prot_P-littoralis_Contig112.31.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig112.31.1
Unique Nameprot_P-littoralis_Contig112.31.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length607
Homology
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BLAST of mRNA_P-littoralis_Contig112.31.1 vs. uniprot
Match: A0A6H5KRP0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRP0_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 1.970e-47
Identity = 187/369 (50.68%), Postives = 212/369 (57.45%), Query Frame = 0 
Query:   78 DIHSMTAQSMLRCWNAVGERLAAAQKVVKEV--AVDTGGVAPLHASTATATAAPAGR-EDGRLKG---SKGPRSGGIRVGSG----PGSRARKGEV----MDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVVPVERLDWPSTIIPRTPYGVPLLLSCLSTLPDKLAAALQPSTTAPAXXXXXXXXXHAFQNTPALRNAXXXXXXXXXXXXDGSA--IGEGGLTAQVLHRLRREEVLREANLQDKARCEQTESVCRMYAEASKSVAEPRVTAANAIPKLKNAFRPERHHKEREMWRQELEEIEEEIAKAMP 430
            D+H++TAQSMLRCWNAVGERLAAA+KVV+EV                        GR EDGR KG    KGPR GGIR   G         + GE     MD                                                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VVP+ERLDWPST+IPRTPYGVPLLLSCLST PDKLAAAL PS ++            A                XXX    GS     E  L++++L  LR++E++REA LQD+ARCEQTESVCRMYAEASKSVAEPRV+AA+A  KLK  FR ER   ER +WRQEL+E+EE +AKAMP
Sbjct:  841 DVHALTAQSMLRCWNAVGERLAAARKVVREVNAGXXXXXXXXXXXXXXXXXXXXXGRAEDGRPKGVGGGKGPR-GGIRPTGGGXXXXXXXXKGGEAVDMDMDSDVSSCDESNNDNSPSRGAAHGQQRNATRKRKVSRELGPSNAASPFSNAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVVPMERLDWPSTVIPRTPYGVPLLLSCLSTYPDKLAAALYPSPSS-----RPNAGGEATTTVGVAETEPPGSEGXXXGCSSGSTSECSEWELSSKLLPNLRQQELVREATLQDRARCEQTESVCRMYAEASKSVAEPRVSAAHAAVKLKTVFRAERQEAERLLWRQELKEMEEAVAKAMP 1203
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BLAST of mRNA_P-littoralis_Contig112.31.1 vs. uniprot
Match: D8LJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU4_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 1.670e-40
Identity = 190/387 (49.10%), Postives = 217/387 (56.07%), Query Frame = 0 
Query:   58 SCG--AGGRGAPSMGSNVHEYRDIHSMTAQSMLRCWNAVGERLAAAQKVVKEVAVDTGGVAPLHASTATATAAPAGR---EDGRLKG---SKGPRSGGIRVGSGPG-SRARKG-EVMDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----SVVPVERLDWPSTIIPRTPYGVPLLLSCLSTLPDKLAAALQPSTTAPAXXXXXXXXXHAFQNTPALRNAXXXXXXXXXXXXDGSAIGEGGLTAQVLHRLRREEVLREANLQDKARCEQTESVCRMYAEASKSVAEPRVTAANAIPKLKNAFRPERHHKEREMWRQELEEIEEEIAKAMP 430
            SCG  A G G   +GSN     D+H++TAQSMLRCWNAV ERLAAA+ VV+EV                           EDGR +G    KGPR GGIR   G G +R+RKG E +D+                                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     VVPVERLDWPST+IPRTPY VPLLLSCLST PDK                                          XXXX      E  L++++L  LR++E++REANLQD+ARCEQTESV RMYAEASKSVAEPRV+AA+A  KLK  FR ER   ER +WRQEL+E+EE +AKAMP
Sbjct:  524 SCGDDASGEGL-LLGSNP----DVHALTAQSMLRCWNAVRERLAAARNVVREVNAGXXXXXXXXXXXXXXXXXXXXXXXAEDGRPRGVGGGKGPR-GGIRPAGGGGRARSRKGGEAVDMDVDSDVSSCDESNNDNSPPRGAAHGQQRNATRKRKASRVLGPSNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVVPVERLDWPSTVIPRTPYAVPLLLSCLSTYPDK----------------------------------------GGXXXXXXXXXSEWELSSKLLPSLRQQELVREANLQDRARCEQTESVSRMYAEASKSVAEPRVSAAHAAVKLKTVFRAERQEAERLLWRQELKEMEEAVAKAMP 864
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig112.31.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRP0_9PHAE1.970e-4750.68Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LJU4_ECTSI1.670e-4049.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 535..549
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 434..606
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..340

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig112contigP-littoralis_Contig112:61830..68978 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig112.31.1mRNA_P-littoralis_Contig112.31.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig112 60925..68988 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig112.31.1 ID=prot_P-littoralis_Contig112.31.1|Name=mRNA_P-littoralis_Contig112.31.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=607bp
MDIDVGVTGGNAAKEEGEGAALDKVSPLPPRSVPLSPPSSSGTATATVTV
TVTATTPSCGAGGRGAPSMGSNVHEYRDIHSMTAQSMLRCWNAVGERLAA
AQKVVKEVAVDTGGVAPLHASTATATAAPAGREDGRLKGSKGPRSGGIRV
GSGPGSRARKGEVMDVDVDSELSSGETSNDNDTDTASQSQGQRFRKRKLA
RILVTSNASSSSSAAAARRRGRKPEAGSGKGAGGGRAGGGASAAAAAAAA
ASVVPVERLDWPSTIIPRTPYGVPLLLSCLSTLPDKLAAALQPSTTAPAS
AAAAAAAGHAFQNTPALRNAAGGEEKEAGGGGDGSAIGEGGLTAQVLHRL
RREEVLREANLQDKARCEQTESVCRMYAEASKSVAEPRVTAANAIPKLKN
AFRPERHHKEREMWRQELEEIEEEIAKAMPPPLETGDNMDVGDAGDAACG
NIEAEAEAEAEAEAQGNGEGGADVGRGVAKGSKGKGRPKGRKAATRVYST
RDSCSSAASTAAPAAAEAAVESGVSPRTAGHAGSKLSPPPSQKQPANLGT
SAAAVGGRGTKDKDVTETSAVGARKGRSAKSGTRPPSPAVIGRRSSTRGD
ASRSKA*
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