prot_P-littoralis_Contig1118.1.2 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1118.1.2 vs. uniprot
Match: D7G4X2_ECTSI (Transcription initiation factor TFIID subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X2_ECTSI) HSP 1 Score: 1347 bits (3486), Expect = 0.000e+0 Identity = 757/1105 (68.51%), Postives = 839/1105 (75.93%), Query Frame = 0
Query: 1 MEAPKEQVAPLYQCLDLEVDVDRSLLRGRTSIWLRHFPSSGGRYDSYPAEVSLHCRQSNVRATKVNGCLCASTYLDSLEDVVSEDGYRDAETFDICFRAKLWASAQGHSGELKLQVPANAQKIPKLPPELPETAPPAAKTRREETARLIQVSRQMEERRDAKRKQGSRGGAVGFSPQSPDVSMMSPAYPSPASNAESPAGAXXXXXXXXXXXYDAGEMKSAAVEAHRKQKREEHARVICIEVEWELIEPQSGVVFKTARERFSGNHMYTTYSHAPIDMDGPRCWFPCIDHASILIAYDVTVRVTSPKITAAFNGKLVETIALDD-------VGDGNXXXXXXXXGSSRYTTCYRFATETLTAARAVGLAVGRFAAWNVPQAPRVKGLVLRASSAREGAGGKGGAVKAERRRAVDSSLSAAAGALLAHVPAAMSFLEAWLKADYPFKRCTQVFVEGLPDVFSPFGSLCLVKAELLCTEDDRIPDGDLPGDARLSVVEVLLYGWVSAALRLEGGKHRWLVHGIAGFLLMKFAAELRGEEEKQHRLWRAVQKAVVLDCDLGCPSISPPTADLYIPDAIDPATAFYLRLKAVLILHMAEVKLQPTDLQDALSQVMSPIAQHAKEEKADLTLRRQTSNFSVSRQSSTVSHHQEEQRLTRQVSMASAVN--GEGQREGTGXXXXXXXEEEVPGQFMQPLADTKFLLLVRTMAARGGHDLGKDLTEGFYHTWVVGQCVPYLRVGYHYKKKANVINLVVEQARFWTVVPPWMSGISCRGPLTVEIWESDSLGGGNGNGPRRFREQLPQSRDDTKTATHVETITRAVQSKSRRKRKPASSTPRNIPYPGSSFATPISPAGGSSVATQNGGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSREGGGDEEEVDPERQAMFQAQDSNPSPVLWVKVDPQLEWIMSVRMRKPWHQWVEQLFSDESVEAQCDALRGLVELPLPFELRNLELPVQAIAEAVRGKVSHTQMEHAPCVRKEASAAVALALWQNQHAPPHAGGFGESRETRAQNWRGLEHLLKAFAERFEQRDPKTPARSGRGLGIGTTLSG----DRKSALLLPNWFEDATEYRLKKALV 1092
MEAPKEQ+ PLYQCLDLEVD+D+S LRGRTSIWL H PS G R D YP E+ LHCRQ+ ++ATKVNGCLCASTYLDSLE+VVS +GYRDAE FDIC+RAKLWAS+Q ++GELK+QVPAN++KIP+LPP+LPETAP AA+ RR+ETARLI SRQ+EERR+AKRKQGSR G F+PQSP++SMMSPA+PSP SNA + A G ++SA VEAHR++KREEHA+VIC+EVEWEL+ P+SGVVFK ARE FS NHMYTTYSHAP+DMDGPRCWFPC+DHASILI+YDVTVRV SPKITAAFNG+L+E+I LDD VG + Y+TCYRF+TETLTAARAVGLAVGRFAAW+VPQ+PRVKGLVLRA+SA G GG+ G +K+ERRRAVD+SL A AG+LLAHVPAA+SFLE WLKADYPFKRCTQVFVEGLPDVF+PFGSLCL+KAELLCTEDDRIPDGDLPGDARLS VEVLLYGWVS ALRLEGGKHRWLVHGIAG LL KFAAELRGEEEKQHRLW AVQKAV LDCDLGCPSISPPTADLYIPDAIDPATA+Y RLKAVLILHMAEVK+QP D+QDAL VM PIA H +EEKADL LRRQTS FS+SRQ S++S Q L+RQ S SAV+ G+G T E+V GQFMQPL DT FLLLVRTMAARGGHDLGK+LTEGFYH WV GQC+PYLR + ++ QA TV+ W C P TA IT A Q XXXXXXXXXXXXXXXXXXXXXX EEEVDPE+QAMFQAQD N SPVLWVKVDPQLEW+MSVRMRKPWHQWVEQLF DESVEAQC+ALRGLVELPLPFELRN ELPVQAIAEAVRG+VSHTQMEHA CVRKEA AVALALWQNQHAPPHAGGFGES+ETRAQNWRGLEHLLKAFAERFEQRD K+PA SG LGIG +G +RKSALLLPNWFED+TEYRLKKAL+
Sbjct: 1 MEAPKEQLTPLYQCLDLEVDIDKSFLRGRTSIWLLHIPSHG-RGDCYPTEIKLHCRQNEIKATKVNGCLCASTYLDSLEEVVSPEGYRDAEAFDICYRAKLWASSQSNNGELKIQVPANSKKIPQLPPDLPETAPSAARARRDETARLIHKSRQVEERREAKRKQGSRSG---FAPQSPEISMMSPAHPSPGSNANMDSPAPMDVADSSDDDNYDGHVESATVEAHRQRKREEHAKVICVEVEWELLHPRSGVVFKAAREGFSANHMYTTYSHAPMDMDGPRCWFPCVDHASILISYDVTVRVASPKITAAFNGRLLESITLDDDXXXXGDVGVNGGTDGMAVGKRTSYSTCYRFSTETLTAARAVGLAVGRFAAWDVPQSPRVKGLVLRAASA--GGGGRSGTMKSERRRAVDNSLIAGAGSLLAHVPAAVSFLEDWLKADYPFKRCTQVFVEGLPDVFAPFGSLCLLKAELLCTEDDRIPDGDLPGDARLSAVEVLLYGWVSTALRLEGGKHRWLVHGIAGHLLTKFAAELRGEEEKQHRLWCAVQKAVALDCDLGCPSISPPTADLYIPDAIDPATAYYARLKAVLILHMAEVKVQPADMQDALGSVMRPIALHVREEKADLALRRQTSTFSLSRQPSSLSQGQ----LSRQASADSAVDKAGDGDDAATAAASSG---EQVGGQFMQPLTDTAFLLLVRTMAARGGHDLGKELTEGFYHQWVTGQCLPYLR----WSRRGC-------QASRATVLSRW----KCGSP----------------------------------TAWGAAMIT------------------------------------DPEAAVQGXXXXXXXXXXXXXXXXXXXXXXXXXXEV------------EEEVDPEKQAMFQAQDFNTSPVLWVKVDPQLEWMMSVRMRKPWHQWVEQLFCDESVEAQCEALRGLVELPLPFELRNSELPVQAIAEAVRGRVSHTQMEHASCVRKEA--AVALALWQNQHAPPHAGGFGESKETRAQNWRGLEHLLKAFAERFEQRDSKSPASSGMRLGIGHDEAGSGGGNRKSALLLPNWFEDSTEYRLKKALI 993
BLAST of mRNA_P-littoralis_Contig1118.1.2 vs. uniprot
Match: A0A6H5JGQ1_9PHAE (Transcription initiation factor TFIID subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ1_9PHAE) HSP 1 Score: 926 bits (2394), Expect = 0.000e+0 Identity = 477/629 (75.83%), Postives = 538/629 (85.53%), Query Frame = 0
Query: 1 MEAPKEQVAPLYQCLDLEVDVDRSLLRGRTSIWLRHFPSSGGRYDSYPAEVSLHCRQSNVRATKVNGCLCASTYLDSLEDVVSEDGYRDAETFDICFRAKLWASAQGHSGELKLQVPANAQKIPKLPPELPETAPPAAKTRREETARLIQVSRQMEERRDAKRKQGSRGGAVGFSPQSPDVSMMSPAYPSPASNAESPAGAXXXXXXXXXXXYDAGEMKSAAVEAHRKQKREEHARVICIEVEWELIEPQSGVVFKTARERFSGNHMYTTYSHAPIDMDGPRCWFPCIDHASILIAYDVTVRVTSPKITAAFNGKLVETIALDDVGDGNXXXXXXXXGS--------SRYTTCYRFATETLTAARAVGLAVGRFAAWNVPQAPRVKGLVLRASSAREGAGGKGGAVKAERRRAVDSSLSAAAGALLAHVPAAMSFLEAWLKADYPFKRCTQVFVEGLPDVFSPFGSLCLVKAELLCTEDDRIPDGDLPGDARLSVVEVLLYGWVSAALRLEGGKHRWLVHGIAGFLLMKFAAELRGEEEKQHRLWRAVQKAVVLDCDLGCPSISPPTADLYIPDAIDPATAFYLRLKAVLILHMAEVKLQPTDLQDALSQVMSPIAQHAKEEKADLTLR 621
ME PKEQ+ PLYQCLDLEVD+D+S LRGRTSIWL H PS G RYDSYP E+ LHCRQ++++ TKVNGCLCASTYLDSLE+VVS +GYRDAE FDIC+RAKLWAS+Q ++GELK+QVPAN+QKIP+LPP ETAP AA+ RR+ETARLI SRQ+EERR+ KRKQGSR G F+PQSP++SMMSPA+PSP SNA + A G ++SA VEAHR++KREEHA+VIC+EVEWEL+ P+SGVVFK ARE FS NHMYTTYSHAP+DMDGPRCWFPC+DHASILI+YDVTVRV SPKITAAFNG+L+E+ LDD DG XXXXX G+ + Y+TCYRF+TETLTAARAVGLAVGRFAAW+VP +PRVKGLVL+A+SA G GG+ G +K+ERRRAVD+SL AAAG+LLAHVPAA+SFLE WLKADYPFKRCTQVFVEGLPDVF+PFGSLCL+KAELLCTEDDRIPDGDLPGDARLS VEVLLYGWVS ALRLEGGKHRWLVHGIAG LL KFAAELRGEEEKQHRLWRAVQKAV LDCDLGCPSISPPT DLYIPDAIDPATA+Y RLKAVLILHMAEVK+QP D+QDAL VM PIA H ++ KADL LR
Sbjct: 1 MEGPKEQLTPLYQCLDLEVDIDKSFLRGRTSIWLLHIPSHG-RYDSYPTEMKLHCRQNDIKVTKVNGCLCASTYLDSLEEVVSPEGYRDAEAFDICYRAKLWASSQSNNGELKIQVPANSQKIPQLPP---ETAPSAARARRDETARLIHKSRQVEERRETKRKQGSRSG---FAPQSPEISMMSPAHPSPGSNANMDSPAPMDVADSSDDDNYDGHVESATVEAHRQRKREEHAKVICVEVEWELLHPRSGVVFKAAREGFSANHMYTTYSHAPMDMDGPRCWFPCVDHASILISYDVTVRVASPKITAAFNGRLLESTTLDD-DDGXXXXXXANGGTDGMAVRKRTSYSTCYRFSTETLTAARAVGLAVGRFAAWDVPHSPRVKGLVLKAASA--GGGGRAGTMKSERRRAVDNSLIAAAGSLLAHVPAAVSFLEDWLKADYPFKRCTQVFVEGLPDVFAPFGSLCLLKAELLCTEDDRIPDGDLPGDARLSAVEVLLYGWVSTALRLEGGKHRWLVHGIAGHLLTKFAAELRGEEEKQHRLWRAVQKAVALDCDLGCPSISPPTPDLYIPDAIDPATAYYARLKAVLILHMAEVKVQPADMQDALGSVMRPIALHVRDAKADLALR 619
BLAST of mRNA_P-littoralis_Contig1118.1.2 vs. uniprot
Match: A0A6H5JE17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE17_9PHAE) HSP 1 Score: 360 bits (923), Expect = 9.120e-107 Identity = 217/280 (77.50%), Postives = 229/280 (81.79%), Query Frame = 0
Query: 817 RKPASSTPRNIPYPGSSFATPISPAGGSSVATQNGGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSREGGGDEEEVDPERQAMFQAQDSNPSPVLWVKVDPQLEWIMSVRMRKPWHQWVEQLFSDESVEAQCDALRGLVELPLPFELRNLELPVQAIAEAVRGKVSHTQMEHAPCVRKEASAAVALALWQNQHAPPHAGGFGESRETRAQNWRGLEHLLKAFAERFEQRDPKTPARSGRGLGIGTTLSG----DRKSALLLPNWFEDATEYRLKKALV 1092
R+PASSTPRN PYPGS+ +S AG S XXXXXXXXXXXXXXXXXXXX EEEVDPE+QAMFQAQD N SPVLWVKVDPQLEW+MSVRMRKPWHQWVEQLF DESVEAQCDALRGLVELPLPFELRN ELPVQAIAEAVRG+VSHTQMEHA CVRKEA AVALALWQNQHAPPHAGGFGES+ETRAQNWRGLEHLLKAFAERFEQRD K+PA SG LGIG +G +RKSALLLPNWFED+TEYRLKKAL+
Sbjct: 5 RQPASSTPRNSPYPGSAS---MSTAGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDEV------------EEEVDPEKQAMFQAQDFNTSPVLWVKVDPQLEWMMSVRMRKPWHQWVEQLFCDESVEAQCDALRGLVELPLPFELRNSELPVQAIAEAVRGRVSHTQMEHASCVRKEA--AVALALWQNQHAPPHAGGFGESKETRAQNWRGLEHLLKAFAERFEQRDSKSPASSGMRLGIGHDEAGSGGGNRKSALLLPNWFEDSTEYRLKKALI 267
BLAST of mRNA_P-littoralis_Contig1118.1.2 vs. uniprot
Match: A0A836CI26_9STRA (Transcription initiation factor TFIID subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI26_9STRA) HSP 1 Score: 277 bits (709), Expect = 2.060e-73 Identity = 360/1204 (29.90%), Postives = 474/1204 (39.37%), Query Frame = 0
Query: 11 LYQCLDLEVDVDRSLLRGRTSIWLRHFPSSGGRYD----SYPAEVSLHCRQSNVRATKVNGCLCASTYLDSLEDVV-SEDGYRDAETFDICFRAKLWASAQG-HSGELKLQVPANAQKIPKLPPELPETAPPAAKTRREETARLIQVSRQMEERRDAKRKQGSRGGAVGFSPQSPDVSMMSPAYPSPASNAESPAGAXXXXXXXXXXXYDAGEMKSAAVEAHRKQKREEHARVICIEVEWELIEPQSGVVF-------KTARERFSGNHMYTTYSHAPIDMDGPRCWFPCIDHASILIAYDVTVRVTSPKITAAFNGKLVETIALDDVGDGNXXXXXXXXGSSRYTTCY------------------RFATETLTAARAVGLAVGRFAAWNVPQAPRVKGLVLRASSAREGAGGKGGAVKAE---------------RRRAVDSSLSAAAGALLAHVPAAMSFLEAWLKADYPFKRCTQVFVEGLPDVFSPFGSLCLVKAELLCTEDD-------RIPDGDLPGDARLSVVEVLLY----------------------------------------GWVSAALRLEGGKHRWLVHGIAGFLLMKFAAELRGEEEKQ---------HRLWRAVQKAVVLDCDLGCPSISPPTADLYIPDAIDPATAFYLRLKAVLILHMAEVKLQPTDLQDALSQVMSPIAQHAKEEKADLTLRRQTSNFSVSRQSSTVSHHQEEQRLTRQVSMASAVNGEGQREGTGXXXXXXXEEEVPGQFMQPLADTKFLLLVRTMAARGGHDLGKDLTEGFYHTWVVGQCVPYLRVGYHYKKKANVINLVVEQARFWTVVPPWMSGISCRGPLTVEIWESDSLGGGNGNGPRRFREQLPQSRDDTKTATHVETITRAVQSKSRRKRKPASSTPRNIPYPGSSFATPIS-PAGGSSVATQNGGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSREGGGDEEEVDPERQAMFQAQDSNPSPVLWVKVDPQLEWIMSVRMRKPWHQWVEQLFSDESVEAQCDALRGLVELPLPFELR---NLELP----VQAIAEAVRGKVSHTQMEHAPCVRKEASAAVALALWQNQHAPPHAGGFGESRETRAQNWRGLEHLLKAFAERFEQ------------RDPKTPARSGRGLGIGTTLSGDRKSALLLPNWFEDATEYRLKKALV 1092
L+Q L+L +D ++ L G++ IWLR P SG R D S PA VSLHCRQ + A KVN TY+D L VV E+ Y+DAETFD+ +R +L +A G ++G+ +L++ LP +L PP AKTR G + P P P+ SP + A + A V +EL EP +G+++ A R H TTY+H +D+DGPRCWFPC+D + +++ + + S XXXXXXXX FAT+T T AR VGLAVG F W P APR+ G L R RA + + LA + + ++F + WL DYPF+ T VFV GL +PFG L L++ ELLC D R+PD + GD +V E LL GW ALRL RWL H AG++L + RG + Q RLWR ++ + D +LG SI PP A LY P+A++ A R KA L+L M ++ LQ AL M +A XXXXXXX + G + F +V G +LR GY Y +++ + ++ V P W S RG L V + SD GGG R Q + D T +A + T V SK+RRKRK + + P T N XXXXXXXXXXXXXXXXXXXXX E +++ +AQD N +PVLWVK+DPQ W+ + MRKP +QWVEQLF D VEAQ DA+ L E PL + + + +P V+A+AE +RG+V+HTQMEHA VR A+AA ALA WQ+ HAP + W GL LL+ F ERF A+LLPNWF+DA EY LKKA V
Sbjct: 4 LHQRLELCMDFEKRGLVGKSLIWLRQ-PLSG-RPDASPGSGPAFVSLHCRQCYITAVKVNDEAATFTYMDMLRPVVVPENVYKDAETFDVLYRTQLLTAATGDNTGQPELRIA--------LPRKL--LRPPTAKTR----------------------------GTTAYVPPPP---APLPSTASPLAIARTRA------------------------------------------VSYELYEPAAGLIWCHGGNQSGPAARRLPA-HCRTTYAHGAVDVDGPRCWFPCVDAPAQSCVFELVLDLPSGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLXXPLPRARRLHFATDTCTTARGVGLAVGPFQHWVDPLAPRLHGYYLVPDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDRAEQVART------LAALRSVVTFAQEWLNVDYPFQTATHVFVGGLEGRHAPFGGLVLLRDELLCPIDPCAHAPPPRLPDDNAHGDTHAAVAEGLLLDKLLSPPSRPPLCXXXXXXXXXXXXXXXXXXXXXXXXXXLGWAQTALRLAHSFERWLHHAFAGYMLELYIEAKRGRDVAQVTARSDAQYARLWRLMEAVIARDAELGGASIRPPDAALYAPEALERGVARLTRAKAALLLLMLRARIGRDALQRALRARMDALAPXXXXXXXXXXX-------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYGAAAADEFCQQYVRGGGALHLRAGYAYNRRSRQAEVALQ-----AVAPAW-SAAEFRGELDVVV--SDVAGGGQ-VWEVEGRWQYTEKVDSTNSAPAMWGFT--VHSKARRKRKAPPHQHKFVMLXXXXXXXXXQQPRMRRDAETGNXXXXXXXXXXXXXXXXXXXXXXXXXAA-------------------ELESLVEAQDLNTTPVLWVKIDPQRRWLRRIMMRKPDYQWVEQLFQDNMVEAQLDAVNALAEPPLSAQAQIGGGIAVPAPLGVRALAECLRGRVAHTQMEHAAAVR--AAAAEALAAWQSAHAP--------ALHDAPPLWHGLAALLRFFGERFAAGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVLLPNWFDDADEYALKKAAV 1032
BLAST of mRNA_P-littoralis_Contig1118.1.2 vs. uniprot
Match: A0A7S0U8X1_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U8X1_HEMAN) HSP 1 Score: 62.0 bits (149), Expect = 5.840e-6 Identity = 53/193 (27.46%), Postives = 85/193 (44.04%), Query Frame = 0
Query: 906 DSNPSPVLWVKVDPQLEWIMSVRMRKPWHQWVEQLFSDESVEAQCDALRGLV-----ELPLPFELRNLELPVQAIAEAVRG-KVSHTQMEHAPCVRKEASAAVALALWQNQHAPPHAGGFGESRETRAQNWRGLEHLLKAFAERFEQRDPKTPARSGRGLGIGTTLSGDRKSALLLPNWFEDATEYRLKKALV 1092
D SP+LW++VDP++ WI V ++ WV QL+ D++V AQ +A+RGL + P P +R+L V++++E + ++ HT +A A Q + P AG GE W G+ LL R+ RD P PN F + +Y +KK+++
Sbjct: 343 DKYDSPLLWMRVDPEMLWIRKVDFKQSDFMWVYQLYKDKNVAAQIEAIRGLSSTIKQDQPPPDSVRSLL--VRSLSETLEDPQLFHTVRSYA-------------AKTLGQLSCPDAGPAGEGAGP--VRWIGVPALLNHIRRRYVDRDTGLPK----------------------PNNFSNVADYFVKKSVI 496
BLAST of mRNA_P-littoralis_Contig1118.1.2 vs. uniprot
Match: A0A834ZLQ6_9MAGN (Transcription initiation factor TFIID subunit 2 n=2 Tax=Magnoliopsida TaxID=3398 RepID=A0A834ZLQ6_9MAGN) HSP 1 Score: 59.3 bits (142), Expect = 5.250e-5 Identity = 87/341 (25.51%), Postives = 130/341 (38.12%), Query Frame = 0
Query: 263 SGNHMYTTYSHAPIDMDGPRCWFPCIDHASILIAYDVTVRVTSPKITAAFNGKLVETIALDDVGDGNXXXXXXXXGSSRYTTCYRFATETLTAARAVGLAVGRFAAWNVPQAPRVKGLVLRASSAREGAGGKGGAVKAERRRAVDSSLSAAAGALLAHVPAAMSFLEAWLKADYPFKRCTQVFVEGLPDV----FSPFGSLCLVKAELLCTEDDRIPDGDLPGDARLSVVEVLLYGWVSAALRLEGGKHRWLVHGIAGFLLMKFAAELRGEEEKQHRLWRA---VQKAVVLDCDLGCPSISPPTADLYIPDAIDPATAFYLRL---KAVLILHMAEVKLQP 593
+G H H + CWFPC+D+ S YD+ + V + + L + ++ DD R T YR A + + LAV F +P R GL+ A ++ R V SA S E +L A +PF QVFV P++ S S+ + +++L D+++ D + D R+ + L W + E WL+ GIAGFL F G E ++R ++A V KA V SIS DLY I Y ++ K+V IL M E ++ P
Sbjct: 333 TGIHFGNNVLHTDNQIRRAHCWFPCMDNNSQRCCYDLEITVAQNLVAVSNGSLLYQVLSKDD--------------PPRKTYVYRL--NVAVAPQWISLAVAPFEI--LPD--RHSGLLSHMCLAPN---------LSKLRNTVGFFHSA------------FSHYEDYLSASFPFGSYKQVFVA--PEIAISSLSLGASMSIFSSQVLY--DEKVIDQTI--DTRIKLAYALARQWFGVYITAEAPNDEWLLVGIAGFLTDLFIKRFLGNNEARYRRYKANCAVCKADVSGTTALSSSIS--VTDLYGTQCI----GLYGKIRSWKSVAILQMLEKQMGP 620
BLAST of mRNA_P-littoralis_Contig1118.1.2 vs. uniprot
Match: D2V9A2_NAEGR (Transcription initiation factor TFIID subunit 2 n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V9A2_NAEGR) HSP 1 Score: 58.5 bits (140), Expect = 9.220e-5 Identity = 75/345 (21.74%), Postives = 140/345 (40.58%), Query Frame = 0
Query: 266 HMYTTYSHAPIDMDGPRCWFPCIDHASILIAYDVTVRVTSPKITAAFNGKLVETIALDDVGDGNXXXXXXXXGSSRYTTCYRFATETLTAARAVGLAVGRFAAWNVPQAPRVKGLVLRASSAREGAGGKGGAVKAERRRAVDSSLSAAAGALLAHVPAAMSFLEAWLKADYP----FKRCTQVFVEGLPDVFSPFGSLCLVKAELLCTEDDRIPDGDLPGDARLSVVEVLLYGWVSAALRLEGGKHRWLVHGIAGFLLMKFAAELRGEEEKQHRLWRAVQKAVVLDCDLGCPSISPPTADLYIPDAIDPATAF--YLRLKAVLILHMAEVKLQPTDLQDALSQVM 604
HMYT M G RCWFPC+D S +++ + + + +G L++ + S T Y F T+++ + +V +AVG F L+L A + S + L V A+ FLE +L+ Y VF+E S F +CL+ + + E + I D D R+S+V ++ + + + WL+ GIAG+L ++ G+ K+ ++ +A ++ + SI T LYI + P+ YL K+ L+++M + ++ +++++ L++ +
Sbjct: 291 HMYTQSQ-----MQGARCWFPCVDLLSSFHSFEFEI-TSHAEAMIICSGDLIKQVE---------------NYSGTLKTSY-FKTKSIISPSSVCIAVGPFNISYSSLTLNSYDLILNAFY-------------------LPSYSLESIRHTLGFVKRALIFLEDYLEFKYKDLFNLNTLNIVFIENGYTKQSTFSGICLLDSNQMILEPNII---DTVQDNRMSLVRLITEQFFGNFIHSKTWSDYWLIEGIAGYLAYQYYESEFGQNAKRFKIMKAGKELL---------SIENHTQSLYIENYCHPSELLTEYLLKKSPLVIYMIDRQISTSNMRNLLNKFL 582 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1118.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 7
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig1118.1.2 ID=prot_P-littoralis_Contig1118.1.2|Name=mRNA_P-littoralis_Contig1118.1.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1092bpback to top |