mRNA_P-littoralis_Contig112.108.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig112.108.1 vs. uniprot
Match: A0A6H5KW09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW09_9PHAE) HSP 1 Score: 1462 bits (3784), Expect = 0.000e+0 Identity = 861/1381 (62.35%), Postives = 991/1381 (71.76%), Query Frame = 2
Query: 170 MAWWAAHLSDAKESSKTVDLDDDDDAIIDLTSDXXXXXXXXXXXXXXXXXXXXSSGSNGVEVLSP-WAVK-MTSEWSVKSEDKKRTAEASKKAEQSGEVQVTPKPPQKI-DEIENRPAKRSKWGGAGAEDDLEMVGTTGTAKLPHNRFACTEHPFTGWHGNTEHKEKCALCYCYVCDRLANDCKEWNDHCHATDSGGFKSSWKSLRQRAKPLLQAGKSPPVSGRYLANAPPPLVGVFSPTASNAAVGNGASXXXXXXXXXXXXXXXXGSRWPFSKGQSALVHDPNASLPNACNCEALCKPIHKVFRFFHQYNGFAKAGVAAVYLKGLTLEQVDHVQNISVQATVDRTIQKRVGLHTNPNTLAA------YNI-ARYDREATPIVQVKFAGVNKRDVTVAGVDPQHPAGGLMASDPFAVKWKPGDVAPHAAIAVRLGGVTNISFKMNLTLKSTSERQEYFDRFVSESPMAQSVWSSTARH-PHNDRFEAGPVMIAKVADTELLKQLKDAYEQEFVDVEAKAVYNASANVGSFSLEVILLNRLLRRGTSLQSRSGHARDVDFVPIVERVILKRTFQHPSSYSKKKGVKNLSPSFFGGSGAXXXXXXXXXXVALGREFTPSTKGYGGRSSLDVSLSGLVNSVRDEESNSNISAGAIISPAKMLLELENLQHRSLPKQPDCLTVQLFEHQKQDAQWMMDQELLQGGTMQHLWAELPQHPLAPSGPPFRSEFRRCWFSPVLNQFTLADPFTSTMKGGILCDEMGLGKTAATLCLHLIHPAKTPSPGVPLDEKEWGSIAGLQAEKLTNNAVPGIASRTEAPGTFVSKGTLVVCKVSLVGQWVEEAKRLCGGALTIYPYHGGGRRKDPEFLTKYDMVVTTYGVVQADASRNRQFPPLRRIRWWRVVLDESHTIASTSSTTKMVKELIANRRWCMTGTPYISRFSDVNGQLGFIGAEGAFKAADLGDRGANTRTQSETVAFLRRVLLRHSQGMKLGGKSILGLPSITHKVEVLTMPTKERDAYVEFEKGIQKDFCKVRYRLRNMNGSHTMEVLTLLSKFRQACSGGQLLVADSTAAGGAASGSSGTATVDAFCSICNEILESPVRTSCGHIFCQACITSMLTKTNNDQGPCPKCKTTVSLSALTLVGXXXXXXXXXXXXXGYGAKSEPREHVGGEGXXXXXXXXXX-----------SAKPGVVMETKLKALVAKLAGIHAKDPTSKSLVFSQFNSSLEWLKRTLPKKGFQFRTLTGSMSRSQRTAALTAFANDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAVGRVYRLGQARPVVVTKLVLKDSIETRILDVQKKQAQQGASSAAVGAASNTVAGNIARDNAKNLKIEEYNELFGV 4246
MAWW A + A + L+D+ + IDLTSD G++GV + S W +K M ++ VK+E KR AEAS KA+QS EVQVT KPP+ I +E+ +RPAKRSK G EDD+E+VGTTGTAKLPHNRFACTEH F G G++ HKEKC+LC+CYVCD A++C W DHCHATD+G KSSWK LRQRAK L+AGK+PP+ + AP P + GN XXXXXXXXXXXX G + P S N CNCE LCKP+H VF + N ++A V VYL GLT +QV HV++IS+Q+T+DR +QKR T +A +NI R P KRDVTVA D + A A PF W PG A +RLG V+NI FK++ T S +R+EYFDRFVS++PM +S+W T R + DR+++G V IAK D L+ ++ YE + VDVE +AV++ AN GSF++E+ILL +L+ RGTSL +RS D P+VER IL ++ P+ K ++LS S + A LGREFTPSTK GG +S+DVSLSGL+NSVRDEE+NS I G I PAKMLLELENLQHRSL KQPDCL+V+L+EHQKQDAQWMMDQE+L+GG+MQHLWAELP H LAP+ +EFRRCWFSP+LNQFT DPF STMKGGILCDEMGLGKTAATLCLHLIHP KTP+PGVPLDEKEWG I G QA LT+ + TE PG +VSKGTLVVCKVSLVGQWVEEAKRLCGGAL+IYPYHGG RRKDP FL K+D+VVTTYGVVQ DASRN FPPLRRIRWWRVVLDESHTIA+ T V+++++NRRWCMTGTPYISRFSD NGQL F+GA GAF+ +DLGD+G N TQ ETVAFLRRVL RHSQGMKLGGKSILGLPSITHKVEVL +PTKER AYV+FEKG+Q D+ VR+RLR GSHTMEVLTLLSKFRQACSGGQLLV DS G G + A+VDAFC ICN+I+ESPVRT CGHIFCQACI+S+LTK +DQGPCPKCK TV L LT VG XXXXXXXXXXXX XXXXXXXXXX S GVVMETKLKALV LAGIHAKDPTSKSLVFSQFNSSLEWLKRTLPK+GFQFRTLTGSMSR+QRTAALTAFA DPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAVGRVYRLGQ RPV VTKLVLKDSIETRIL +QKKQA +G++SAAVGA SN +AGNIARDNAKNLKI+EYN LFGV
Sbjct: 1 MAWWGALANGASTGAA---LEDNSEDPIDLTSDTEISPLP---------------GADGVGIESAAWGLKLMAAKQEVKNEGVKRAAEASAKAQQSDEVQVTDKPPEMINEEVASRPAKRSKEGD---EDDMEVVGTTGTAKLPHNRFACTEHKFDGPQGSSGHKEKCSLCFCYVCDLPASECPAWGDHCHATDAGPMKSSWKLLRQRAKAYLRAGKAPPLIASVSSMAPTPY-----------SAGNVGGXXXXXXXXXXXX------------GNVNVFVSPTVS--NDCNCEELCKPVHAVFLEM-KGNSPSQAKVPVVYLTGLTPQQVQHVEDISIQSTLDREVQKRFQRRYPGATGSALAPSGRHNILVRLASGLKPEFLTVVLPNGKRDVTVACNDRE--ASYAAARLPFKELWTPG----AAYGDIRLGRVSNIPFKLDSTQPSPEKRKEYFDRFVSKTPMPRSLWYPTTRVLRYYDRYDSGAVHIAKEEDKAFLEHVRRCYEVDLVDVETEAVFDPVANSGSFTMEIILLRKLITRGTSLAARSP-----DLTPLVERCILNSVYKRPTLAEMKS--RHLS-SLTAAAAAGVSGAGAGASSVLGREFTPSTKDMGGYASIDVSLSGLINSVRDEETNSYIEGGQIHHPAKMLLELENLQHRSLVKQPDCLSVELYEHQKQDAQWMMDQEMLEGGSMQHLWAELPAHHLAPADGQRINEFRRCWFSPILNQFTAIDPFASTMKGGILCDEMGLGKTAATLCLHLIHPPKTPAPGVPLDEKEWGPILGKQASPLTD--CKSVTGETEEPGKWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGNRRKDPAFLAKFDIVVTTYGVVQYDASRNSGFPPLRRIRWWRVVLDESHTIATAKHATNEVRDIVSNRRWCMTGTPYISRFSDANGQLSFVGAGGAFRGSDLGDKGPNRETQVETVAFLRRVLFRHSQGMKLGGKSILGLPSITHKVEVLALPTKERKAYVDFEKGLQNDYIMVRHRLRTQKGSHTMEVLTLLSKFRQACSGGQLLVGDSATVGYDGEGPT-PASVDAFCPICNDIIESPVRTKCGHIFCQACISSVLTKKEDDQGPCPKCKKTVRLDDLTHVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPGTGVVMETKLKALVEMLAGIHAKDPTSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGSMSRTQRTAALTAFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAVGRVYRLGQTRPVTVTKLVLKDSIETRILALQKKQATEGSASAAVGAGSNGIAGNIARDNAKNLKIDEYNALFGV 1317
BLAST of mRNA_P-littoralis_Contig112.108.1 vs. uniprot
Match: D7G0S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S9_ECTSI) HSP 1 Score: 1410 bits (3651), Expect = 0.000e+0 Identity = 815/1335 (61.05%), Postives = 939/1335 (70.34%), Query Frame = 2
Query: 344 GVEVLSPWAVKMTSEWSVKSEDKKRTAEASKKAEQSGEVQVTPKPPQKI-DEIENRPAKRSKWGGAGAEDDLEMVGTTGTAKLPHNRFACTEHPFTGWHGNTEHKEKCALCYCYVCDRLANDCKEWNDHCHATDSGGFKSSWKSLRQRAKPLLQAGKSPPVSGRYLANAPPPLVGVFSPTASNAAVGNGASXXXXXXXXXXXXXXXXGSRWPFSKGQSALVHDPNASLPNACNCEALCKPIHKVFRFFHQYNGFAKAGVAAVYLKGLTLEQVDHVQNISVQATVDRTIQKRVGLHTNPNTLAAYNIA-------RYDREATPIVQVKFAGVNKRDVTVAGVDPQHPAGGLMASDPFAVKWKPGDVAPHAAIAVRLGGVTNISFKMNLTLKSTSERQEYFDRFVSESPMAQSVWSSTARHPH-NDRFEAGPVMIAKVADTELLKQLKDAYEQEFVDVEAKAVYNASANVGSFSLEVILLNRLLRRGTSLQSRSGHARDVDFVPIVERVILKRTFQHPSSYSKKKGV--------KNLSPSFFGGS--GAXXXXXXXXXXVALGREFTPSTKGYGGRSSLDVSLSGLVNSVRDEESNSNISAGAIISPAKMLLELENLQHRSLPKQPDCLTVQLFEHQKQDAQWMMDQELLQGGTMQHLWAELPQHPLAPSGPPFRSEFRRCWFSPVLNQFTLADPFTSTMKGGILCDEMGLGKTAATLCLHLIHPAKTPSPGVPLDEKEWGSIAGLQAEKLTNNAVPGIASRTEAPGTFVSKGTLVVCKVSLVGQWVEEAKRLCGGALTIYPYHGGGRRKDPEFLTKYDMVVTTYGVVQADASRNRQFPPLRRIRWWRVVLDESHTIASTSSTTKMVKELIANRRWCMTGTPYISRFSDVNGQLGFIGAEGAFKA-ADLGDRGANTRTQSETVAFLRRVLLRHSQGMKLGGKSILGLPSITHKVEVLTMPTKERDAYVEFEKGIQKDFCKVRYRLRNMNGSHTMEVLTLLSKFRQACSGGQLLVADSTAAGGAASGSSGTATVDAFCSICNEILESPVRTSCGHIFCQACITSMLTKTNNDQGPCPKCKTTVSLSALTLVGXXXXXXXXXXXXXGYGAK------SEPREHVGGEGXXXXXXXXXXSAKPG--VVMETKLKALVAKLAGIHAKDPTSKSLVFSQFNSSLEWLKRTLPKKGFQFRTLTGSMSRSQRTAALTAFANDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAVGRVYRLGQARPVVVTKLVLKDSIETRILDVQKKQAQQGASSAAVGAASNT----VAGNIARDNAKNLKIEEYNELFGVTE 4252
GVEVLSPWA+KM ++ VK+E KR AEAS KA+QSGEVQVT KPP+ I +E+ RPAKRS+ G E+D+E+VGTTGTAKLPHNRFACTE F G G+ HKEKC+LC+CYVCDRLA+ C W DHCHATDSG K WKSLR RAKPLLQAG PPVSGR+ A ++S T AA AAVYL GLT EQV HV++ISVQ+T+DR +QK + L P+ + + A +++ P V+V + +V VAG +P +PF +WK AVRLG + I F++ S S R+EYFDRFVS P+A SVW ST R D FE+G + ++K AD ELL+QLK AYE+E VD++A A Y++ N G FSLE++LL + + R T+L RSG + D VP+VER IL R + S + L P G S G XXXXX GR FTPS KGYGGR+SLDVSLSGL++SVR EE N+N+ II PAKMLLELENLQHRSL KQPDCLTV L+EHQKQDAQWMMDQE+L+GG+MQHLWAELP H LA EFRRCWFSP+LNQFT +PF STMKGGILCDEMGLGKTAATLCLHLIHP +TP+PGVPLDEKEWG I G QAE L S EAPG +VSKGTLVVCKVSLVGQWVEEAKRLCGGAL+IYPYHGGGR KDP FL+++DMVVTTYGVVQAD + N F PLRRIRWWRVVLDESHTIAS++STT VK L++NRRWCMTGTPYISRFSDVNGQL F+GAEGAF+ +DLGD+ TQ ETVAFLRRVLLRHSQGMKLGG SILGLP+IT+KVEVLT+ +KER AYV+FE+G+Q D+ KVR+RLR GSHTMEVLTLLSKFRQACSGGQL+V S A GG ++ AT+DAFCS+CNEILE+PVRT CGH FCQACI+S+LTK+ +D+GPCP+CKT V L+ LT VG XXXXXX + XXX XXX S+ PG VVMETKLKALV KLAGIHAKDPTSKSLVFSQFNSSLEWLKRTLPK+GFQFRTLTG+MSR+QRTAALTAFA DPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQA+GRVYRLGQ RPV VTKLVLKDSIETRIL +QKKQA +G++SAAVGA S++ VAGNIARDNAK+LKI EYN LFGV+E
Sbjct: 56 GVEVLSPWALKMQAKKEVKNEGLKRAAEASAKAQQSGEVQVTDKPPEMINEEVARRPAKRSRGGD---EEDMEVVGTTGTAKLPHNRFACTELKFEGPEGSRSHKEKCSLCFCYVCDRLASQCLVWYDHCHATDSGPRKKLWKSLRTRAKPLLQAGGRPPVSGRFSA--------LYSFTLGTAAS-------------------------------------------------------------------------AAVYLNGLTQEQVQHVEDISVQSTLDRAVQKTL-LKEYPSGMKLMSAAAKTKAAKKHEDRMKPTVRVVATLGGRSNVAVAGFTESNP-------EPFKPRWKSWS---WGTTAVRLGAIKGIGFRIGGFPSSASGRKEYFDRFVSPKPIAPSVWHSTKRQASPGDCFESGRLFMSKNADAELLEQLKVAYERELVDIQASASYSSQTNTGCFSLEIVLLTKAVDRSTALNPRSGQS-SFDMVPLVERCILNRVHKTNSXXXXXXXXXXXXXXSGRPLQPVVNGVSAYGGGXXXXXGPGGTVAGRAFTPSNKGYGGRASLDVSLSGLIDSVRAEERNNNVEERRIIHPAKMLLELENLQHRSLAKQPDCLTVDLYEHQKQDAQWMMDQEMLEGGSMQHLWAELPPHHLANGR--CSHEFRRCWFSPILNQFTTDNPFASTMKGGILCDEMGLGKTAATLCLHLIHPPRTPAPGVPLDEKEWGPILGKQAEPLAYKKAQASVS-PEAPGQWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGGRSKDPSFLSQFDMVVTTYGVVQADGASNVGFAPLRRIRWWRVVLDESHTIASSNSTTTHVKTLVSNRRWCMTGTPYISRFSDVNGQLAFLGAEGAFRGGSDLGDKAPRRETQGETVAFLRRVLLRHSQGMKLGGHSILGLPTITNKVEVLTLSSKERKAYVDFEQGVQNDYIKVRHRLRTQKGSHTMEVLTLLSKFRQACSGGQLVVGASAAGGGGST----PATLDAFCSMCNEILEAPVRTRCGHTFCQACISSVLTKSKDDEGPCPRCKTAVRLTDLTSVGGGSVATGXXXXXXXXKPEYXXXXXXXXXXXXXXXXXXXPXXXHSHSSSPGAGVVMETKLKALVEKLAGIHAKDPTSKSLVFSQFNSSLEWLKRTLPKRGFQFRTLTGNMSRTQRTAALTAFAKDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAIGRVYRLGQTRPVTVTKLVLKDSIETRILALQKKQATEGSASAAVGAPSSSSSDGVAGNIARDNAKDLKIGEYNALFGVSE 1287
BLAST of mRNA_P-littoralis_Contig112.108.1 vs. uniprot
Match: D7G0T2_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T2_ECTSI) HSP 1 Score: 907 bits (2345), Expect = 1.240e-303 Identity = 534/1030 (51.84%), Postives = 630/1030 (61.17%), Query Frame = 2
Query: 395 VKSEDKKRTAEASKKAEQSGEVQVTPKPP-QKIDEIE-----NRPAKRSKWGGAGAEDDLEMVGTTGTAKLPHNRFACTEHPFTGWHGNTEHKEKCALCYCYVCDRLANDCKEWNDHCHATDSGGFKSSWKSLRQRAKPLLQAGKSPPVSGRYLANAPPPLVGVFSPTASNAAVGNGASXXXXXXXXXXXXXXXXGSRWPFSKGQSALVHDPNASLPNACNCEALCKPIHKVFRFFHQYNGFAKAGVAAVYLKGLTLEQVDHVQNISVQATVDRTIQKRVGLHTNPNTLAAYNI-ARYDREATPIVQVKFAGVNKRDVTVAGVDPQHPAGGLMASDPFAVKWKPGDVAPHAAIAVRLGGVTNISFKMNLTLKSTSERQEYFDRFVSESPMAQSVWSSTARHP-HNDRFEAGPVMIAKVADTELLKQLKDAYEQEFVDVEAKAVYNASANVGSFSLEVILLNRLLRRGTSLQSRSGHARDVDFVPIVERVILKRTFQHPS-SYSKKKGVKNLSPSFFGG-SGAXXXXXXXXXXVALGREFTPSTKGYGGRSSLDVSLSGLVNSVRDEESNSNISAGAIISPAKMLLELENLQHRSLPKQPDCLTVQLFEHQKQDAQWMMDQELLQGGTMQHLWAELPQHPLAPSGPPFRSEFRRCWFSPVLNQFTLADPFTSTMKGGILCDEMGLGKTAATLCLHLIHPAKTPSPGVPLDEKEWGSIAGLQAEKLTNNAVPGIASRTEAPGTFVSKGTLVVCKVSLVGQWVEEAKRLCGGALTIYPYHGGGRRKDPEFLTKYDMVVTTYGVVQADASRNRQFPPLRRIRWWRVVLDESHTIASTSSTTKMVKELIANRRWCMTGTPYISRFSDVNGQLGFIGAEGAFKAADLGDRGANTRTQSETVAFLRRVLLRHSQGMKLGGKSILGLPSITHKVEVLTMPTKERDAYVEFEKGIQKDFCKVRYRLRNMNGSHTMEVLTLLSKFRQACSGGQLLVADSTAAGGAASGSSGTATVDAFCSICNEILESPVRTSCGHIFCQ 3454
VK+E KR AEAS A+QSGEV VT KPP +KI++ E +RPAKRSK G E+D+E+VGTTGTAKLPHNRFACTEH F G G++ HKEKC+LC+CYVCD A++C W DHCHATD+G KSSWK LR+RAK L+AGK PPP++ S S L + + K RF +Y G + +A LA +NI AR+ P V+ KRDVTVA D + A A PF W PG H AI R G V+NI FK++ T S +R+EYFDRFVS++PM +S+W T R P + DR+++G V IAK D L+ ++ YE + VDVE +AV++ AN GSF++EVILL +++ RGTSL +RS D P+VER IL R + P+ + K + + +L+ + G SGA LGREFTPSTK YGG +S+DVSLSGL+NSVRDEE+NS I G I PAK L +EFRR WFSP+LNQFT +PF STMKGGILCDEMGLGKTAATLCLHLIHP KTP+PGVPLDEKEWG I G QA LT+ + E PG +VSKGTLVVCKVSLVGQWVEEAKRLCGGAL+IYPYHGG RRKDP FL K+D+VVTTYGVVQ DASRN FPPLRRIRWWRVVLDESHTIA+ T V+++I+NRRWCMTGTPYISRFSD NGQL F+GA AF+ +DLGD+G N TQ ETVAFLRRVLLRHSQGMKLGGKSILGLPSITHKVE L +PTKER AYV+FEKG+Q D+ KVR+RLR GSHTMEVLTLLSKFRQACSGGQLLV DS GG GS+ A+VDAFC ICN+I+ESPVRT CGH FCQ
Sbjct: 141 VKNEGVKRAAEASAMAQQSGEVLVTDKPPAEKINQEEQEEGASRPAKRSKGGD---EEDMEVVGTTGTAKLPHNRFACTEHKFDGPQGSSGHKEKCSLCFCYVCDLPASECLAWGDHCHATDTGPMKSSWKLLRERAKAYLRAGK------------PPPMIASVSSMTST-----------------------------------------------------LDREVQK--RFQRRYPGATGSALAP---------------------------------------LARHNILARFASGLKPNVRTVILPNGKRDVTVACNDRE--ASYAAARLPFKELWTPGTA--HGAI--RFGRVSNIPFKLDSTQPSPEKRKEYFDRFVSKTPMPRSLWYPTTRVPSYYDRYDSGAVDIAKEEDKAFLEHVRRCYEVDLVDVETEAVFDPVANAGSFTVEVILLRKVITRGTSLAARSP-----DLTPLVERCILNRVHKRPTLAEIKSRHLSSLTAAAAAGVSGAGAGASS-----VLGREFTPSTKDYGGYASVDVSLSGLINSVRDEETNSYIEGGQIHHPAKSGQRL-------------------------------------------------------------NEFRRSWFSPILNQFTAVNPFASTMKGGILCDEMGLGKTAATLCLHLIHPPKTPAPGVPLDEKEWGPILGKQASPLTDRK--SVTGEPEEPGKWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGNRRKDPAFLAKFDIVVTTYGVVQYDASRNSGFPPLRRIRWWRVVLDESHTIATAKHATNEVRDIISNRRWCMTGTPYISRFSDANGQLSFVGAGSAFRGSDLGDKGPNRETQVETVAFLRRVLLRHSQGMKLGGKSILGLPSITHKVEALALPTKERKAYVDFEKGLQNDYIKVRHRLRTQKGSHTMEVLTLLSKFRQACSGGQLLVGDSATVGGDGDGST-PASVDAFCPICNDIIESPVRTKCGHTFCQ 981
BLAST of mRNA_P-littoralis_Contig112.108.1 vs. uniprot
Match: A0A835YWG4_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWG4_9STRA) HSP 1 Score: 589 bits (1518), Expect = 1.840e-176 Identity = 363/740 (49.05%), Postives = 470/740 (63.51%), Query Frame = 2
Query: 2120 ELENLQHRSLPKQPDCLTVQLFEHQKQDAQWMMDQELLQGGTMQHLWAELPQHPLAPSGPPFRSEFRRCWFSPVLNQFTLADPFTSTMKGGILCDEMGLGKTAATLCLHLIHPAKTPSPGVPLDEKEWGSIAGLQAEKLTNNAVPGIASRTEAPGTFVSKGTLVVCKVSLVGQWVEEAKRLCGGALTIYPYHGGGRRKDPEFLTKYDMVVTTYGVVQAD----------ASRNRQFPPLRRIRWWRVVLDESHTIASTSSTTKMVKELIANRRWCMTGTPYISRFSDVNGQLGFIGAEGAFKAADLGDRGANTRTQ---SETVAFLRRVLLRHSQGMKLGGKSILGLPSITHKVEVLTMPTKERDAYVEFEKGIQKDFCKVRYRLRNMNGSHTMEVLTLLSKFRQACSGGQLLVADSTAAGGAASGSSGTATVDAFCSICNEILESPVRTSCGHIFCQACITSMLTKTNNDQGPCPKCKTTVSLSALTLVGXXXXXXXXXXXXX-----GYGAKSEPREHVGG----------EGXXXXXXXXXXSAKPGVVMETKLKALVAKLAGIHAKDPTSKSLVFSQFNSSLEWLKRTLPKKGFQFRTLTGSMSRSQRTAALTAFANDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAVGRVYRLGQARPVVVTKLVLKDSIETRILDVQKKQAQQGASSAAVGAASNTVAGNIARDNAKNLKIEEYNELFGVTEE 4255
E+ENL H L +QP+ LTV L+EHQ+Q +WM+DQE L G QHLWA P P + WFSPVLN FT DP + KGGILCDEMGLGKTA TL LHL++ KT DE EWG I + R G VSKGTLVVC VSLVGQWVEEA+RLC L+IYPYHGG R KDP+ L +YD+VVTTYG+ + D A R + PPL+ I +WR VLDESHTI +T+ + V +I+NRRW ++GTP S D+ GQL + G ++A R A++ + + + FLR +++RH+Q L G+ ILGLP I + ++ ER AYV+ EK +Q + VRY LR+ GSH+M+VLTL+S++RQACSGG + + + A AA+G G +DA C ICNE+L++P T+C H+FC CIT+ +TK D+G CPKCK VSL ++ LVG XXXXXXXX G GA P + GG XXXXXXXX + GVVME+KLK LV LA I KD +K+LVFSQF S+L +L+R LP+ GF+FRTLTG MSR QRT AL F +DPPTT+FLLSVRSGA GINLT A++VF+LEP LNLALE QA+GRV+RLGQ R V V KL ++ S+E+RI+ +Q ++ + A + + T AG+I++D AK L+I++YN+LF V ++
Sbjct: 813 EIENLGHAPLDQQPEELTVTLYEHQRQGVKWMLDQEKLPHGISQHLWAPFPLPQPRPD--------EKIWFSPVLNAFTAIDP--AGPKGGILCDEMGLGKTACTLALHLLNQPKTDG-----DESEWGKINRHNLDVTDKK-------RASEYGAHVSKGTLVVCAVSLVGQWVEEARRLCDNKLSIYPYHGGSRTKDPKKLAQYDIVVTTYGICETDMRMHNKEGNVAGRPGRVPPLQAINFWRCVLDESHTIKTTNRLSAAVATIISNRRWLVSGTPANSNLGDLTGQLKNLDI-GNLRSALAPLRYADSSNEISVRQALPFLRSIMMRHTQAQTLNGRHILGLPPINKEAVLVKWAPHERTAYVKLEKELQSQYKSVRYLLRSAKGSHSMKVLTLMSQYRQACSGGAI-INSAALAEAAAAGGQGATVMDALCPICNELLDTPAITTCNHVFCHLCITAHVTK-KADKGTCPKCKKVVSLESIQLVGAGAXXXXXXXXEGSAATAGGGAPMGP--NAGGVQGXXXXXXXXXXXXXXXXXDAPQQGGVVMESKLKVLVGMLAAIRGKDANAKALVFSQFTSTLRYLQRELPRHGFEFRTLTGDMSRRQRTKALEDFRSDPPTTIFLLSVRSGACGINLTAASHVFMLEPCLNLALEAQAIGRVHRLGQTRAVHVVKLYMEASVESRIIAMQTAKSDRAAQGSDEDRPA-TAAGSISKDGAKELRIKDYNDLFAVDDD 1524
BLAST of mRNA_P-littoralis_Contig112.108.1 vs. uniprot
Match: D7G0T8_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T8_ECTSI) HSP 1 Score: 551 bits (1419), Expect = 4.930e-170 Identity = 383/1043 (36.72%), Postives = 493/1043 (47.27%), Query Frame = 2
Query: 488 IDEIENRPAKRSKWG--GAGAED---DLEMVGTTGTAKLPHNRFACTEHPFTGWHGNTEHKEKCALCYCYVCDRLANDCKEWNDHCHATDSGGFKSSWKSLRQRAKPLLQAGKSPPVSGRYLANAPPPLVGVFSPTA-SNAAVGNGASXXXXXXXXXXXXXXXXGSRWPFSKGQSALVHDPNASLPN--ACNCEALCKPIHKVFRFFHQYNGFAKAGVAAVYLKGLTLEQVDHVQNISVQATVDRTIQKRVG-LHTNPN-TLAAYNIARYDREATPIVQVKFAGVNKRDVTVAGVDPQHPAGGLMASDPFAVKWKPGDVAPHAAIAVRLGGVTNISFKMNLTLKSTSERQEYFDRFVSESPMAQSVWSSTARHPHNDRFEAGPVMIAKVADTELLKQLKDAYEQEFVDVEAKAVYNASANVGSFSLEVILLNRLLRRGTSLQSRSGHA-------RDVDFVPIVERVIL----------------------KRTFQHPSSYSKKKGVKNLSPSFFG--------------------------------------------------------------------------------------GSGAXXXXXXXXXXVA-------LGREFTPSTK---GYGGRSSLDVSLSGLVNSVRDEESNSNISAGAIISPAKMLLELENLQHRSLPKQPDCLTVQLFEHQKQDAQWMMDQELLQGGTMQHLWAELPQHPLAPSGPPFRSEFRRCWFSPVLNQFTLADPFTSTMKGGILCDEMGLGKTAATLCLHLIHPAKTPSPGVPLDEKEWGSIAGLQAEKLTNNAVPGIASRTEAPGTFVSKGTLVVCKVSLVGQWVEEAKRLCGGALTIYPYHGG-GRRKDPEFLTKYDMVVTTYGVVQADASRNRQFPPLRRIRWWRVVLDESHTIASTSSTTKMVKELIANRRWCMTGTPYISRFSDVNGQLGFIGAEGAFKAADLGDRGANTRTQSETVAFLRRVLLRHSQGMKLGGKSILGLPSITHKVEVLTMPTKERDAYVEFEKGIQK 3208
+DEI +RPAKRSK G G ED D+E++GTTG +KLPH RF+C E S P+S ++APP PT + A G G P A P +C+CE +C P+ V VYL GLT EQ H + I+V + +++V LH + T A Y P ++ K D+ +A + A P+A KW +F+ FVS +P+ ++W + + G + + + DT+LL+ LK+AY++ +DVE +A + S G F++EV+L+ +LL RG SL+ R G + R VDF+P+VER++L ++ PS + + SPS G G GA + GR+F PS GYGG+SS DV+L GL+NSVR EE + +I + + +P ++L LEN+QH +L KQPDCLTVQLFEHQ Q QWM DQE+L+GG MQHLW ELP HP P+ EFRRCW+SP LNQFT+ +PF + KGG+LCDEMGLGKTAATL LHLIHP +TPSPGVPLDEKEWG I G QA + A + T+APG VS GTLVVCKVSLVGQWVEEAKRLCG AL+IY YHGG R+KDP FL K+DMVVTTYG+VQ VLDESH++ S ++ V+EL+ANRRWCMTGTP+ S+FSD+N QL F+G G+F+ DLGD+ NT TQ E AFLRRV+LRHSQGMKLG S+LGLP+ITHKVEVLT P KE +AY +FE IQK
Sbjct: 1 MDEI-SRPAKRSKRSAPGKGCEDTEADVEIMGTTGASKLPHTRFSCPEGSVV------------------------------------------------------------PSTPMSSVSGSSAPP------GPTVDTGGADGRG----------------------------------PQAPPPPEYSCDCEEICIPVRTVIASCGANGCSTPPSKPVVYLAGLTGEQAKHAEEIAVGEALSLFARRKVHRLHRGKSKTAQALKEKHYKERHRPHIRKTQEDGGKVDMAIASRFNRQEA---SLPTPWASKWT-----------------------------------AHFETFVSRTPLPVTIWEDVLQ-------KHGALQLEQPEDTQLLQVLKNAYKESLIDVEMRAECDPSFTKGFFTVEVVLITKLLSRGYSLEERVGKSYTPEKNHRLVDFMPVVERLVLHTAVNQNAEADSASSACSPLSSSASYLSPSPSLPRTPSSSTSPSPCGSPPALPPXXXXXXIPPAPSGANAVTKKNKGKQRAITELGSDDEEEEGEYDFPPQPATPTAPTSQPFVNTFGAASNSGGDGGSSGTVGGGADASELGVGVAASGGAVVGGPGRKFRPSKPAHLGYGGQSSTDVTLEGLINSVRAEERSPSIVSKLVHNPTELLKVLENVQHGALIKQPDCLTVQLFEHQLQATQWMYDQEVLEGGAMQHLWVELPPHPQMPANHDRSCEFRRCWYSPALNQFTVKNPFKAGTKGGLLCDEMGLGKTAATLALHLIHPPQTPSPGVPLDEKEWGPITGKQATPMV--APKSTSGGTKAPGKVVSTGTLVVCKVSLVGQWVEEAKRLCGSALSIYAYHGGYHRKKDPAFLAKFDMVVTTYGIVQ--------------------VLDESHSLNHGSGSSNAVRELVANRRWCMTGTPFTSKFSDLNRQLSFVGVAGSFRDRDLGDKRPNTDTQVEVTAFLRRVVLRHSQGMKLGANSLLGLPTITHKVEVLTPPPKELEAYHDFENTIQK 875
BLAST of mRNA_P-littoralis_Contig112.108.1 vs. uniprot
Match: A0A7S4MXR8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MXR8_9STRA) HSP 1 Score: 403 bits (1036), Expect = 6.490e-112 Identity = 268/787 (34.05%), Postives = 401/787 (50.95%), Query Frame = 2
Query: 2111 MLLELENLQHRSLPKQPDCLTVQLFEHQKQDAQWMMDQELLQGGTMQHLWAELPQH-PLAPSGPPFRSEFRRCWFSPVLNQFTLADPFTSTMKGGILCDEMGLGKTAATLCLHLIHPAKT-PSPGVPL-------------DEKEWGSIAGLQAEKLTNNAVPGIASRTEAPGTFVSKGTLVVCKVSLVGQWVEEAKRLCGGALTIYPYHGGGRRKDPEFLTKYDMVVTTYGVVQADA------SRNRQFPPLRRIRWWRVVLDESHTIASTSSTTKMVKELIANRRWCMTGTPYISRFSDVNGQLGFIGAEGAFKAADLGDRGANTRTQSET----------------------VAFLRRVLLRHSQGMKLG--GKSILGLPSITHKVEVLTMPTKERDAYVEFEKGIQKDFCKVRYRLRNMNGSHTMEVLTLLSKFRQACSGGQLLVADSTAAGGAASGSSG---TATVDAFCSICNEILESPVRTSCGHIFCQACITSMLTKTNNDQGPCPKCKTTVSLSALTLVGXXXXXXXXXXXXXGYGAKSEPREHVGGEGXXXXXXXXXXSAKPGVVMETKLKALVAKLAGIHAKDPTSKSLVFSQFNSSLEWLKRTLPKKGFQFRTLTGSMSRSQRTAALTAFANDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAVGRVYRLGQARPVVVTKLVLKDSIETRILDVQKKQ----------------------------AQQGASSAAVGAASNTVAGNIARDNAKNLKIEEYNELFG 4243
+L ELENL H P+ + LTV+L E Q+Q W +++E GG W +LP+ P + S P +F+P L+ + + P +GG + +MGLGKT +L L L +PA T P G D W + L E + +R++ + +S+GTLV+C VSLVGQW++EAK +Y YHGG R++D L + +VVTTY + +DA S + PP ++RWWR++ DESH + S TK + +L+ +WC+TGTP + +D+ Q+ FIG + D+ + Q ++ + +R +L+RHS K G S++ LP + + +K+R Y + E ++ + ++ R RN H +++ L RQACSG +L +GG + + D C+IC E LE P T C H+FC+ CI +L+ ++ GPCP C++ V +S L EP E GG+ AKPGV ++KL L+ +L I + +P +KSLVFSQFNS+++W+K LPK GFQFRTL GSM+ R AL F +DPPTT+FLLS+R+GAVGINLTQAN VFL+EP +N ALE QA+GRV+RLGQ +PV + +LV+ DS+E+R++ + +K+ A + A A G S+T G+I +D A + ++E++ LFG
Sbjct: 774 LLNELENLGHAPAPR-TEGLTVELLEFQRQAVGWALERENAPGGFQAFGWTKLPRTVPGSGSQTPAGRVNEDLYFNPALDMLSRSPP--KRARGGFISAQMGLGKTVISLALVLQNPAPTLPLSGTDARSDDVEMMGDDSNDRPGWAPKSRLNEELSHHKEF----ARSKKRASVLSRGTLVICNVSLVGQWIDEAKSKLRDPGLVYSYHGGSRKRDALILAEKSIVVTTYATLSSDAGHWAKKSGDEYCPPCEQVRWWRIICDESHVLKDMSKQTKAILDLVGENKWCVTGTPTNTSLNDLKNQMKFIGVDHTSLLFDMFGKTMENHAQPKSSGRSRRQRSIGYSVKRHECGNYLFLMRSMLIRHSMDQKYRATGVSLMSLPDKEERTIKIPFSSKDRKDYEKLESAAKQFYEGMKLRARNDLRRHYLKIFGALMPLRQACSG--VLAQHDKDSGGKKDKKACHRMSPEDDLECAICLENLEDPRATKCNHVFCRECIEGILSAEDDSTGPCPICRSEVKMSKLRRA-----------------ILPEPEEEDGGK------KGKKAKAKPGVAFKSKLNVLLRELERIRSDEPDAKSLVFSQFNSTIKWMKAELPKHGFQFRTLDGSMNMKDRAKALREFQSDPPTTIFLLSMRAGAVGINLTQANRVFLMEPAMNPALEAQAIGRVHRLGQLKPVEIIRLVICDSLESRMVKLLEKKYGKKHVGEDGDKNDSSGGEEGNDDEDGAASEAAVKPAPGQGSDTAVGSITKDKAA-VTVDEFDLLFG 1527
BLAST of mRNA_P-littoralis_Contig112.108.1 vs. uniprot
Match: A0A7S2JRT6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JRT6_9STRA) HSP 1 Score: 362 bits (928), Expect = 1.200e-104 Identity = 246/700 (35.14%), Postives = 361/700 (51.57%), Query Frame = 2
Query: 2126 ENLQHRSLPKQ-PDCLTVQLFEHQKQDAQWMMDQELLQGGTMQHLWAELPQHPLAPSGPPFRSEFRRCWFSPVLNQFTLADPFTSTMKGGILCDEMGLGKTAATLCLHLIHPA-KTPSPGVPLDEKEWGSIAGLQAEKLTNNAVPGIASRTEAPGTFVSKGTLVVCKVSLVGQWVEEAKRLCGGALTIYPYHGGGRRKDPEFLTKYDMVVTTYGVVQADASRNRQ----------FPPLRRIRWWRVVLDESHTIASTSST-TKMVKELIANRRWCMTGTPYISRFSDVNGQLGFIGAEGAFKAAD----LGDRGANT-----RTQSETVAFLRRVLLRHSQGMK--LGGKSILGLPSITHKVEVLTMPTKERDAYVEFEKGIQKDFCKVRYRL--RNMNGSHTMEVLTLLSKFRQACSGGQLLVADSTAAGGAASGSSGTATVDAF---------CSICNEILESPVRTSCGHIFCQACITSMLTKTNNDQGPCPKCKTTVSLSALTLVGXXXXXXXXXXXXXGYGAKSEPREHVGGEGXXXXXXXXXXSAKPGVVMETKLKALVAKLAGIHAKDPTSKSLVFSQFNSSLEWLKRTLPKKGFQFRTLTGSMSRSQRTAALTAFANDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAVGRVYRLGQARPVVVTKLVLKDSIETRILDVQK 4120
ENL H K D LTV+L Q+Q W +++E + GG W++LP + ++SP L+ + P ++GG +C++MGLGKT +L + L +PA T G + E + + + T+N I + G+ S+GTLVVC VSLVGQWV+EAK +YPY+G R +DP L + ++VTTY V+ +D R + PP +RWWR++ DESH + S+ + T+ VK L+A +WC+TGTP + SD+ Q+ FIG E + D LG G R + +R +++RHS G+ ++ LP T + +T+ +ER AY EK + + ++R + R N + + +L + R AC+GG + + G D F CSIC + T+CGHI+C+ CI ++T ++ GPCP C+ ++L L V A +E VG E P V ++K + L+ +L I +DP +KSL+FSQF ++L+WL+ L K GFQFRTL+G M+ R AL F DPPTTVFLLS+R+GAVGINLTQAN VF+LEP +N ALE QAVGRV+RLGQ + V + +LV+K+SIE R++ K
Sbjct: 1 ENLGHPVSSKNLNDGLTVELRNFQEQAVSWAIERENVPGGIQSFWWSKLPN----------KVGIGDLYYSPGLDMISPKPP--KLVRGGFICEQMGLGKTVISLSIILQNPAPSTLQSGTLVTEDALDTASNGWSS--TDNCAQKIGESNKC-GSIFSRGTLVVCNVSLVGQWVDEAKSKLKDPGLVYPYYGQNRNRDPIKLAQNSIIVTTYAVLASDMQRYERNKGKAGSKWDIPPCESVRWWRIICDESHCLRSSQTKQTQAVKRLVAENKWCVTGTPMNTNLSDLRSQMEFIGIENLNRMFDCFKGLGKTGGKNMPRCFRALERFLLVMRSMMIRHSMNQTNISSGRELMELPKKTERTIKITLTKEERKAYNTIEKSAMEFYRRLRMQEDERVFNRKY-LAILQKMIPMRLACAGGPVSQNATQKCADIDKGDK-----DRFHAKPDEHTECSICLNDFDDARATACGHIYCKECIEGVITAMDSSTGPCPICRREINLEMLRQVTF---------------ADNE----VGDE------ENEGRDDSPDFVFKSKFEVLLRELRLIRVEDPEAKSLIFSQFKTTLKWLQTELVKHGFQFRTLSGDMTMKARAKALRDFQADPPTTVFLLSMRAGAVGINLTQANRVFILEPAINPALETQAVGRVHRLGQTKSVEIVRLVVKESIEERMIHFLK 654
BLAST of mRNA_P-littoralis_Contig112.108.1 vs. uniprot
Match: A0A7S1Z2T4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z2T4_9STRA) HSP 1 Score: 372 bits (956), Expect = 6.180e-102 Identity = 252/702 (35.90%), Postives = 368/702 (52.42%), Query Frame = 2
Query: 2114 LLELENLQHRSLPKQPDCLTVQLFEHQKQDAQWMMDQELLQGGTMQHLWAELPQHPLAPSGPPFRSEFRRCWFSPVLNQFTLADPFTSTMKGGILCDEMGLGKTAATLCLHLIHPAK-TPSPGVPLDEKEWGSIAGLQAEKLTNNAVPG--IASRTEAPGTFVSKGTLVVCKVSLVGQWVEEAKRLCGGALTIYPYHGGGRRKDPEFLTKYDMVVTTYGVVQADA-------SRNRQFPPLRRIRWWRVVLDESHTIASTSSTTKM-VKELIANRRWCMTGTPYISRFSDVNGQLGFIGAE------GAFKAADLGDRGANTRTQSETVAFLRRVLLRHS--QGMKLGGKSILGLPSITHKVEVLTMPTKERDAYVEFE-------KGIQKDFCK-VRYRLRNMNGSHTMEVLTLLSKFRQACSGGQLLVADSTAAGGAASGSSGTATVD-AFCSICNEILESPVRTSCG---HIFCQACITSMLTKTNNDQGPCPKCKTTVSLSALTLVGXXXXXXXXXXXXXGYGAKSEPREHVGGEGXXXXXXXXXXSAKPGVVMETKLKALVAKLAGIHAKDPTSKSLVFSQFNSSLEWLKRTLPKKGFQFRTLTGSMSRSQRTAALTAFANDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAVGRVYRLGQARPVVVTKLVLKDSIETRILDVQKKQ 4126
L +LENL H P L ++L Q+Q W +++E +GG HLW ++P APS R + +FSP L+ F+ P ++GGIL +EMGLGKT +L L L++PA P G + + G T G + + + G+ S+GTLVVC VSLVGQW +EAK I YHG R K+ L K +VVTTY + +DA + R PP +IRWWR++ DESHT+ ++ + + L+ +WC+TGTP + +D+ QL F+G + G F ++ G + + + +R +++RHS Q + GK ++ LPSI+H + +ER Y + E KG++K K VR R + V + L+ R AC+GGQ+L DS A +G + CSIC + +P T C H+FC+ CI ++ GPCP C+ V +S L SE ++ E ++K+ L+ +L + +DP +KSL+FSQF S+LEW+KR LP GFQ+RTL+G M+ S+R AL F ND +TVFLLS+R+GAVGINLTQAN VFL+EP +N ALE QA+GRV+RLGQ++ VVVT+L + +SIETR+ ++ +K+
Sbjct: 774 LQQLENLGHNPCPA-VSGLNIELLAFQRQAVGWAIERENTEGGVQSHLWVKIP----APSDGRQRKS-KDVYFSPALDMFSHHAP--EKVRGGILAEEMGLGKTVISLALVLLNPAPPAPESGTKVASFDLGKPDTSMQNGWTKGGKTGRPTSENSASRGSIFSRGTLVVCNVSLVGQWTDEAKSKLKDPGLICSYHGTNREKNATILAKNAIVVTTYATLASDAFYHKNKSNSTRYCPPCEKIRWWRIICDESHTLKDGNTRNSIALGGLVGENKWCVTGTPMNTSIADLRNQLAFVGIQHTKAMFGVFNSSSDG----SDDWKGSFLFTMRNLMMRHSMKQKQRANGKDLMSLPSISHHTIRIPFSLEERSEYKKLEDKALGVYKGLKKRGMKEVRKRY--------LLVTSALTPLRIACAGGQILENDSKEANANKTGKKHVIDPENTTCSICQDCFVNPRATQCKPSPHVFCEECIEGVI-GIKGSAGPCPLCRQPVKMSNLLCAEFPEV------------CHSEEKKSSKDETKNMCQF----------AFKSKVSRLLQELKKVRDEDPKAKSLIFSQFKSTLEWIKRELPMHGFQYRTLSGDMAMSKRAKALRDFQNDSASTVFLLSIRAGAVGINLTQANRVFLMEPAMNPALEAQAIGRVHRLGQSQKVVVTRLFMTESIETRLAELIEKK 1432
BLAST of mRNA_P-littoralis_Contig112.108.1 vs. uniprot
Match: A0A7S2NSH7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NSH7_9STRA) HSP 1 Score: 363 bits (932), Expect = 1.060e-101 Identity = 262/752 (34.84%), Postives = 372/752 (49.47%), Query Frame = 2
Query: 2123 LENLQHRS---LPKQPDCLTVQLFEHQKQDAQWMMDQELLQGGTMQHLWAELPQHPLAPSGPPFRSEFRRCWFSPVLNQFTLADPFTSTMKGGILCDEMGLGKTAATLCLHLIHPAKTPSPGVPLDEKEWGSIAGLQAEKLTNNAVPGIASRTEAP------GTFVSKGTLVVCKVSLVGQWVEEAKRLCGGALTIYPYHGGGRRKDPEFLTKYDMVVTTYGVVQADASRNR-------QFPPLRRIRWWRVVLDESHTIASTSSTTKMVKELIANRRWCMTGTPYISRFSDVNGQLGFIGAEGAFKAADL---------------GDRGANTRTQSETVAFLRRVLLRHSQGMKLGGK--SILGLPSITHKVEVLTMPTKERDAYVEFEKGIQKDFCKVRY-RLRNMN--GSHTMEVLTLLSKFRQACSGGQLLVADS----TAAGGAASGSSGTATVDAFCSICNEILESPVRTSCGHIFCQACITSMLTKTNNDQGPCPKCKTTVSLSALTLVGXXXXXXXXXXXXXGYGAKSEPREHVGGEGXXXXXXXXXXSAKPGVVMETKLKALVAKLAGIHAKDPTSKSLVFSQFNSSLEWLKRTLPKKGFQFRTLTGSMSRSQRTAALTAFANDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAVGRVYRLGQARPVVVTKLVLKDSIETRILDVQKKQAQQGA---SSAAVGAASNTVAGNIARDNAKNLKI--EEYNELFG 4243
LENL H + +TV L Q+Q QW +++E ++GG + W +LP++ + + WFSP L+ F+ P ++GG++C+EMGLGKT +L L L++PA P PL + + K++ N AS E G +S+GTLVVC VSLVGQWV+EA+ +YPY+GG R ++P L + +VVTTY V+ +D SR +FPP I WWRV+ DESH++ T+S T+ V L A RWC+TGTP + +D+ Q+ FIG E A G + + E + +R +L+RH+ K S++ LP + ++ E Y E D K Y R RN + G + ++ L+ R ACSGG + D A GG +G + CSIC + T C H+FC+ CI +L CP C+ V S L + P G S V +K L+ +L I K+ SKSL+FSQF S+L++L+ L K GF +RTL G MS R AL F NDPPTTVFLLS+R+GAVGINLTQAN VFL+EP LN AL QAVGRV+R+GQ + V + +L++KDS+E R+ ++ KK+ A S AA GAA+ + GN+ + + E+++ LFG
Sbjct: 289 LENLGHSEGDVAERLLGQMTVDLLPFQRQAVQWALERENMEGGVQRLWWTKLPENRTGNA-----ANKDSLWFSPALDMFSKNPP--KRIRGGLICEEMGLGKTVISLALCLLNPA----PATPLSGSLTEAAYANASSKISCNDSDWTASNMEPDSVRTERGRIISRGTLVVCHVSLVGQWVDEARSKLSDPGLVYPYYGGDRNRNPVTLAQNAIVVTTYAVLASDLSREGNTKNPKFKFPPCESIHWWRVICDESHSLRKTNSNTRAVLSLSAELRWCVTGTPLNTTVTDLRNQMDFIGFERRHTAVMFHRFLEICDERKKDRYGFKEPDRSRVGEFLMIMRSILMRHTSRQKTQATKLSLMQLPEKKDETVRISFGANELVRYKAME-----DIAKKTYERARNADDFGRQYLFLMQSLNPMRMACSGGTAVEKDDGNEVVAIGGGIHQMTGRDGMH--CSICLTVFNDARATPCKHVFCKVCIVGVL---GAHGSTCPICRNFVHPSYLI--------------------PTLPPVVANGSNGNDTMAARGQSNDNHGVFRSKFNELLRQLKNIRDKESGSKSLIFSQFTSTLDFLQGELTKHGFSYRTLRGDMSMKARAKALRDFQNDPPTTVFLLSMRAGAVGINLTQANRVFLMEPALNPALVAQAVGRVHRIGQTKDVQIVRLIMKDSVEERMEELVKKKYGDAANQDSPAAKGAAATAIVGNLTGEKKAHSSSNREDFDLLFG 999
BLAST of mRNA_P-littoralis_Contig112.108.1 vs. uniprot
Match: A0A8J9RP02_9CHLO (Probable helicase-like transcription factor at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RP02_9CHLO) HSP 1 Score: 370 bits (951), Expect = 5.110e-101 Identity = 264/711 (37.13%), Postives = 366/711 (51.48%), Query Frame = 2
Query: 2114 LLELENLQHRSLPKQPDCLTVQLFEHQKQDAQWMMDQELLQGGTMQHLWAELPQHPLAPSGPPFRSEFRRCWFSPVLNQFTLADPFTSTMKGGILCDEMGLGKTAATLCLHLIHPAKTPSPGVPLDEKEWGSIAGLQAEKLTNNAVPGIASRTEAP-GTFVSKGTLVVCKVSLVGQWVEEAKRLCGGALTIYPYHGGGRRKDPEFL-TKYDMVVTTYGVVQAD--------ASRNRQFPPLRRIRWWRVVLDESHTI-ASTSSTTKMVKELIANRRWCMTGTPYISRFSDVNGQLGFIGAEGA---------FKAADLGDRGANTRTQSETVAFLRRVLLRHSQGMKLGGKSILGLPSITHKVEVLTMPTKERDAYVEFEKGIQKDFCKVRYRLRNMNGSHTMEVLTLLSKFRQACSGGQLLVADSTAAGG-----AASGSSGTATVDAF-CSIC-NEILESPVRTSCGHIFCQACITSMLTKTNNDQGPCPKCKTTVSLSALTLVGXXXXXXXXXXXXXGYGAKSEPREHVGGEGXXXXXXXXXXSAKPGVVMETKLKALVAKLAGIHAKDPTSKSLVFSQFNSSLEWLKRTLPKKGFQFRTLTGSMSRSQRTAALTAFANDPPTTVFLLSVRSGAVGINLTQANNVFLLEPLLNLALEKQAVGRVYRLGQARPVVVTKLVLKDSIETRILDVQKKQAQQGASSAAVGAA 4165
L++ + R QP LTV+L +Q+Q ++M+D EL +GG +H W PSG F W+SP+ N+ + GG L +EMG GKT L L L +PA P +AS + P G VS+ TLVVC VSLVGQW+EEAK G+L +Y YHG GR KDP L T YD+VVTTY + +D ++ + +F PL +I+W RVVLDESHT+ A + T L A+RRWC +GTP + S+ GQ F+G + K A T + L R L+RH+Q +LGG ++ LP T + + E+ Y+ K + +F K M + + +++LLS R CSGG L D +G CSIC N +E P RT C H FC+ CIT+ L CP C+T + ++ L + G A+ E E VG G + VV E+KL+AL+ +LA + +DPT+K+L+F+QFNS+LEWL L ++G+ +RT++GSM +R+ A+ AF DPPTTVFLLS+RSGAVGINLT AN+VF+LEP +N ALE QAVGR +R+GQ RPV V KL +K S+E RI+++ K + + A+ AA A
Sbjct: 859 LMKWLQAEERPEAPQPPGLTVELHPYQRQSLRFMIDNELGEGGHRRHFWVPYK----TPSGFTF-------WWSPLFNR--ASREVAPCPWGGFLAEEMGCGKTVEILALILSNPA-----------------------------APNVASGSVLPDGCIVSRATLVVCAVSLVGQWMEEAKSKLNGSLRMYQYHGQGRNKDPVTLATSYDLVVTTYQTLGSDWRMYNKKGSNTDGRFKPLGQIKWHRVVLDESHTVKAGGTQQTAACCALNADRRWCCSGTPISTEVSEFVGQFKFLGCQPFDNKNYFSCHIKPAWSAGGWQTTGGAVNLLYALGRTLIRHTQQQRLGGATVCKLPEKTEEAIAVEFSEAEQRLYLRVHKEAKAEFQKYANGGSMMVARNLLAIMSLLSPLRAICSGGLLRERDVRVPNKDQEEEVPNGVDPNLVAPLEECSICLNHDMERPCRTPCLHWFCRECITAELAVREK----CPLCRTELQVAQL-VEGVSA-------------AREEDEEVVGAAGSS--------AGSQAVVSESKLRALLKQLADMRERDPTAKALIFTQFNSTLEWLMARLTEEGYSYRTISGSMPLKKRSQAIDAFQRDPPTTVFLLSMRSGAVGINLTAANHVFILEPAMNPALEDQAVGRAFRMGQTRPVTVKKLYIKGSVEERIMELVKDRREGRATGAAAAQA 1501 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig112.108.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig112.108.1 >prot_P-littoralis_Contig112.108.1 ID=prot_P-littoralis_Contig112.108.1|Name=mRNA_P-littoralis_Contig112.108.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1395bp MAWWAAHLSDAKESSKTVDLDDDDDAIIDLTSDTETASPSSPGSGAGASPback to top mRNA from alignment at P-littoralis_Contig112:422673..452235+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig112.108.1 ID=mRNA_P-littoralis_Contig112.108.1|Name=mRNA_P-littoralis_Contig112.108.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=29563bp|location=Sequence derived from alignment at P-littoralis_Contig112:422673..452235+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig112:422673..452235+ >mRNA_P-littoralis_Contig112.108.1 ID=mRNA_P-littoralis_Contig112.108.1|Name=mRNA_P-littoralis_Contig112.108.1|organism=Pylaiella littoralis U1_48|type=CDS|length=4185bp|location=Sequence derived from alignment at P-littoralis_Contig112:422673..452235+ (Pylaiella littoralis U1_48)back to top |