mRNA_P-littoralis_Contig1.438.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1.438.3
Unique NamemRNA_P-littoralis_Contig1.438.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig1.438.3 vs. uniprot
Match: A0A6H5K1V2_9PHAE (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V2_9PHAE)

HSP 1 Score: 451 bits (1161), Expect = 1.880e-153
Identity = 276/441 (62.59%), Postives = 314/441 (71.20%), Query Frame = 3 
Query:   69 MAEFGAKLCSNPGCRQHDFLPFTCSACGRVFCQEHMAIGSGHVCDPGEAYLASRRGDGERVTSTSPTXXXXXXXXXXLQKKPSEMMSAVASRFDGREDELNATVTHVHVKSSKGKAADGNAGAPDKVLKNAQLAMDKATTAKGRRVSAQVRRMLLKSKAAGDNRLRAEDRFFLEVHYSGNDTDVHHLFFSRLWTVGRTLDDILKTRRRHLRLEPGEEDRPLELAREDSPSGLPTGGILHDFPPELLQSFDVVEVRPRVHSPADSYSVPGTAAGASGSSSSPPVMTVAAAGIEEVDGRGAERTGLGVASEEAASATRTAATN-------------------ACGGDRXXXXXXXXXXXXXXXXXXXXXREGMTITIGHGKLIYELDGVVPDQVSVLDIKRRLESITGVPFLRQKLLFKGVLRDGDKISATKIQEGAKVMLLG 1334
            MAEFGAKLCS PGCRQHDFLP+ C+AC +VFC +HMAIGSGH CD GE YLASR G G R+ +                 KPSE+MSAV SRFDGRE ELNA  TH ++K+S+G+A +G+AGAPDK+L+N+QLAMDKA T KG+RVS QV RMLLK+KA GD +LR EDRFFLEVHY GNDTDVHHLFFSRLWTVGR LDDILKTRRRHLRL+ GEE RPLELAR  + SGLPTGGI  + PPE LQ FD V VRPR    A S +   +A G S  S      TVAA G+  V+    +  G G+  +E  S  +   T                    A  G    XXXXXXXXXXXXXXXXXXX  GMTIT+ HGK +YEL GV+PD++SVLD+KRRLE ITGVPFLRQKLLFKG+LRDGDKI ATKI EGAKVMLLG
Sbjct:    1 MAEFGAKLCSYPGCRQHDFLPYACAACRQVFCSDHMAIGSGHRCDHGEEYLASRNGKGGRIAAPG--------SHRLSLSKPSEVMSAVTSRFDGREKELNAVTTHFNIKASEGEAGEGSAGAPDKLLRNSQLAMDKAATEKGKRVSTQVHRMLLKAKAVGDKKLRMEDRFFLEVHYCGNDTDVHHLFFSRLWTVGRALDDILKTRRRHLRLKAGEEARPLELARVGASSGLPTGGIFTNLPPEQLQLFDAVMVRPRTLPRAGSSASDISAEGGSSDS------TVAAPGLN-VESAPDDLKGSGIGGDEEPSEQQQRQTGHVLSTCAVGAKSSGFEEAVAGSGVTSAXXXXXXXXXXXXXXXXXXXXXGMTITVCHGKSVYELGGVMPDRMSVLDLKRRLEPITGVPFLRQKLLFKGILRDGDKIGATKIVEGAKVMLLG 426
[Close]
BLAST of mRNA_P-littoralis_Contig1.438.3 vs. uniprot
Match: D8LBN6_ECTSI (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBN6_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 3.900e-97
Identity = 202/332 (60.84%), Postives = 233/332 (70.18%), Query Frame = 3 
Query:  396 KSSKGKAADGNAGAPDKVLKNAQLAMDKATTAKGRRVSAQVRRMLLKSKAAGDNRLRAEDRFFLEVHYSGNDTDVHHLFFSRLWTVGRTLDDILKTRRRHLRLEPGEEDRPLELAREDSPSGLPTGGILHDFPPELLQSFDVVEVRPRVHSPADSYSVPGTAAGASGSSSSPPVMTVAAAGIEEVDGRGAERTGLGVASEEAAS-----------ATRTAATNACG--------GDRXXXXXXXXXXXXXXXXXXXXXREGMTITIGHGKLIYELDGVVPDQVSVLDIKRRLESITGVPFLRQKLLFKGVLRDGDKISATKIQEGAKVMLLG 1334
            +S+ G  A        ++LKN+QLAMDKA T KG+R+S QV RMLLK+KA GD +LR EDRFFLEVHY GNDTDVHHLFFSRLWTVGR LD ILKTRRRH+RL+ GEE RPLELAR  + SGLPTGGIL++ PPE LQSFD V VRPR   PA S +   +A G S  S+      VAA G+  V+G   +  G G+  +E  +           +T      A G        G  XXXXXXXXXXXXXX   XXXX  GMTIT+GHGK +YEL GV+PD++SVLD+KRRLE ITGVPFLRQKLLFKG+LRDGDKI ATKI EGAKVMLLG
Sbjct:   16 RSAAGIDATKETSTSRRLLKNSQLAMDKAATEKGKRMSTQVHRMLLKAKAVGDKKLRMEDRFFLEVHYCGNDTDVHHLFFSRLWTVGRALDHILKTRRRHMRLKAGEEARPLELARVGASSGLPTGGILNNLPPEQLQSFDAVMVRPRTLPPAGSSASDTSAQGGSSDSA------VAAPGLN-VEGAPDDLKGSGIGGDEEPNKQQQRQTGHVLSTCAVGAKASGCEEAGEGSGXXXXXXXXXXXXXXXXASEXXXXXXGMTITVGHGKSVYELGGVMPDRMSVLDLKRRLEPITGVPFLRQKLLFKGILRDGDKIGATKIVEGAKVMLLG 340
[Close]
BLAST of mRNA_P-littoralis_Contig1.438.3 vs. uniprot
Match: A0A4D9CUT0_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUT0_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 7.030e-13
Identity = 75/238 (31.51%), Postives = 104/238 (43.70%), Query Frame = 3 
Query:   72 AEFGAKLCSNPGCRQHDFLPFTCSACGRVFCQEHMAIGSGHVCDPGEAYLASRRGDGERVTSTSPTXXXXXXXXXXLQKKPSEMMSAVASRFDGREDELNATVTHVHVKSSKGKAADGNAGAPDKVLKN-AQLAMDKATTAKGRRVSAQVRRMLLKSKAAGDNRLRAEDRFFLEVHYSGNDTD---------------------------VHHLFFSRLWTVGRTLDDILKTRRRHLR 701
            A +G K      C ++DFLP  C+ C  + C +HMA  + H C   E   +  R                      L +  +E M  V  RFDG  +   AT  H  V+ S+      +  A +K LK   + A    T  KG +   +VR+MLLKSKA G + L A+DRF+LEV   G D +                           V +LFFSRLW++GR LD+ ++  RR LR
Sbjct:    3 AHYGDKCAL---CGRNDFLPHRCTLCSLLHCTDHMAPFA-HECAGREDNTSKDR-----------------PQAFGLGRALAEEMDRVRRRFDGASEW--ATKEHFRVQGSQAGLV-ASFRAENKYLKAYREQAKAGKTRHKGHKTREKVRQMLLKSKAQGRSSLHADDRFYLEVRIGGLDVEEKGTASPSSLPPSAPASTPSVASSAEVVDYLFFSRLWSLGRVLDETIEKHRRALR 216
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BLAST of mRNA_P-littoralis_Contig1.438.3 vs. uniprot
Match: UPI00148AD783 (AN1-type zinc finger protein 1 isoform X2 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148AD783)

HSP 1 Score: 68.2 bits (165), Expect = 3.610e-9
Identity = 63/212 (29.72%), Postives = 94/212 (44.34%), Query Frame = 3 
Query:   69 MAEFG--AKLCSNPGCRQHDFLPFTCSACGRVFCQEHMAIGSGHVCDPGEAYLASRRGDGERVTSTSPTXXXXXXXXXXLQKKPSEMMSAVASRFD-----GREDELNATVTHVHVKSSKGKAADGNAGAPDKVLKNAQLAMD--KATTAKGRRVSAQVRRMLLKSKAAGDNRLRAEDRFFLEVHYSGNDTD---VHHLFFSRLWTVGRTLD 668
            MAEF    + CS  GC+Q DFLPFTC+ C +VFC EH      H C   ++        G R  S S T           + K  E+M  V  +       G   + +     +  K +  K A+       ++L + +L ++  K    K  + +A+V  M +K  A GD ++   DR +L+V   G          LFFS+ W+VGRT+D
Sbjct:    1 MAEFPNLGEHCSLDGCKQIDFLPFTCTKCQKVFCLEHK-FPDDHSCTEFKSDTPHVEYTGTRAYSCSFT-----------ECKARELMPVVCEKCSKNFCLGHRHQKDHNCEKLVEKITPTKTAEH----VQQILASKKLNINPKKPRGKKSSKTAAKVALMKMKLHAVGDAKIPDFDRVYLQVVLPGGSVSKGPTKQLFFSKTWSVGRTID 196
[Close]
BLAST of mRNA_P-littoralis_Contig1.438.3 vs. uniprot
Match: A0A8B8ESK0_CRAVI (AN1-type zinc finger protein 1-like isoform X2 n=3 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8ESK0_CRAVI)

HSP 1 Score: 64.7 bits (156), Expect = 5.250e-8
Identity = 59/214 (27.57%), Postives = 89/214 (41.59%), Query Frame = 3 
Query:   69 MAEFG--AKLCSNPGCRQHDFLPFTCSACGRVFCQEHMAIGSGHVC-----DPGEAYLASRRGDGERVTSTSPTXXXXXXXXXXLQKKPSEMMSAVASRFDGREDELNATVTHVHVKSSKGKAADGNAGAPDKVLKNAQLAMD--KATTAKGRRVSAQVRRMLLKSKAAGDNRLRAEDRFFLEVHYSGNDTD---VHHLFFSRLWTVGRTLDDI 674
            MAEF    K CS  GC+Q DFLPFTC++C +VFC +H      H C     D         +G     T  S            L+            + +  E+++  T T  HV+                +L + +L ++  K    K  + +A+V  M +K  A GD ++   DR +L+V   G          LFFS+ W+VGR +D +
Sbjct:    1 MAEFLNLGKHCSLDGCKQIDFLPFTCTSCQKVFCLDHK-FPDDHSCTEFASDSPHVEYTGTKGYSCSFTECSARELMPVVCDKCLKNFCLRHRHQNDHKCEKLEEKITPTKTAEHVQQ---------------ILASKKLDVNPKKPRGKKSSKTAAKVALMKMKLHAVGDTKIPDFDRVYLQVVLPGGTVSKGTTKPLFFSKTWSVGRVIDAV 198
[Close]
BLAST of mRNA_P-littoralis_Contig1.438.3 vs. uniprot
Match: A0A7S2RYK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYK3_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 6.170e-8
Identity = 41/125 (32.80%), Postives = 65/125 (52.00%), Query Frame = 3 
Query:  480 ATTAKGRRVSAQVRRMLLKSKAAGDNRLRAEDRFFLEVHYSG---NDTDVHHLFFSRLWTVGRTLDDILKTRRRHL---RLEPGEEDRPLELAREDSPSGLPTGGILHDFPPELLQSFDVVEVRP 836
            ++++ G+++S QVRRM++K +A G + L  ++RF LEV       ++  V++LFF R WT+G  LDD+ +  +       +  G     L L R            L D  P++LQ FDVV   P
Sbjct:   23 SSSSSGKKISGQVRRMVIKQQAIGRSNLAPDERFHLEVQIKDTQESECSVYYLFFPRNWTLGHALDDMCRQFQSAAWQDLIPTGPAGHHLALHRSTP---------LRDLSPDILQQFDVVTFAP 138
[Close]
BLAST of mRNA_P-littoralis_Contig1.438.3 vs. uniprot
Match: A0A7M7N6K5_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7N6K5_STRPU)

HSP 1 Score: 61.6 bits (148), Expect = 6.310e-7
Identity = 64/220 (29.09%), Postives = 90/220 (40.91%), Query Frame = 3 
Query:   69 MAEFG-AKLCSNPGCRQHDFLPFTCSACGRVFCQEHMAIGSGHVCDPGEAYLASRRGDGERVTSTSPTXXXXXXXXXXLQKKPSEMMSAVASRFDGREDELNATVTHVHVKSSKGKA--ADGNAGAPDKVLKNAQLAMD----KATTAKGRRVSAQVRR----------MLLKSKAAGDNRLRAEDRFFLEVHYSGNDTDVHH-LFFSRLWTVGRTLDDI 674
            MAE    K CS   C + DFLPF C+ C  VFC EH +   GH C    +     + +GE V     T             K +E++              N  + H H    +      DG A AP  + K AQL  D    K TT  G +                 M +K  A GD+ +  ++R F +VH     ++ H  +FFS +W+VG+T+D I
Sbjct:    1 MAELDIGKHCSINSCNRLDFLPFVCTGCAGVFCLEHKSK-DGHNCSEAHSIANPVKENGEYVAPVIYTCALTGC-------KRTEVVPVTCEHCH-----KNFCLGHRHQTDHQCTELPTDGKA-AP--MAKTAQLVQDIKDSKKTTGTGVKXXXXXXXXXXXXXXXXXMKMKMHALGDSSIPQKERVFFQVHLPKGHSESHKPMFFSNMWSVGKTVDRI 204
[Close]
BLAST of mRNA_P-littoralis_Contig1.438.3 vs. uniprot
Match: A0A8H7PMB8_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PMB8_MORIS)

HSP 1 Score: 60.5 bits (145), Expect = 2.000e-6
Identity = 27/74 (36.49%), Postives = 51/74 (68.92%), Query Frame = 3 
Query: 1116 EGMTITIGHGKLIYELDGVVPDQVSVLDIKRRLESITGVPFLRQKLLFKGVLRDGDKISATKIQEGAKVMLLGA 1337
            + +++ I     +YEL+     Q ++LD+K+ L+ +TGVP  RQKL+FKG++++   +S  K+ +G+K+ML+G+
Sbjct:    4 DNLSLQISFKGALYELNDR-DSQSTILDLKQHLQDLTGVPVERQKLMFKGLMKNEQTLSEAKVSQGSKIMLIGS 76
[Close]
BLAST of mRNA_P-littoralis_Contig1.438.3 vs. uniprot
Match: A0A6U9ILE4_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A6U9ILE4_9DINO)

HSP 1 Score: 57.4 bits (137), Expect = 3.850e-6
Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 3 
Query:   93 CSNPGCRQHDFLPFTCSACGRVFCQEHMAIGSGHVCDPGEAYLASR 230
            CS+P CRQ DFLPFTC+AC +VFC++H    S H C+ G A    R
Sbjct:   11 CSDPYCRQQDFLPFTCNACNKVFCKDHFKY-SAHSCEKGLAATDKR 55
[Close]
BLAST of mRNA_P-littoralis_Contig1.438.3 vs. uniprot
Match: A0A7S3UX29_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX29_HETAK)

HSP 1 Score: 58.9 bits (141), Expect = 4.720e-6
Identity = 71/279 (25.45%), Postives = 120/279 (43.01%), Query Frame = 3 
Query:  525 MLLKSKAAGDNRLRAEDRFFLEVHYSGNDTD-VHHLFFSRLWTVGRTLDDILKTRRRHLRLEPGEEDRPLELAREDSPSGLPTGGILHDFPPELLQSFDVVEVRPRVHSPADSYSVPGTAAGASGSSSSPPVMTVA----AAGIEEVD-----GRGAERTGLGVASEEAASATRTAATNACGGDRXXXXXXXXXXXXXXXXXXXXXREGMTITIGHGKLIYELDGVVPDQVSVLDIKRRLESITGVPFLRQKLLFKGVLRDGDKISATKIQEGAKVMLL 1331
            M +KSK+AG   +  +++FF+ V     D +   H++F RLWTVGR +D ++       R       + LEL  E   S +    I+H      L+ FD V     + S A ++ +    +   G        + A    A    ++D       G E+T L     +        ++++ G                            T  +  GK +Y +  +  +  +VLD+K +LE +TG+P  +QKLL+KG+L+D   I  T ++ GAKV+L+
Sbjct:    1 MKIKSKSAGPAGVLNDNKFFVLVQLKTPDINWERHMYFPRLWTVGRAIDYVISFLSEEYRR--AILGKALELYCERINSIVSKDTIIHG---SKLEEFDTV-----ILSFAGAFDLLLDGSCLDGEPDEKKQTSYAEHEGATRQSKMDKSIKADNGGEQTILASRDAKLNDEKCLISSSSGGPLSLQMNADSLIPPSSPAHESNPGTSSFTFYVKVGKEMYSVADLDENANTVLDLKVKLEQLTGIPVQQQKLLYKGILQDSQVICGTAVKAGAKVILM 269
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.438.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5K1V2_9PHAE1.880e-15362.59Ubiquitin-like domain-containing protein n=1 Tax=E... [more]
D8LBN6_ECTSI3.900e-9760.84Ubiquitin-like domain-containing protein n=1 Tax=E... [more]
A0A4D9CUT0_9STRA7.030e-1331.51Ubiquitin-like domain-containing protein n=1 Tax=N... [more]
UPI00148AD7833.610e-929.72AN1-type zinc finger protein 1 isoform X2 n=2 Tax=... [more]
A0A8B8ESK0_CRAVI5.250e-827.57AN1-type zinc finger protein 1-like isoform X2 n=3... [more]
A0A7S2RYK3_9STRA6.170e-832.80Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7M7N6K5_STRPU6.310e-729.09Uncharacterized protein n=1 Tax=Strongylocentrotus... [more]
A0A8H7PMB8_MORIS2.000e-636.49Uncharacterized protein n=1 Tax=Mortierella isabel... [more]
A0A6U9ILE4_9DINO3.850e-654.35Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
A0A7S3UX29_HETAK4.720e-625.45Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:1886605..1891720 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog7029.ACYPI002778-PA
Preferred nameZFAND1
PFAMsApc13p,zf-AN1
Model size1376
Max annot lvl33208|Metazoa
KEGG koko:K07059,ko:K12456
KEGG Pathwayko04110,ko04114,ko04120,ko04914,map04110,map04114,map04120,map04914
KEGG ModuleM00389
Hectar predicted targeting categoryother localisation
Exons6
Evalue5.09e-13
EggNOG OGsKOG3183@1|root,KOG3183@2759|Eukaryota,39R5H@33154|Opisthokonta,3BC8X@33208|Metazoa,3CR5C@33213|Bilateria,41Z4V@6656|Arthropoda,3SM5R@50557|Insecta,3EAVU@33342|Paraneoptera
Ec32 ortholog descriptionAN1-type zinc finger and ubiquitin-like protein
Ec32 orthologEc-27_003310.1
DescriptionAN1-like Zinc finger
Cds size1308
COG categoryS
BRITEko00000,ko00001,ko00002,ko03036,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.438.3prot_P-littoralis_Contig1.438.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1 1886673..1891720 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789325.2637773-UTR-P-littoralis_Contig1:1886604..18866721680789325.2637773-UTR-P-littoralis_Contig1:1886604..1886672Pylaiella littoralis U1_48UTRP-littoralis_Contig1 1886605..1886672 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789325.2755833-CDS-P-littoralis_Contig1:1886672..18868311680789325.2755833-CDS-P-littoralis_Contig1:1886672..1886831Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1886673..1886831 +
1680789325.2857227-CDS-P-littoralis_Contig1:1887481..18876991680789325.2857227-CDS-P-littoralis_Contig1:1887481..1887699Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1887482..1887699 +
1680789325.2954037-CDS-P-littoralis_Contig1:1888203..18883591680789325.2954037-CDS-P-littoralis_Contig1:1888203..1888359Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1888204..1888359 +
1680789325.3039837-CDS-P-littoralis_Contig1:1889081..18892511680789325.3039837-CDS-P-littoralis_Contig1:1889081..1889251Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1889082..1889251 +
1680789325.3126023-CDS-P-littoralis_Contig1:1889805..18901671680789325.3126023-CDS-P-littoralis_Contig1:1889805..1890167Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1889806..1890167 +
1680789325.3237622-CDS-P-littoralis_Contig1:1891477..18917201680789325.3237622-CDS-P-littoralis_Contig1:1891477..1891720Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1891478..1891720 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1.438.3

>prot_P-littoralis_Contig1.438.3 ID=prot_P-littoralis_Contig1.438.3|Name=mRNA_P-littoralis_Contig1.438.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=436bp
MAEFGAKLCSNPGCRQHDFLPFTCSACGRVFCQEHMAIGSGHVCDPGEAY
LASRRGDGERVTSTSPTTTTAEAAAAALQKKPSEMMSAVASRFDGREDEL
NATVTHVHVKSSKGKAADGNAGAPDKVLKNAQLAMDKATTAKGRRVSAQV
RRMLLKSKAAGDNRLRAEDRFFLEVHYSGNDTDVHHLFFSRLWTVGRTLD
DILKTRRRHLRLEPGEEDRPLELAREDSPSGLPTGGILHDFPPELLQSFD
VVEVRPRVHSPADSYSVPGTAAGASGSSSSPPVMTVAAAGIEEVDGRGAE
RTGLGVASEEAASATRTAATNACGGDRGGGRGGRGGGGGGGGGGGGGGRE
GMTITIGHGKLIYELDGVVPDQVSVLDIKRRLESITGVPFLRQKLLFKGV
LRDGDKISATKIQEGAKVMLLGAAAAAAAATAAKK*
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mRNA from alignment at P-littoralis_Contig1:1886605..1891720+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1.438.3 ID=mRNA_P-littoralis_Contig1.438.3|Name=mRNA_P-littoralis_Contig1.438.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=5116bp|location=Sequence derived from alignment at P-littoralis_Contig1:1886605..1891720+ (Pylaiella littoralis U1_48)
GTTATTGTTGCTGTTAGACGGAAAGCAAGAGTGACACAGCAGAGACACAG
AGAAGGACGGGACGAAGAATGGCCGAATTCGGAGCGAAGTTGTGCTCTAA
CCCCGGCTGTCGCCAGCATGATTTTCTCCCCTTCACGTGCTCCGCCTGCG
GCCGTGTTTTCTGCCAAGAGCACATGGCGATTGGGAGCGGGCATGTTTGT
GATCCAGGGGAAGCTTACCTCGCGTCGGTGAGACTTGAGTACGAGTGAGC
GTGTGCGCATCCGTGGGTGCGTCATGCGCTACACAAGAGATCAGAGGTGT
GTGGGATATTGCGTATCCATGTTTGTGCATCTGCTCGAGAAATCTCCACA
ACTGCGTGTATTCTGAATTGCTGTCGACAACTGCTGCTGTCACAGGTTTG
GCCGGCTGCACCCGTTTTTTTTTGTTTTTGCTGCGCTTTCTCATCTCCCT
GTTGATCCTGCCTGACAGTTTCCGTTTGATCATGGCTTGTGCCCGTCCCT
GGTTGTGCGTGATCCTCTCTGGCACACGTAGATATTCTTGAATGTGTAAT
GATTTCCCGGGTGGTGACTCCATAACTTTATTTTTTTCATCAGTGGTTCA
AGTGCGTACAGTCAAACTCGAGTACAGTATTGGATAATATGAGACACACA
CAACACCGCAGCTGCATATGGCAGAGTTCTTGTTCACGATACAAATGTGA
TTACCGTATCATACGAATGTGTAATGGCATGAGAGCGATCGGCAGATCGC
AAGAAGGAAAATGCCCATGTTTTGCTGGTTTAACTCTCCCTCTCCCTCCA
TCCCTCCTTCGTTCTCTCTCACCCTCTGCTCTTTCGTGCCCGGCCGTCAT
TCGCCCGCAAATTGCATACTGGTCCAGCGTAGGGGAGACGGCGAAAGGGT
AACCTCCACATCACCCACCACTACAACAGCAGAAGCAGCAGCAGCAGCAC
TACAGAAGAAACCGTCGGAAATGATGTCTGCGGTAGCTTCTCGGTTCGAC
GGTCGCGAAGACGAGCTCAATGCCACCGTGACCCACGTTCACGTCAAGTC
GTCTAAGGGGAAGGCGGCCGACGGGAATGCTGGGGCTCCCGACAAGTGAG
CGAGTAACTTGTTTTTTCGAAGTGGACGATTTTGTTCGCTTTATATGATA
CAGTGGTGTACTCTTCGCACTATACTAACAAAAACCTGTTTTGTACCGCC
TGAAGCGGGGAGAGGAGTAGGTTTTTCGCGATCAACATATACACAAGAAG
ATGATTCATGTGTACGTGTACGGCATTGGAACGTGACTGCAACAAGACAA
ATGCCGACCTTCACTGCTGCTGCTGTTGTGACAGCTGCGGCCGCTTCAAT
CCCTTACTATCTGTATACTGCTGTTGTACAGAACATGATACTCGTCGCTA
TTGAGAGCAGCGTGTCCAAAGCATGGTATCGTTTTGGTATGTCACTCTTT
GCGGTCGTACTGACCACAAAAACTGCCGAGAGATACGCCGCATTGCAAAA
TATTGGCGTCGACTGCCAACAGGCTACTTGAGAGGAACTCGTAGCTGTCC
GTATCCCTGGCCATGACGCTACCTAGCGCCAAACTGCCTACGTACGCAGG
GTGTTGAAGAACGCTCAGCTAGCCATGGACAAGGCGACGACGGCCAAGGG
GAGGCGGGTATCGGCACAGGTCCGCCGGATGTTACTGAAATCCAAGGCGG
CTGGGGACAACAGGCTTCGTGCGGAAGATCGCTTTTTCCTCGAGGTTCAC
TACAGGTGACTGACTTGCTTGATATGGTGCGCTACCTTCGCTACTGCTGC
AGCTGGTGCTGATGCCGTCGCCTCTGATATTTTTTGTTGGAGTGGTTTAC
ATCGGAAGGCTATGCCTTGCCGCTGTGGGGTTGCCGCTTCTATCGCACAA
TTTACTCAAATCTCTTTCAACAGCTGGTGGACTTTGCGCAACCGCGAAGA
AGCCTGTCTCCCGCATGCTCGAGCGCTGTTTCCTTGTGTACATATGAGCG
CCTGCCCCCTGGTGCACCCTGGGGTGAACGAAAAGATATAGTAGCTGTCG
CTAAAACGAGCGACAGCTGATAGATATAACTGTCGTCAGACGTGTGCGCC
CGCGGGAGGTGGAAGAGACCCTTTCTTCTTCTGCCCGCTGCTGCGTGTGT
TCTGTGTTCTGTCTGCTGACCCCCCTTTAATACCAAGTCATGTAGGGTTG
TAGTCTAAAACCTAGTTTAAGCGAACACACGCACAAACTTTTTTTTCTGC
ATCAGCCCCTATATTTGCGGCGAGACTTCAGGCAAGAATAGAAATCTCGC
TTCGCTCGAATAACCTAACCAAATGACCGTGTCACCGCTCGTCTTTCCAA
CACGCAGCCCTCATCCTCCCACCCTGTCCTCGCGCGACCCCCCCCCCAAC
CACCCCCCCCTCTCTAATATACGTCCATCGGTCTGTCTATCCTCCTTCGG
CGTTGCTGCTGCTGCTGCATTTTGCAGCGGGAACGATACCGATGTTCACC
ACTTGTTCTTCTCGCGGCTGTGGACGGTCGGCCGGACTCTGGACGACATC
TTGAAAACGCGCCGCCGGCATCTGCGACTGGAACCTGGTGAGGAAGACCG
ACCGCTGGAGCTCGCCCGTGAGGATTCGCCGAGCGGTCTGCCTACAGGTA
AAAAAGCGGCGTGTTATCGCTGGAAACCCTCGAGGCGTGCGGATATGTAA
AGACACGCGCGTATTGCTATCACGTGGCTCGGGAAAGTCCAGAAAGAGAA
AGAGAGAGAAAGAGAGAGGACAACATCTCCATTGTACTCTCAATGACGAC
CGTCTCACACGTCAGCCGCGAGCTTGCAATGCATCAGCGGTTGAACTGTA
GAATGTCTTCGATATGCCAAGCGTTTCAAGCGCTTTGCCTACGGAGTGTC
AAATGTTTACACGGAATGTTGTTGGTGTACTTTAAATGCAATGCTCACTC
ACCCAGGGCTATTCTCCTTTTTCGGTGGGCACGTCTCCCGCATCTGCGTG
CGTGCACAATTTAGTATGTACACTGCTGACTTGACACCGAGCCGGGGCGC
CGGCCAAAAGCCCGCCCGACTGGACGTATGATAGCACCGCCATCATGACG
ATGGCACCTGCTGCGCGTTTCACTCCTCACTTTTATCGCACGCAAAAAAG
TTCACATACTCACACCGCAAGTTTTCGCCTCGCGTTTCTTTTTTTTTCAA
GGAGGGATCCTGCACGACTTTCCACCGGAACTTCTGCAGTCGTTCGACGT
CGTTGAGGTGCGACCGAGAGTCCATTCACCCGCAGATTCTTATTCTGTCC
CCGGTACCGCAGCGGGAGCCAGCGGCAGCAGCAGCAGTCCTCCCGTGATG
ACCGTCGCGGCGGCGGGGATTGAGGAAGTGGACGGGCGTGGAGCGGAGAG
AACGGGCTTGGGCGTGGCATCAGAGGAAGCGGCGTCGGCAACAAGAACAG
CAGCAACAAATGCTTGTGGTGGGGATCGCGGAGGGGGGAGGGGAGGAAGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGGGGCGGGGGGCGGGAGGG
CATGACCATCACGGTGAGTATAGACTTGTTGTGTTTGAATCGCCCACGTT
TCACCAGGTGACGTATGAACAGATCGAATTCCAACGAGCACCCCGTTTAA
GTTGTTGTTTGGTGTGTTTTCTTTTGTGCGCCGCCCAACATTTATGATCG
CGTGGTTTTTTGGGATGCAGAAGGCATTTTATCCTGTTCGATAGGTCGCT
TTTGGCTTTTTTGTTGTGCGGTGCAGTAGGCGACTCCTTTGGTCTTTTCC
GCCTTTCCAAACGCCGTGCCTGAGATCTGTTCCATAACACAGGATAAATG
ACAAACGCAGCGATGCATATTCTGGGGACAGAGTTGTCTGTAGATATCAA
TCAGCAAGGCAAGGATGTGGGAGACGTTCAGGCAGTTATAGGCATGCACC
ACAGCAGTGGAGGTCGGTGCCTAATCGAATCATCGAACCTCTTCACTGTG
CTGTTGAGTCAATGTATTGCTGGTGGTTATGTGTGTGTCCTCCCGCTTCG
GAGTTGTTCAACCGTAGCAGCAGAAGTACCACCCGTCAGGTGACACTGCA
AAAAAATCTCAACGTTATCTTTAAAGAAAGTAAAAAAGTAGCTTTTTGGT
GTACTCGGGTCTCGACAGGGATCCACGGGGTCTTTTGGGCTCCGTGTTTG
TTTGCGGTGGGATACGTGATATGTGGTGTCGAGTGATGTGACCTGGCCCT
CTCCCCATGTGGGTCGTGTGTATCTCTCTCTGGAAAAGAACGGCCTTTGA
GTCTCTCTCACTCTCACTCTCTCTGATCTGTTGGAAGAACAGGGTATGAT
ATTGGCACACTTTACTCTCCTCTTGACACATCGTCTGCGTTATAAATTCG
CACACGTTACAGACAGGGTATAGAATCACAAGCATCGTTACTCTTCTTTG
AAGAAAGGGGCAAGTCGCAACTCTATTGAAAGACTTTTAATACCGATCTA
CACTTGGATGGGCTCGCTGGCCTTGTTTTTTCTCATATCTCATCAATGTT
TTCTCTACGCGTGCGAGTCCCTGCGGTTGCTTTAGCTTTTCTTCTACCGC
GTCTCGGGCATACGGAGGCGTAGGTCGCACCTAGAGTTCCAAAAATCACA
AACTTGCAGTTTTTTCAACGGTAGTAGTTCGAGGCTGCACCATCGCCTGC
ATACACATACAGATGTATGTACTCGTTGAGTTGGTGGGCGGCAGCAGTTG
GCTCTAAATCAGCCTCTTCCTCCCCCATTGCCACGGGTAACTCTCGCGAG
CACTACTGATGCTGCTGCTGCTGCTGCTGCTCCTGGCGCTGCTGCTTTGC
CCGTACCGCCGAGACAATTTCAGATCGGCCACGGAAAATTAATCTACGAG
CTGGATGGCGTGGTACCCGATCAAGTGAGCGTGCTGGACATCAAGCGACG
ACTGGAATCCATCACCGGCGTCCCGTTCTTGCGGCAGAAACTCCTGTTCA
AGGGCGTTTTGCGTGACGGCGACAAGATAAGCGCCACCAAGATTCAAGAG
GGCGCGAAGGTCATGCTTCTTGGAGCGGCTGCCGCTGCTGCTGCTGCCAC
TGCTGCCAAGAAGTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1:1886605..1891720+

>mRNA_P-littoralis_Contig1.438.3 ID=mRNA_P-littoralis_Contig1.438.3|Name=mRNA_P-littoralis_Contig1.438.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1308bp|location=Sequence derived from alignment at P-littoralis_Contig1:1886605..1891720+ (Pylaiella littoralis U1_48)
ATGGCCGAATTCGGAGCGAAGTTGTGCTCTAACCCCGGCTGTCGCCAGCA
TGATTTTCTCCCCTTCACGTGCTCCGCCTGCGGCCGTGTTTTCTGCCAAG
AGCACATGGCGATTGGGAGCGGGCATGTTTGTGATCCAGGGGAAGCTTAC
CTCGCGTCGCGTAGGGGAGACGGCGAAAGGGTAACCTCCACATCACCCAC
CACTACAACAGCAGAAGCAGCAGCAGCAGCACTACAGAAGAAACCGTCGG
AAATGATGTCTGCGGTAGCTTCTCGGTTCGACGGTCGCGAAGACGAGCTC
AATGCCACCGTGACCCACGTTCACGTCAAGTCGTCTAAGGGGAAGGCGGC
CGACGGGAATGCTGGGGCTCCCGACAAGGTGTTGAAGAACGCTCAGCTAG
CCATGGACAAGGCGACGACGGCCAAGGGGAGGCGGGTATCGGCACAGGTC
CGCCGGATGTTACTGAAATCCAAGGCGGCTGGGGACAACAGGCTTCGTGC
GGAAGATCGCTTTTTCCTCGAGGTTCACTACAGCGGGAACGATACCGATG
TTCACCACTTGTTCTTCTCGCGGCTGTGGACGGTCGGCCGGACTCTGGAC
GACATCTTGAAAACGCGCCGCCGGCATCTGCGACTGGAACCTGGTGAGGA
AGACCGACCGCTGGAGCTCGCCCGTGAGGATTCGCCGAGCGGTCTGCCTA
CAGGAGGGATCCTGCACGACTTTCCACCGGAACTTCTGCAGTCGTTCGAC
GTCGTTGAGGTGCGACCGAGAGTCCATTCACCCGCAGATTCTTATTCTGT
CCCCGGTACCGCAGCGGGAGCCAGCGGCAGCAGCAGCAGTCCTCCCGTGA
TGACCGTCGCGGCGGCGGGGATTGAGGAAGTGGACGGGCGTGGAGCGGAG
AGAACGGGCTTGGGCGTGGCATCAGAGGAAGCGGCGTCGGCAACAAGAAC
AGCAGCAACAAATGCTTGTGGTGGGGATCGCGGAGGGGGGAGGGGAGGAA
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGGGGCGGGGGGCGGGAG
GGCATGACCATCACGATCGGCCACGGAAAATTAATCTACGAGCTGGATGG
CGTGGTACCCGATCAAGTGAGCGTGCTGGACATCAAGCGACGACTGGAAT
CCATCACCGGCGTCCCGTTCTTGCGGCAGAAACTCCTGTTCAAGGGCGTT
TTGCGTGACGGCGACAAGATAAGCGCCACCAAGATTCAAGAGGGCGCGAA
GGTCATGCTTCTTGGAGCGGCTGCCGCTGCTGCTGCTGCCACTGCTGCCA
AGAAGTGA
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