mRNA_P-littoralis_Contig112.98.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig112.98.1 vs. uniprot
Match: D8LGW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW8_ECTSI) HSP 1 Score: 260 bits (664), Expect = 4.250e-76 Identity = 195/471 (41.40%), Postives = 247/471 (52.44%), Query Frame = 3
Query: 201 DPYPLRPRPDADATSENAHRTSSPPRVLVSSSNTSFPRSAPSEAPPTGVLNARKATRCQYPACPRYAKYGMKDAPLSACQEHKRVGQYTTNRHGVLLIATRDGRAFRPSAVA------TAGPRPGNS------------------TAGA----------------------NRLGLFNGYDDGKPTSQHRPCLFPGCNARPEYGLPGAARAVYCFTHKKGSMVQLFQKALGLQDKAETTNVTAAIVSRNVAASESRTKAQAAAAGNKKTPLTSKITDKHEAKKARREPKVKWEDGSS------GERNSKKSRENCVRS----ALVERDL-----AGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTNRSTEAAGMAPSAEILLLRQARETAKKEVEATGSGKRPRAPSRRALEASGRMNDQGAQWMTRKQKAEETRVKTELREKRKQSKAAGLKLGVVLEEII 1430
DP P+ RP A ++ TSS VS +++ P + +P T L A KA RC+YP CP+YAKYG++DAP S CQ HKR GQYTTNRHG LL+ATRDG AFR AVA T P P +S ++G+ NR + + P Q+R CLFPGC+ARP YGLPGAARAVYCF+HKKGSMV LF +A + + E VTA VA +E + K S D+ AKKARRE +K ++ + G + +KK R+N + ER + A PTNR +E GM+PS E+L+LRQARE AKKE EA+G G+R RAPSRRALEASGR+ GAQWMTR+++AE+ RV TELREKRK+S+ AGL +GVVLE +
Sbjct: 7 DPNPMSSRPKT-APADETRGTSSSLSPGVSPTSSLSPPPTSTSSPKT--LLAPKAPRCEYPGCPKYAKYGLRDAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAVPVLAVTVPPSPASSEIAGMEAASAQPRRRSTGSSGSLVPSHRKPKAKLSSSVHTLKRKNRPEPSSSGHEESPALQNRSCLFPGCDARPTYGLPGAARAVYCFSHKKGSMVNLFSQAPAVNNNEEK-RVTA------VAPTEGKRKKXXXXXXX--XXXXSMTADQRGAKKARRESSIKEDNKGATSKDGGGYQGAKKIRDNEKKVNRGVGTSERSVGAIATAAAAGTSEMSTKSSAAKPPVKSTHIAKEPADTMALPPQPTNRPSE--GMSPSVEMLILRQAREAAKKEAEASGGGRRARAPSRRALEASGRLRGDGAQWMTREKRAEQARVNTELREKRKKSREAGLTVGVVLEAFV 463
BLAST of mRNA_P-littoralis_Contig112.98.1 vs. uniprot
Match: A0A6H5KYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF0_9PHAE) HSP 1 Score: 259 bits (663), Expect = 5.950e-76 Identity = 193/474 (40.72%), Postives = 246/474 (51.90%), Query Frame = 3
Query: 201 DPYPLRPRPDADATSENAHRTSSPPRVLVSSSNTSFPRSAPSEAPPTGVLNARKATRCQYPACPRYAKYGMKDAPLSACQEHKRVGQYTTNRHGVLLIATRDGRAFRPSAVA------TAGPRP------GNSTAGA----------------------------------NRLGLFNGYDDGKPTSQHRPCLFPGCNARPEYGLPGAARAVYCFTHKKGSMVQLFQKALGLQDKAETTNVTAAIVSRNVAASESRTKAQAAAAGNKKTPLTSKITDKHEAKKARREPKVKWEDGSS------GERNSKKSRENCVR------------SALVERDLAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTNRSTEAAGMAPSAEILLLRQARETAKKEVEATGSGKRPRAPSRRALEASGRMNDQGAQWMTRKQKAEETRVKTELREKRKQSKAAGLKLGVVLEEII 1430
DP P+ RP A ++ TSS VS +++ P + +P T L A A RC+YP CP+ AKYG++DAP S CQ HKR GQYTTNRHG LL+ATRDG AFR AVA T P P G A A +R G + + Q+ CLFP C ARP YGLPGAARA YCF+HKKGSMV LF +A + + E VT A A +E + K Q G+++ +T D+ AKKARRE +K ++ + G R +KK R+N + A+V AG PT+R ++ GMAPS E+L+LRQARE AK E EA+GSG+RPRAPSRRALEASGR+ GAQWMTR++KAE+ RV +ELR+KRK+S+ AGLK+GVVLE +
Sbjct: 7 DPNPMSSRPKT-APADETRGTSSSLSPGVSPASSMSPPPTSTSSPKT--LQAPTAPRCEYPGCPKSAKYGLRDAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAVPVPAVTVPPSPASSEIAGTEAASAQPRRRSTGSTGSSVPSHRKPKAKLSSSVHALKRKSRPGTSSSRHEESRAPQYHSCLFPECGARPIYGLPGAARAAYCFSHKKGSMVDLFSEAPAVNNH-EAKRVTPA------APTEGKRKKQKK--GHEERKMTGMTADQRGAKKARRESSIKEDNKGATSKDDGGHRGAKKIRDNKTKVNGGMGASEASVGAIVTAAAAG---TSEMSTKSPAAKPSVKPTRKVKEPADTIVPPPQPTSRPSD--GMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEAFV 463
BLAST of mRNA_P-littoralis_Contig112.98.1 vs. uniprot
Match: A0A6H5KLI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI4_9PHAE) HSP 1 Score: 259 bits (663), Expect = 4.260e-74 Identity = 178/428 (41.59%), Postives = 226/428 (52.80%), Query Frame = 3
Query: 345 VLNARKATRCQYPACPRYAKYGMKDAPLSACQEHKRVGQYTTNRHGVLLIATRDGRAFRPSAVATAGP---------------------RPGNSTAGA-------------------------NRLGLFNGYDDGKPTSQHRPCLFPGCNARPEYGLPGAARAVYCFTHKKGSMVQLFQKALGLQDKAETTNVTAAIVSRNVAASESRTKAQAAAAGNKKTPLTSKITDKHEAKKARREPKV--------KWEDGSSGERNSKKSRENCVRSALVERDLAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA------------PTNRSTEAAGMAPSAEILLLRQARETAKKEVEATGSGKRPRAPSRRALEASGRMNDQGAQWMTRKQKAEETRVKTELREKRKQSKAAGLKLGVVLEEII 1430
L KA RC+YP CP+ AKYG+++AP S CQ HKR GQYTTNRHG LL+ATRDG AFR AVA P RP + G+ NR G + + P ++R CLFPGC ARP +GLPGAARAVYCF+HKKGSMV LF +AL + + E + +AA +E + K Q A K+ +T D+ AK+ARRE + +DG G R +KK R+N + V R + A PT+R ++ GMAPS E+L+LRQARE AK E EA+GSG+RPRAPSRRALEASGR+ GAQWMTR++KAE+ RV +ELR+KRK+S+ AGLK+GVVLE +
Sbjct: 106 TLPVPKAPRCEYPGCPKSAKYGLREAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAVPVPAVTVPPSPASSEIAGTEAASARPRRRSTGSSGSSVPSHRKPKENLSSSVHTLKRKNRPGTSSSRHEESPAPKNRSCLFPGCGARPTHGLPGAARAVYCFSHKKGSMVDLFSEALAVNNHEEKSVTSAA-------PTEGKKKKQTQA--KKEREMTGMTADQRGAKQARRESSIMEGNKGTTSKDDG--GHRGAKKIRDNETK---VNRGMGASGGSVGAIATAAAAGTSEMSVKSPAAKPLVKSTSEAKEPADTTAPPPQPTSRPSD--GMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEAFV 517
BLAST of mRNA_P-littoralis_Contig112.98.1 vs. uniprot
Match: A0A6H5L360_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L360_9PHAE) HSP 1 Score: 247 bits (630), Expect = 2.010e-69 Identity = 193/489 (39.47%), Postives = 243/489 (49.69%), Query Frame = 3
Query: 186 THEEYDPYPLRPRPDADATSENA-----HRTSSP------------PRVLVSSSNTSFPRSA---PSEAPPTGVLNARKATRCQYPACPRYAKYGMKDAPLSACQEHKRVGQYTTNRHGVLLIATRDGRAFRPSAVATAG--------------------PRPGNSTAG---------------------ANRLGLFNGYDDGKPTSQHRPCLFPGCNARPEYGLPGAARAVYCFTHKKGSMVQLFQKALGLQDKAETTNVTAAIVSRNVAASESRTKAQAAAAGNKKTPLTSKITDKHEAKKARREPKVKWEDG---SSGERNSKKSRENCVRSALVERDLAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--APTNRSTEAAGMAPSAEILLLRQARETAKKEVEATGSGKRPRAPSRRALEASGRMNDQGAQWMTRKQKAEETRVKTELREKRKQSKAAGLKLGVVLEEIIGGAAGTAA 1454
T E PYPLRPRP A + A S P P V V S++ S P P++ PP + CQ+ C A+YG D+P ACQ HKRVGQ+TTNRHG L ATR+G AFR A AT P G+S A ANR G+ G++ G +S++R CLFPGC+ARP+YGLPGA RA+YCF HKK MVQLF++ L +KA N T S+ AA + A + P D++ AKKARR P+ ED S G+ SKK R + +D GG + NR +++GMAPS E L+LRQARE AK E EA+G G+RPRAPSRRALEA+GR+ GAQWM+R++KAE+ R+K ELR +RKQ +AAGLK GVVLE + A GT A
Sbjct: 86 TKEGSGPYPLRPRPTHGAVVKQALSIFKSSASQPSXXXXXXXXXGGPGVRVLSTSPSSPAHTAVPPAKEPPIPM-------HCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTNRHGALFRATREGNAFRKLAAATVKSPPPCSINKGDLVASDQSRLPSTGSSGASSSSSHPKPEETSGTRGQVLKRANRQGISGGHNGGSQSSRNRTCLFPGCDARPDYGLPGATRAMYCFAHKKAPMVQLFKELPALPNKAG--NATTGKRSQGPAAXXXXXXXXSVGANKTRAPSN---IDRNGAKKARRGPQETEEDNDVDSGGKHTSKK------RRSTGGKDERGGISSAKVTGENLTKPTVKTSASSLPPPAPAFEPNPPSSSNNRLADSSGMAPSVEFLVLRQAREAAKTEAEASGLGRRPRAPSRRALEAAGRLKGIGAQWMSREKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFVPAATGTEA 556
BLAST of mRNA_P-littoralis_Contig112.98.1 vs. uniprot
Match: A0A6H5LLY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLY6_9PHAE) HSP 1 Score: 235 bits (599), Expect = 5.330e-65 Identity = 187/473 (39.53%), Postives = 231/473 (48.84%), Query Frame = 3
Query: 204 PYPLRPRPDADATSENA-----HRTSSPPRVLVSSSNTSFPRSAPSEAPPTGVLNARKATRCQYPACPRYAKYGMKDAPLSACQEHKRVGQYTTNRHGVLLIATRDGRAFRPSAVATAG----------------------------------PRPGNS--TAG-----ANRLGLFNGYDDGKPTSQHRPCLFPGCNARPEYGLPGAARAVYCFTHKKGSMVQLFQKALGLQDKA--ETTNVTAAIV----SRNVAASESRTKAQAAAAGNKKTPLTSKITDKHEAKKARREPKVKWED----GSSGERNSKKSRENCVRSALVERDLAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTNRSTEAAGMAPSAEILLLRQARETAKKEVEATGSGKRPRAPSRRALEASGRMNDQGAQWMTRKQKAEETRVKTELREKRKQSKAAGLKLGVVLEEIIGGAAGTAA 1454
PYPLRPRP A + A S P R + + S SA + PP L RCQ+ C A+YG D+P CQ HKRVGQ+TTNRHG L ATR+G AFR A ATA P+PG + T G ANR GL G + +S+ CLFPGC+ARP+YGLPGA RAVYCF+HKKG MVQLF++ L D A TT + V S G KK I D++ AK ARR + ED GS ++ K+S + G P NR +++GMAPS E L+LRQARE AK E EA+G G+RPRAPSRRALEA+GR+ GAQWM+R++KAE+ R+K ELR +RK+ +AAGLK GVVLE + A GT A
Sbjct: 92 PYPLRPRPTHGAVVKQALSVLKSSASHPGRAGMPVLSASPSSSAHTSVPPAKELPI--PVRCQHRGCSNLARYGPLDSPPCTCQLHKRVGQFTTNRHGALFRATREGNAFRKLAAATAKSPPPCSINKGNLAASDQSRLPSTGSSGAPSSSSHPKPGKTSGTRGQVLKRANRPGLSGGNNRESQSSRDSACLFPGCDARPDYGLPGATRAVYCFSHKKGPMVQLFKETPALPDSAGKATTGKPRSQVPTESSXXXXXXXXXXXXXXXXXGAKKKRAPRNI-DRNGAKNARRGRQETEEDNNADGSGTHKSEKRSSGGKDERGAISSSTVTGENLTKTTAKPAASSLPSPAPAAEPKPPSF------PNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRLQRKRYQAAGLKSGVVLEMFVPAATGTEA 555
BLAST of mRNA_P-littoralis_Contig112.98.1 vs. uniprot
Match: D7G0U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U7_ECTSI) HSP 1 Score: 217 bits (553), Expect = 7.170e-61 Identity = 154/358 (43.02%), Postives = 193/358 (53.91%), Query Frame = 3
Query: 369 RCQYPACPRYAKYGMKDAPLSACQEHKRVGQYTTNRHGVLLIATRDGRAFRPSAVATAGPRPGNSTAGANRLGLFNGYDDGKPTSQH----RPCLFPGCNARPEYGLPGAARAVYCFTHKKGSMVQLFQKALGLQDKAETTNVTAAIVSRNVAASESRTKAQAA-------AAGNKKTPLTSKITDKHEAKKARREPKVKWEDGS---SGERNSKKSREN------CVRSALVERDLAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTNRSTEAAGMAPSAEILLLRQARETAKKEVEATGSGKRPRAPSRRALEASGRMNDQGAQWMTRKQKAEETRVKTELREKRKQ 1382
RCQ+ C A+YG D+P ACQ HKRVGQ+TT+RHG L ATR+G AFR A AT P S +F G +S H R GC ARP+YGLPGA RAVYCF+HKKG MVQLF++ L +KA AA V A + R++ A + G KKT S I D++ +KKARR + ED SG SKK R + SA V ++ +P NR +++GMAPS E L+LRQARE AK E EA+G G+RPRAPSRRALEA+GR+ GAQWM+R++KAE+ RVK ELR++RKQ
Sbjct: 2 RCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRHGALFRATREGNAFRELAAATVKSPPPCS--------IFKGSSGRSSSSSHPMPGRTSATRGCEARPDYGLPGATRAVYCFSHKKGPMVQLFKEPPSLPNKAGQAESAAAPVVTRKATTGKRSQGPAXXXXXXXXSVGAKKTRAPSDI-DRNGSKKARRGQQETEEDNDADVSGTHRSKKRRSGGKDERGAISSAQVTKE-----------NLTKTTAKTSAPSLPSPAPAAEANPPSSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRVKAELRQQRKQ 339
BLAST of mRNA_P-littoralis_Contig112.98.1 vs. uniprot
Match: D7G0V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V0_ECTSI) HSP 1 Score: 208 bits (530), Expect = 1.700e-57 Identity = 149/323 (46.13%), Postives = 186/323 (57.59%), Query Frame = 3
Query: 513 AFRPSAVATA-GPRPGNSTAGANRLGLFNGYDDGKPTSQHRPCLFPGCNARPEYGLPGAARAVYCFTHKKGSMVQLFQKALGLQD---KAETTNVTAAIVSRNVAASESRTKAQAAAAGNKKTPLTSKITDKHEAKKARREPKVKWEDGS---SGERNSKK--SRENCVRSALVERDLAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTNRSTEAAGMAPSAEILLLRQARETAKKEVEATGSGKRPRAPSRRALEASGRMNDQGAQWMTRKQKAEETRVKTELREKRKQSKAAGLKLGVVLEEIIGGAAGTAA 1454
AFR A AT P P + GANR GL G++ G +S++R CLFPGC+ARP+YGLPGA RAVYCF+HKKG MVQLF++ L D KA T R+ A +E A AAA+ K P D++ AKKARR + ED SG SKK S R A+ +AG +P NR +++GMAPS E L+LRQARE AK E EA+G G+RPRAPSRRALEA+GR+ GAQWM+R++KAE+ R+K ELR++RKQ +AAGLK GVVLE + A GT A
Sbjct: 11 AFRELAAATVKSPPPCSINKGANRPGLSGGHNGGSQSSRNRSCLFPGCDARPDYGLPGATRAVYCFSHKKGPMVQLFKETPALPDNPGKATTGKP------RSQAPTEP---AAAAASVGTKNPRAPSNIDRNAAKKARRGQQETEEDNDADVSGTHRSKKRSSGGKDERGAISSSTVAG-------ENLTKTTAKTSAPSFPSPAPAAEANPPSSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPEATGTEA 317
BLAST of mRNA_P-littoralis_Contig112.98.1 vs. uniprot
Match: D8LH07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH07_ECTSI) HSP 1 Score: 186 bits (473), Expect = 1.190e-49 Identity = 128/300 (42.67%), Postives = 165/300 (55.00%), Query Frame = 3
Query: 576 NRLGLFNGYDDGKPTSQHRPCLFPGCNARPEYGLPGAARAVYCFTHKKGSMVQLFQKALGLQDKAETTNVTAAIVSRNVAASESRTKAQAAAAGNKKTPLTSKITDKHEAKKARREPKVKWEDGSS------GERNSKKSRENCVR---------SALVERDLAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTNRSTEAAGMAPSAEILLLRQARETAKKEVEATGSGKRPRAPSRRALEASGRMNDQGAQWMTRKQKAEETRVKTELREKRKQSKAAGLKLGVVLEEII 1430
NR G + + P Q+RPCLFPGC ARP YGLPGAA AVYCF+HKKGSMV LF +A + + E AA +E + K +K +T D+ AKKARRE +K ++ + G R +KK+R N + ++ + A PT+R +E GMAPS E+L+LRQARE AK E EA+G G+R RAPSRRALEASG++ GAQWMTR++KAE+ RV TELREKRK+S+ AGLK+GVVLE +
Sbjct: 75 NRPGTSSSGHEESPAPQNRPCLFPGCGARPIYGLPGAAHAVYCFSHKKGSMVNLFSRAPAVNNHEEKMVTPAA-------PTEGKRKXXXXXXXXRK--MTGMTADQRGAKKARRESSIKEDNKGATSKDDGGHRGAKKNRGNETKVNRGTGASEGSVGDVATAAAAGTSEMSTKLPAAKPLVKLTSKAEEPADTMAPPPQPTSRPSE--GMAPSVEMLILRQAREAAKTEAEASGGGRRARAPSRRALEASGQLKGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEAFV 363
BLAST of mRNA_P-littoralis_Contig112.98.1 vs. uniprot
Match: D7G084_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G084_ECTSI) HSP 1 Score: 150 bits (380), Expect = 1.250e-34 Identity = 125/383 (32.64%), Postives = 188/383 (49.09%), Query Frame = 3
Query: 354 ARKATRCQYPACPRYAKYGMKDAPLSACQEHKRVGQYTTNRHGVLLIATRDGRAFRPSAVATAGP------------------------RPGNSTAGANRLGLFNGYDDGKPTS-QHRPCLFPGCNARPEYGLPGAARAVYCFTHKKGSMVQLFQKALGLQ-DKAETTNVTAAIVSRNVAASESRTKAQAAAAGNKKTPLTSKITDKHEAKKARREPKVKWEDGSSGERNSKKSRENCVRSALVERDLAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTN-RSTEAAGMAPSAEILLLRQARETAKKEVEATGSGKRPRAPSRRALEASGRMNDQGAQWMTRKQKAEETRVKTELREKRKQSKAAGLKLGVVLE 1421
A + C++ C R +YG K+ PL+ CQ HKR G YT R GVLL+ATRDG AFR A +++ +P G +R + + + + S ++RPCLFPGC+ RP YGL RAVYC +HKK MV L ++A L+ ++ + V ++A +S + A G+ + L + K + KA+RE K GS G+ +KK +N S P++ R+ + +APS ++ LL+ AR++A +E A+GSG+R R PSR+ LEASG+M + AQWMT+++K E+ R+ R +RK + AAGLK+G V+E
Sbjct: 178 ASRTEYCKHTGCTRTPRYGRKNGPLTLCQSHKRAGLYTV-RDGVLLVATRDGSAFREKAGSSSSVNSNKNGTATGAAARRKCEAPDCTIQPSYGDPGTSRPRFCSSHKEKQMVSLKNRPCLFPGCDIRPHYGL-SMGRAVYCVSHKKDGMVHLLKEAKNLEKEELKRKRRECGEVEEDLADRDSGHDGEEQA-GSAEGSLQQR---KRKKXKAKREG-TKRSSGSHGKPTNKKKNKNTAAS---------------------------------------------PSHLRTAGQSALAPSDDMRLLQSARQSAHEE--ASGSGRRARVPSRKVLEASGKMAGETAQWMTKEKKEEQARINKRFRAQRKAAAAAGLKIGEVIE 506
BLAST of mRNA_P-littoralis_Contig112.98.1 vs. uniprot
Match: D8LEM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM4_ECTSI) HSP 1 Score: 133 bits (334), Expect = 2.530e-30 Identity = 79/122 (64.75%), Postives = 91/122 (74.59%), Query Frame = 3
Query: 1131 APTNRSTEAAGMAPSAEILLLRQARETAKKEVEATGSGKRPRAPSRRALEASGRMNDQGAQWMTRKQKAEETRVKTELREKRKQSKAAGLKLGVVLEEIIGGAAGTAAT*ADAGCGFGGGLV 1496
+P NRS + AGMAPS E LLRQARE AKKE A+G G+RPRAPSRRALEASG++ GAQWMTR++KAEE R K ELRE+R+Q KAAGLK GVVLE + AAGT AG G GGG+
Sbjct: 168 SPPNRSGDTAGMAPSVEFHLLRQAREVAKKEAAASGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGT----AGDGVGGGVA 285 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig112.98.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig112.98.1 >prot_P-littoralis_Contig112.98.1 ID=prot_P-littoralis_Contig112.98.1|Name=mRNA_P-littoralis_Contig112.98.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=436bp MQQDNISGRVETHEEYDPYPLRPRPDADATSENAHRTSSPPRVLVSSSNTback to top mRNA from alignment at P-littoralis_Contig112:370115..377270+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig112.98.1 ID=mRNA_P-littoralis_Contig112.98.1|Name=mRNA_P-littoralis_Contig112.98.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7156bp|location=Sequence derived from alignment at P-littoralis_Contig112:370115..377270+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig112:370115..377270+ >mRNA_P-littoralis_Contig112.98.1 ID=mRNA_P-littoralis_Contig112.98.1|Name=mRNA_P-littoralis_Contig112.98.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1308bp|location=Sequence derived from alignment at P-littoralis_Contig112:370115..377270+ (Pylaiella littoralis U1_48)back to top |