prot_P-littoralis_Contig113.32.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig113.32.1
Unique Nameprot_P-littoralis_Contig113.32.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length239
Homology
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BLAST of mRNA_P-littoralis_Contig113.32.1 vs. uniprot
Match: A0A6H5KWP8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWP8_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 2.540e-6
Identity = 38/93 (40.86%), Postives = 44/93 (47.31%), Query Frame = 0 
Query:    1 EVYTTSIFGAGGATGQEGSEQAAPLLVWWGTGDMPAAPNSGSPPPQPPRPFAPRAGVGRSPPQPRHQPPHSGQGQ-----HGMSMPFPGSPAS 88
            EVY TS+FG+ G   +     A PL+V WGTGD+PA      P P PPR      G   SPPQ   Q P  G G       G   PFP  P +
Sbjct:   53 EVYATSVFGSVGGAAEVDGGNANPLVVGWGTGDLPAPAEGELPSPNPPRSLVSPGGGPSSPPQRFQQSPSPGSGGGGRRGQGTLQPFPRGPVT 145
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig113.32.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KWP8_9PHAE2.540e-640.86Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..239
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..239
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig113contigP-littoralis_Contig113:137569..138750 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig113.32.1mRNA_P-littoralis_Contig113.32.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig113 137569..138751 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig113.32.1 ID=prot_P-littoralis_Contig113.32.1|Name=mRNA_P-littoralis_Contig113.32.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=239bp
EVYTTSIFGAGGATGQEGSEQAAPLLVWWGTGDMPAAPNSGSPPPQPPRP
FAPRAGVGRSPPQPRHQPPHSGQGQHGMSMPFPGSPASLSAAPPSHHPSS
RFSQQQQQQQLGRRQAPRGPYLPHPRPPPPPPQMQQQQQHGQPMKHYLPG
DPRGGHPPPPPPQLFVPPPHPGDAAAHQRQQQQAGFHGMAGRGHAGQGGG
GGGRGGPQMGGTNSFQQPPTFSHYGPGAQQPSPAAASSS
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