prot_P-littoralis_Contig113.96.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig113.96.1
Unique Nameprot_P-littoralis_Contig113.96.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length546
Homology
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BLAST of mRNA_P-littoralis_Contig113.96.1 vs. uniprot
Match: D8LMB1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB1_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 1.870e-5
Identity = 22/39 (56.41%), Postives = 28/39 (71.79%), Query Frame = 0 
Query:    1 MVNVINKRCTHHGCTKWPSYGVAGTKTTELCSGHAKDGM 39
            MV+V+N+RC H GCTK PS+G  G+K  E C+ HA  GM
Sbjct:    1 MVDVVNRRCRHPGCTKRPSFGQDGSKKQEFCAQHAHQGM 39
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig113.96.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMB1_ECTSI1.870e-556.41EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.140.110coord: 139..178
e-value: 4.8E-7
score: 31.9
coord: 62..124
e-value: 2.1E-12
score: 49.2
coord: 291..330
e-value: 4.1E-5
score: 25.8
coord: 331..387
e-value: 7.5E-8
score: 34.5
coord: 217..276
e-value: 7.5E-13
score: 50.5
coord: 179..216
e-value: 1.4E-6
score: 30.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 403..422
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 383..433
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 492..545
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 47..80
e-value: 3.7E-8
score: 33.8
coord: 9..42
e-value: 1.3E-9
score: 38.5
coord: 161..194
e-value: 2.4E-9
score: 37.5
coord: 313..347
e-value: 0.014
score: 16.0
coord: 351..383
e-value: 3.6E-6
score: 27.5
coord: 85..118
e-value: 7.5E-6
score: 26.4
coord: 123..157
e-value: 0.0016
score: 19.0
coord: 237..270
e-value: 9.9E-9
score: 35.6
coord: 199..232
e-value: 7.3E-9
score: 36.0
coord: 275..309
e-value: 7.9E-8
score: 32.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig113contigP-littoralis_Contig113:395684..397960 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig113.96.1mRNA_P-littoralis_Contig113.96.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig113 395597..399458 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig113.96.1 ID=prot_P-littoralis_Contig113.96.1|Name=mRNA_P-littoralis_Contig113.96.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=546bp
MVNVINKRCTHHGCTKWPSYGVAGTKTTELCSGHAKDGMVNVINKRCTHR
CCTKLPSYGVAGTKTAEFCSDHAKDGMVNVISKRCKHHGCAKLPSYGVGG
TKTAEFCSGHAKDGMVEVKNKKCTHRGCAKQASSSAAGAKKVEFCSVHAK
DGMVDVKHKRCNRHGCTKLPSYGVAGTKMREFCSEHAKDGMVNVISKRCI
HRGCTKLPSYGVAGTKMREFCSEHAKDGMVNVISKRCIHRGCTKLPSYGA
GGTKTPEFCSGHAKDGMVNVISKRCKHRGCAKRPSYGAGGTKTPEFCSGH
AKDGMVDVKNKRCTHRGCTKQASSSAAGAKKVEFCSVHAKDGIVDVVDKR
CAQPGCTTSPGFGVTGGIRTFCARHAGEGMADLSSPKNLAGAHSGHSGGV
RGHGEVAVEEDTSQRAGAGGKRRDRPPSSIQMGTFTCRSKRTRQVPVHTH
VTPTPLEAAGNGAHTPVGCGSFLETVKAAVKVEVAAPSKSDPARSSPCEA
EAWVDSAENDSCGEPDGAMKTEVGMSFPPKGAAAVGELNSRRGKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys