mRNA_P-littoralis_Contig1129.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1129.1.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 326 bits (836), Expect = 1.860e-108 Identity = 153/168 (91.07%), Postives = 155/168 (92.26%), Query Frame = 3
Query: 48 GQGECIRKHLQPSWMSTPTVQKVFHQFCEHVATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVKEGFTESTNDKTVICCDEAVDGIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGY 551
G+G SWMSTPTVQKVFHQFCEH ATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAV EGFT STNDKT+ICCDEAVD IRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGY
Sbjct: 136 GRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGY 303
BLAST of mRNA_P-littoralis_Contig1129.1.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 265 bits (678), Expect = 2.040e-85 Identity = 120/168 (71.43%), Postives = 136/168 (80.95%), Query Frame = 3
Query: 48 GQGECIRKHLQPSWMSTPTVQKVFHQFCEHVATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVKEGFTESTNDKTVICCDEAVDGIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGY 551
G+G C Q SWMS TVQ +FH+FC+H A EMYDEHI+LPSE+NGELD VM QY++LGF GAMGS DVTHIGWS+CPYN RSYTGKEG PTVGYQVTVNHAGR +AV EGFT+STNDKT +C D V+ IRTD QY EK F V+ +DGTT TLKGCYL+VDNGY
Sbjct: 107 GRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGY 274
BLAST of mRNA_P-littoralis_Contig1129.1.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI) HSP 1 Score: 261 bits (666), Expect = 2.110e-83 Identity = 119/168 (70.83%), Postives = 135/168 (80.36%), Query Frame = 3
Query: 48 GQGECIRKHLQPSWMSTPTVQKVFHQFCEHVATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVKEGFTESTNDKTVICCDEAVDGIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGY 551
G+G C Q SWMS TVQ +FH FC+H A EMYDEHI+LPSE+NGELD VM QY++LGF GAMGS DVTHI W++CPYN RSYTGKEG PT+GYQVTVNHAGR AV EGFT STNDKT++C D AV+ IRTDKQY EK F V+ +DGTT TLKGCYL+VDNGY
Sbjct: 134 GRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGY 301
BLAST of mRNA_P-littoralis_Contig1129.1.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 234 bits (598), Expect = 8.860e-73 Identity = 114/196 (58.16%), Postives = 132/196 (67.35%), Query Frame = 3
Query: 48 GQGECIRKHLQPSWMSTPTVQKVFHQFCEHVATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVKEGFTESTNDKTVICCDEAVDGIRTDKQYA----------------------------EKPFTVHKKDGTTETLKGCYLIVDNGY 551
G+G C Q SWMS TVQ +FH+FC H A EMYDE I LP+EE+G+LD VM QY++LGF GA+GS DVTHI WSRCPYNQ RSYTGKEG PT+ YQVTV+HAGR +AV EGFT STNDKT++C D AV+ I TDK Y EK F V+ +DGTT TLKGCYL+VDNGY
Sbjct: 94 GRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGY 289
BLAST of mRNA_P-littoralis_Contig1129.1.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 217 bits (553), Expect = 8.320e-68 Identity = 99/134 (73.88%), Postives = 114/134 (85.07%), Query Frame = 3
Query: 150 MYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVKEGFTESTNDKTVICCDEAVDGIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGY 551
MYDEHI LP+EE+G+LD V+ QY++LGF GAMGS DVTHI WSRCPYNQ RSYTGKEG PT+GYQVTV+HAGR +AV EGFT STNDKT +C D AV+ IRTDKQY EK F V+ +DGTT TLKGCY++VDNGY
Sbjct: 1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGY 134
BLAST of mRNA_P-littoralis_Contig1129.1.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 203 bits (516), Expect = 9.470e-62 Identity = 98/168 (58.33%), Postives = 115/168 (68.45%), Query Frame = 3
Query: 48 GQGECIRKHLQPSWMSTPTVQKVFHQFCEHVATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVKEGFTESTNDKTVICCDEAVDGIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGY 551
G+G C Q SWMS TVQ VFH+FC A EMYDEHI LP+EE+G+L VM QY++LG CPYNQ RSYTGK+ PT+ YQVTV+HA R +AV EGFT STNDKT++C D AVD IRTDKQY EK F ++ +DGTT TLKGCY + DNGY
Sbjct: 29 GKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGY 179
BLAST of mRNA_P-littoralis_Contig1129.1.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 201 bits (512), Expect = 3.010e-60 Identity = 96/183 (52.46%), Postives = 125/183 (68.31%), Query Frame = 3
Query: 3 MPPSGAQSAGVSDYTGQGECIRKHLQPSWMSTPTVQKVFHQFCEHVATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVKEGFTESTNDKTVICCDEAVDGIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGY 551
PP Q +G S++S TV FH+FC++ A E+YDE+++LP+ E+ L +VM QY+++GFPGA+GSTDVTHI W CPYNQ R YTGKEGKPTV +QVTV+H+GRVLAV GFT +TNDKT+I D+AV IRTD Y E+ + ++ +DG KGCYL+VDNGY
Sbjct: 77 FPPPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGED--LRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGY 257
BLAST of mRNA_P-littoralis_Contig1129.1.1 vs. uniprot
Match: A0A6H5KFR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFR8_9PHAE) HSP 1 Score: 200 bits (508), Expect = 4.050e-59 Identity = 97/168 (57.74%), Postives = 111/168 (66.07%), Query Frame = 3
Query: 48 GQGECIRKHLQPSWMSTPTVQKVFHQFCEHVATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVKEGFTESTNDKTVICCDEAVDGIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGY 551
G+G C Q SWMS T N ELD VM QY++LGF G+MGS DVTHIGWS+CPYN RSYTGKEG P +GYQV V+HAGR +AV EGFT STNDKT++C D AV+ IRTDKQY EK F V+ +DGTT TLKGCYL+VDNGY
Sbjct: 170 GRGNCFASIYQMSWMSAKT---------------------------NDELDHVMEQYDRLGFSGSMGSMDVTHIGWSKCPYNLARSYTGKEGVPAIGYQVMVSHAGRAIAVTEGFTCSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGY 310
BLAST of mRNA_P-littoralis_Contig1129.1.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 198 bits (503), Expect = 5.400e-58 Identity = 92/156 (58.97%), Postives = 120/156 (76.92%), Query Frame = 3
Query: 84 SWMSTPTVQKVFHQFCEHVATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVKEGFTESTNDKTVICCDEAVDGIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGY 551
S++S TV FH+FC++ A E+YDE+++LP+ E+ L +VM QY+++GFPGA+GSTDVTHI W CPYNQ R YTGKEGKPTV +QVTV+H+GRVLAV GFT +TNDKT+I D+AV IRTD Y E+ + ++ +DG KGCYL+VDNGY
Sbjct: 195 SFISFQTVASTFHRFCKYFAAELYDEYVYLPTGED--LRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGY 348
BLAST of mRNA_P-littoralis_Contig1129.1.1 vs. uniprot
Match: A0A6H5JCU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU6_9PHAE) HSP 1 Score: 197 bits (500), Expect = 5.470e-58 Identity = 91/168 (54.17%), Postives = 114/168 (67.86%), Query Frame = 3
Query: 48 GQGECIRKHLQPSWMSTPTVQKVFHQFCEHVATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVKEGFTESTNDKTVICCDEAVDGIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGY 551
G+G C Q S MS P FH+FC+H A E+++EHI+LP+ D VM Y+KLG GA+GSTDVTHIGW CP+ GRSYTGKEG PT+ YQVTV+HAGR +A+ GFT +TNDKT+I D V I+TD QY ++ + + + DGT KGCY IVDNGY
Sbjct: 259 GRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPT--GSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTKRTYKLRRADGTFRERKGCYYIVDNGY 424 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1129.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1129.1.1 >prot_P-littoralis_Contig1129.1.1 ID=prot_P-littoralis_Contig1129.1.1|Name=mRNA_P-littoralis_Contig1129.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=183bp MPPSGAQSAGVSDYTGQGECIRKHLQPSWMSTPTVQKVFHQFCEHVATEMback to top mRNA from alignment at P-littoralis_Contig1129:187..1727- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1129.1.1 ID=mRNA_P-littoralis_Contig1129.1.1|Name=mRNA_P-littoralis_Contig1129.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1541bp|location=Sequence derived from alignment at P-littoralis_Contig1129:187..1727- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1129:187..1727- >mRNA_P-littoralis_Contig1129.1.1 ID=mRNA_P-littoralis_Contig1129.1.1|Name=mRNA_P-littoralis_Contig1129.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=549bp|location=Sequence derived from alignment at P-littoralis_Contig1129:187..1727- (Pylaiella littoralis U1_48)back to top |