prot_P-littoralis_Contig1.436.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1.436.1
Unique Nameprot_P-littoralis_Contig1.436.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length149
Homology
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BLAST of mRNA_P-littoralis_Contig1.436.1 vs. uniprot
Match: D8LBP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP6_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 2.260e-5
Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 0 
Query:    2 PPVYGP-KRRTLSRSRVLASHKRRWRQSRTAALNDSIDSSPSSPPQRQAPVAAVSFLTPVPKARATGEPVLASPVRTVGDLIIADKMTEQRRKLKQ 96
            PPV GP +RR LSRSRVLAS K+RW Q+R    +  +D +P+S     A  A  + L  + + RA  +P ++    TVGD+++ +K  E+R++ K+
Sbjct:  362 PPVTGPTRRRPLSRSRVLASRKKRWNQNRGGGPDIRVDYTPNSVSLDDAGEAVSAPLASLGR-RAAEDPRVSRSAATVGDMVMKEKEMEKRQQTKK 456
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.436.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBP6_ECTSI2.260e-539.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 84..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:1880742..1881188 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.436.1mRNA_P-littoralis_Contig1.436.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1 1878447..1881676 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1.436.1 ID=prot_P-littoralis_Contig1.436.1|Name=mRNA_P-littoralis_Contig1.436.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=149bp
MPPVYGPKRRTLSRSRVLASHKRRWRQSRTAALNDSIDSSPSSPPQRQAP
VAAVSFLTPVPKARATGEPVLASPVRTVGDLIIADKMTEQRRKLKQKQQQ
QQEQQQSPTKNEKPKGPKEEQQESVAEVASPAKARDTDAGADYPPVSP*
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