mRNA_P-littoralis_Contig1129.2.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1129.2.2
Unique NamemRNA_P-littoralis_Contig1129.2.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1129.2.2 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE)

HSP 1 Score: 581 bits (1498), Expect = 2.660e-201
Identity = 296/467 (63.38%), Postives = 348/467 (74.52%), Query Frame = 3
Query:  108 HHPTPVHNTNTPHCLLVMDELEDAAMAAAA-AMMGQMQSMCSAAADLFED--DTMAGTRYDDDEXXXEDGVNDHGKRTREPWPRPPYRSTAWGMRLAHLESLREDNRLHQNSREAKAFRSDFRVPYEFFLSFVELVRPVFSSCTTDVAGRQCIPLELKVLGVLQVLGRGNCFADVSQFSLMSVSAAEKSFHRFCDCFSSALWHQWVRLPEGDDLKKVESIYSELGFSGAVGSADCTHVAWERCAYSETNNHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLAVSRIENEDPWASYKYKLHDLEGTTSSRTVGWLIVDGGYHRVPLLICPFKTYANDEQRAWSKILE*VRKDIKCLFGRVKGRFRLFKTALLLKTREKIDNAWFTACIIHNMLLQFDGLSNLEKDVDWEGKDGQADETTGPFAAETVVGSMG---VGSDDSAFHQLRGDLVDHFTF 1490
            H P   +    PH  ++ D+L++AA+ AAA A +  + +M     DLFED  +           XXX D   +   RTRE  PRP Y  +AWG+RLA +ESLR  + L Q+SREA+AFR+DFRVPYEFFL FVE+VRPVF +   DV GR C+PLELKVLGVLQVLGRGNCFADV+ FSLMS + AE+SFHRFC CF++ LW  W+RLPEG+ L++VES Y  LG+ GAVGS DCTHV WERCA+SET  HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV+RDL+V R+E E+PW SYKY+++D  G  +  T GWLI DGGYHRVPLLICPFK YAN  ++ WSK LE VRKDI+CLFGR+KGRFRLFKT +L   R KID+AWFTACIIHNMLL FDGL  LE D+DWEGKDG+AD TTG F A TV  S      G DD+AFH  R  LVDHF F
Sbjct:   56 HTPQKHNLRQPPH--IMDDDLDEAAVTAAACASVHSLHTMSMQLNDLFEDGLEEQXXXXXXXXXXXXXDWSAE-AIRTRESRPRPDYNKSAWGLRLAQMESLRCSHNLAQHSREARAFRADFRVPYEFFLEFVEMVRPVFPAREHDVCGRLCVPLELKVLGVLQVLGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDGEADSTTGVFPAVTVADSAEDKVSGDDDAAFHAHRQCLVDHFAF 519          
BLAST of mRNA_P-littoralis_Contig1129.2.2 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE)

HSP 1 Score: 572 bits (1475), Expect = 1.540e-199
Identity = 280/419 (66.83%), Postives = 322/419 (76.85%), Query Frame = 3
Query:  255 DTMAGTRYDDDEXXXEDGVNDHGKRTREPWPRPPYRSTAWGMRLAHLESLREDNRLHQNSREAKAFRSDFRVPYEFFLSFVELVRPVFSSCTTDVAGRQCIPLELKVLGVLQVLGRGNCFADVSQFSLMSVSAAEKSFHRFCDCFSSALWHQWVRLPEGDDLKKVESIYSELGFSGAVGSADCTHVAWERCAYSETNNHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLAVSRIENEDPWASYKYKLHDLEGTTSSRTVGWLIVDGGYHRVPLLICPFKTYANDEQRAWSKILE*VRKDIKCLFGRVKGRFRLFKTALLLKTREKIDNAWFTACIIHNMLLQFDGLSNLEKDVDWEGKDGQADETTGPFAAET-VVGSMGVGSDDS----AFHQLRGDLVDHFTFKQ 1496
            D +AG   D      E    D G   RE   RP Y S+AWG+RLA+LESLR   RL  +SREAKAFRSDFRVP+EFF  FV+LVR VF + T DVAGRQC+PLELKVLGVLQVLGRGNCFADV+Q SLMS   AEKSFHRFCDCFSS LWHQWV LPEG+ LKKV   Y ++G  GAV S DCTH++W  C +SETN HKGKEGYT++V+EA CDH+GRI++STKG+PGAENDKTVVKRDL+V R+  E+PWASYK+ L DLEG T+  T GWLIVDGGYHRVP LICPFK YA++ Q+ WSK  E +RKDI+CLFGR+KGRFRLFKT +L  TREKIDNAWFTACIIHNML QFDGL+NLEKDVDW GKDG+AD+TTG F   T VV + G   DD     AF   R  LV+H  +K+
Sbjct:    7 DALAGESEDGWSDEEEXXXEDFGPCDRETRERPDYSSSAWGVRLANLESLRIAGRLVPSSREAKAFRSDFRVPHEFFRHFVDLVRTVFPTATRDVAGRQCVPLELKVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNMLHQFDGLANLEKDVDWAGKDGEADQTTGAFPVPTAVVDTAGEEVDDGDNTEAFKLFRQQLVNHVAYKK 425          
BLAST of mRNA_P-littoralis_Contig1129.2.2 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE)

HSP 1 Score: 431 bits (1108), Expect = 4.910e-146
Identity = 199/287 (69.34%), Postives = 229/287 (79.79%), Query Frame = 3
Query:  639 MSVSAAEKSFHRFCDCFSSALWHQWVRLPEGDDLKKVESIYSELGFSGAVGSADCTHVAWERCAYSETNNHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLAVSRIENEDPWASYKYKLHDLEGTTSSRTVGWLIVDGGYHRVPLLICPFKTYANDEQRAWSKILE*VRKDIKCLFGRVKGRFRLFKTALLLKTREKIDNAWFTACIIHNMLLQFDGLSNLEKDVDWEGKDGQADETTGPFAAETVVGSMG---VGSDDSAFHQLRGDLVDHFTF 1490
            MS + AE+SFHRFC CF++ LW  W+RLPEG+DL++VES Y  LG+ GAVGS DCTHV WERCA+SET  HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV+RDL+V R+E E+PW SYKY+++D  G  +  T GWLI +GGYHRVPLLICPFK YAN  ++ WSK LE VRKDI+CLFGR+KGRFRLFKT +L   R KID+AWFTACIIHNMLL FDGL  LE D+DWEGKDG+AD TTG F A TV  S      G DD+AFH  R  LVDHF F
Sbjct:    1 MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDGEADSTTGVFPAVTVADSAEDKVSGDDDAAFHAHRQCLVDHFAF 287          
BLAST of mRNA_P-littoralis_Contig1129.2.2 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE)

HSP 1 Score: 362 bits (930), Expect = 7.840e-120
Identity = 169/249 (67.87%), Postives = 194/249 (77.91%), Query Frame = 3
Query:  564 ELKVLGVLQVLGRGNCFADVSQFSLMSVSAAEKSFHRFCDCFSSALWHQWVRLPEGDDLKKVESIYSELGFSGAVGSADCTHVAWERCAYSETNNHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLAVSRIENEDPWASYKYKLHDLEGTTSSRTVGWLIVDGGYHRVPLLICPFKTYANDEQRAWSKILE*VRKDIKCLFGRVKGRFRLFKTALLLKTREKIDNAWFTACIIHNML 1310
             L+VLGVLQ LGRGNCFADV+ FSLMS + AE+SFHRFC CF++ LW  W+RLPEG+DL++VES Y  LG+ GAVGS DCTHV WERCA+SET  HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV                 YKY+++D  G  +  T GWLI DGGYHRVPLLICPFK YAN  ++ WSK LE VRKD++CLFGR+KGRFRLFKT +L   R KID+A FTACIIH ML
Sbjct:    3 NLQVLGVLQALGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVV----------------IYKYEMYDETGDVTKHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDMECLFGRLKGRFRLFKTGILFGDRTKIDDARFTACIIHTML 235          
BLAST of mRNA_P-littoralis_Contig1129.2.2 vs. uniprot
Match: A0A6H5K8G0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8G0_9PHAE)

HSP 1 Score: 317 bits (811), Expect = 4.070e-101
Identity = 173/311 (55.63%), Postives = 206/311 (66.24%), Query Frame = 3
Query:  177 AAMAAAAAMMGQMQSMCSAAADLFEDDTMAGTRYD--DDEXXXEDGVNDHGKRTREPWPRPPYRSTAWGMRLAHLESLREDNRLHQNSREAKAFRSDFRVPYEFFLSFVELVRPVFSSCTTDVAGRQCIPLELKVLGVLQVLGRGNCFADVSQFSLMSVSAAEKSFHRFCDCFSSALWHQWVRLPEGDDLKKVESIYSELGFSGAVGSADCTHVAWERCAYSETNNHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLAVSRIENEDPWASYKYKLHDLEGTTSSRTVGWLIVDGGYHRV 1103
            AA+AAA+A+    Q+M   +A+L   D +AG   D   DE   E+   D G+  RE   RP Y S+AWG+RLA+LE LR   RL  +SREAKAFRSDF                                 +  VLGVLQVLGRGNCFADV+Q SLMS   AEKSFHRFCDCFSS LWHQWV LPEG+ LKKV   Y ++   G V S DCTH++   C +SETN HKGKEGYT++V+EA CDH+GRI++STKG+PGAENDKTVVKRDL+V R+  E+PWA YK+ L DLEG T+  T GWLIVDGGYHRV
Sbjct:    8 AALAAASALQSTNQAM---SANLR--DALAGESEDGWSDEVEEEE---DFGRCDRETRERPDYSSSAWGVRLANLERLRIAGRLVPSSREAKAFRSDF---------------------------------QGSVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMVCPGVVASVDCTHISLPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWARYKFVLFDLEGNTTEHTGGWLIVDGGYHRV 277          
BLAST of mRNA_P-littoralis_Contig1129.2.2 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE)

HSP 1 Score: 303 bits (777), Expect = 1.080e-96
Identity = 133/241 (55.19%), Postives = 177/241 (73.44%), Query Frame = 3
Query:  639 MSVSAAEKSFHRFCDCFSSALWHQWVRLPEGDDLKKVESIYSELGFSGAVGSADCTHVAWERCAYSETNNHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLAVSRIENEDPWASYKYKLHDLEGTTSSRTVGWLIVDGGYHRVPLLICPFKTYANDEQRAWSKILE*VRKDIKCLFGRVKGRFRLFKTALLLKTREKIDNAWFTACIIHNMLLQFDGLSNLEKDVDWEG 1361
            MSV+ AEKSFH FC+ FS+ALW  WV+LP GD+LK+VE ++ + G+ GA+ S DCTH  W     SE   + GKEGY +VV EA CDH GRIIA+TK YPG+ENDKT+++RD ++ RI +E+PW+S KYKL++ +G+ +     WL+VDGGY ++PLLI P K +A  E+  WS+ LE +RKDI+C +GRVKGRFRLFK  +L KTR+ IDN WFTACI+HNML  +D L  + +   W+G
Sbjct:    1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAISSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKIPLLIPPIKHHATVEEHDWSRRLESMRKDIECCYGRVKGRFRLFKAGILYKTRDSIDNPWFTACILHNMLHHYDKLDVMTEATGWQG 241          
BLAST of mRNA_P-littoralis_Contig1129.2.2 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 311 bits (797), Expect = 2.610e-96
Identity = 165/415 (39.76%), Postives = 236/415 (56.87%), Query Frame = 3
Query:  279 DDDEXXXEDGVNDHGKRTREPWPRPPYRSTAWGMRLAHLESLREDNRLHQNSREAKAFRSDFRVPYEFFLSFVELVRPV--FSSCTTDVAGRQCIPLELKVLGVLQVLGRGNCFADVSQFSLMSVSAAEKSFHRFCDCFSSALWHQWVRLPEGDDLKKVESIYSELGFSGAVGSADCTHVAWERCAYSETNNHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLAVSRIENEDPWASYKYKLHDLEGTTSSRTVGWLIVDGGYHRVPLLICPFKTYANDEQRAWSKILE*VRKDIKCLFGRVKGRFRLFKTALLLKTREKIDNAWFTACIIHNMLLQFDGLSNLEKDVDWEGKDG-----QADETTGPFAAETVVGSMGVGSDDSAFHQLRGDLVDHFTFKQKK 1502
            DD E   ED       + R  + R  Y  + W   L  L   RE       +REA+ FR++FRVPY FF+  VELVR    F +  +DV GRQ +P+ELKVL  LQ+L RGN FAD+   S +S      +FHRFC  F++ L+ ++V LP G+DL+KV   Y  +GF GAVGS D TH+ W  C Y++   + GKEG  +V F+   DH+GR++A T+G+ GA NDKT+++ D AV+RI  +  +   KYKL+  +G        +L+VD GYH+   LI P K   +     +SK LE  RKD++C FG +KGRFR+ K A+    +E IDN +FT CI+HNML  FD   ++ ++ +W G  G       D  T   +  ++ G       ++ F  LR  LV +F ++++K
Sbjct:   78 DDLELDTEDDEASREVKRRRVYVRKDYTKSGWWQELMEL---RETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREK 489          
BLAST of mRNA_P-littoralis_Contig1129.2.2 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE)

HSP 1 Score: 303 bits (777), Expect = 6.800e-94
Identity = 165/410 (40.24%), Postives = 232/410 (56.59%), Query Frame = 3
Query:  324 KRTREPWPRPPYRSTAWGMRLAHLESLREDNRLHQNSREAKAFRSDFRVPYEFFLSFVELVR----PVFSSCTTDVAGR---QCIPLELKVLGVLQVLGRGNCFADVSQFSLMSVSAAEKSFHRFCDCFSSALWHQWVRLPEGDDLKKVESIYSELGFSGAVGSADCTHVAWERCAYSETNNHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLAVSRIENEDPW-ASYKYKLHDLEGTTSSRTVGWLIVDGGYHRVPLLICPFKTYANDEQRAWSKILE*VRKDIKCLFGRVKGRFRLFKTALLLKTREKIDNAWFTACIIHNMLLQFDGLSNLEKDVDWEGKDGQADET--------TGPFAAETVVGSMGVGSDDSAFHQLRGDLVDHFTFKQKKG 1505
            KR R   PR  YR+  W   L   + L++ +     +REAK FR  FRVPY FFLS V+ V+    P F++   ++ GR   +CIP+E KVL VL++LGRGN F DVS+ + M  +     FH+F + F+  ++  WVR+P  D+LK +   Y E+G SGA+GS D TH+ W  C YS+ ++H GKEGY ++VF     H  R+++ T+G+PGA+NDKT++K D     + N   W    +Y L   +G        WLIVDGGYH    L  P +  +N  +  + + LE VRKD +C FG VKGRFR+ K   L + +E+IDN +FT  I+HNMLL +DG+  LE D DW G DG  D+         + P   + VV        D  F  LR  LV +F ++  +G
Sbjct:   50 KRRRTVRPRADYRTLPWARMLEKADLLQDPS-----TREAKQFRRRFRVPYPFFLSLVDEVKAGNWPGFTTDEFELGGRGTRRCIPVETKVLAVLRILGRGNYFDDVSEVTGMGEATVNHMFHKFTERFACEIFPVWVRMPNEDELKDIMKTYDEVGMSGAMGSMDGTHIEWTLCPYSQRSSHIGKEGYATLVFNVAVSHDMRVLSCTRGFPGAQNDKTIIKFDKFAMAVRN--GWYKDVEYTLKGEDGADIKEKGPWLIVDGGYHNWKQLQSPIRAPSNKAESGFKRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFTCIILHNMLLAYDGIELLEPDCDWAGADGDLDKNIEHPVVRMSAPTHEDAVVEC------DDGFDALRQKLVTNFAYRWGQG 446          
BLAST of mRNA_P-littoralis_Contig1129.2.2 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 303 bits (775), Expect = 3.160e-93
Identity = 167/452 (36.95%), Postives = 254/452 (56.19%), Query Frame = 3
Query:  177 AAMAAAAAMMGQMQSMCSAAADLFEDDTMAGTRYDDDEXXXEDGVNDHGK-RTREPWPRPPYRSTAWGMRLAHLESLREDNRLHQNSREAKAFRSDFRVPYEFFLSFVELV--RPVFSSCTTDVAGRQCIPLELKVLGVLQVLGRGNCFADVSQFSLMSVSAAEKSFHRFCDCFSSALWHQWVRLPEGDDLKKVESIYSELGFSGAVGSADCTHVAWERCAYSETNNHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLAVSRIENEDPWASYKYKLHDLEGTTSSRTVGWLIVDGGYHRVPLLICPFKTYANDEQRAWSKILE*VRKDIKCLFGRVKGRFRLFKTALLLKTREKIDNAWFTACIIHNMLLQFDGLSNLEKDVDWEGKDGQADETT-GPFAAETVVGSMGVGSD------DSAFHQLRGDLVDHFTFKQKK 1502
            AA + A A   Q Q     A DL  DD       D+ +   E+   D+ + + R  +PR  Y  + W ++L  L+ L  D  +   SR A+ FR  FR+PY FF+  V LV  R  F +   D +GR+ IP++LKVL  LQ+L RGNCFAD+   S +S+  A  +FHRF   F+  ++ + + LP GD  KKV + Y  LGFSGA GS D TH+ W  C Y++  ++ GKEGY +V ++   DH  R++A T G+ G+ NDK++++ D AV++I  +  ++  ++ +++ +GT       +L+VD GYH+   LI P K   +    A+SK LE VRKD++C FG VKGRFR+ K ++    +E IDN +FT CI+HNML  +D  S +E++ +W G  G  +     P    + VG+ G  +       +S F+  R  L+  F +++ K
Sbjct:   30 AAFSVALAAFNQQQQRTLVAWDLVLDD------LDELDPDSEEEEEDNREIKRRRVYPRKDYNISGWAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSK 475          
BLAST of mRNA_P-littoralis_Contig1129.2.2 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 287 bits (734), Expect = 1.780e-87
Identity = 148/378 (39.15%), Postives = 227/378 (60.05%), Query Frame = 3
Query:  387 AHLESLREDNRLHQNSREAKAFRSDFRVPYEFFLSFVELVRPV--FSSCTTDVAGRQCIPLELKVLGVLQVLGRGNCFADVSQFSLMSVSAAEKSFHRFCDCFSSALWHQWVRLP--EGDDLKKVESIYSELGFSGAVGSADCTHVAWERCAYSETNNHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLAVSRIENEDPWASYKYKLHDLEGTTSSRTVGWLIVDGGYHRVPLLICPFKTYANDEQRAWSKILE*VRKDIKCLFGRVKGRFRLFKTALLLKTREKIDNAWFTACIIHNMLLQFDGLSNLEKDVDWEGKDGQADETTGPFAAETVVGSMGVGSD---DSAFHQLRGDLVDHFTFKQK 1499
            A  + L +++     S  AK FR DFRVPY FFL  VELV+    F++   D  GR+C P+E KVL  L +LGRGN F  +   S MS    +K FH+FC+ F++ ++ + + LP  E  +L +V   Y +LGF GA+GS D TH+ W RC Y++  ++ GKEG  +V ++   +HAGR++A T+G+ G+ NDKT++  D AV RI  +  +A   + +H  +GTT +    +LIVD GYH+  +LI P K   ++    +SK LE VRKD++C FG +K RFR+ K A+  + +E++D  +FT CI+HNML   DG+  LE+DV+W G   +   T+G     + VG+  +      ++A  +L+  L  +F +++K
Sbjct:   64 AWAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGS-AELQNTSGHNLDSSSVGTKDLNDKPQVEAAHAELKRKLTTNFLYRKK 440          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1129.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0H2_9PHAE2.660e-20163.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV45_9PHAE1.540e-19966.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRU1_9PHAE4.910e-14669.34Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JY35_9PHAE7.840e-12067.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8G0_9PHAE4.070e-10155.63DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K604_9PHAE1.080e-9655.19Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE2.610e-9639.76Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8I3_9PHAE6.800e-9440.24Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAU4_9PHAE3.160e-9336.95Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE1.780e-8739.15Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1129contigP-littoralis_Contig1129:2717..6532 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog44056.XP_009041040.1
PFAMsPlant_tran
Model size1691
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.64e-35
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size1017
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789456.204042-UTR-P-littoralis_Contig1129:2716..28741680789456.204042-UTR-P-littoralis_Contig1129:2716..2874Pylaiella littoralis U1_48UTRP-littoralis_Contig1129 2717..2874 +
1680789456.2525432-UTR-P-littoralis_Contig1129:6016..65321680789456.2525432-UTR-P-littoralis_Contig1129:6016..6532Pylaiella littoralis U1_48UTRP-littoralis_Contig1129 6017..6532 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789456.2172475-CDS-P-littoralis_Contig1129:2874..32881680789456.2172475-CDS-P-littoralis_Contig1129:2874..3288Pylaiella littoralis U1_48CDSP-littoralis_Contig1129 2875..3288 +
1680789456.2250195-CDS-P-littoralis_Contig1129:4415..49431680789456.2250195-CDS-P-littoralis_Contig1129:4415..4943Pylaiella littoralis U1_48CDSP-littoralis_Contig1129 4416..4943 +
1680789456.2335694-CDS-P-littoralis_Contig1129:5941..60161680789456.2335694-CDS-P-littoralis_Contig1129:5941..6016Pylaiella littoralis U1_48CDSP-littoralis_Contig1129 5942..6016 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1129.2.2prot_P-littoralis_Contig1129.2.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1129 2875..6016 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1129.2.2

>prot_P-littoralis_Contig1129.2.2 ID=prot_P-littoralis_Contig1129.2.2|Name=mRNA_P-littoralis_Contig1129.2.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=339bp
MDELEDAAMAAAAAMMGQMQSMCSAAADLFEDDTMAGTRYDDDEDEDEDG
VNDHGKRTREPWPRPPYRSTAWGMRLAHLESLREDNRLHQNSREAKAFRS
DFRVPYEFFLSFVELVRPVFSSCTTDVAGRQCIPLELKVLGVLQVLGRGN
CFADVSQFSLMSVSAAEKSFHRFCDCFSSALWHQWVRLPEGDDLKKVESI
YSELGFSGAVGSADCTHVAWERCAYSETNNHKGKEGYTSVVFEAICDHAG
RIIASTKGYPGAENDKTVVKRDLAVSRIENEDPWASYKYKLHDLEGTTSS
RTVGWLIVDGGYHRVPLLICPFKTYANDEQRAWSKILE*
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mRNA from alignment at P-littoralis_Contig1129:2717..6532+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1129.2.2 ID=mRNA_P-littoralis_Contig1129.2.2|Name=mRNA_P-littoralis_Contig1129.2.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3816bp|location=Sequence derived from alignment at P-littoralis_Contig1129:2717..6532+ (Pylaiella littoralis U1_48)
CTGGGAGGCTGTTTTTTGCAAAAGTATGGCCATACTTTTGGGCATGCGCC ACCTCGTCCAAAAGTTTGTCAGACGCGGCGGGTTGATTGTGCCGCACTAC ATGCACACATCACCCGACACCCGTTCACAACACGAACACTCCCCACTGTC TCCTCGTGATGGACGAGCTTGAGGACGCGGCCATGGCCGCCGCCGCAGCT ATGATGGGCCAGATGCAGTCCATGTGTAGTGCCGCCGCTGATTTGTTCGA AGATGACACCATGGCAGGAACGAGGTACGATGATGATGAGGACGAAGATG AGGACGGCGTCAACGACCATGGCAAGCGCACGCGAGAGCCGTGGCCTCGC CCGCCGTACCGCTCAACCGCCTGGGGCATGAGACTGGCACACTTAGAGAG CCTTAGAGAGGACAACCGGCTTCATCAAAACAGCCGTGAAGCCAAGGCGT TCAGGTCAGATTTCCGTGTGCCGTACGAGTTCTTTCTGTCGTTCGTGGAG CTGGTGAGACCCGTGTTTTCGTCATGTACAACCGATGTGGCTGGACGTCA GTGCATCCCCCTCGAGCTCAAGGTGCGTCCGATTCTTGTGTGTGTGGTTT GTTCTGCCCGCTTGCTGCAAACCCAAACTCAGCCCAATGCCGCGGGGGTT GAGGCTGACTAGTAGCTGCTTTACGTTGGCTCGGCATGCTCTGTAGGTGC GTTCATACATGTGAGAGTTGGTGCTGTATGTTTCAGCAATACGATTGTAT AATATAATGTTGCTTCGGTTCGAGACATAAGGATGGGCGAAACCGGTATC GGATGCAGCCCCGCGATCTGTCTTCCCAGCACTTCCTTTACAGGAGTAGG TCGCTGGTGTGCGTGAGTATCATGGGCTGGCATCGAAAGGATGCACGCTG CAGCAACGTCGTACCCTGCTGTAGTACTACCCATACCATACCATCGTAGA ACAAACAGCAATATCGCATGGTATGATAAAATGTGTACAGCAATATCTTG TACGATATCATCGTCATGATGCACTTTAGTTGATACAACGTGCGTACGCA CGCACGCACAATACAGCATGTTTTCCCTCTCTGATGGACTGGGTTGCGCG TGTCTACAGCAGTAGAGTTCGGATTACTACAAGTGGTCATCTCCTTACTC ATTCACGGCCCCGGTCTGCTGAAGTACGTGGAGTGTATTTGGTGTCAGCA ACAACTCTGCTGTAGACAAGCAGTACGGCAGACACTTAGTAACCCTTGTA CAGCAGCATGAAGTTCTATTGTGATCTTTGGTCTGCTGAAGTACGTACAT CAGTGTATTTGGTGTCAAAAAGAAGACAAGCAGTATGGCAGACACTTGGT TACCCTTGTACAGCAGTATGAAGTTCTATTGTGATCTGCGACAGCGCAAG GAGGCGTGTTAGATTGGCGATGGACTATATACGAGTCTCAGCAGTAGATG TACCGGAAACGATATCCCAAGGAGATACATGTTGAGTGAGCTATCGCTGA GCAGGCACGCAGTGGACTAATACGGATAACAACACTGCTGTACTGCTGAG ATGTGGAGGCGTTTTTGCGGTTGTACGATATGACGAGGACAGCTTCTGAA TTGCAAAATGCTTGAAAATTCCAGTTTGCCGTGCTCGCATACTACGTTCT TCGTTCTCATGAATAACTGCGACACCACTTCCTTTGGCGAAAAAAGCAGG TGCTGGGGGTTCTGCAGGTCTTGGGGAGAGGCAACTGCTTCGCGGATGTG TCGCAGTTTTCGCTGATGAGCGTATCTGCGGCGGAGAAATCTTTTCACCG TTTCTGCGACTGTTTCTCGTCGGCGCTGTGGCACCAGTGGGTTCGGCTGC CTGAGGGCGACGACCTAAAAAAAGTGGAGAGCATCTACAGCGAGTTGGGG TTTTCGGGGGCCGTGGGGTCAGCCGACTGCACCCACGTGGCGTGGGAGCG CTGCGCTTATTCGGAGACGAACAACCACAAGGGGAAGGAGGGGTACACGT CGGTTGTGTTCGAGGCGATCTGCGATCACGCTGGACGTATCATCGCCTCT ACAAAGGGTTACCCCGGGGCGGAGAACGACAAGACGGTCGTTAAGCGTGA CTTGGCCGTGAGCCGAATTGAGAACGAGGACCCGTGGGCGAGCTACAAGT ACAAGTTGCACGATCTTGAGGGTACTACTTCGTCGCGCACGGTTGGTTGG CTGATCGTCGACGGGGGGTACCACCGTGTGAGTAACCGTGTATGCCGCGA GGGCAATAGTGTCGACTAAACCAGTCTATTATTATTATTATTACACAGCG TTGCAGACTGAGAGTGCTGACCTCCCCCCCCCCCCTACCACAAAGGGTTG GGGTTGTACCGAAGGGCTGCTTTTTCATCTCACGACGCCCCCCCCAAAAA AAAAAAAAAACACGGCAGTAGCTGTCAAGCATAGGTCTTGCTTTCTAAAG CCATAGGCTAGTGCTGAATAATATCAACTGCTGTACTTTGCCTTGGAGAC CCCATATCCAATAAGATGTTAACATATTCAACCTTAATTCAGATATGCAA GCAACATCATCCCGAGGTGTCCTTGGAGAATTCGCTGTACAGCACCGGTA GAGCTGTATCATACAGCAGTACACACAAGCAGTCGTTGTCCACACGCATA TTTGCTTGCCCAAAGTGCCATTGGTAGATCATAGCGCCCTCTTGTTTGTC TCTGACTTTGTTTTGTGTGGCACATTAGTCTTTGCCTTTAAAATTTTAAC GCCATGGGTTCATATGCAAGCGGGCATACGCCCGGGGTGTGCTTGGGGGG GTTCTCTACAGCAATATGTTGGTGTGCTCTGGAGGATTCACTAGGTTTGT GGTGTTGGAGTGTCATACAGCACTGTTGGTGCATCTATTTTTGCGTACCC CTGAGAGTGTATCGTTTGTTCTTCTCGTTCCGATCGTTTTCGGTTATAAC TGCTGTACTACACTCGGGCATTGCTCCTGCTGTACACGCAGCGACAACAA CGGAAAGTCGACCAGGTCGTTGCGTGCCACGTTCACTCTTCATTATTTCC TCGCGGCACCAGTTTGTAATGCTCTTCAAGTATATTTTGTCACTGCCGTG TCGCGTTTGTTTCAAGTTTTCCAATGCTGGCCTCCGGATCAACTGAACAC AGGCCCTGACAACGTCGTTGCGTTCCTTTTGTTTTTTATTTCCTTTTTTT CCCTCTCTATTTCGCCCGTCAACAGGTACCCCTTCTCATCTGCCCGTTCA AAACGTACGCGAACGATGAGCAGCGGGCGTGGAGCAAAATATTGGAGTAA GTTCGCAAAGACATAAAGTGCCTGTTCGGAAGAGTCAAGGGGCGGTTCAG GCTGTTCAAGACCGCTCTGTTGTTGAAAACCCGGGAGAAAATCGACAACG CGTGGTTCACGGCGTGCATCATTCACAACATGCTCCTTCAATTCGACGGC CTGTCGAACCTCGAGAAGGACGTGGACTGGGAAGGAAAGGATGGACAGGC GGACGAGACCACCGGCCCGTTCGCCGCGGAGACGGTTGTTGGCAGCATGG GTGTCGGGAGCGACGACTCCGCCTTCCACCAGCTCAGGGGAGACCTGGTA GACCACTTCACATTCAAGCAGAAGAAGGGGGGGTTTCCTGGTTCCGCGCG GCGAGATGAACTTAGTTTACGGTAGCACAGAGGTTGTAGTGTCTAGCAGG TTACGGTTATTGATAGTAAATCTACAAAGGCCCTTCCAACCTCATTATGG GGGTGGGGGTGCTCGCCCACCTATAGTTTGGTGTTGTATTTGTTAGAGAT TAGCGCCTGAGCATGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig1129:2717..6532+

>mRNA_P-littoralis_Contig1129.2.2 ID=mRNA_P-littoralis_Contig1129.2.2|Name=mRNA_P-littoralis_Contig1129.2.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1017bp|location=Sequence derived from alignment at P-littoralis_Contig1129:2717..6532+ (Pylaiella littoralis U1_48)
ATGGACGAGCTTGAGGACGCGGCCATGGCCGCCGCCGCAGCTATGATGGG
CCAGATGCAGTCCATGTGTAGTGCCGCCGCTGATTTGTTCGAAGATGACA
CCATGGCAGGAACGAGGTACGATGATGATGAGGACGAAGATGAGGACGGC
GTCAACGACCATGGCAAGCGCACGCGAGAGCCGTGGCCTCGCCCGCCGTA
CCGCTCAACCGCCTGGGGCATGAGACTGGCACACTTAGAGAGCCTTAGAG
AGGACAACCGGCTTCATCAAAACAGCCGTGAAGCCAAGGCGTTCAGGTCA
GATTTCCGTGTGCCGTACGAGTTCTTTCTGTCGTTCGTGGAGCTGGTGAG
ACCCGTGTTTTCGTCATGTACAACCGATGTGGCTGGACGTCAGTGCATCC
CCCTCGAGCTCAAGGTGCTGGGGGTTCTGCAGGTCTTGGGGAGAGGCAAC
TGCTTCGCGGATGTGTCGCAGTTTTCGCTGATGAGCGTATCTGCGGCGGA
GAAATCTTTTCACCGTTTCTGCGACTGTTTCTCGTCGGCGCTGTGGCACC
AGTGGGTTCGGCTGCCTGAGGGCGACGACCTAAAAAAAGTGGAGAGCATC
TACAGCGAGTTGGGGTTTTCGGGGGCCGTGGGGTCAGCCGACTGCACCCA
CGTGGCGTGGGAGCGCTGCGCTTATTCGGAGACGAACAACCACAAGGGGA
AGGAGGGGTACACGTCGGTTGTGTTCGAGGCGATCTGCGATCACGCTGGA
CGTATCATCGCCTCTACAAAGGGTTACCCCGGGGCGGAGAACGACAAGAC
GGTCGTTAAGCGTGACTTGGCCGTGAGCCGAATTGAGAACGAGGACCCGT
GGGCGAGCTACAAGTACAAGTTGCACGATCTTGAGGGTACTACTTCGTCG
CGCACGGTTGGTTGGCTGATCGTCGACGGGGGGTACCACCGTGTACCCCT
TCTCATCTGCCCGTTCAAAACGTACGCGAACGATGAGCAGCGGGCGTGGA
GCAAAATATTGGAGTAA
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