prot_P-littoralis_Contig113.9.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig113.9.2
Unique Nameprot_P-littoralis_Contig113.9.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length328
Homology
BLAST of mRNA_P-littoralis_Contig113.9.2 vs. uniprot
Match: D8LKD0_ECTSI (SsrA-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD0_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 2.040e-61
Identity = 98/111 (88.29%), Postives = 106/111 (95.50%), Query Frame = 0
Query:  140 NKKARRNYEILEKFEAGIELVGSEVKSCRMSKLNMDEGFAQAKNGQCLLHGVHIAECGASNRFYQHEPRRPRRLLLHKREIKKLEDKVAQKGMTVVPLKMFFNDDNRLPME 250
            ++KARRNYEILEKF AGIELVGSEVKSCRMSK+NMDEGFAQAK GQC LHG+HIAECG SNRFYQHEPRRPRRLLLHKREIKKLEDKVAQKGMTVVPLK+FF+D+NRL +E
Sbjct:    3 HRKARRNYEILEKFVAGIELVGSEVKSCRMSKINMDEGFAQAKKGQCFLHGIHIAECGVSNRFYQHEPRRPRRLLLHKREIKKLEDKVAQKGMTVVPLKIFFDDNNRLKVE 113          
BLAST of mRNA_P-littoralis_Contig113.9.2 vs. uniprot
Match: A0A835YRQ5_9STRA (Small protein B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRQ5_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.960e-39
Identity = 74/116 (63.79%), Postives = 90/116 (77.59%), Query Frame = 0
Query:  132 GPYKVIADNKKARRNYEILEKFEAGIELVGSEVKSCRMSKLNMDEGFAQAKNGQCLLHGVHIAECGASNRFYQHEPRRPRRLLLHKREIKKLEDKVAQKGMTVVPLKMFFNDDNRL 247
            GP+KVIA NK+A RNYEILE FEAGIEL+G+EVKS R  + ++DEG+A AK G+C+LHGVHIA    SN + QHE +RPRRLLLHKREIK+LED   + G T VPL ++FN  N L
Sbjct:   18 GPFKVIAKNKQAYRNYEILETFEAGIELLGTEVKSARGGRCSIDEGYAAAKRGECVLHGVHIAPYATSNAYDQHEAKRPRRLLLHKREIKRLEDMTTRAGYTAVPLTLYFNHKNLL 133          
BLAST of mRNA_P-littoralis_Contig113.9.2 vs. uniprot
Match: A0A7S3EVW1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EVW1_9EUKA)

HSP 1 Score: 140 bits (352), Expect = 8.070e-37
Identity = 65/118 (55.08%), Postives = 92/118 (77.97%), Query Frame = 0
Query:  133 PYKVIADNKKARRNYEILEKFEAGIELVGSEVKSCRMSKLNMDEGFAQAKNGQCLLHGVHIAECGASNRFYQHEPRRPRRLLLHKREIKKLEDKVAQKGMTVVPLKMFFNDDNRLPME 250
            P K +A N+ ARRNYEIL+ FEAGI L+G+EVKSCR +++ + +G+ + K+G+C L  VHIA+ G +  F+QHE  RPRRLLLHKREI+KLE +  Q+G+T+VPL+ +FN+ NR+ +E
Sbjct:   44 PSKQVAVNRLARRNYEILDDFEAGISLLGTEVKSCRANQMQLRDGYCRIKDGECWLMNVHIAKHGTTGAFFQHEETRPRRLLLHKREIRKLEKESEQRGLTIVPLRCYFNEQNRMKVE 161          
BLAST of mRNA_P-littoralis_Contig113.9.2 vs. uniprot
Match: A0A7S4FCI8_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FCI8_CHRCT)

HSP 1 Score: 136 bits (343), Expect = 1.090e-35
Identity = 66/122 (54.10%), Postives = 92/122 (75.41%), Query Frame = 0
Query:  129 KGKGPYKVIADNKKARRNYEILEKFEAGIELVGSEVKSCRMSKLNMDEGFAQAKNGQCLLHGVHIAECGASNRFYQHEPRRPRRLLLHKREIKKLEDKVAQKGMTVVPLKMFFNDDNRLPME 250
            KG G  + +  N++AR+NYE+LE++EAGI LVG+EVKSCR  K+N+ +G+ Q K+G+C L  VHIA    S  F+QH+  R RRLLL+KREI+KL+  V QKG+T+VP+K +FN DNRL ++
Sbjct:   28 KGTGVARDVTLNRQARQNYELLEEYEAGISLVGTEVKSCRAGKINLRDGYCQIKDGECWLRNVHIARHQFSGTFFQHDETRSRRLLLNKREIRKLDAAVQQKGLTIVPVKAYFNCDNRLKLQ 149          
BLAST of mRNA_P-littoralis_Contig113.9.2 vs. uniprot
Match: A0A845X7C8_9CYAN (SsrA-binding protein n=1 Tax=Spirulina sp. SIO3F2 TaxID=2607816 RepID=A0A845X7C8_9CYAN)

HSP 1 Score: 131 bits (330), Expect = 4.970e-34
Identity = 64/110 (58.18%), Postives = 84/110 (76.36%), Query Frame = 0
Query:  132 GPYKVIADNKKARRNYEILEKFEAGIELVGSEVKSCRMSKLNMDEGFAQAKNGQCLLHGVHIAECGASNRFYQHEPRRPRRLLLHKREIKKLEDKVAQKGMTVVPLKMFF 241
            G ++ I+DN+KAR  YEILE FEAG+ LVG+EVKS R  K+NM +GF Q +NG+  LH VHI+   AS  ++ HEPRR R+LLLHK+EI KL  K+ +KG+T+VPLKM+F
Sbjct:    7 GGFRTISDNRKARFRYEILETFEAGLVLVGTEVKSIRAGKVNMGDGFGQIRNGEAWLHNVHISPYQASGEYFNHEPRRIRKLLLHKKEITKLIGKLEEKGLTLVPLKMYF 116          
BLAST of mRNA_P-littoralis_Contig113.9.2 vs. uniprot
Match: A0A7S2S2L9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2L9_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.830e-33
Identity = 62/117 (52.99%), Postives = 86/117 (73.50%), Query Frame = 0
Query:  134 YKVIADNKKARRNYEILEKFEAGIELVGSEVKSCRMSKLNMDEGFAQAKNGQCLLHGVHIAECGASNRFYQHEPRRPRRLLLHKREIKKLEDKVAQKGMTVVPLKMFFNDDNRLPME 250
            Y+V + NK+ARRNYE LE+ EAGI LVG+EVK+ R  +++M +GFAQ K G+C L  VHI    +S  F+QHE RR R+LLLHK +I+K   +V  K +T+VP+K +FN+DNRL ++
Sbjct:    2 YRVFSVNKQARRNYEFLEELEAGISLVGTEVKAIRDGRIDMTDGFAQVKKGECWLKNVHIGPDKSSGPFFQHEARRERKLLLHKNQIRKFNQEVRMKQLTIVPVKAYFNEDNRLKIQ 118          
BLAST of mRNA_P-littoralis_Contig113.9.2 vs. uniprot
Match: A0A6H2NLS0_9CYAN (SsrA-binding protein n=1 Tax=Leptolyngbya sp. LCM1.Bin17 TaxID=2480211 RepID=A0A6H2NLS0_9CYAN)

HSP 1 Score: 130 bits (326), Expect = 1.940e-33
Identity = 62/107 (57.94%), Postives = 84/107 (78.50%), Query Frame = 0
Query:  134 YKVIADNKKARRNYEILEKFEAGIELVGSEVKSCRMSKLNMDEGFAQAKNGQCLLHGVHIAECGASNRFYQHEPRRPRRLLLHKREIKKLEDKVAQKGMTVVPLKMF 240
            YKVI+DN++AR  YEILE +EAGIEL+GSEVKS R  K+N+ +G+AQ KNG+  LH VH++    +N+ Y HE +R R+LLLH+ EI+KL  KV QKG+T+VPLK++
Sbjct:    8 YKVISDNRQARHQYEILETYEAGIELLGSEVKSIRQGKVNLRDGYAQIKNGELWLHNVHVSPHSMTNKVYNHEAKRTRKLLLHRDEIRKLIGKVEQKGLTLVPLKLY 114          
BLAST of mRNA_P-littoralis_Contig113.9.2 vs. uniprot
Match: A0A7S2S2R4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2R4_9STRA)

HSP 1 Score: 131 bits (329), Expect = 5.850e-33
Identity = 62/117 (52.99%), Postives = 87/117 (74.36%), Query Frame = 0
Query:  134 YKVIADNKKARRNYEILEKFEAGIELVGSEVKSCRMSKLNMDEGFAQAKNGQCLLHGVHIAECGASNRFYQHEPRRPRRLLLHKREIKKLEDKVAQKGMTVVPLKMFFNDDNRLPME 250
            Y+V++ NK+ARRNYE LE+ EAGI LVG+EVK+ R  +++M +GFAQ K G+C L  VHI    +S  F+QHE RR R+LLLHK +I+K   +V  K +T+VP+K +FN+DNRL ++
Sbjct:   80 YRVVSVNKQARRNYEFLEELEAGISLVGTEVKAIRDGRIDMTDGFAQVKKGECWLKNVHIGPDKSSGPFFQHEARRERKLLLHKNQIRKFNQEVRMKQLTIVPVKAYFNEDNRLKIQ 196          
BLAST of mRNA_P-littoralis_Contig113.9.2 vs. uniprot
Match: K9FEP1_9CYAN (SsrA-binding protein n=8 Tax=Leptolyngbyaceae TaxID=1890438 RepID=K9FEP1_9CYAN)

HSP 1 Score: 128 bits (321), Expect = 1.230e-32
Identity = 63/107 (58.88%), Postives = 84/107 (78.50%), Query Frame = 0
Query:  134 YKVIADNKKARRNYEILEKFEAGIELVGSEVKSCRMSKLNMDEGFAQAKNGQCLLHGVHIAECGASNRFYQHEPRRPRRLLLHKREIKKLEDKVAQKGMTVVPLKMF 240
            +KV+ADN++AR  YEIL+ +EAGIEL G+EVKS R  K+N+ +G+AQ KNG+  L  VHI+    +N+ Y HEPRRPRRLLLHK EI+KL  KV +KG+T+VPLK++
Sbjct:   14 FKVMADNRQARFTYEILDSYEAGIELKGTEVKSIRAGKVNLRDGYAQVKNGEVWLLNVHISPHDMTNQAYNHEPRRPRRLLLHKAEIRKLIGKVEEKGLTLVPLKLY 120          
BLAST of mRNA_P-littoralis_Contig113.9.2 vs. uniprot
Match: A0A7T5E3S4_9CYAN (SsrA-binding protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A7T5E3S4_9CYAN)

HSP 1 Score: 127 bits (319), Expect = 2.100e-32
Identity = 60/107 (56.07%), Postives = 84/107 (78.50%), Query Frame = 0
Query:  134 YKVIADNKKARRNYEILEKFEAGIELVGSEVKSCRMSKLNMDEGFAQAKNGQCLLHGVHIAECGASNRFYQHEPRRPRRLLLHKREIKKLEDKVAQKGMTVVPLKMF 240
            +K+++DN++AR  YEILE +EAGIEL+GSEVKS R  K+N+ +GFAQ K+G+  L  +HI+    +N+ Y HE +RPRRLL+H+ EI+KL  KV QKG+T+VPLKM+
Sbjct:    8 FKIVSDNRQARHEYEILETYEAGIELLGSEVKSIRQGKVNLRDGFAQLKDGELWLQNIHISPHTMTNKAYNHEAKRPRRLLMHRDEIRKLIGKVEQKGLTLVPLKMY 114          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig113.9.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKD0_ECTSI2.040e-6188.29SsrA-binding protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A835YRQ5_9STRA1.960e-3963.79Small protein B n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A7S3EVW1_9EUKA8.070e-3755.08Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S4FCI8_CHRCT1.090e-3554.10Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A845X7C8_9CYAN4.970e-3458.18SsrA-binding protein n=1 Tax=Spirulina sp. SIO3F2 ... [more]
A0A7S2S2L9_9STRA1.830e-3352.99Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6H2NLS0_9CYAN1.940e-3357.94SsrA-binding protein n=1 Tax=Leptolyngbya sp. LCM1... [more]
A0A7S2S2R4_9STRA5.850e-3352.99Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K9FEP1_9CYAN1.230e-3258.88SsrA-binding protein n=8 Tax=Leptolyngbyaceae TaxI... [more]
A0A7T5E3S4_9CYAN2.100e-3256.07SsrA-binding protein n=2 Tax=Cyanobacteria TaxID=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023620Small protein BGENE3D2.40.280.10coord: 130..253
e-value: 3.3E-39
score: 135.7
IPR023620Small protein BSUPERFAMILY74982Small protein B (SmpB)coord: 135..250
IPR000037SsrA-binding proteinTIGRFAMTIGR00086TIGR00086coord: 136..250
e-value: 1.4E-36
score: 123.7
IPR000037SsrA-binding proteinPFAMPF01668SmpBcoord: 137..245
e-value: 4.6E-39
score: 133.6
IPR000037SsrA-binding proteinPANTHERPTHR30308TMRNA-BINDING COMPONENT OF TRANS-TRANSLATION TAGGING COMPLEXcoord: 131..246
IPR000037SsrA-binding proteinHAMAPMF_00023SmpBcoord: 127..287
score: 38.745621
IPR000037SsrA-binding proteinCDDcd09294SmpBcoord: 140..243
e-value: 9.04317E-53
score: 167.527
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 290..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig113contigP-littoralis_Contig113:36900..53315 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig113.9.2mRNA_P-littoralis_Contig113.9.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig113 35326..53414 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig113.9.2 ID=prot_P-littoralis_Contig113.9.2|Name=mRNA_P-littoralis_Contig113.9.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=328bp
MRNISQLMWLSVAAAFSLFMSGAQGYSCVSGSLGSRSSSLAASATATTMN
LSRPYGEQQQQQQQQQQHHRYSISARREARSMGLGEGGWVVGKGVGWAWG
QTSAATFNQAPPLGMAAESGAPPAKKKRKGKGPYKVIADNKKARRNYEIL
EKFEAGIELVGSEVKSCRMSKLNMDEGFAQAKNGQCLLHGVHIAECGASN
RFYQHEPRRPRRLLLHKREIKKLEDKVAQKGMTVVPLKMFFNDDNRLPME
HLLRQALAAVMARSSPAGEFNAKEPSRFRTQPSRRKILGERRGREGGGCQ
QGRRFEHAHGSRKAVFEEGSGRRCRCP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023620SmpB
IPR000037SsrA-bd_prot