGCGGCCCCTTCTCATC
TAGAGAACCGCAAATGGCAGGGACATCGCAGCGGCAGCAGCGGGAAATTC
GACGGCCGCCCAACCAGCAACAACAGCCACCCGCGACCGAAACAAAATCT
ACAGCGACTTCATCTTCCACCGATTTAGCCGGGGGGACCATTACATCCTC
AGGTACGGGAAGCATTGGCTTCGAGAACGAAACCAATATTCCAGGGGCGA
GCGCCGCCGCGGCCAACGCGAGTGTCTCCCGCGCAGCTATGTCCGAGGTG
GAAAAACGCGCGAGGCAGTACGTGCAGGAGAAAGCGAACGCCACCGAGGG
CCTCAAAGCTGATAATGTCACGGCTACAACCGAGGGCATCGTCGGGGGGA
CAGGGAAGCAGTCATCCGGAAAACAATCCCCGTTGTCGTCTTCTAGAACA
CAGAAGGCGCTCGAAGCGAAGAGAAGGTCAGCGAAGGTGGGAAACGAACG
ATCGTCAACTTTGCCGAAGAAGAATGCGGCGGAAGGTGGTGCCAAGGACA
GCGGAAACCCTTTCGTTGTGGGGCCGGATTTAAGGTACGACGAACGGCCG
CCGGCGCCGATGAAAGGGGACAGCAAAAGCGACGATCCGTTCGATGCGCC
GTTCTACCCCTTCACGGACGAGGGACCTCTGCTGAACGGTCGACCCCTCG
ACAAATGA
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