mRNA_P-littoralis_Contig5.99.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig5.99.1 vs. uniprot
Match: A0A6H5JY15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY15_9PHAE) HSP 1 Score: 570 bits (1469), Expect = 8.120e-193 Identity = 318/519 (61.27%), Postives = 364/519 (70.13%), Query Frame = 1
Query: 262 MAMGLKTKFLVALMLLINALLVINTRRARPELPRAP----------EIIPDCFDCLGGRDNHDRSPGGATVVPDDQ-DRNKKGNLPSPSSEGGVEGGAGGGLRASSQVPRADDPTAAAEAAVPGGPGAKTLPDEVRGGDVEQGRDGGSTVEAATGGGERGDGGEPDVLVVQVERPDNETEECKSMMKTLRIVPDESWGKATKAQQRQWATMGCDGVIARVVAEKAGGGGAAGSLGLPDCTARPSTTSDPLIAICAGSTTRGVRYPDEYSLALFRFLLPSIARTADCGFRYVAVIGYDIGDVFFDGAAGKAKTLSWFESKISRPAALRGLSIELELVGVDNRIKKPGPVFTAVTKAAYDLGASYFYRVNDDSEMHTPWARLFVDALEAMGPPYGVVGPESLNVNILVHDFTHRLHMDIFDKQYYPASLTDWFVDDWISRVYGNARTIRAKNCKVEHHTGAHGQRYKEDMTKAGSVNGLVEVGARKISAWAFDHGAEAAARQILSDKLDGKSASKAQARDI 1785
MAMG TKFL+ LMLL+NAL++IN RRA P+LPRA I PD G D ++ +T D + P A T A A +G GG + E G E GG LVVQ R + +TEECK M K+LRIVP++SWGKATK QQ+QW +GC+G+I E GG G L LPDCTARPS SDPLIA+CAGSTTRGV PDE+SLALFRFLLPS+ARTADCGFRY+AV+GYD+GD FFDGA GKAKTL+WFE++++RPAALRGLSIEL+LV V+N IKKPGPVFTAVTKAAYD GA+Y YRVNDDSEMHTPWAR FV+ALEAMGPPYGVVGPESLN NILVHDFTHRLHMDIF +QYYP SLTDW+VDDWISRVYGN+RTIRAKNC+VEHHTGAHGQRYK D +KA SV+GLV VGARKISAWA +GAE AAR+ILS+KLDGKSA+KA AR+I
Sbjct: 1 MAMGTPTKFLIGLMLLVNALVLINIRRASPDLPRAMGGVFRGQTQRRITPDA----GRGDPSQQTAAASTATATSAVDVARPXXXXXXXXXXXXXXXXXXXXXXXXXXPAAMGSTVAVGA---------------------EGMQGGDSRERI--GEENRPGG---XLVVQAARREKQTEECKGMAKSLRIVPNKSWGKATKPQQQQWDLLGCNGLI-----ETEARGGQGGGLKLPDCTARPSAKSDPLIAVCAGSTTRGVPSPDEHSLALFRFLLPSLARTADCGFRYLAVVGYDVGDGFFDGATGKAKTLAWFETEVARPAALRGLSIELDLVRVENAIKKPGPVFTAVTKAAYDRGANYIYRVNDDSEMHTPWARSFVNALEAMGPPYGVVGPESLNNNILVHDFTHRLHMDIFGQQYYPPSLTDWYVDDWISRVYGNSRTIRAKNCRVEHHTGAHGQRYKADTSKASSVDGLVLVGARKISAWASGNGAETAAREILSEKLDGKSATKAWAREI 484
BLAST of mRNA_P-littoralis_Contig5.99.1 vs. uniprot
Match: D8LIA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIA3_ECTSI) HSP 1 Score: 467 bits (1201), Expect = 1.990e-155 Identity = 226/277 (81.59%), Postives = 252/277 (90.97%), Query Frame = 1
Query: 955 PSTTSDPLIAICAGSTTRGVRYPDEYSLALFRFLLPSIARTADCGFRYVAVIGYDIGDVFFDGAAGKAKTLSWFESKISRPAALRGLSIELELVGVDNRIKKPGPVFTAVTKAAYDLGASYFYRVNDDSEMHTPWARLFVDALEAMGPPYGVVGPESLNVNILVHDFTHRLHMDIFDKQYYPASLTDWFVDDWISRVYGNARTIRAKNCKVEHHTGAHGQRYKEDMTKAGSVNGLVEVGARKISAWAFDHGAEAAARQILSDKLDGKSASKAQARDI 1785
PS TSDPLIA+CAGSTTRGV +PDE+SLALFRFLLPS+ARTADCGFRY+AV+GYD+GD FFDGAAGKAK ++RPAALRGLSIELELV V+N I+KPGPVFTAVTKAAYD GA+Y YRVNDDSEMHTPWAR FV+A+EAMGPPYGVVGPESLN NILVHDFTHRLHMDIFD+QYYP SLTDW+VDDWISRVYGN+RTIRAKNC+VEHHTGAHGQRY D +KA SV+GLV VGARKISAWA +GAEAAAR+ILS+KLDGKSA+KA+AR+I
Sbjct: 31 PSATSDPLIAVCAGSTTRGVPFPDEHSLALFRFLLPSLARTADCGFRYLAVVGYDVGDGFFDGAAGKAK--------VARPAALRGLSIELELVRVENAIQKPGPVFTAVTKAAYDRGANYIYRVNDDSEMHTPWARSFVNAIEAMGPPYGVVGPESLNKNILVHDFTHRLHMDIFDQQYYPPSLTDWYVDDWISRVYGNSRTIRAKNCRVEHHTGAHGQRYNADTSKASSVDGLVLVGARKISAWANGNGAEAAAREILSEKLDGKSATKARAREI 299
BLAST of mRNA_P-littoralis_Contig5.99.1 vs. uniprot
Match: A0A7S2WUR4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUR4_9STRA) HSP 1 Score: 295 bits (754), Expect = 1.920e-86 Identity = 156/339 (46.02%), Postives = 203/339 (59.88%), Query Frame = 1
Query: 772 CKSMMKTLRIVPDESWGKATKAQQRQWATMGCDGVIARVVAEKAGGGGAA--------GSLGLPDCTARPST-TSDPLIAICAGSTTRGVRYPDEYSLALFRFLLPSIARTADCGFRYVAVIGYDIGDVFFDGAAGKAKTLSWFESKISRPAALRGLSIELELVGVDNRIKKPGPVFTAVTKAAYDLGASYFYRVNDDSEMHTPWARLFVDALEAMGPPYGVVGP--ESLNVNILVHDFTHRLHMDIFDKQYYPASLTDWFVDDWISRVYGNARTIRAKNCKVEHHTGAHGQRYKEDMTKAGSVNGLVEVGARKISAWAFDHG-AEAAARQILSDKLDG 1752
C++ ++V +SWG +K +R+W CD V GGGG A GS P P+ PLIA+ GSTTR V P +LALF +LLPS+ARTADCGFRY+ VIG+D GD F+D +GK + +WFE + R L + L+LV + N +KKPGPVFT +T+AAY+ GA Y YRVNDD+E+ PWA LFV L +GPPYGVVGP N IL HDFTHR HM+IF+ YYP L DW++DDWISRVYG+ RT +AK+ +V HHT HGQRY+ D + + L+ G +I+ + G A + SD+ G
Sbjct: 167 CQAAATRHQVVVGQSWGSLSKDDRRRWTKRDCD----MFVRSSNGGGGRAPRKAGPAPGSAVKPREDVCPNDGDKKPLIAVACGSTTRKVMSPSTSNLALFTYLLPSLARTADCGFRYMVVIGFDKGDPFWDTLSGKLQAENWFEQNLVHVFNKRHLQVSLKLVRLVNHLKKPGPVFTEITRAAYNEGADYIYRVNDDTELLNPWASLFVSTLHRLGPPYGVVGPLCRQGNTKILTHDFTHRTHMEIFESDYYPPELVDWWMDDWISRVYGSHRTFQAKSAQVIHHTSHHGQRYQVDRSNKKHLERLITEGKNRIARYMGASGMAPLQVKSFASDRFTG 501
BLAST of mRNA_P-littoralis_Contig5.99.1 vs. uniprot
Match: A0A482STA7_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STA7_9ARCH) HSP 1 Score: 279 bits (714), Expect = 6.580e-83 Identity = 144/342 (42.11%), Postives = 203/342 (59.36%), Query Frame = 1
Query: 799 IVPDESWGKATKAQQRQWATMGCDGVIA-RVVAEKAGGGGAAGSLGLPDCTARPSTTSD-PLIAICAGSTTRGVRYPDEYSLALFRFLLPSIARTADCGFRYVAVIGYDIGDVFFDGAAGKAKTLSWFESKISRPAALRGLSIELELVGVDNRIKKPGPVFTAVTKAAYDLGASYFYRVNDDSEMHTPWARLFVDALEAMGPPYGVVGP--ESLNVNILVHDFTHRLHMDIFDKQYYPASLTDWFVDDWISRVYGNARTIRAKNCKVEHHTGAHGQRYKEDMTKAGSVNGLVEVGARKISAWAFDHGA-EAAARQILSDKLDGKSASKAQARDI*YVLRTSL 1809
+ P +SWG + +W CD V + +A K + +CTA D P+IA+ A STTR ++ P ++ALF +LLPS+ RT DCGFR+ +GYD GDV++D A+G + SW + + +P A R +S E + V N +KKPGPVF + +AAY GA+YFYR+NDD+E+ W + FV LE++G PYGVVGP N IL HDF HR+HMD+F+ YYP LTDW++DDWIS VYG RT +A++ V HHTGAHGQRY+ D + + LV +G +KI + HG + ++ D D A RDI + ++++L
Sbjct: 5 VQPMKSWGSMSPGVIEEWKKNRCDIVFTIQRMARKP----------VSNCTAYSGLGKDLPMIAVMAASTTRNIKEPSPTTMALFTYLLPSLMRTLDCGFRFEYYLGYDQGDVYYDDASGMQEATSWIDKNVKQPLANRKISFEFRPIRVHNTVKKPGPVFLEMARAAYKNGAAYFYRINDDTELLGTWPKAFVRTLESLGSPYGVVGPLCNQGNDKILTHDFVHRVHMDVFEMNYYPPELTDWWMDDWISFVYGQTRTFKARHVPVIHHTGAHGQRYQVDKSHEQLLGNLVRLGTQKIRQYMLKHGVNDTVLKKFDRDNFDLSFAH----RDIPFQIKSNL 332
BLAST of mRNA_P-littoralis_Contig5.99.1 vs. uniprot
Match: A0A7S2B2S3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B2S3_9STRA) HSP 1 Score: 277 bits (708), Expect = 1.850e-82 Identity = 138/269 (51.30%), Postives = 176/269 (65.43%), Query Frame = 1
Query: 973 PLIAICAGSTTRGVRYPDEYSLALFRFLLPSIARTADCGFRYVAVIGYDIGDVFFDGAAGKAKTLSWFESKISRPAALRGLSIELELVGVDNRIKKPGPVFTAVTKAAYDLGASYFYRVNDDSEMHTPWARLFVDALEAMGPP-YGVVGP--ESLNVNILVHDFTHRLHMDIFDKQYYPASLTDWFVDDWISRVYGNARTIRAKNCKVEHHTGAHGQRYKEDMTKAGSVNGLVEVGARKISAWAFDHGAEAA-ARQILSDKLDGKSASK 1767
PL+A+C G+TTR V P LALFR+LLPS+A T DCGF YVAV+GYD GD F+D GK + WF KI P + RGL++ L+LV DN++KKPGPVF +TK AYD+GA Y YRVNDD+EM PWA FV L +GPP G VGP + N IL HDFTHR HM+IF YYP L DW++DDWISRVYG+ RT + ++ V HHTGAHGQRY+ D + + L++ G KI A+ A+ + + +D+ +G K
Sbjct: 35 PLVAVCCGTTTRKVDQPAISKLALFRYLLPSMAHTLDCGFEYVAVVGYDKGDQFYDTLHGKLQVEQWFLDKIQGPLSERGLTVRLDLVQCDNKLKKPGPVFNIITKHAYDVGADYIYRVNDDTEMAAPWAHRFVTKLANLGPPNIGAVGPLCQQGNQKILTHDFTHRTHMEIFGGWYYPQELVDWWMDDWISRVYGSKRTRQGQSVPVVHHTGAHGQRYQVDKSNKKHLERLLKDGQNKIIAYMEKINADPGHVKSVKNDRFNGHPFEK 303
BLAST of mRNA_P-littoralis_Contig5.99.1 vs. uniprot
Match: A0A8J2WXY5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WXY5_9STRA) HSP 1 Score: 280 bits (716), Expect = 9.810e-81 Identity = 153/341 (44.87%), Postives = 208/341 (61.00%), Query Frame = 1
Query: 766 EECKSMMKTLRIVPDESWGKATKAQQRQWATMGCDGVI--ARVVAEKAGGGGAAGSLGLPDC-TARPSTTSDPLIAICAGSTTRGVR---YPDEYS-LALFRFLLPSIARTADCGFRYVAVIGYDIGDVFFDGAAGKAKTLSWFESKISRPAALRGLSIELELVGVDNRIKKPGPVFTAVTKAA-YDLGASYFYRVNDDSEMHTPWARLFVDALEAMGPPYGVVGP--ESLNVNILVHDFTHRLHMDIFDKQYYPASLTDWFVDDWISRVYGNARTIRAKNCKVEHHTGAHGQRYKEDMTKAGSVNGLVEVGARKISAWAFDHGAEAAARQILSDKLDGKS 1758
+EC MM+ ++P +WG QR+W + CDG++ +RV A + +P+ T PST + PLIA+C G+TTRG + P LA+F LLPS RT +CGFRYV V+GYDIGD ++D G + WF+ I A + + +EL VDN++KKPGPVFT +T+ A Y+ A Y YRVNDD+E+ T WA+ FV+AL +M G VGP + N IL HDFTHR HM+IF QYYP L+DW++DDWISRVYG RT+R + +V HHTG HGQRY+ D + A ++GL++ GA +I H AEA ++ + DG S
Sbjct: 168 DECAFMMQKHSVIPGANWGSLGPNGQRRWTKLRCDGLVGGSRVRAPPPR------HINVPELETCPPSTQNQPLIALCCGTTTRGKQGWITPQRLDDLAVFHHLLPSFHRTVECGFRYVVVLGYDIGDRWWDLGGGAEQGRRWFQENIKSQLAAKNVQVELRYAVVDNKVKKPGPVFTGITREAFYEAKADYIYRVNDDTELATRWAKHFVEALSSMNN-VGAVGPACQQGNRRILTHDFTHRTHMEIFGGQYYPPQLSDWWMDDWISRVYGPRRTLRGDSVEVIHHTGKHGQRYQVDRSHANLLHGLLQKGAAQIER----HLAEATTDNVVREPPDGFS 497
BLAST of mRNA_P-littoralis_Contig5.99.1 vs. uniprot
Match: A0A812R5F6_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812R5F6_SYMMI) HSP 1 Score: 271 bits (692), Expect = 4.750e-80 Identity = 136/260 (52.31%), Postives = 171/260 (65.77%), Query Frame = 1
Query: 943 CTARPSTTSD--PLIAICAGSTTRGVRYPDEYSLALFRFLLPSIARTADCGFRYVAVIGYDIGDVFFDGAAGKAKTLSWFESKISRPAALRGLSIELELVGVDNRIKKPGPVFTAVTKAAYDLGASYFYRVNDDSEMHTPWARLFVDALEAMGPPYGVVGPESLNV--NILVHDFTHRLHMDIFDKQYYPASLTDWFVDDWISRVYGNARTIRAKNCKVEHHTGAHGQRYKEDMTKAGSVNGLVEVGARKISAWAFDHGA 1710
CTA S+ PLIAI A +TTR V+ P +ALF LLPS+ R+ DCG+RYV V+GYD+GD F+D AG + +WF +I+ P G+SI L+ V V N +KKPGPVF A+ K AY+LGA+YFYRVNDD+E W +L+V AL M PP+GVVGP SL IL HDF HR+HM+IF++ YYP LTDW++DDWISRVYG RT+ AK V HHT AHGQRY+ D V ++ G I W +GA
Sbjct: 27 CTAAHLHDSEKYPLIAIMAATTTRRVKQPHVQKIALFTLLLPSLIRSLDCGYRYVYVMGYDVGDPFYDSEAGMQEVQAWFARQIAEPMRRNGISITLKPVKVFNPLKKPGPVFVAMAKPAYELGANYFYRVNDDTEFRGRWPKLYVKALLEMRPPFGVVGPSSLGSVDAILTHDFVHRVHMEIFEQDYYPPELTDWWMDDWISRVYGKKRTLIAKEVAVMHHTYAHGQRYEVDRGNQRLVPNALKKGRELIRQWMVKNGA 286
BLAST of mRNA_P-littoralis_Contig5.99.1 vs. uniprot
Match: F0YNX4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNX4_AURAN) HSP 1 Score: 272 bits (695), Expect = 1.300e-77 Identity = 153/340 (45.00%), Postives = 197/340 (57.94%), Query Frame = 1
Query: 724 DVLVVQVERPDNETEECKSMMKTLRIVPDESWGKATKAQQRQWATMGCDGVI--ARVVAEKAGGGGAAGSLGLPDC------TARPSTTSDPLIAICAGSTTRG-----VRYPDEYS-LALFRFLLPSIARTADCGFRYVAVIGYDIGDVFFDGAAGKAKTLSWFESKISRPAALRGLSIELELVGVDNRIKKPGPVFTAVTKAAY-DLGASYFYRVNDDSEMHTPWARLFVDALEAMGPPYGVVGP--ESLNVNILVHDFTHRLHMDIFDKQYYPASLTDWFVDDWISRVYGNARTIRAKNCKVEHHTGAHGQRYKEDMTKAGSVNGLVEVGARKISAW 1692
D + + P +EC++MM + P SWG QR+W ++ CDG++ A+ KA A S LP T ST PL+A+C G+TTRG PD LA+F LLPS RT DCGFRY V+GYD+GD F+D G +WF+ + A + EL VDN+IKKPGPVFTA+T+ AY + A Y YRVNDD+E+ T WA+ FV AL M G VGP + N IL HDFTHR HMDIF+ YYP L+DW++DDWIS VYG RT+R + +V HHTG HGQRY D + AG + GL+ G++KI A+
Sbjct: 178 DAAAPKADGPLGPRDECRAMMAKHSVAPGSSWGSLGPNGQRRWGSLRCDGLVKGAKNTPSKAAADRARKST-LPSSRQVTLETCPKSTEPLPLVAVCCGTTTRGKGGWITPRPDALEELAVFDHLLPSFVRTVDCGFRYAVVLGYDVGDKFWDLGDGATLARAWFDENVKSVLAAANVEAELRFAVVDNKIKKPGPVFTAITRHAYYEAKADYIYRVNDDTELATRWAKHFVAALATMDN-VGAVGPMCKQGNRKILTHDFTHRKHMDIFEGTYYPPELSDWWMDDWISGVYGADRTLRGEVVEVVHHTGKHGQRYGVDKSHAGLLKGLLAGGSKKIQAY 515
BLAST of mRNA_P-littoralis_Contig5.99.1 vs. uniprot
Match: A0A812V9C2_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V9C2_SYMMI) HSP 1 Score: 265 bits (678), Expect = 1.610e-76 Identity = 129/312 (41.35%), Postives = 184/312 (58.97%), Query Frame = 1
Query: 772 CKSMMKTLRIVPDESWGKATKAQQRQWATMGCDGVIARVVAEKAGGGGAAGSLGLPDCTARPSTTSDP---LIAICAGSTTRGVRYPDEYSLALFRFLLPSIARTADCGFRYVAVIGYDIGDVFFDGAAGKAKTLSWFESKISRPAALRGLSIELELVGVDNRIKKPGPVFTAVTKAAYDLGASYFYRVNDDSEMHTPWARLFVDALEAMGPPYGVVGPESLNVN--ILVHDFTHRLHMDIFDKQYYPASLTDWFVDDWISRVYGNARTIRAKNCKVEHHTGAHGQRYKEDMTKAGSVNGLVEVGARKISAW 1692
C+ + +VP+ +WG T Q +W C+ + A K P + T++P LIAI A +TTR + P L+LF+ L S+ + D GF+Y+ V+GYD+GD F+D AG +KT +WF+ ++ P + + I+L V VDN+++KPGPVF + + AYD GA + YRVNDD+E W RL+ +AL ++GPPYG VGP S+ N IL HDF HR+HM++FD +YYP L DW++DDWI+ VYG RT +K V HHT HGQRYK D + + S+ L++ G I W
Sbjct: 81 CRYHKRMFGVVPEVAWGNLTLRDQAKWIEYDCNELFATKRVSKP-------IAACPTENYNDTVTTNPKLPLIAIMAATTTRNIYEPSVKVLSLFQLLFASLRLSLDWGFQYMFVLGYDVGDKFYDSKAGLSKTKTWFDDNVAVPLKEKNIFIKLRTVRVDNKLRKPGPVFLEIARFAYDKGAQFLYRVNDDTEFRGRWPRLYANALLSLGPPYGAVGPHSIGSNNRILTHDFVHRMHMEVFDMKYYPVELPDWWMDDWITHVYGPLRTFHSKKVGVYHHTNVHGQRYKVDQSNSKSLLKLIKKGRLTIRHW 385
BLAST of mRNA_P-littoralis_Contig5.99.1 vs. uniprot
Match: A0A7S3Y7G8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7G8_HETAK) HSP 1 Score: 259 bits (663), Expect = 3.630e-75 Identity = 148/343 (43.15%), Postives = 198/343 (57.73%), Query Frame = 1
Query: 766 EECKSMMKTLRI-VPDESW-GKATKAQQRQWATMGCDGVIARVVAE---KAGGGGAAGSLGLPDCTARPSTTSDPLIAICAGSTTRG--VRYPDEYSLALFRFLLPSIARTADCGFRYVAVIGYDIGDVFFDGAAGKAKTLSWFESKISRPAALRGLSIELELVGVDNRIKKPGPVFTAVTKAAYDLGASYFYRVNDDSEMHTPWARLFVDALEAMGPPYGVVGPE--SLNVNILVHDFTHRLHMDIFDKQYYPASLTDWFVDDWISRVYGNARTIRAKNC-KVEHHTGAHGQRYKEDMTKAGSVNGLVEVGARKISAWAFDHG--AEAAARQILSDKLDGKS 1758
++C+ + + R+ V + W G K ++W M C +A A AAG G + P+ P +A+ +TTR V LALF LLPS+ + A+CGF Y V+ YD GD FFD G+ +T WF+ P +G+ IEL VDN++KKPGP FTA+TK AYD G+ Y YRVNDD++ P+A L AL+AMGPPYGVVGP + IL HDFTHR HM+IF++ YYP L+DW++DDW+SRVYG RT A + KV HHTG HG RY+ DM+ + GLV+ G +KI +A G + A +Q+ D L GKS
Sbjct: 21 DKCRRIERGHRLDVNQQGWEGTLPKGTLKEWRQMHCIDRLAEAQIHGRPTADCRDAAGHQGWEGGSGAPAL---PWVAVAVSATTRNLDVGVLGLGGLALFSILLPSLVQAAECGFNYRVVLAYDYGDKFFDSKKGQQQTKEWFKQNAMIPLEDKGIKIELLFAPVDNKVKKPGPAFTAMTKVAYDAGSEYIYRVNDDTQFMEPFAALMSRALQAMGPPYGVVGPRCHGQSTRILTHDFTHRTHMEIFNQFYYPPQLSDWWMDDWVSRVYGRERTAMASSGGKVFHHTGKHGSRYQVDMSHKKFLEGLVKEGHKKIVGYAEQKGLLSGKALQQLRDDSLSGKS 360 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig5.99.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig5.99.1 >prot_P-littoralis_Contig5.99.1 ID=prot_P-littoralis_Contig5.99.1|Name=mRNA_P-littoralis_Contig5.99.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=509bp MAMGLKTKFLVALMLLINALLVINTRRARPELPRAPEIIPDCFDCLGGRDback to top mRNA from alignment at P-littoralis_Contig5:458576..471532+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig5.99.1 ID=mRNA_P-littoralis_Contig5.99.1|Name=mRNA_P-littoralis_Contig5.99.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=12957bp|location=Sequence derived from alignment at P-littoralis_Contig5:458576..471532+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig5:458576..471532+ >mRNA_P-littoralis_Contig5.99.1 ID=mRNA_P-littoralis_Contig5.99.1|Name=mRNA_P-littoralis_Contig5.99.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1527bp|location=Sequence derived from alignment at P-littoralis_Contig5:458576..471532+ (Pylaiella littoralis U1_48)back to top |