mRNA_P-littoralis_Contig112.111.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig112.111.1 vs. uniprot
Match: D7G0S7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0S7_ECTSI) HSP 1 Score: 365 bits (937), Expect = 1.870e-118 Identity = 170/226 (75.22%), Postives = 193/226 (85.40%), Query Frame = 1
Query: 637 ENTLPDVQGRDWRLFRKNLISQYGEDNGKDPWSESCWAHDIGIVEPGSLLIATEEIEGGIFRQSVIIILSHHRDEGTLGLIINHPGPQRLHSLPAIQKDLAEVFGDSQVFDGGPMGLGTMTVLHDAEVEGCDAVLKG-VYTGGFESLIEATRQGRVSKDHVRFVHGHAAWSPGQLQEELDSNQWFLAAAAPELMTGDCDEPLNPLWGKLLGLMGGTYQEVAKRNAP 1311
++ L +V+GRDWRLFRKNLI++YGED GKDPWS+ CWAHDIG VE G LLIATEEI+ G F QSVI++LSH RD+GTLGLI+N PGPQRL SLP +Q DLAEVFGDSQVFDGGPMGLGTMTVLHDA VEG D VL G V+ GGF++L++ TRQG VSKD VRFVHGH+AWSPGQLQ ELD NQWF+AAAAPEL+T CD+P +PLW KLL LMGG YQEVAKRN P
Sbjct: 84 DDLLSEVKGRDWRLFRKNLITRYGEDIGKDPWSDGCWAHDIGTVEAGCLLIATEEIDSGTFHQSVILVLSHARDQGTLGLILNRPGPQRLRSLPGLQPDLAEVFGDSQVFDGGPMGLGTMTVLHDANVEGSDPVLDGGVFAGGFDTLVDVTRQGTVSKDRVRFVHGHSAWSPGQLQGELDHNQWFVAAAAPELITEHCDKPFHPLWTKLLRLMGGKYQEVAKRNEP 309
BLAST of mRNA_P-littoralis_Contig112.111.1 vs. uniprot
Match: A0A836CNM8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNM8_9STRA) HSP 1 Score: 209 bits (532), Expect = 5.860e-59 Identity = 102/244 (41.80%), Postives = 146/244 (59.84%), Query Frame = 1
Query: 613 MEESGAAEENTLPDVQGRDWRLFRKNLISQYGEDN---------GKDPWSESCWAHDIGIVEPGSLLIATEEIEGGIFRQSVIIILSHHRDEGTLGLIINHPGPQRLHSLPAIQKDLAEVFGDSQVFDGGPMGLGTMTVLHDA-EVEGCDAVLKGVYTGGFESLIEATRQGRVSKDHVRFVHGHAAWSPGQLQEELDSNQWFLAAAAPELMTGDCDEPLNP--LWGKLLGLMGGTYQEVAKRNA 1308
M G E + +PDV+ DWR FR NL+ + E+ + W + WAH+IG+VE G +L+A E ++G +F Q+ +++L H + GTLGLI+N P +R+ +P + +D+ FG V GGP+G G MT LH + G + G+Y GGFE L+ ++GRV +R HGHAAW PGQL EL ++ W+LAAAAP L+TG P +W +LL LMGG+Y EVA+RN+
Sbjct: 38 MSAHGDEELDVIPDVKQLDWRAFRANLVRRSREEGFGGSSAXXXARRKWRDDAWAHEIGVVEKGCVLLAHETLQG-VFHQTAVLVLDHDDNAGTLGLILNRPTKRRIAGVPGLGRDMQAAFGQCAVHYGGPVGAGGMTALHGVKQARGGQEIAPGLYVGGFEDLVRLAQEGRVDGSSLRLAHGHAAWGPGQLSRELRADFWYLAAAAPALVTGAGAAGRAPSRMWHQLLDLMGGSYAEVARRNS 280
BLAST of mRNA_P-littoralis_Contig112.111.1 vs. uniprot
Match: A0A7S2Y026_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y026_9STRA) HSP 1 Score: 196 bits (498), Expect = 5.200e-54 Identity = 98/232 (42.24%), Postives = 142/232 (61.21%), Query Frame = 1
Query: 625 GAAEE----NTLPDVQGRDWRLFRKNLISQYGEDNGKDPWSESCWAHDIGIVEPGSLLIATEEIEGGIFRQSVIIILSHHRDEGTLGLIINHPGPQRLHSLPAIQKDLAEVFGDSQVFDGGPMGLGTMTVLHDAE-VEGCDAVLKGVYTGGFESLIEATRQGRVSKDHVRFVHGHAAWSPGQLQEELDSNQWFLAAAAPELMTGDCDEPLNPLWGKLLGLMGGTYQEVAKRN 1305
GAA+E T+ DV DWR FR L++QY ++ W+E WAHDIG +E G LL+A++ ++ F QSVI++L+H D GT G+++N P + ++ I L E FG++ ++ GGPMGL + V+H E VEG + KG+Y GG L E QG++ VRF GHAAW+PGQL++E++ W+ A +PEL+ C PLW ++L LMGG Y E+ K+N
Sbjct: 52 GAADEAGDSETINDVGNVDWRDFRAKLVAQYSGKE-RENWTEDRWAHDIGQIENGCLLLASDVMDDDTFWQSVILVLNHDPDNGTFGIVLNRPTGAHVCNVRDIVPALREAFGEAPLYLGGPMGLDEVNVVHAVEGVEGAIEIRKGLYHGGVAGLQERAEQGQLDLAKVRFEAGHAAWNPGQLEQEIEKGWWYPAVCSPELVVRPCIGLPVPLWCQILDLMGGEYAEIGKKN 282
BLAST of mRNA_P-littoralis_Contig112.111.1 vs. uniprot
Match: A0A835Z6U1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6U1_9STRA) HSP 1 Score: 167 bits (422), Expect = 4.280e-42 Identity = 113/345 (32.75%), Postives = 153/345 (44.35%), Query Frame = 1
Query: 613 MEESGAAEEN---TLPDVQGRDWRLFRKNLISQYGEDNGKDP---WSESCWAHDIGIVEPGSLLIATEEIEGGIFRQSVIIILSHHRDEGTLGLIINHPGPQRLHSLPAIQKDLAEVFGDSQVFDGGPMGLGTMTVLHDA-EVEGCDAVLKGVYTGGFESLI----EAT--------------------------------RQGRVSKDHVRFVHGHAAWSPGQ---------------------LQEELDSNQWFLAAAAPELMTGDCD--EPLNPLWGKL-----------------------------------------------LGLMGGTYQEVAKRNA 1308
M G A+ + T+PDV+ +DWR FR NL+ + E+ P WS WAHDIG VE G +L+A E +EG +F Q+V++IL H GTLGLIIN P +R+ +P + +D+ FGD V GGP+G G MT LH A E +GC V VY GG E L+ EAT ++G +R GHAAW PGQ L+ EL +N W++A+AAPEL+TG + + +W +L LGLMGG + +VA+RNA
Sbjct: 45 MSSGGGADPSDLDTIPDVKSKDWRAFRANLVRRSAEEGFGAPHRGWSGGKWAHDIGCVEKGCVLLAHESLEG-VFYQTVVLILDHDDTRGTLGLIINRPTKKRIAGVPGLGRDVQRAFGDCPVLYGGPVGAGGMTALHSAGEAKGCQEVAPSVYVGGLEGLVRLAQEATPWSVVRRIAALLWRRLVNLGGKGRALRSGGVAQRGHAHGSTLRLAVGHAAWVPGQEKETASNTQAPAPLGAERLRHLKRELRANFWYVASAAPELITGPFTSAKQTSSMWHQLVLHFFELGFHGLYRRMRLSLRAGFARTRIQRVRRPGSLMRGGHASLILGLMGGEFADVAQRNA 388
BLAST of mRNA_P-littoralis_Contig112.111.1 vs. uniprot
Match: A0A1Y1HP74_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HP74_KLENI) HSP 1 Score: 145 bits (367), Expect = 5.100e-35 Identity = 84/254 (33.07%), Postives = 135/254 (53.15%), Query Frame = 1
Query: 622 SGAAEENTLPDVQGRDWRLFRKNLISQYGEDNGKDPWSESC------------------WAHDIGIVEPGSLLIATEEIEGGIFRQS------VIIILSHHRDEGTLGLIINHPGPQRLHSLPAIQKDLAEVFGDSQVFDGGPMGLGTMTVLH-DAEVEGCDAVLKGVYTGGFESLIEATRQGRVSKDHVRFVHGHAAWSPGQLQEELDSNQWFLAAAAPELMTGDCDEPLNPLWGKLLGLMGGTYQEVAKRNA 1308
SG+ ++++ P DWR FR L+++ + + E WAH + + E G+L+IA + G F Q+ +I+L HH +EG++G+I+N P L +L L+ +++ GG +G G VLH ++++G V++GVYTGGFE++ E R G+ D R+ H +A W PGQL+ E+ + WFL + + +L+ ++ PLW ++L LMGGTY EVAKR A
Sbjct: 87 SGSGDDDS-PTAAEIDWREFRARLVARSAAEAAERAREEQLESDAAEDRAVPEIQPGGSWAHPLVLPEVGALVIA----KPGYFNQNQQYFNHAVILLLHHGEEGSMGIILNKPTEHTLGTLFEGIDTLSPELASGRLYLGGDVGHGATHVLHRHSDLDGTRKVVEGVYTGGFEAIGEHIRAGKSECDDYRWFHMYAGWGPGQLENEVKAGVWFLGSCSRDLLLTHSEDLKTPLWDEVLQLMGGTYAEVAKRRA 335
BLAST of mRNA_P-littoralis_Contig112.111.1 vs. uniprot
Match: A0A6S8JKM4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8JKM4_9STRA) HSP 1 Score: 143 bits (361), Expect = 9.130e-34 Identity = 77/202 (38.12%), Postives = 113/202 (55.94%), Query Frame = 1
Query: 733 SESCWAHDIGIVEPGSLLIATEEIEGGIFRQSVIIILSHHRDEGTLGLIINHPGP---QRLHSLPAIQKDLA--EVFGDSQVFDGGPMGLGTMTVLHD-AEVEGCDAVLKGVYTGGFESLIEATRQGRVSKDHVRFVHGHAAWSPGQLQEELDSNQWFLAAAAPELMTGDCDEPL------NPLWGKLLGLMGGTYQEVAKR 1302
S+ WAH+I +EPG +L+A E++ GG+F Q+V++I+ HH GT G++IN P ++ S P + DL+ F ++V GGP+ ++LH EVEG + GVY GG E L+ R R H FV GHAAW PGQLQ E++ W+ AA + +L+ P+ N LW ++ MG Y ++AKR
Sbjct: 175 SKHRWAHEIPNIEPGCVLLANEKL-GGVFHQTVVLIIEHHETTGTFGVVINRPMEGDLSKVGSEPGSKLDLSLKMAFSKARVTYGGPVLKEEFSILHSFGEVEGARKLCPGVYIGGSEELMNEVRINRFDPRHALFVKGHAAWVPGQLQREINKGVWYTAAVSADLVLRYAGAPVTAEDNPNDLWSDIMTCMGEPYTDIAKR 375
BLAST of mRNA_P-littoralis_Contig112.111.1 vs. uniprot
Match: R7QN66_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN66_CHOCR) HSP 1 Score: 138 bits (348), Expect = 3.850e-33 Identity = 78/218 (35.78%), Postives = 120/218 (55.05%), Query Frame = 1
Query: 667 DWRLFRKNLISQYGEDNGKDPWSESCWAHDIGIVEPGSLLIATEEIEGG-----IFRQSVIIILSHHRDEGTLGLIINHPGPQRLHSLPAIQKDLAEVFGDSQVFDGGPMGLGTMTVLH-DAEVEGCDAVLKGVYTGGFESLIEATRQGRVSKDHVRFVHGHAAWSPGQLQEELDSNQWFLAAAAPELMTGDCDEPLNPLWGKLLGLMGGTYQEVAKR 1302
DWR FR L+ S WAH++ VE G LLIA+ E G F SV+++L+HH D+GT+G+I+N P + S P ++ ++ + ++ GGP+ L ++ LH DA + G V+ GV T G ++ +G+++ D RF G++ WSPGQLQEE+DS W+ A+ EL+T + L KLL LMGG + ++ +R
Sbjct: 42 DWRSFRARLVQTEQTTTPAGEPSTKEWAHEVPFVEAGCLLIASPEHFVGEHSCSFFANSVVLVLTHHSDKGTVGVILNRPVAAAV-SEPRLRGAVSAA--PAPLYLGGPVALDSLLALHNDASIPGAGQVVDGVATSGVAEVLSRIERGQMNVDSCRFFCGYSGWSPGQLQEEVDSGVWYTCASCTELVTEKGLHRDDYLTKKLLKLMGGRFTQIGER 256
BLAST of mRNA_P-littoralis_Contig112.111.1 vs. uniprot
Match: B7G677_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G677_PHATC) HSP 1 Score: 139 bits (351), Expect = 2.270e-32 Identity = 74/199 (37.19%), Postives = 108/199 (54.27%), Query Frame = 1
Query: 745 WAHDIGIVEPGSLLIATEEIEGGIFRQSVIIILSHHRDEGTLGLIINHPGPQRLHSLPAIQKDLAEV-----FGDSQVFDGGPMGLGTMTVLHD-AEVEGCDAVLKGVYTGGFESLIEATRQGRVSKDHVRFVHGHAAWSPGQLQEELDSNQWFLAAAAPELMTGDCDEPL------NPLWGKLLGLMGGTYQEVAKRN 1305
WAH+I VEPG +LIA E++ GG+F Q+V++I+ HH G+ G++IN P L + + Q+ ++ F ++V GGP+ +VLH EVEG + GVY GG E L+ R R H FV GHA W PGQL E+ W+ AAA+ + + P+ N LW +L MGG Y ++A ++
Sbjct: 186 WAHEISHVEPGCVLIANEKL-GGVFHQTVVLIIDHHETTGSTGIVINRPMDGDLLKIASEQESSLDLSLKLAFSQARVTYGGPVLTDEFSVLHGFGEVEGSRKLCPGVYIGGSEELMNEVRTLRFDPAHALFVKGHAGWVPGQLTREISKGVWYTAAASSDFILRYAGAPVTEDDNANDLWADILSCMGGNYAKIAGKH 383
BLAST of mRNA_P-littoralis_Contig112.111.1 vs. uniprot
Match: A0A7R9Z8I4_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z8I4_9STRA) HSP 1 Score: 138 bits (347), Expect = 9.850e-32 Identity = 70/200 (35.00%), Postives = 108/200 (54.00%), Query Frame = 1
Query: 745 WAHDIGIVEPGSLLIATEEIEGGIFRQSVIIILSHHRDEGTLGLIINHPGPQRLHSLPA-----IQKDLAEVFGDSQVFDGGPMGLGTMTVLHD-AEVEGCDAVLKGVYTGGFESLIEATRQGRVSKDHVRFVHGHAAWSPGQLQEELDSNQWFLAAAAPELMTGDCDEPLNP------LWGKLLGLMGGTYQEVAKRNA 1308
WAH I +EPG +L+A E + GG+F Q+V++I+ HH G+ G++IN P P +L + + + L F + V GGP+ ++LH EVEG V G++ GG E L+ R+ + +H FV GHAAW PGQL E+ W+ A+ + + + P++ LW +L MGG Y E+A ++A
Sbjct: 199 WAHPIPHIEPGCVLVANERL-GGVFHQTVVLIVDHHESAGSTGIVINRPMPGKLLKVASENPSNVNLSLKLAFNTASVTYGGPVMQEEYSILHSFGEVEGSKKVAPGLFVGGSEELMNEVRRNNFNPEHALFVKGHAAWVPGQLAREISKGVWYSASVSHDFILRYAGAPVSENDNRDDLWSDILTCMGGRYAEIAMQHA 397
BLAST of mRNA_P-littoralis_Contig112.111.1 vs. uniprot
Match: A0A1E7FAB9_9STRA (DUF179-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAB9_9STRA) HSP 1 Score: 134 bits (336), Expect = 5.530e-30 Identity = 71/203 (34.98%), Postives = 109/203 (53.69%), Query Frame = 1
Query: 727 PWSESCWAHDIGIVEPGSLLIATEEIEGGIFRQSVIIILSHHRDEGTLGLIINHPGPQRLHSLPAIQKDLAEV-----FGDSQVFDGGPMGLGTMTVLHD-AEVEGCDAVLKGVYTGGFESLIEATRQGRVSKDHVRFVHGHAAWSPGQLQEELDSNQWFLAAAAPELMTGDCDEP------LNPLWGKLLGLMGGTYQEVAK 1299
P ++ WAH+I +EPG +LIA E++ GG+F Q++I+I+ HH GT G++IN P + + + + Q+ ++ F S V GGP+ +VLH VEG + GV+ GG E L+ R R H F+ GHAAW GQL+ E+ + W++A+A+ + M P + LW +L MG Y E+ K
Sbjct: 197 PVNKHRWAHEIDHIEPGCVLIANEKL-GGVFHQTIILIVDHHEKTGTTGVVINRPFEEDVMKIASEQQTNLDISLKLAFTSSPVTYGGPVLTEDFSVLHGFGHVEGSKKIAPGVFIGGSEELMNEVRISRFDPRHALFIKGHAAWVTGQLEREIQKDVWYVASASSDFMLRYAGAPTTEEDDVEDLWVDILNCMGDNYAELPK 398 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig112.111.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig112.111.1 >prot_P-littoralis_Contig112.111.1 ID=prot_P-littoralis_Contig112.111.1|Name=mRNA_P-littoralis_Contig112.111.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=337bp MPAPNKTLRPRAPTATTSSCCCAAVLLLLGRRPTAVEGFVVFTRGGSFGIback to top mRNA from alignment at P-littoralis_Contig112:454751..465202- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig112.111.1 ID=mRNA_P-littoralis_Contig112.111.1|Name=mRNA_P-littoralis_Contig112.111.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10452bp|location=Sequence derived from alignment at P-littoralis_Contig112:454751..465202- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig112:454751..465202- >mRNA_P-littoralis_Contig112.111.1 ID=mRNA_P-littoralis_Contig112.111.1|Name=mRNA_P-littoralis_Contig112.111.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1011bp|location=Sequence derived from alignment at P-littoralis_Contig112:454751..465202- (Pylaiella littoralis U1_48)back to top |