mRNA_P-littoralis_Contig112.121.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig112.121.2 vs. uniprot
Match: D7G0Y0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y0_ECTSI) HSP 1 Score: 167 bits (422), Expect = 1.190e-50 Identity = 82/92 (89.13%), Postives = 85/92 (92.39%), Query Frame = 1
Query: 10 APEPPTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRLTSEVLTNDVSSGRPADTNLDASLESCPEDFLAANSGKRP 285
APEP THL+RRWLDRYCTSPEA+DA LGAV ITGCVLDMCGGPTDAVATRLR T E+LTNDVSSGRPADTNLDASLES PEDFLAA SGKRP
Sbjct: 15 APEPQTHLRRRWLDRYCTSPEAMDASLGAVDITGCVLDMCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLDASLESFPEDFLAAYSGKRP 106
BLAST of mRNA_P-littoralis_Contig112.121.2 vs. uniprot
Match: A0A6H5KD58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD58_9PHAE) HSP 1 Score: 162 bits (411), Expect = 1.240e-48 Identity = 79/91 (86.81%), Postives = 84/91 (92.31%), Query Frame = 1
Query: 13 PEPPTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRLTSEVLTNDVSSGRPADTNLDASLESCPEDFLAANSGKRP 285
PEP THLKRRWLDRYCTSPEAV+ALLGAV ITGC+LD+CGGPTDAVATRL T EVLTNDVSSGRPADTNLDASLES P+DF AA+SGKRP
Sbjct: 82 PEPQTHLKRRWLDRYCTSPEAVEALLGAVSITGCILDVCGGPTDAVATRLGPTCEVLTNDVSSGRPADTNLDASLESFPDDFFAASSGKRP 172
BLAST of mRNA_P-littoralis_Contig112.121.2 vs. uniprot
Match: A0A6H5K8H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8H6_9PHAE) HSP 1 Score: 162 bits (410), Expect = 3.380e-48 Identity = 79/91 (86.81%), Postives = 83/91 (91.21%), Query Frame = 1
Query: 13 PEPPTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRLTSEVLTNDVSSGRPADTNLDASLESCPEDFLAANSGKRP 285
PEP THLKRRWLDRYCTSPEAV+ALLGAV ITGC+LDMCGGPTDAVATRLR T EV T DVSSGRPADTNLDASLES P+DF+AA SGKRP
Sbjct: 153 PEPQTHLKRRWLDRYCTSPEAVEALLGAVSITGCILDMCGGPTDAVATRLRPTCEVFTKDVSSGRPADTNLDASLESLPDDFVAACSGKRP 243
BLAST of mRNA_P-littoralis_Contig112.121.2 vs. uniprot
Match: A0A6H5KNW7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNW7_9PHAE) HSP 1 Score: 135 bits (341), Expect = 1.080e-38 Identity = 64/68 (94.12%), Postives = 64/68 (94.12%), Query Frame = 1
Query: 1 WVGAPEPPTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRLTSEVLTNDVSSG 204
WVGAPEP THLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLR T EVLTND SSG
Sbjct: 105 WVGAPEPQTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRSTCEVLTNDASSG 172
BLAST of mRNA_P-littoralis_Contig112.121.2 vs. uniprot
Match: D7FJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU4_ECTSI) HSP 1 Score: 130 bits (328), Expect = 3.630e-36 Identity = 66/100 (66.00%), Postives = 75/100 (75.00%), Query Frame = 1
Query: 1 WVGAPEPPTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRLTSEVLTNDVSS-----GRPADTNLDASLESCPEDFLAANSGKRP 285
W G PEP H+KRR LDRYCTSPEAV+ALLGAV + GCVLDMCGGP DA+ATRL T +V+TND+S+ G P DTNLDASL S DFL A G+RP
Sbjct: 65 WTGIPEPRKHIKRRCLDRYCTSPEAVEALLGAVELEGCVLDMCGGPGDAIATRLGATCKVVTNDISTRLSPGGLPPDTNLDASLASFAVDFLLAKPGQRP 164
BLAST of mRNA_P-littoralis_Contig112.121.2 vs. uniprot
Match: D8LPP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP0_ECTSI) HSP 1 Score: 120 bits (302), Expect = 5.410e-34 Identity = 57/67 (85.07%), Postives = 59/67 (88.06%), Query Frame = 1
Query: 1 WVGAPEPPTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRLTSEVLTNDVSS 201
W AP P THL+RRWLDRYCTSPEAVDALLGAV ITGCVLDMCGGPTDAVATRLR E+LTNDVSS
Sbjct: 2 WRTAPAPQTHLRRRWLDRYCTSPEAVDALLGAVDITGCVLDMCGGPTDAVATRLRSACEILTNDVSS 68
BLAST of mRNA_P-littoralis_Contig112.121.2 vs. uniprot
Match: A0A6H5JAW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW8_9PHAE) HSP 1 Score: 117 bits (293), Expect = 1.700e-32 Identity = 57/68 (83.82%), Postives = 58/68 (85.29%), Query Frame = 1
Query: 1 WVGAPEPPTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRLTSEVLTNDVSSG 204
W APEP HLKRR LDRYCTSPEAVDALLG+V ITGCV DMCGGPTDAVA RLR T EVLTNDVSSG
Sbjct: 22 WKSAPEPEIHLKRRLLDRYCTSPEAVDALLGSVDITGCVSDMCGGPTDAVAARLRSTCEVLTNDVSSG 89
BLAST of mRNA_P-littoralis_Contig112.121.2 vs. uniprot
Match: A0A6H5KZK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZK3_9PHAE) HSP 1 Score: 119 bits (297), Expect = 2.280e-32 Identity = 64/95 (67.37%), Postives = 67/95 (70.53%), Query Frame = 1
Query: 1 WVGAPEPPTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRLTSEVLTNDVSSGRPADTNLDASLESCPEDFLAANSGKRP 285
W APEP TH KRR LDRYCTSP AVDAL AV I GCVLDMCGGP AVA T EVLTNDV S D+NLDASL S P DFL A+ GK+P
Sbjct: 45 WSAAPEPVTHDKRRRLDRYCTSPGAVDALRDAVDIMGCVLDMCGGPEAAVALGFGGTCEVLTNDVGSRLSPDSNLDASLLSFPSDFLKAHPGKQP 139
BLAST of mRNA_P-littoralis_Contig112.121.2 vs. uniprot
Match: A0A6H5JUK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK3_9PHAE) HSP 1 Score: 121 bits (303), Expect = 1.390e-31 Identity = 64/95 (67.37%), Postives = 68/95 (71.58%), Query Frame = 1
Query: 1 WVGAPEPPTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRLTSEVLTNDVSSGRPADTNLDASLESCPEDFLAANSGKRP 285
W APEP TH KRR LDRYCT PEAV+ L AV I GCVLDMCGGP DAVA R T EVLTNDVSS A TNLDASL S ++F AN GK+P
Sbjct: 111 WSAAPEPVTHDKRRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSSRLSAGTNLDASLLSFRDNFRKANPGKQP 205
BLAST of mRNA_P-littoralis_Contig112.121.2 vs. uniprot
Match: A0A6H5K049_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K049_9PHAE) HSP 1 Score: 115 bits (287), Expect = 6.460e-30 Identity = 59/95 (62.11%), Postives = 68/95 (71.58%), Query Frame = 1
Query: 1 WVGAPEPPTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRLTSEVLTNDVSSGRPADTNLDASLESCPEDFLAANSGKRP 285
W APEP LKRR +DRYCTSP ++ALLG V I+GCVLDMCGG DAVA RLR T +VLTNDV TNLDAS S +DFLAA+ G++P
Sbjct: 53 WTCAPEPVKQLKRRCVDRYCTSPATLEALLGVVSISGCVLDMCGGTDDAVAIRLRDTCQVLTNDVGPRLSPATNLDASSASFTDDFLAAHHGQQP 147 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig112.121.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig112.121.2 >prot_P-littoralis_Contig112.121.2 ID=prot_P-littoralis_Contig112.121.2|Name=mRNA_P-littoralis_Contig112.121.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=95bp WVGAPEPPTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVback to top mRNA from alignment at P-littoralis_Contig112:504023..504947+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig112.121.2 ID=mRNA_P-littoralis_Contig112.121.2|Name=mRNA_P-littoralis_Contig112.121.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=925bp|location=Sequence derived from alignment at P-littoralis_Contig112:504023..504947+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig112:504023..504947+ >mRNA_P-littoralis_Contig112.121.2 ID=mRNA_P-littoralis_Contig112.121.2|Name=mRNA_P-littoralis_Contig112.121.2|organism=Pylaiella littoralis U1_48|type=CDS|length=285bp|location=Sequence derived from alignment at P-littoralis_Contig112:504023..504947+ (Pylaiella littoralis U1_48)back to top |