mRNA_P-littoralis_Contig1128.8.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1128.8.1 vs. uniprot
Match: A0A6H5JRT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT7_9PHAE) HSP 1 Score: 258 bits (658), Expect = 4.530e-79 Identity = 154/327 (47.09%), Postives = 197/327 (60.24%), Query Frame = 1
Query: 340 IQASARVITAEKEFRAETGTTLKVQVAGSSQIEMSSVRHQALGESRPWSFFSHCCNGLGGNIRSVQRCAVCDSHTTILTTCIRAPSFMTDLGTNHLESMNGSIAAKATKRSDFPLTHWARAQIGIMNRTSPDGALGVANRIRHKAELPPLTGTAGKKMEAQSRRNAGTVVGQAFLTPQQRQANSTARYKKKDKVSARTALHKQNHDRRATANPLKAFGHGTHGVSSVRDKLESISGVAYAGGGEGCEGIGSTPSA-GKRKRRGRATSEETTEYTAAGSNSEKNNELASARRMGARTESRVCSACVFARVGREFLAERKHARKGKTIC 1317
I A+ ++ AEK FR GTTL VQV GSSQIE SSVRHQA GESR W+FFSHCCN LGGNIRS C CDSHT CIR+ +FM DLGT LES+NGSIA+KA+KR+DFPLTHW RAQI +MNRT G LGVAN IR + LP L+ A K + R+N + + T Q++ + RY K S A+ K N + G G ++SVR K ++I+G G +G G T GK R+ A +YTAAGS++ KN + + R G + ++RVC+ C A VG +FLA+++H RKG+ IC
Sbjct: 4 IAAARQISEAEKAFRQAIGTTLFVQVMGSSQIEKSSVRHQAWGESRDWAFFSHCCNSLGGNIRSTHPCGPCDSHTAFAVACIRSTAFMPDLGTQFLESVNGSIASKASKRNDFPLTHWPRAQIAVMNRTLRCGTLGVANLIREELRLPILSAPAAKVVSDHERKNTRVSLTGEYQTDDQKKQRTADRYTTKADKSRLIAVWKGLSAADVAENEIHPSGFGAVDLASVRGKFDAITGDDKGPGKDGRAQDGGTAGGKGKGSRKRSAALACLPDYTAAGSDTSKNAIVLADVRTGGK-KARVCAECTAAGVGLQFLADKQHQRKGQKIC 329
BLAST of mRNA_P-littoralis_Contig1128.8.1 vs. uniprot
Match: A0A6H5JHD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHD0_9PHAE) HSP 1 Score: 206 bits (524), Expect = 2.710e-60 Identity = 121/239 (50.63%), Postives = 153/239 (64.02%), Query Frame = 1
Query: 601 MTDLGTNHLESMNGSIAAKATKRSDFPLTHWARAQIGIMNRTSPDGALGVANRIRHKAELPPLTGTAGKKMEAQSRRNAGTVVGQAFLTPQQRQANSTARYKKKDKVSARTALHKQNHDRRATANPLKAFGHGTHGVSSVRDKLESISGVAYAGGGEGCEGIGSTPSAGKRKRRGRATSEETTEYTAAGSNSEKNNELASARRMGARTESRVCSACVFARVGREFLAERKHARKGKTIC 1317
M LGTN LESMNG+IAAKATKRSDF THW+RAQI +MNRT DG +GVAN +R LPPLT A +KMEA+ RR VVGQ T +QR ST RYK KD+V+ +TA +K NHD+RA N + +G+GTHGV+++R KL + G G +G G S R+ A EY A GSN++ N++LA+ RMG VCS+C+ A VGR+FL + +HARKG IC
Sbjct: 1 MYGLGTNFLESMNGTIAAKATKRSDFNRTHWSRAQIAMMNRTHDDGPVGVANLVRSHMGLPPLTNRAAEKMEARDRRGKKVVVGQLHRTEEQRTKASTDRYKNKDRVTTQTAANKANHDKRAKENKILPYGYGTHGVAALRKKL-AAEGEDVEGTADGESGRTSXXXXXXXXRK-EAGGTAIPEYNAGGSNTDNNDKLAADVRMGGTKTGGVCSSCLEAGVGRQFLVDAQHARKGAKIC 237
BLAST of mRNA_P-littoralis_Contig1128.8.1 vs. uniprot
Match: A0A6H5L2W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W2_9PHAE) HSP 1 Score: 166 bits (420), Expect = 7.370e-41 Identity = 138/420 (32.86%), Postives = 176/420 (41.90%), Query Frame = 1
Query: 184 MTKKEARSTEVPLHGMEGPWEPPNQDPDQISACDGPARLVVIPAVQERKKEYIQASARVITAEKEFRAETGTTLKVQVAGSSQIEMSSVRHQALGESRPWSFFSHCCNGLGGNIRSVQRCAVCDSHTTILTTCIRAPSFMTDLGTNHLESMNGSIAAKATKRSDFPLTHWARAQIGIMNRTSPDGALGVANRIRHKAELPPLTGTAGKKMEAQSRRNAGTVVGQAFLTPQQRQANSTARYKKKDKVSARTALHKQNHDRRATANPLKAFGHGTHGVSSVRDKLESISG--------------------------------------VAYAGGGEGCEGIGSTPSAGKRKRRGRATSEETT----EYTAAGSNSEKNNELASARRMGARTESRVCSACVFARVGREFLAERKHARKGKTIC 1317
+TKKE ++ VPL + G W+PP D ++ S DGPARLVV+PA+Q C CDSH CIRAP+FM DLGT LES+NGSIAAKATKR DFP+TH+ RAQI +MNRT P GA VAN IR + LP LT A K + +N +T +++ + +Y + S A+ K + A N + G G V SVR+ L++ISG GGE EG G+ GK + T E+TAAGSN+EKN + S RMGA C+AC A VG EFLA + H+RKG C
Sbjct: 1067 LTKKERKAKVVPLTTVRGEWKPP-ADAEEDSPYDGPARLVVVPALQP------------------------------------------------------------------------CGTCDSHVAFSVACIRAPAFMPDLGTQFLESVNGSIAAKATKRCDFPVTHYPRAQIAVMNRTLPGGAEEVANLIREEMALPRLTPPAAKVISDNDVKNTRLNARGDSMTGDEKKQRTDDKYATRADKSHLIAVWKGISSKDAANNEIDPSGFGLVDVGSVRETLDAISGDKEPEKAPAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEAKEG-GAIGGKGKXXXXXXXXXKSATDVMLEHTAAGSNTEKNANVLSDVRMGAGKTKGTCAACRAAGVGLEFLARKSHSRKGAAKC 1412
BLAST of mRNA_P-littoralis_Contig1128.8.1 vs. uniprot
Match: A0A6H5KX32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX32_9PHAE) HSP 1 Score: 129 bits (324), Expect = 1.750e-28 Identity = 105/346 (30.35%), Postives = 157/346 (45.38%), Query Frame = 1
Query: 289 PARLVVIPAVQERKKEYIQASARVITAEKEFRAETGTTLKVQVAGSSQIEMSSVRHQALGESRPWSFFSHCCNGLGGNIRSVQRCAVCDSHTTILTTCIRAPSFMTDLGTNHLESMNGSIAAKATKRSDFPLTHWARAQIGIMNRTSPDGALGVANRIRHKAELPPLTGTAGKKMEAQSRRNAGTVVGQAFLTPQQRQANSTARYKKKDKVSARTALHKQNHDRRATANPLKAFGHGTHGVSSVRDKLESISGVAYAGGGEGCEGIGSTPSAGKRKRRGRATSEETTEYTAAGSNSEKN-NE--LASARRMGARTESRVCSACVFARVGREFLAERKHARKGKTIC 1317
PA LV+ ++ Y++A +V E TG + V + Q ++RH A ES PW+FFS C N G N+ + ++C C + T C+RA SF +GTN LES NGS+AA +KRSDF ++H RAQ+ ++ R P G V RIR LPPLT A ++ R+ G + + S ++ K+K + S L HG + + +K ++ E + +G A R + G A + Y GSN+ +N NE +A A+R + S C C V +LA+R+H+R KT C
Sbjct: 418 PAALVLTTRIKALMVRYVEAVVQVAKEEAAVFVMTGVRIMVVSSHLGQDNTGTLRHMAWRESGPWTFFSPCANEAGVNMSTKRKCPACAEQVLVNTACLRAFSFCLVIGTNALESFNGSVAAMVSKRSDFYISHVGRAQLALLKRCFPGGYREVVRRIRKACGLPPLTNRAEEETLVHQRKARHLEAGHEVWSSAAVRVGSDSKLKRKHRRS------------------LVQTKHGAE-LKAANEKSQA----------ELYKSVGEDKRA--RAKGGDAGANGLLSYDRGGSNASRNLNEGMVAPAKR---KRTSGACKECGKFGVPAFWLAQRQHSRAAKTRC 729
BLAST of mRNA_P-littoralis_Contig1128.8.1 vs. uniprot
Match: A0A6H5JYT6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT6_9PHAE) HSP 1 Score: 125 bits (315), Expect = 8.600e-28 Identity = 74/212 (34.91%), Postives = 108/212 (50.94%), Query Frame = 1
Query: 289 PARLVVIPAVQERKKEYIQASARVITAEKEFRAETGTTLKVQVAGSSQIEMSSVRHQALGESRPWSFFSHCCNGLGGNIRSVQRCAVCDSHTTILTTCIRAPSFMTDLGTNHLESMNGSIAAKATKRSDFPLTHWARAQIGIMNRTSPDGALGVANRIRHKAELPPLTGTAGKKMEAQSRRNAGTVVGQAFLTPQQRQANSTARYKKKDKVS 924
PA LV+ ++ Y++A +V E TG + V + Q ++RH A ES PW+FFS C N G N+ + ++C C + T C+RA SF +GTN LES NGS+AA +KRSDF ++H RAQ+ ++ R P G V RIR LPPLT A ++ R+ G + +A S ++ K+K + S
Sbjct: 276 PAALVLTTRIKALMVRYVEAVVQVAKEETAVFVMTGLRIMVVSSLLGQGNTGTLRHMAWRESGPWTFFSPCANEAGVNMSTKRKCPACAEQVLVNTACLRAFSFCLVIGTNALESFNGSVAAMVSKRSDFYISHVGRAQLALLKRCFPGGYREVVRRIRKACGLPPLTNRAEEETLVHQRKARHLKAGHEVWSSAAVRAGSDSKLKRKHRRS 487
BLAST of mRNA_P-littoralis_Contig1128.8.1 vs. uniprot
Match: A0A6H5KGM5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGM5_9PHAE) HSP 1 Score: 114 bits (286), Expect = 9.130e-27 Identity = 59/137 (43.07%), Postives = 78/137 (56.93%), Query Frame = 1
Query: 391 TGTTLKVQVAGSSQIEMSSVRHQALGESRPWSFFSHCCNGLGGNIRSVQRCAVCDSHTTILTTCIRAPSFMTDLGTNHLESMNGSIAAKATKRSDFPLTHWARAQIGIMNRTSPDGALGVANRIRHKAELPPLTGTA 801
TG + V + Q ++RH A ES PW+FFS C N G N+ + ++C C + T C+RA SF +GTN LES NGS+AA +KRSDF ++H RAQ+ ++ R P G V RIR LPPLT A
Sbjct: 2 TGVRIMVVSSHLGQDNTGTLRHMAWRESGPWTFFSPCANEAGVNMSTKRKCPACAVQVLVNTACLRAFSFCLVIGTNALESFNGSVAAMVSKRSDFYISHVGRAQLALLKRCFPGGYREVVRRIRKACGLPPLTNRA 138
BLAST of mRNA_P-littoralis_Contig1128.8.1 vs. uniprot
Match: A0A6H5JHR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR1_9PHAE) HSP 1 Score: 111 bits (278), Expect = 8.260e-23 Identity = 63/137 (45.99%), Postives = 83/137 (60.58%), Query Frame = 1
Query: 28 GESTALSEEGLRLLTVLEAAVRATLSAAEQVMEAASQARIEVEVICAPIYAQMTKKEARSTEVPLHGMEGPWEPPNQDPDQISACDGPARLVVIPAVQERKKEYIQASARVITAEKEFRAETGTTLKVQVAGSSQIE 438
G + +LS+ G +L AV AA +V + A R ++E CA ++ M++KE R+T+VPL G+ GPWEP + S CDGPARLV +Q RK+ YI ASA V+ AE+ FR ETG TL V V GSSQ E
Sbjct: 431 GGAESLSDRGKAMLDSFYQAVMDATGAARRVSDVADSTRADLERACAGVHGHMSEKEKRTTQVPLAGIPGPWEPARTEEGYTSPCDGPARLVQTREIQGRKEAYIGASAAVLEAERIFRKETGRTLTVSVVGSSQRE 567
BLAST of mRNA_P-littoralis_Contig1128.8.1 vs. uniprot
Match: A0A6H5JU55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU55_9PHAE) HSP 1 Score: 111 bits (278), Expect = 1.640e-22 Identity = 63/137 (45.99%), Postives = 83/137 (60.58%), Query Frame = 1
Query: 28 GESTALSEEGLRLLTVLEAAVRATLSAAEQVMEAASQARIEVEVICAPIYAQMTKKEARSTEVPLHGMEGPWEPPNQDPDQISACDGPARLVVIPAVQERKKEYIQASARVITAEKEFRAETGTTLKVQVAGSSQIE 438
G + +LS+ G +L AV AA +V + A R ++E CA ++ M++KE R+T+VPL G+ GPWEP + S CDGPARLV +Q RK+ YI ASA V+ AE+ FR ETG TL V V GSSQ E
Sbjct: 1098 GGAESLSDRGKAMLDSFYQAVMDATGAARRVSDVADSTRADLERACAGVHGHMSEKEKRTTQVPLAGIPGPWEPARTEEGYTSPCDGPARLVQTREIQGRKEAYIGASAAVLEAERIFRKETGRTLTVSVVGSSQRE 1234 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1128.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1128.8.1 >prot_P-littoralis_Contig1128.8.1 ID=prot_P-littoralis_Contig1128.8.1|Name=mRNA_P-littoralis_Contig1128.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=441bp SRLLAPETEGESTALSEEGLRLLTVLEAAVRATLSAAEQVMEAASQARIEback to top mRNA from alignment at P-littoralis_Contig1128:22580..24862- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1128.8.1 ID=mRNA_P-littoralis_Contig1128.8.1|Name=mRNA_P-littoralis_Contig1128.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2283bp|location=Sequence derived from alignment at P-littoralis_Contig1128:22580..24862- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1128:22580..24862- >mRNA_P-littoralis_Contig1128.8.1 ID=mRNA_P-littoralis_Contig1128.8.1|Name=mRNA_P-littoralis_Contig1128.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1323bp|location=Sequence derived from alignment at P-littoralis_Contig1128:22580..24862- (Pylaiella littoralis U1_48)back to top |