prot_P-littoralis_Contig112.128.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig112.128.1
Unique Nameprot_P-littoralis_Contig112.128.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length63
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig112.128.1 vs. uniprot
Match: A0A6H5KUZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUZ3_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 3.160e-32
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0 
Query:    1 KDCLIIGDEGNGIGEGELQALHHAYLVGRTASPLTGEGGGSSSENNQEGQGETPPVRVEVVSI 63
            KD LIIGDEGNGIGEGELQALHHAYLVGRTA PLTGEGGGSSSENNQEGQGETPPVRVEVVSI
Sbjct:  231 KDSLIIGDEGNGIGEGELQALHHAYLVGRTAGPLTGEGGGSSSENNQEGQGETPPVRVEVVSI 293
[Close]
BLAST of mRNA_P-littoralis_Contig112.128.1 vs. uniprot
Match: A0A6H5KRV8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV8_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 1.080e-6
Identity = 33/67 (49.25%), Postives = 39/67 (58.21%), Query Frame = 0 
Query:    1 KDCLIIGDEGNGIGEGELQALHHAYLVGRTASPLTGEGGGSSSENNQEGQGETP----PVRVEVVSI 63
            K+  II  E NGIGEGELQALHHAY+ G+      G+GG       +EG    P    PV VEVVS+
Sbjct:  845 KELDIILLEANGIGEGELQALHHAYMTGKNNKESRGQGG-----EVREGGVVVPTSEDPVTVEVVSV 906
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig112.128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUZ3_9PHAE3.160e-3296.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRV8_9PHAE1.080e-649.25Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig112contigP-littoralis_Contig112:506884..507072 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig112.128.1mRNA_P-littoralis_Contig112.128.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig112 506883..507072 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig112.128.1 ID=prot_P-littoralis_Contig112.128.1|Name=mRNA_P-littoralis_Contig112.128.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=63bp
KDCLIIGDEGNGIGEGELQALHHAYLVGRTASPLTGEGGGSSSENNQEGQ
GETPPVRVEVVSI
back to top