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Homology
BLAST of mRNA_P-littoralis_Contig111.98.1 vs. uniprot
Match: D7FJV0_ECTSI (Ribosome production factor 2 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJV0_ECTSI) HSP 1 Score: 557 bits (1435), Expect = 3.140e-184 Identity = 307/354 (86.72%), Postives = 326/354 (92.09%), Query Frame = 3
Query: 3090 MSSRNIVPKQGNAKALRAKRKREPQVHENVKKAIIIKGRKTSQDVTAALKDIYRLKSPDAVMFSKKNDTNPMEDETSAEFLMSKNDCALFCFGSHNKKRPNNLVLGRTFDGHMLDMIEMGLVGYRGLGELSGLAKRVGSKPAFLFAGEKWGREETYQKLQNLLLDFFRGQIVNEVALAGLDHCVVCTAASDKVHVRHYHIGFQRSGSKVPNVGLKEMGPSLDLQIRRTSFAATDLCKASNKKPRVAEKRKVKNISENQFGDKLGRIHLGRQDLSSMKVRRVKALRTVGKKAV-AEGDGGADGGG-DAMEGITTTGEGXXXXXXXXXXXXXXXGATAASRAKRGTRRKNQERKLL 4145
M SRNI+PKQGNAKALRAKRKREPQVHEN K AIIIKGRKTSQDVT ALKDIYRLKSPDAVMFSKKNDTNPMEDETSAEFLMSKNDC+LFCFGSHNKKRPNN+VLGRTFDGHMLDMIE+GLV YRGLGEL+GLAKRVGSKPAF+F+GEKWGREE Y+KLQNLLLDFFRGQ+VNEVALAGLDHCVVCTAA DKV+VRHYHIGFQRSGSK+P+V LKEMGPSLDLQIRRTSFAA DL KAS KKPRVAE RK KN+S NQFGDKLGRIHLGRQDLSSMKVRRVKALRTVGK A EG+G DGGG D M+GITT+G G XXXXXXXXXXX ATAA+RAKRGTRRKN+ERK+L
Sbjct: 1 MPSRNIIPKQGNAKALRAKRKREPQVHENAKTAIIIKGRKTSQDVTDALKDIYRLKSPDAVMFSKKNDTNPMEDETSAEFLMSKNDCSLFCFGSHNKKRPNNVVLGRTFDGHMLDMIELGLVQYRGLGELAGLAKRVGSKPAFVFSGEKWGREEAYRKLQNLLLDFFRGQVVNEVALAGLDHCVVCTAAQDKVYVRHYHIGFQRSGSKIPSVDLKEMGPSLDLQIRRTSFAAKDLWKASVKKPRVAETRKTKNVSANQFGDKLGRIHLGRQDLSSMKVRRVKALRTVGKGAKEGEGEGAEDGGGGDPMDGITTSGTGSTXXXXXXXXXXX---ATAAARAKRGTRRKNKERKVL 351
BLAST of mRNA_P-littoralis_Contig111.98.1 vs. uniprot
Match: A0A835ZC15_9STRA (Ribosome production factor 2 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC15_9STRA) HSP 1 Score: 329 bits (843), Expect = 4.470e-99 Identity = 172/305 (56.39%), Postives = 221/305 (72.46%), Query Frame = 3
Query: 3090 MSSRNIVPKQGNAKALRAKRKREPQVHENVKKAIIIKGRKTSQDVTAALKDIYRLKSPDAVMFSKKNDTNPMEDETSAEFLMSKNDCALFCFGSHNKKRPNNLVLGRTFDGHMLDMIEMGLVGYRGLGELSGLAKRVGSKPAFLFAGEKWGREETYQKLQNLLLDFFRGQIVNEVALAGLDHCVVCTAASD-KVHVRHYHIGFQRSGSKVPNVGLKEMGPSLDLQIRRTSFAATDLCKASNKKPRVAEKRKVKNISENQFGDKLGRIHLGRQDLSSMKVRRVKALRTVGKKAVAE---GDGGADG 3992
M +NI PKQ RAK R P+V EN K A+ I+G+KTS+ ++ L D+YR+K P + M ++ND P +DET EFL +KND +LF FGSHNKKRPNN+VLGRTFDGH+LDM+EMG+ YRG+ E G AKRVGSKPA LF G+ W EE Y+KL+NLL+DFFRG +V+ V+LAGLDH +V TA + +RHY I F+RSG+KVP++ L+ MGP DL +RR FAATDL K + +KP+ + +KVKN++ N F + +GRIHLGRQDLSSM VRRVKALR+ GK+ E G+G A G
Sbjct: 1 MPRQNIAPKQDKGHVRRAKEARAPKVVENTKTALCIRGKKTSESISTLLTDMYRMKKPFSRMLGRRNDLTPFDDETGIEFLTTKNDSSLFLFGSHNKKRPNNIVLGRTFDGHILDMMEMGVTAYRGIDEFRGSAKRVGSKPAMLFEGDLWENEEKYRKLRNLLIDFFRGDVVDSVSLAGLDHVMVVTAVEGGPILLRHYLIAFKRSGTKVPHIQLERMGPHADLVLRRVKFAATDLWKVATRKPKQLKPKKVKNVTSNTF-ETVGRIHLGRQDLSSMNVRRVKALRSGGKRKRGEEGAGEGAAGG 304
BLAST of mRNA_P-littoralis_Contig111.98.1 vs. uniprot
Match: A0A7S2UZD7_9STRA (Ribosome production factor 2 homolog n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZD7_9STRA) HSP 1 Score: 306 bits (785), Expect = 4.880e-91 Identity = 154/288 (53.47%), Postives = 212/288 (73.61%), Query Frame = 3
Query: 3090 MSSRNIVPKQGNAKA--LRAKRKREPQVHENVKKAIIIKGRKTSQDVTAALKDIYRLKSPDAVMFSKKNDTNPMEDETSAEFLMSKNDCALFCFGSHNKKRPNNLVLGRTFDGHMLDMIEMGLVGYRGLGELSGLA-KRVGSKPAFLFAGEKWGREETYQKLQNLLLDFFRGQIVNEVALAGLDHCVVCTAASDKVHVRHYHIGFQRSGSKVPNVGLKEMGPSLDLQIRRTSFAATDLCKASNKKPRVAEKRKVKNISENQFGDKLGRIHLGRQDLSSMKVRRVKALR 3944
M + I PK+ KA +R +R+R P++ EN K +++++G KTSQ + ALKDI+R+K+P + M S+ ND +P EDE+ EFL KNDC+LF FGSHNKKRP+NLVLGRT+DG +LDM E+G+ ++ + E A KR+GSKP +F G++W E + L+NLLLDFFRG V+ VAL GLDH + CTA KV++RHYHI F++SG K+P V L+ GPSLDL +RR+ + DL +A+ K+P+ +KVKN+++N+ GDK+GRIHLGRQDLSSMKV++VKALR
Sbjct: 1 MGKQTIQPKETRKKARVIRMQRERAPKLKENTKSSLVLRGNKTSQIIFEALKDIHRVKNPHSRMLSRNNDIHPFEDESKMEFLCEKNDCSLFAFGSHNKKRPHNLVLGRTYDGRLLDMFELGVEKFKSVVETKAKAPKRIGSKPCIVFQGDEWEVEGPLKSLKNLLLDFFRGDEVDSVALPGLDHVMACTAVGGKVYLRHYHIAFKKSGGKIPRVQLESTGPSLDLVLRRSKLPSPDLWRAACKQPKQLRPKKVKNVTKNEMGDKVGRIHLGRQDLSSMKVKKVKALR 288
BLAST of mRNA_P-littoralis_Contig111.98.1 vs. uniprot
Match: A0A8K1FC18_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FC18_PYTOL) HSP 1 Score: 275 bits (704), Expect = 1.920e-79 Identity = 140/280 (50.00%), Postives = 195/280 (69.64%), Query Frame = 3
Query: 3111 PKQGNAKALRAKRKREPQVHENVKKAIIIKGRKTSQDVTAALKDIYRLKSPDAVMFSKKNDTNPMEDETSAEFLMSKNDCALFCFGSHNKKRPNNLVLGRTFDGHMLDMIEMGLVGYRGLGELSGLAKRV-GSKPAFLFAGEKWGREETYQKLQNLLLDFFRGQIVNEVALAGLDHCVVCTAASDKVHVRHYHIGFQRSGSKVPNVGLKEMGPSLDLQIRRTSFAATDLCKASNKKPRVAEKRKVKNISENQF-GDKLGRIHLGRQDLSSMKVRRVKALR 3944
PK+ A +RA + +EP++ EN K +I++G KTS +V L+D+ LK+PDA M KKND +P +DET EFL KND +LF GS+ KKRPNNLVLGRTFDGH+LD++E+ ++ + + +K+ GSKPAF+F G++W ET+ KL+NLL+D FRG ++ ++ + G+DH +VCTA +KV R Y I F+++ P V L+EMGP DL RR A+ DL KA+ KKP+ +K+KNIS ++ GDKLGRIHLG+QD+ SM+ RRVKALR
Sbjct: 40 PKRQKAHVVRAIKNKEPKLVENTKGLLIMRGNKTSDEVNKLLRDLRMLKAPDAKMMGKKNDIHPFDDETKIEFLTQKNDTSLFMVGSNTKKRPNNLVLGRTFDGHILDIMELEFSNFKSIDDFKCKSKKAPGSKPAFVFTGDQWESNETFAKLKNLLIDVFRGTVIEQINVKGIDHAIVCTAWKEKVFFRSYSIDFKKADGVHPRVELEEMGPRFDLHFRRQKLASADLMKAATKKPKGLAPKKIKNISRDELTGDKLGRIHLGKQDIYSMQSRRVKALR 319
BLAST of mRNA_P-littoralis_Contig111.98.1 vs. uniprot
Match: A0A8J1XIG3_OWEFU (Ribosome production factor 2 homolog n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XIG3_OWEFU) HSP 1 Score: 273 bits (698), Expect = 5.000e-79 Identity = 142/293 (48.46%), Postives = 198/293 (67.58%), Query Frame = 3
Query: 3099 RNIVPKQGNAKALRAKRKREPQVHENVKKAIIIKGRKTSQDVTAALKDIYRLKSPDAVMFSKKNDTNPMEDETSAEFLMSKNDCALFCFGSHNKKRPNNLVLGRTFDGHMLDMIEMGLVGYRGLGELSGLAKRVGSKPAFLFAGEKWGREETYQKLQNLLLDFFRGQIVNEVALAGLDHCVVCTAASDKVHVRHYHIGFQRSGSKVPNVGLKEMGPSLDLQIRRTSFAATDLCKASNKKPRVAEKRKVKNISENQFGDKLGRIHLGRQDLSSMKVRRVKALRTVGKKAVAEGD 3977
R I PK N + R KR+PQVHEN K+A+ I+G TS+ VT ALKD+Y LK D+ M KKN P ED TS EF SKND +LF FGSH KKRPNNLVLGR FD H+LDM+E+G+ ++ + + G+KP LF+GE + + Y++L+N+L+DFFRG V + LAGL+H + T A K+++R Y I ++SGS+ P + L+EMGPSLDL +RRT A+ DL K + K+P+ A+ +K KNIS++ FG +LGRIH+ +QD++ ++ R++K L+ K AE D
Sbjct: 5 RIIKPK--NQRVKRVLEKRQPQVHENTKQAMFIRGGHTSETVTEALKDLYSLKKTDSTMLQKKNILRPFEDMTSLEFFSSKNDASLFMFGSHQKKRPNNLVLGRFFDHHLLDMVELGIDKFKSMAQFKCDKCATGTKPCLLFSGEAFDTDHEYKRLKNMLIDFFRGPTVENIRLAGLEHVLNFTVADGKLYIRSYRILLKKSGSRTPRIELEEMGPSLDLTMRRTKLASADLYKTARKQPKTAKPKKRKNISKDVFGTRLGRIHMEKQDMTKLQTRKMKGLKR--KPIAAEDD 293
BLAST of mRNA_P-littoralis_Contig111.98.1 vs. uniprot
Match: A0A2D4BFM4_PYTIN (Ribosome production factor 2 homolog n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFM4_PYTIN) HSP 1 Score: 274 bits (700), Expect = 5.750e-79 Identity = 141/280 (50.36%), Postives = 191/280 (68.21%), Query Frame = 3
Query: 3111 PKQGNAKALRAKRKREPQVHENVKKAIIIKGRKTSQDVTAALKDIYRLKSPDAVMFSKKNDTNPMEDETSAEFLMSKNDCALFCFGSHNKKRPNNLVLGRTFDGHMLDMIEMGLVGYRGLGELSGLAKRV-GSKPAFLFAGEKWGREETYQKLQNLLLDFFRGQIVNEVALAGLDHCVVCTAASDKVHVRHYHIGFQRSGSKVPNVGLKEMGPSLDLQIRRTSFAATDLCKASNKKPRVAEKRKVKNISENQF-GDKLGRIHLGRQDLSSMKVRRVKALR 3944
PK+ A +RA + REP++ EN KK ++++G KTS++VT L+D+ LK+P+ M SKKND +P +DET EFL KND +LF GSH KKRPNNLVLGRTFDGH+LDM+E+ Y+ + +K+ GSKP F+F G+ W E + KL+NLL+D FRG +V+ V + GLDH +VCTA D+V R Y I F+++ P V L EMGP DL RR A+ DL KA+ KKP+ +K+KNI+ ++ GDK+GRIHL +QD+ SM+ RRVKA R
Sbjct: 40 PKRQKAHVVRALKDREPKLVENTKKLLVMRGNKTSEEVTKLLRDLRMLKAPEVKMMSKKNDIHPFDDETKVEFLTQKNDTSLFMVGSHTKKRPNNLVLGRTFDGHILDMMELEFTNYKSIEAFQCKSKKAPGSKPCFVFTGDLWDTHELFGKLKNLLIDVFRGTVVDSVNVKGLDHAIVCTAWKDRVFFRSYSIAFKKAXGVHPRVELDEMGPRFDLHFRRHKLASADLLKAATKKPKGLAPKKIKNITRDELTGDKIGRIHLEKQDVYSMQSRRVKAXR 319
BLAST of mRNA_P-littoralis_Contig111.98.1 vs. uniprot
Match: D7FJU6_ECTSI (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU6_ECTSI) HSP 1 Score: 273 bits (697), Expect = 5.820e-79 Identity = 136/158 (86.08%), Postives = 147/158 (93.04%), Query Frame = 3
Query: 813 KAAADAGVKQFVFVSVHDYKAPSAVKKVGYFEGKRRTEKVIGELFGDNGVILKPAAIYGSRDVKLTGPKGNERTVNLPLQRVGRPLAKLTSTSIGKKIAESGLPLADVAWTQPLSTEEVARSAVKCCLEGADSVGGGRGKDSGDAVVLKVQDMAKIAA 1286
+AAADAGVKQFVFVSVHDYKAPSAVKKVGYF+GKRR EK+IGELFG GVILKPA IYGSRDVKLTGPKG ERTVN+PLQRVG PLAK+TST IGK+IA SGLPLADVAWTQPLST EVA+SAV+CCLEG DS+GGGRGKDSGDAVVLKVQDMA++ A
Sbjct: 147 EAAADAGVKQFVFVSVHDYKAPSAVKKVGYFDGKRRAEKLIGELFGAKGVILKPAFIYGSRDVKLTGPKGKERTVNIPLQRVGGPLAKITSTGIGKRIAGSGLPLADVAWTQPLSTAEVAKSAVRCCLEGTDSLGGGRGKDSGDAVVLKVQDMAQMTA 304
BLAST of mRNA_P-littoralis_Contig111.98.1 vs. uniprot
Match: UPI001458B1DE (ribosome production factor 2 homolog n=2 Tax=Pecten maximus TaxID=6579 RepID=UPI001458B1DE) HSP 1 Score: 271 bits (694), Expect = 2.340e-78 Identity = 131/264 (49.62%), Postives = 186/264 (70.45%), Query Frame = 3
Query: 3153 REPQVHENVKKAIIIKGRKTSQDVTAALKDIYRLKSPDAVMFSKKNDTNPMEDETSAEFLMSKNDCALFCFGSHNKKRPNNLVLGRTFDGHMLDMIEMGLVGYRGLGELSGLAKRVGSKPAFLFAGEKWGREETYQKLQNLLLDFFRGQIVNEVALAGLDHCVVCTAASDKVHVRHYHIGFQRSGSKVPNVGLKEMGPSLDLQIRRTSFAATDLCKASNKKPRVAEKRKVKNISENQFGDKLGRIHLGRQDLSSMKVRRVKALR 3944
REP++ EN K +I +KG TS VT A+K++Y LK P+AV + +KN P EDET EF K+D ALF FG H+KKRP+NL+LGR FD H+LDM E+G+ ++ + E+ G GSKP LFAGE + ++ +++L+NL +DFFRG IV+++ LAGL+H + TA K+ +R+Y I ++SGSK P V L++MGPSLD IRRT A+ DL K S ++P+ A+ RK+KN+S N FG KLGRIH+ +QDL ++ R++K L+
Sbjct: 21 REPKITENTKTSIFVKGGNTSMTVTQAMKELYLLKKPNAVSYKRKNILRPFEDETPLEFFAKKSDAALFAFGCHSKKRPDNLILGRMFDFHILDMFELGIENFKSMYEMQGAKSNTGSKPCLLFAGEAFDQDTEHRRLKNLFIDFFRGPIVSQLRLAGLEHVIQITALDGKILLRNYKIKMKKSGSKTPRVELEDMGPSLDFVIRRTKLASDDLYKRSLRQPKTAKPRKIKNVSHNPFGSKLGRIHMDKQDLGKLQTRKMKGLK 284
BLAST of mRNA_P-littoralis_Contig111.98.1 vs. uniprot
Match: A0A1V9ZW29_9STRA (Ribosome production factor 2 homolog n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZW29_9STRA) HSP 1 Score: 271 bits (693), Expect = 4.130e-78 Identity = 139/282 (49.29%), Postives = 192/282 (68.09%), Query Frame = 3
Query: 3105 IVPKQGNAKALRAKRKREPQVHENVKKAIIIKGRKTSQDVTAALKDIYRLKSPDAVMFSKKNDTNPMEDETSAEFLMSKNDCALFCFGSHNKKRPNNLVLGRTFDGHMLDMIEMGLVGYRGLGELSGLAKRV-GSKPAFLFAGEKWGREETYQKLQNLLLDFFRGQIVNEVALAGLDHCVVCTAASDKVHVRHYHIGFQRSGSKVPNVGLKEMGPSLDLQIRRTSFAATDLCKASNKKPRVAEKRKVKNISENQF-GDKLGRIHLGRQDLSSMKVRRVKALR 3944
I PK+ AK RA + +EP++ EN K+ ++++G KT++DV L+D+ +K+PD+ +KKN+ +P +D S EFL +KND +LF GS KKRPNN++ GRTFDGH++DMIEMG ++ + + +K GSKP F+F+G +W E YQKL+N+LLD FRG I V L GLDH +VC+AA ++V RHY I F S P V L EMGP DL RR FA+ DL KA+ KKP+ +K+KN++ ++ GDK+GRIH+ RQD+ SM VRRVKALR
Sbjct: 31 IKPKRVKAKVARAIKHKEPKLVENTKQLLVLRGNKTNEDVNNLLRDLRMIKAPDSKSLAKKNELHPFDDANSVEFLTTKNDTSLFLLGSSTKKRPNNIIFGRTFDGHLMDMIEMGFENFKSIDDFKIKSKMAPGSKPCFVFSGNEWETIEEYQKLKNILLDTFRGTITTGVNLKGLDHVIVCSAAKNRVLFRHYSIAFTLSNDTHPRVELDEMGPRFDLSFRRHKFASADLMKAALKKPKELAPKKIKNVTRDELTGDKIGRIHVDRQDIYSMNVRRVKALR 312
BLAST of mRNA_P-littoralis_Contig111.98.1 vs. uniprot
Match: A0A024TUU5_9STRA (Ribosome production factor 2 homolog n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024TUU5_9STRA) HSP 1 Score: 268 bits (685), Expect = 5.370e-77 Identity = 142/296 (47.97%), Postives = 196/296 (66.22%), Query Frame = 3
Query: 3105 IVPKQGNAKALRAKRKREPQVHENVKKAIIIKGRKTSQDVTAALKDIYRLKSPDAVMFSKKNDTNPMEDETSAEFLMSKNDCALFCFGSHNKKRPNNLVLGRTFDGHMLDMIEMGLVGYRGLGELSGLAKRV-GSKPAFLFAGEKWGREETYQKLQNLLLDFFRGQIVNEVALAGLDHCVVCTAASDKVHVRHYHIGFQRSGSKVPNVGLKEMGPSLDLQIRRTSFAATDLCKASNKKPRVAEKRKVKNISENQF-GDKLGRIHLGRQDLSSMKVRRVKALRTVG---KKAVAEGD 3977
I K+ A RA + +E ++ EN K+ ++++G KT++ V L+D+ +K+PDA + SKKN+ +P +D S EFL KND +LF GS KKRPNN++ GRTFDGH++DM+EMG ++ + E +K GSKP FLFAG +W + E YQKL+N+L+D FRG IV + L GLDH +VC+AA+++V RHY I FQ + P V L EMGP DL RR F + D+ K + KKP+ +KVKN+S ++ GDK+GRIHL +QD+ SM+VRRVKALR KKA A D
Sbjct: 33 IKAKRQKASVARAVKNKEAKLVENTKQLLVLRGNKTNESVNQLLRDLKMIKAPDAKVLSKKNELHPFDDPNSIEFLTHKNDTSLFVLGSSTKKRPNNIIFGRTFDGHIMDMLEMGFDNFKSIDEFKCKSKMAPGSKPCFLFAGAEWEQSEPYQKLKNVLVDIFRGTIVTAINLKGLDHVIVCSAANNRVLFRHYSIAFQLTTDTHPRVELDEMGPRFDLSFRRHKFGSADMMKVACKKPKELAPKKVKNVSRDELTGDKIGRIHLDKQDIYSMQVRRVKALRKSPGDLKKADASAD 328
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7FJV0 |
| PFAMs | Brix |
| Model size | 4148 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K14847 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000027,GO:0000463,GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004611,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0008964,GO:0009507,GO:0009536,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016829,GO:0016830,GO:0016831,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048046,GO:0048366,GO:0048367,GO:0048731,GO:0048827,GO:0048856,GO:0065003,GO:0070013,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0099402,GO:1901360,GO:1901363 |
| Exons | 13 |
| Evalue | 3.69e-199 |
| EggNOG OGs | COG5106@1|root,KOG3031@2759|Eukaryota |
| Ec32 ortholog description | Brix domain |
| Ec32 ortholog | Ec-10_000560.1 |
| Description | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
| Cds size | 1059 |
| COG category | O |
| BRITE | ko00000,ko03009 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789443.5526369-CDS-P-littoralis_Contig111:483499..483727 | 1680789443.5526369-CDS-P-littoralis_Contig111:483499..483727 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig111 483500..483727 - |
| 1680789443.562606-CDS-P-littoralis_Contig111:485190..485287 | 1680789443.562606-CDS-P-littoralis_Contig111:485190..485287 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig111 485191..485287 - |
| 1680789443.5709646-CDS-P-littoralis_Contig111:486091..486201 | 1680789443.5709646-CDS-P-littoralis_Contig111:486091..486201 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig111 486092..486201 - |
| 1680789443.579312-CDS-P-littoralis_Contig111:487165..487296 | 1680789443.579312-CDS-P-littoralis_Contig111:487165..487296 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig111 487166..487296 - |
| 1680789443.5875769-CDS-P-littoralis_Contig111:488734..488912 | 1680789443.5875769-CDS-P-littoralis_Contig111:488734..488912 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig111 488735..488912 - |
| 1680789443.60193-CDS-P-littoralis_Contig111:490111..490270 | 1680789443.60193-CDS-P-littoralis_Contig111:490111..490270 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig111 490112..490270 - |
| 1680789443.6103852-CDS-P-littoralis_Contig111:493149..493305 | 1680789443.6103852-CDS-P-littoralis_Contig111:493149..493305 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig111 493150..493305 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789443.6186812-UTR-P-littoralis_Contig111:493305..495284 | 1680789443.6186812-UTR-P-littoralis_Contig111:493305..495284 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig111 493306..495284 - |
| 1680789443.628562-UTR-P-littoralis_Contig111:495535..495689 | 1680789443.628562-UTR-P-littoralis_Contig111:495535..495689 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig111 495536..495689 - |
| 1680789443.6368392-UTR-P-littoralis_Contig111:496189..496416 | 1680789443.6368392-UTR-P-littoralis_Contig111:496189..496416 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig111 496190..496416 - |
| 1680789443.644961-UTR-P-littoralis_Contig111:497403..497567 | 1680789443.644961-UTR-P-littoralis_Contig111:497403..497567 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig111 497404..497567 - |
| 1680789443.6557865-UTR-P-littoralis_Contig111:498150..498255 | 1680789443.6557865-UTR-P-littoralis_Contig111:498150..498255 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig111 498151..498255 - |
| 1680789443.6699445-UTR-P-littoralis_Contig111:498629..498855 | 1680789443.6699445-UTR-P-littoralis_Contig111:498629..498855 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig111 498630..498855 - |
| 1680789443.6803024-UTR-P-littoralis_Contig111:501475..501709 | 1680789443.6803024-UTR-P-littoralis_Contig111:501475..501709 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig111 501476..501709 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig111.98.1 >prot_P-littoralis_Contig111.98.1 ID=prot_P-littoralis_Contig111.98.1|Name=mRNA_P-littoralis_Contig111.98.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=353bp
MSSRNIVPKQGNAKALRAKRKREPQVHENVKKAIIIKGRKTSQDVTAALK DIYRLKSPDAVMFSKKNDTNPMEDETSAEFLMSKNDCALFCFGSHNKKRP NNLVLGRTFDGHMLDMIEMGLVGYRGLGELSGLAKRVGSKPAFLFAGEKW GREETYQKLQNLLLDFFRGQIVNEVALAGLDHCVVCTAASDKVHVRHYHI GFQRSGSKVPNVGLKEMGPSLDLQIRRTSFAATDLCKASNKKPRVAEKRK VKNISENQFGDKLGRIHLGRQDLSSMKVRRVKALRTVGKKAVAEGDGGAD GGGDAMEGITTTGEGGGGGGGRGEGSSGEGGATAASRAKRGTRRKNQERK LL* back to topmRNA from alignment at P-littoralis_Contig111:483500..501709- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig111.98.1 ID=mRNA_P-littoralis_Contig111.98.1|Name=mRNA_P-littoralis_Contig111.98.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=18210bp|location=Sequence derived from alignment at P-littoralis_Contig111:483500..501709- (Pylaiella littoralis U1_48) GCCCATATCCCATAGCCCACACAGCAGTGGTGGGTCCTTCTTCGTCGGAG
AGACAATGAGATGGCTAGGCGCAGGGGTTGGCCTTGTGGCCCTGGCCATG
GAGGCCGGAGCGTTTCATATGGTGCCTCGGGCAAGTCTGAGCCGGCGGCA
GACTGCTTCTCCGACTTCGGTTGTTGCCACGACCCACTGGCGTGATTCTA
CAACAAGAAAAACAGAGGTCACCCGGCAGGGAAGGTGTGTACCTTGCTTT
TATGTTCGCCGTCCAACCCTCTTCTGTTTTTGCTGCTGTTGATTTGGTTG
GCTGTGGTGGTGGTAGAGATGTGTTTCGTATTATAGTTTGAGCGAAAACT
TGGTGTGACTCACATCTGCAAGTTGCGTTCAGGGCTGTTGTGGTGAGTAA
GCATTACTTCGAAAATGACACCCACTTGAAGGTACAATTCTATATTTTCG
CCGCCAGCTTTTTAGCCGGAGACACGCACAGCGTAGAGCCCGTTGCCACA
GCAGACAAGCAGCAAGAATTGAAGAGTATTGATTCTCTCCCAGTCAACAT
ACAGCAGCAGAGTTAAGGACAAACGGAGATTTGTAGTTTGCACAATATTG
GTGTTATACCACACTGTGTGTTGAGTGTGAGCGACTGCTGTGATTCACAG
GAACTGCGGACAGTCATGGTCGATACCTGTGCTGTAGTCGCGGGGATTTG
GGGAATGGGATTTCATGATCACGGCGAGGGTGTCAACGGCTAGACAGCAG
TTGGAACCAACACGAGTCGGAGTCAGGGTTGGCAACTCTCCAGATCATTA
AGACTTTCCCTCCTCCCCTGGAAGGACCAAGGCTGGCTTGCGACAATTCT
CAGCTGCGGCTCCCCCCTTCCCTCCGCACAGCTCGTAGCTATCATACTTT
CGAAGTTTACTTTTTCCGAAGCAGTGAATATCATAAGCTTGTTCCAACCC
CCGGACACGTGTGTTCATTGATTAAATGTCAAGCGCAGTCTCTGATAGTG
AACACACACAAACACACACACACACACACACACACACACAGACCCCGTCG
ATGGGCCTAGCCTGTAGTTTGAACCGCAGGGTGCAGACTAGTGTGCCAGA
GAATATGGGATGACAACACACACACACACACATGCGCGCGCGCACTGGTG
GGAGAATGAATGGGGGGCGTGAGGTTCTCGGGGGCACAACTGGTTGACTT
GCCGAGGCGTCTACCGAAGAACCTCAAAGCGTCCGGCATCGCCACCGACA
GGACAGGTACATGAGGGAAACGATTGTCGAGATAGCGGAAGAATGGCATG
ACAGGTACATGAGTGTGTGACGGTTCATGGACGAGTGGCACGAAGGACAG
GGAGGCGCCAAAAGATACAGCGAATCATACTGTGTACTTCGTTCATCGAA
AGAGGGAGAGGGACGCAGTCGAAGGACAGGCCACGGTAAAGAGGTGGAAA
AGGGACGGCGAGGAGAAACGATAGAACATGCACGGCCCCCCGGGGGGGGG
GTATATCCTCTTCCGACCCACGGGGGGCGGGTAAGCCCTCCACGCAGCAG
GGTGGTGGGTCGAAAGAGCACAAAGGCAGATGTTTTTGGGAGGGGTGTTG
CTGATAAACTGTGAGGCGAAAGAAGCAAACGAAGCTGCGGAGGGGTGGAG
GTAAAAAGGCTGTTGGCGGAAGTCGCGGGAGTGGTGTTGCTGCTAAAGGT
GCAGGGGCAGCAACAGCGTGTGGTGGTGTGGTGGTATGAGTGACAGGAAG
CATGGGTACGACAGAGGAGAGCAAGCGTGAACAGGCAGACGTTGTGGCGA
GAAGACACGTGTGCGACTGACTGCTGTGTGCACACCCGAGCTGTTCCCCT
CTATTTTTATTATTTTTCTCCTTCATTCTTCCTTTCCTCCTTTTCAGTTG
TTTCTTTTTCGTCTCCTAGTCTTTCACCTCTGTTTTTTTTCCTCTATTAT
TATCGAAATGCTCCCATTGTTGCACAAGAATTCTGTATTTCCGTATCCCT
TCTTGTTCTTTAACCATCACGTAAGATAGCCCCTGAGTGGGCGGTGTCCA
TTCCTGTTTTCTTCTCTTTTTCGTGTGTGGCCTTTTTTCATTTCAAATTA
AGATGTGCCCTGTTTGGTTTGGTGACCATGCGCTAGACTCTGGCGGAGAG
CTAACGTTCAAATCAACAATACACACGCACACGCACGCCCACACACCTGA
GACTCTACTCGCCCAAGGTATCCGACTTGATCAAATTTGGGCTGACAACG
ACGAAGGAGACAAATTGTGACGTAAAACATCCCAAAATTGCAGACGGGGG
AGCCACTGGACCGCGCGACACTTGCACTGCACTGCTGTACCCCAAGCACA
CCACACACAGCAAATACAGCGTGTAGCGTTGACGGCATTCACTTTCTGAT
GGGATTGATACGCCTCATCTCATGCCCCTTTTGCTTGCGACAAGCAGCGG
CTTCTTATTCTCCTTGAACTTCGAGGCCCACAGAGTGTTCATTATGCACG
AATGCTTCGACGCCCGATGTGACCGACCATTTCCGCCGCTGGCTGCTTGC
GGTGTCGTCTGGCAATTTTTCTGTTCGGGATTGACGCCCCATTACCAGTC
GGTGAAGGCGGTCGATGCCTGGTGTACCATATACCGAAAACACAAAAGCT
GAAGACGTGCAAGGTCAAGCAGGCTAGACTAGTGTTGTGGCACGCATGTA
TTCCTGAATATAATCTTGCACACGCAACACCGATGTTGTTTGCTTCATGT
ACCCGGTTCTAAGAGCCCATCTGGGACAACCAAACACCAAAACACGAGGG
CATATCACACAACAGCCACGTACGGCTGTTTCCCTTTCCACCTCTGTCCC
GCAGGGCTTTCCTGTCGTCCGCCTCGGACGCCGAGCAGCAGGAGAGCGTC
GACCCCCTCGACCAATTTCCAGAGCCGGTGCCAAAGCCTGAGACTTCGGG
GAAGGGGGACCTCACGCCGCCCACGGGCCCCCCCGCCGAGGAGGCGGACG
CGACTGTCATGGGGCCTTCCACTTCCACCGTTTTCGTGGCCGGTGGCTCC
GGCTTCGTGGGTTCGGAGATCTGCAGCCAGGTTTGAAAAAAAAGCGCGGA
TCATAGCGGAGACACGTGCGTTTGTGTGTTGAAGGCGATGGGCGGGGCTA
TACCGTAGGGCGAATAGGCAGAGAGATGCACGTAGACGGAGTCGCGGAGT
TCGATTAGGCGTAATATGCCCTCGCTTGTGGTTTCAATGACGTTTGATAT
CAACGCGGCTGATCACTTTTCTTTTCACTCCATTCTACCCCACAACCAAG
CCCACCCACCCTACCCGACTCCTCACCCCCATCCTTCCCGTTGTCCGCAT
GTGTGCGCTCGGTGATTGTCCGGCCGTTCGACCTTGTCGTTGGTTGTTAC
TGCCCGCGCGTTTGTGTGTGTGTGTGTGTGTGTTTTGTCGTCGGGTTGAT
GCAGCTCGTCGCCGCCGGGTGCAACGTGATCGCCCTCAGCCGCAAGGGGG
CCCCGGCGAACGCAGGGTCGTGGGCAAAGACCGTCAAGTGGGTCGAGGGT
AATGCGCTGGTGAGTGGGCATGGAGGAGGGCACATCAGTAGTACCGCAGT
AGTGGGTGTCACTTCTTGAAATAATGCCTCGGCAACAGCTGGAGTACCCC
CCCGCTCTCTCTCTTCCACTCTCTCGCTCATCCCAGGGGGTCATAACCCA
ACCATCCACCGAGGAACCAGGCAGTACCAAGTCATGTTGTCCAGACGACC
TCGCAGCTTATACGAGCCGCTATCGTTGACATTGCTCGCACCGCCTTGAG
CAATGTCAGCCCCGTGTCAAATGAGATACCCGGAGCAAAATGCCGCCCGT
TGGTGCGTCTCTTAGTCTAGCCGTTCTTGATGAACCGTATTTTCTCCTCG
TCAAATGCCTCGGGCCGCCACTTCATGCATTTCCGCCCCCCGAGCTCCAC
CGTCGTGTATTCCCAGCCATCGAGAGTAAGCACTACGCCGCAGCCCCCTC
AACACCACCGTCCTCCTATTCCGCACGTAGTTTCCAGTTTTTGAAGTATT
GAGCTATTGTTTTGCCTCGTTGTTCTCCCTGTCTGTCTGTCTGTCTGTCT
CTCCCACTTCCCACTCTCTCTATTTTTTGGTTTTTCTGCCAGAACCAAGA
CCTTTACCGCGCTGAGCTCCGCCAGTCCGACACGGTGGTGTCTTGCGTAG
GAGGGTTCGGGAAGACGGACGCCTACATGGGGCTCGTCAACGGCGAGGCG
AATATCAAGCTTGCTGAGGTTTGTGTGTTTGTGCGCGTGTGAGCGCATGT
TTGTGTGTCTCTGATTTCATGGGCAAAGACGGCGCAAACCTGTTCGCCAG
CGAGAACATGTTACGTATGAGTCGAAAACGAAGTACCTCCCATCAAACAA
GGTTCGTGGGTGTGGGTGCGTGTCGCAGAGATCGCCTTATTACCGGCGGA
CCGATTACAATATTTCAGTAATGTTTCATAACCGGGGTCGTGCTTGTATG
CGTGGACCAAAAATTCCTCATGCACTTGCCATCTCCATGATGACAAGGTT
TTTGGTACTTTTACCGCTTTCGCGCGAATTTTTGTGTGTGTGTGTGTGTA
TGTGTACATGTGTGTGTTGTCTCCATTCTGTCTCGGACGCGCGTCTTCAC
CAGGCTCACACCAGCCGGGGTTTACGCAGGAGGAAGGTCTCTCACACAAA
TATTCTTTTTTTCCTCGACCTTCTTTTTCCGGTGCCCACCTTACATTTTG
TCTCTGGAAGGACCCGGCTCTCGTTTTTTTACCCCTCGTCGACAATCCAA
TCGAAAATTGTTTGCTCAAGGAAATAGTGAAAAACCGTCGCTTGTTGTGA
GAAAGCGTTTCCAGTGCATGTGACTTGACCGAAATCCGGTCTCATCGTTG
TTCACAGCTGCTGTCAGGAGGTCTCCGAGGTTATCAACTGAACCGCCGGG
GAAACCCGTTATTAAAACCACTGGAACCCATCCTTTGAAGTAGACACACC
AGTATGTGCGTCATCACCAGGACCACTCCACGACCTACCACTATCCGTTG
AAGCGTCAAGAACGTGGCATGAAAAGTCGCTGTCGTTGTGGATCAATGAA
ATGATTCACCGAACGATGCTACCGGAAAGGCTCCACCTTTTTTCCTGGTG
ATGGCATAGAATGCCATCGCGTTGAGTAGGAACCTTCGGAAATAAAGCAA
CGAACGAAGTCACCGGAATCGCTCGACACTTTTCTCTGTGGATGGCATGC
TGCTGGTACATAAATGTGCATGTATAGAATGTAACAATTTTAGTCGAAAC
CGTTGGATATCAAACTCATCAAAATCACCTAACGAAATCACCTGGTCGGC
CTAAACGTACCCCTTTTTTTTTTTGAAAGGCCGCTGCAGATGCCGGCGTG
AAGCAGTTCGTGTTCGTGTCCGTGCACGACTACAAGGCGCCGTCGGCGGT
GAAGAAAGTGGGGTACTTCGAAGGAAAGCGGCGCACGGAGAAAGTCATCG
GGGAGCTGTTCGGTGACAACGTGAGAGAGAGAGGGAGAGAAAGTTGGTTG
CAGGCTTGGCGTTCTTGACATTTTCTTTTGTTTTCGCCCGAGCGTGTGTC
GTGTGTCGTGTGTCGTGTGTCGTGTGCCTCGTTTTTGAATCGGTTGTCCC
GTTTCGAGGTTTGAATCAGTCTACCTGGAAAGCAACATCACCATTAGTAT
CATCATCACTACTGTTTGTGCTCGTGTGCGTACCATGCGTATGACAGCGT
TCGTATGCGTGCGTCTTGAATATATTACGCGTGCTGAGAATCCAGTTGTA
CAGTTGTGGTGCGGAACGCCCCCCCCCCTCCGCCCGCCCAACCGCGCGGC
CTCTCCCGGCACTCGCCGCTAGCTCAATTGATGTATGGCTTGAGCTGTCT
GGCTGGAGGATGAGCTTATTTGCCGCCCATCATAACAGAACCAACGAACC
CTCAAACAATTTTGTTCCATTTCTTTGGACTGCTGCCCGTGGCGTGACGT
CAAATCTCCCATACATCCAGGGAGTGATTTTGAAGCCCGCGGCAATCTAC
GGCTCTCGCGACGTGAAGTTGACGGGCCCCAAGGGTAACGAGCGGACGGT
GAACCTGCCGCTGCAGCGCGTGGGTAGGCCGCTGGCAAAGCTGACGTCCA
CCAGCATCGGCAAGAAGATCGCAGGTAAGGAGGCCCCCTGCGTCGTTTGA
TAGGTTGGTAGGTAAAGAGTGTATAAATGCGGGGATGCTCACGGAATCGG
TGAGCGAATCAAACGCTAGGGCTTCCTCTGAAGGTGTGTACCATTTTCGA
CGAGTTCGACTGTCAGGCCGCTCATCATACATGGGAGGATCACGGTACTG
CATGAAGTTTTGTATGATACACACATCCCCACCCATATTCCCAAACAAAC
GCTTACCCGAACGGAAACTTCGCAGAGTCTGGTCTACCCCTCGCCGATGT
TGCGTGGACTCAGCCGCTCAGCACGGAAGAAGTGGCCAGGTCGGCCGTCA
AGTGCTGTCTGGAAGGAGCGGACTCTGTTGGCGGGGGCAGGGGCAAAGAC
TCGGGAGATGCGGTCGTGCTCAAGGTCCAGGACATGGCTAAAATTGCGGC
ATGATGACGGGTGTACGTACCTTTCTTCGAGCGATGTGTCGTCGAGGTTC
TATACATCGCGTCGTAGATGGCAGCGTGGTTGTATTGTTCCGCTTGATGT
TTGTACCTGATGGCGGGAGCGCGGTGTCCACGCGCGACGAGATGGTTGGT
CAGATTGTGACGACCGACGTGGTTGTGTGTTTTGCCGCAAGCTGCTGGCG
CGTCGTCGAGAGGTTCGATGTGTTGGCCTGCGCTTCACGCCGGAAGAAAA
TGTGCGCCACATGTTGGCTTGAAAGCAATATCTTGTGGAAGCAGGTTTTC
GAGAGTTGTGTCTGGAGGGCAGGCTTCGCGGTGTTGTCAAGATTTGATGC
CCAGGGCGGCAGTCAGCAAACCCTGACAGACGCCGTTTCTGTAGTTTTTG
TAGTCAAAATGGGTGTTGTTGTCGGAACGCTCAAGTGCCTGGAGTTAGAG
CCGCTTGAGAGCGCGTCTGTGTCGGGTGGACACGCCCGGGCTGCTGGCGC
AACTGTTGTGGTGTCTTCGTTGGTGAATCAGAGGGTTGGAAAACCTTTGC
TAAAACACTATTCGAGCTATGGTACGAGTATGGGCAAAACAATAGGAAGG
AGCGTTATTCACCCACCTGCCGCTGCTTCGCTTCCTGTATTCATGTCTGT
AGAGTACACAGAGCTTGACAGACGGGAGGAAACACCGACCTCACTATAAA
CACCAAAACACAGGAAGGCAGCACGCAGCGGTAAGACTAAGAGAGTGGCA
TTCCTTGCCGGACCGTACCCATGGGGCTGGAGTCCTCCACGTGCGTGCGT
GCAAAACTAACGACTTGGTGGCGTCTCGTTTGGCCATTGCGAGGGTGGAG
ACGGGTTTTGGGGGGGGCAAAAGGTAGGCGGGCTAGTGAAATACGGAGTA
AATACCAACTCTGCCAAACATGATGGGGGTGGTGGGGAGGCAGACGTGCG
GAGAGATTCGAAATGTAGAGCGACAACCTGTAAAAAGTACTTTGAAGTTT
ATATAGTTGAAGAGAAGTTCGAGTGAGGATGGGCCGCCGAGGATGGAAAC
TTGCATCGAATTCACAGACAGGCAACGGCTGTGGTCAATCAAGGGAGGGT
GGTCGAAAGACACATCAATCATGACAATTTGTTTTTTCATGATTCAATTT
TGAGGTTTGGGTTTGTTCAGAGTGTGTTGCGGTGTGGTCGTTGCGGCGTC
GTTTGTTTTTCACATACAAGTATGTTTGAGTGTGAGAGCGCTCGTCCTGT
CGCTCCGACTATCTACAAGTTATAATTTTGATTGGAGGTCACCATTGTTT
ATTTTGTTTGTTTTTTATTTCCTTCTAGCACGAGATATGTTTGGTTTGTG
AGCACGGGCTAGACTACGGCTGGGTGGTGAGCTAAATGTGAGAGTCAACA
ACACACCAGACAGCCGCAATTCATCGTCTTGACCTGCTGCTGCTATTTTG
ACCCCAAAATAACGCGGAACTATCACAAAAAAGCTTGCACTCGCGCAGTA
GATGGGTGATTGACTGGTCCCCTGCACGTTGAGGTGATTTCTCAGATTTG
AGGCACGTCCACAGCAGTCCTTGCAGCAGTAGCATATGCAGCAGGGAGGG
GTGTTCTCGTCTGTCTGAAAAAGGTGGGGAAAACGGCTACACCTTCCCAT
ATACCTTTTTTTTGTTCTGAGAAGGGAAGGACGAAGGGACAAGAGAGAAG
AGACGACTTAGGTTACGCCGTACAAGACGCTACCCCAACGCTGCACGCTG
CACGCTGCTCACAGCACAGCAGTAGACACCTCCAGTCGAGAGCAGTGCGC
CGCCATGTCGTCCAGGAACATCGTCCCAAAGCAGGGTAACGCGAAGGCGT
TACGGGCGAAGCGCAAACGGGAACCACAGGTCCACGAGAACGTGAAAAAG
GCTATCATCATTAAGGGCCGCAAAACCAGCCAGGATGTCACAGCCGCCCT
GAAAGACATCGTGAGTCGGTAGTTGGGTTCAACGCCAAAGCTGTATTGTA
CTGGTTCCAATTGGTGGACCGTTACCGCCACTAGTTGCCTGCCATCTATA
TGATGTAGGGTTTGTGCATGCTGTCTTAGAAGCTTGGGAGGTGTTATCAT
GCCTTCTTGGACTGCAACATATTTTTTTCATCACGTGTTGGTAAGGTCTT
GCGGGTGGCCTACAAGCGAGCCAAGAGACTCTGTTGTCTTTCATCATGTC
CCACGCACCCAGTAGTTTCATCGTGCAGCAGCACAAGCAGCAGACAGAAA
CACTCCATTGGCTGCTGTTTGACACGTGCCTTTAAAAATTAAACTTTGGG
CGTACGTTGTTCAGTCCTCCACGCCGACGCTTGATGGTCTGTACATATGG
TGTGATATCCGCTCCTGCGTGCTGCTTCAGCTTTTGCCTGAGAACGCTAA
GATACCACACCCCTAGGATCGATAGCAAAAGCCTCATGTACAGACTACCG
CAGAAAATAGGGTCGGTTCCGCGAAGGGAGACCGATCGGTGTTGTAATGA
TGGAACCATGCTGTCGGGAGCTTTCCGAAGACATAAACGTCATGGTTGGC
ACCGTCTCCGCTGTCGTTTTGTACTGACTGCACCCAAAATCGGTACAGCA
GGTGATCGAGTTTCGGAAATCTGTCGGTCCTGTTAATCTTAAGCGATCCT
GCGGTTGTTTCATGATTGACTTGCGACGTGCATCAAGACCCAGCTATGAT
ATACGAAGTACCAGCATAGCAGCAGCAGCAGCAGCAGCACCGGCAGTACT
TGGTCTCCAAACCCAGCAAGTCAGCAACTGCTGTCCGGGGTGTCAATCGC
AATCTCAATCTTGGTTCAAAAAGGATTTGTTTTTGAAACGTGGTTGATGT
TTCACATTACATGAGACAAAGATGGAAAAATTCAAGGAAACTTAAAAACT
CATCAATCCAATCGAATGTCATGAACCGGTCCTCGGATGCCGAAGAACAA
CATTGTCAACACGAGTGTACCAATAACACACAGAAACACACACACATCAA
CACGGTTGGCGCTACTAAGTCCCCTCGTGCCGCACCCACTCATGCGACAC
CGCCGGTAGGGCATTACGAGCATGTCCGACGACTGTCGTTTGCGTCGGTG
CCTTGAGTCACCAACACGTCGCTCGAGCGGTATGACTGCTACTGCTGCGG
TAGCGAGATTTTTCGTCCCCACAGAACAAGCCGTTGCATCGTACTGACAC
CTTGTACGAAGTAATCAAACATTTTTTACCTCTCCAGCCAAGCCTACTGA
CACCCAGGGCGTGAGTTTGAATCCCGGTGAAGTCATATCATATGATACGA
TCTCGTATTTTTCTCACAAAAGTTTTTGGGAGTGGAACACGACCACTCGA
ATGTCACGAGTGTACATACCAACACATTCGACTTGAAAAATCGACGAGGG
TAATGGACGGTTGAACCCCCCCGATCAAAAGCTGAAAGGCATAAAAATAA
GCACCACAGAAGGCTGACGGAAAAAAAGGAAGAACTCCTGTGAGGTCTTT
CTTCTGTTTACCCCGGCTAGTGCACCCACTTCATACCGAAAGGTGTAGAC
TGCTGCCCAGAATAAACGGGACGAAAACACGCACGCAGCGGTCATCCCAA
TGCTCCTGCTGCGATACATGACGAGGGGAACGCGCCAGCTTCGCGACCGC
GGGTGCATAAACGAGGCCCTGAGCAGCTAGCTTGAGAGTCATCGGATGCT
TGAGCGCGTAGATTAGGCAGTAAAAACACGAAACGAGTATGTCAGTGGCT
ATTTCTGATTGTTTTTCGTTATTTTTGGCTTTATTGCGTCTGTCGACCGC
TCTGCCCTTTTGCGAAACGGCTGACTTGCTTTACCGCTCTGCTTCTTTGC
CGAATTGACTTTGATCACAACACAAACGTTTTGTACTTTTCGGGGGCAAA
TAAGGCCAACTTCGGCGCGGATGTGCTCCTCGGCGGATGGTAGTATTGGA
TCGCTCTTTTCGGCGTCGTGTGCTGTGAGGCAGAAAGCTGTAAACTCGCT
TTTTGAAGCACACAACACCCCCGTTTTCAAGAAGAAAACACGGCAAAATA
ACACGTTCTTGGAACTTTTGACCGCCTGGCGTCGAATGCAAAACAAATTC
GGGGTTCGCCGGTTTATTCACAGGTATCACTCATGTGCGGGGGGGTGGTT
GACTTTTGAAGAGCCAAGTCGTGGTGGTCGCTGGAGTCATCTCTCGACCA
AAGTGTTCGTCTCGTGGTTCTCGTAAACCAAGTGATTTCGGCATCACGCA
CCATAGTTTTTTCTGTTTCCTGGCGGTTTTATTCAGTTTAGAAGCCAAGA
TTTGCCAACTAGTTGGCATCTGGTACACATTTTATCCGCGCATACATACG
AGGTATAAAGTATACCCGTGATGTTGCGGGCTGCTCTCGTGGCGATGACA
CACACGAAGTACATTTTTGTGTATCTGGAATCCGGTATGTCTGTAAAGGC
GAGTGATGCGCGCACTTGCACCCTTTTTACCGGCCGGGGCCGGTGATCAC
TGTATATTAAATGTACCTTCTCTCGTCTCACGCGCCTTTTTGGTCCCTTC
TCATCCGAAACTCTTAAATCAAATCATAAGTATTTACTGCTGTACCTTCT
CTCGTGCCACGCGCCCTTTTGGTTCCTTCTCATCCGAAACTCTCAAATCA
AATCGAATGTATTTACTCCTGTACCTTCTCTCGTCCCACGCGCCTTATCG
GCCCCTTCTCATCCGAACATCTCCAATCAGATGAAGAAATTTTACTGCTG
TACCTTCTCTCGTCTCACGCGCCTCGCCTCTTCTCATCCGAAACTCTCAA
ATCAAATCAAATCGAATCGAATCGAATCAATGAATTCAGTACCGCCTCAA
GTCTCCGGACGCCGTCATGTTCTCGAAGAAGAACGACACGAACCCCATGG
AGGACGAGACCTCGGCGGAGTTCCTCATGTCCAAGAACGACTGCGCGCTC
TTCTGCTTCGGCAGCCACAACAAAAAGCGACCGAACAACCTAGTGCTGGT
GAGACGAGACGAGACGAGATGGGATGGGATGGGATGGGATGAGATGAGAT
AAGGCAGGACTACAGCAGCGGGGCGGTATGATGGAAAAGCAATGTGTGTT
TGTATCGTCTCTTGTCTAATGTGAACGCCATTATACACCTGGTAGATACG
CAATGTGTGTGTTGTCTCCTTTCTAATCTGAACGCCAGTCAACAGCTTTC
GGTATACTTCGTTTTTATTTTATGGCGTGTGGTACAGGACGAGCCGGGAT
TTTACCGGCGAAGTACTCTAAACGTCAGTCTACAGCTTTCGGTATACTTC
GTATTTTACTTTATGGCGTGTGGTACGAGCCGGGAGTTTACTTGCGAAGT
ACTCAGGAGTAAGGTCTCACGTGATGTTTTTTTGCCCAAATGTTTATTAC
GGGAAGGTTTAGGCCGTCCACGTCCCTCGGCATGAGTTGTCTCGCGAAAA
TCGAATTCCACTCCCTTCTTGAAGGTACCATAAGGAATACCATCACAATC
CACCGGGATTCGAACTGATAACTTTTCTGTCAGGCTTTCGATGCCATACA
ATTTATCCCCCGGGGCGACTATACGCACTCAAAAATGAGTACTCTAACGA
TGAAAACTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCTTGTTCTTGTT
CTTGTTCTTGTTCTTGTTCTTGTTCTTGTTCTTGTTCTTGTTCTTGTCGT
CGTCGATTCTCAATGTTACATTACTCTATCGCCAAATTCTGTAGCACGTG
GTCACAAACAAGCCATGCACACAAACACGTGCCACAAGGATTTCGTGTCG
TGGATCAATCAGAGTTGGTCTCAACACACCAATACGTGGAGCAGCCTTGT
GCTCCTTTGACATGTCTGTGCTTTCATTTCAGTAGTACTGCTGTACCGCT
GTTGTGCGAGCAGTTCGGACTATGCTGGCTTGCCTCTCATGGGGTACTTG
ATGGGACATGAAATCATTTCTGATGCTGACAGATAAGAGCATTTTCATAT
AACAAACTTCAATATATTTTTATTTTTTGAGTTTGCACCATGAGAAAATA
TTTAGCAAGGTCAAACAACGAGTGAGAATTTTTTGCAACTTGTATTTGTT
TAGTTTGCACCATGTTGAAAAAGTTTCTCGGGATTAAACAACGAGCATTT
TTGTGGTGTGATAAAACATAAATAATGCGTTTTTTTTTCCGTAACAGGGG
CGAACATTCGACGGGCACATGCTGGACATGATCGAGATGGGGCTGGTAGG
GTACCGGGGGCTCGGAGAGCTATCGGGGCTGGCGAAGCGCGTGGGCTCCA
AGCCGGCGTTCTTATTCGCAGGGGAGAAGTGGGGAAGGGAGGAGACCTAC
CAAAAGCTGCAAAACCTGTTGCTTGGTGAGCAGGAGGGGCGAGCGAGAGA
GAGGCAGACACACAGATAGATATGGACAGAAACATGTACAGGGACAGAAA
CTTAGAGACCGACAAAGACGGAAACAGAGAGACAGGCACAGCCAGAGACA
GACAGGCAGAGATATGTTCTGCTCGATCTTGGTTGAGTTTTGCCGAAAAT
TTCATTCAACAGACAGACAAGACAGAGCTGTCTTATACGTTTTGGAGAAA
GTCGGCGGCTCTTGTATCTAGTATGTACGAGTATTTCTACCTTTTATTGC
ATGTATGGTATCACATGTGTATTCAGCGCTTTCTTCACGGTTCACTTTTT
GTTCACACCGGCGTTGTCTTGTTTTATCTTTCTACATGAAGGGGGTGTGC
TATCTTATGAGAGTGTGACATGCTATGCAACCTACTACTGTGGTTGATTC
CCCGCGCTACTCAACATGAACTGGTTGCACCATAAACGGCCATCTCAACC
ATTGCATTGATTTTACGCAAATAGAAAAGACAAGAGGGCATGAGGCAACT
CTGACGCCGACGCCGCCGGCACGTATATACATACACGCGGCCTCGTTGGT
TTTTTTCGGTTGGGCGCTGCCTGCCCTGTGTCGGCTGTCGGTGAACGTGC
CTACGGCTCGATTTTTCCTCTTTCGCGGACATGCTACAGTATGAAACCTC
CGAAATACCCTTTGCTGCCTCCTTTTTGCGTGTGAAAGGTGTGTGGGTGC
GTGCGTTGTTGTTGCCGTTGTCGTTGTTGATTCTCACGTTAGCTCACCAC
CAAAGAGCCTTGTCCGCGGTCACAGGCAGTGTTTGTTTACGCATGCATGC
CGTGTGCTGTCCTAGAATATACTACCGCTGTTGGATTTTCATCGAGCCTT
TGTGCCGACTTAAAAAAAAAAAAAAACGAAAAAGTCGAAGACGCTACCCC
CGTGCTGCGCCTCGCTTGTGTGTTTTACCCACGCGTGCTGTCCTAGAATA
TACTACCGCTGTTGGATTTTCATCGATCTTTTTGGCCTACTTGAAAAACA
CCCCGAAAAAGTCGAAGAGGCTAATCCCGTGCTGTGCCTCGCTTGTGTGT
CTTTACCCATGCGTGCTGTCCTAGAATATACCACCGCTGTTAGGGATTTT
CATCGAGCCTTTTTGCCTACTTGAAAAGCCCCCCCGAAAAAGTCGAAGAG
GCTAACCCCGTGCTGTGCCTCGCTTGTGTGTTTACCCATGCGTGCTGTCC
TAGAATATACTACCGCCGTTGGATTTTCATCGAGCCTTTTGGCCTACTTG
AAAAAAACCGAAAAAGTCGAAGAGGCTACCCCCGTGCTGTGCCTCGCTTC
TTGTGACGTGTTGCCTCTCTCTCTCTCTCTCTCTCTCTCTCGTCTCCATC
TCTCTTTTCGTGTGCGTGTGTATGTGCTGACGTCTGAAAATGTTTTGTTG
TTTTTGTCACAAGACTTCTTCAGGGGGCAGATTGTCAACGAGGTGGCCTT
GGCAGGGTTGGACCACTGCGTGGTGTGCACCGCGGCGTCGGACAAGGTGC
ACGTGCGGCACTACCACATCGGATTCCAGCGGTCTGGATCCAAGGTGAGA
TACAAACAAGGGCGGAGGAATGTGTGTGTACCAGGGCATGTGTTGTCTTA
TCAGGAAAAACTGTTCCGATCTCTGCTCAGTACCTTCTTATGTCCGGACC
GCCGACGCATCCGAAAGGGGACGCTTTTCCGTGGTCACAGGCCATCACAC
CTACCCAAAAAAGGGGGATGGAGTACCGGTACATCCCAATGTCCGTACTG
CAGACTCATCCGAAAGGGGACGCGTTCCGCATTCACAGGCTATCACACTT
GCCCAAAAGCGGGGTATAGAGTACCGGTACCTTCTAATGTCCGCACGGCC
GACTCATCCGAAAGGGGACGCTTTCCGTGGCCACAAGCTATCATACCTAC
CCTTAAAAAGGGTACACAACTATGTCACGAAATTCTAGCGTCGTGTGTGT
GTGTTGTCATCCCTTTAATTGGACGCCTGCACCTTTCGGGTAGGTCGACG
CTCCAACTGGGGTCACACGGGGGGAAGTCAACACAGGAGTTTGTATTTTT
TACGTACTCGGGAAAAATCCTTGCTGTGCAGTAGAGGTACACCCAGGGCA
AATCCGACAAACGGAAGCTTTGTTTTCTATTGGGGGTAATAGTAGTAGGG
GGGAGGAAGAGGGGAGAGAACATTTGGAGGATGCAACCGCTGGCGTAAAA
TTTCTAGTGGTGTGGTTTTGTTACGGCGATGCCATCGTTTATAATTTTGG
CTTTTTCGTCGTTGTTTATTTTATCAATGCCTGTCCTAGTCTTGACAAAG
CTGGAATCCTCCCCCTATCGAAAGCGAGCCATCATTTCACAGAGCATGTC
ACAGGCACATGGGTCTCTGTTGTTTTCATTGTAAAGCAGATCCTCTCTCA
CGTGCGGTAGCAGTGCACCCCATTTTTTTTTTTTCGACCTACTGATGTAC
CCCTTTTTTCGACCCTTCTGCGTCACCTTATATTGTCTTGGGCGCTGTGT
TTTTGCAGGTCCCAAACGTGGGGTTGAAGGAGATGGGGCCGTCGCTGGAC
CTACAGATCCGACGCACTAGCTTTGCCGCCACGGACTTGTGCAAGGCGTC
AAACAAGAAACCGAGAGTGTGAGTCACGAGGCAGGCTCCTTAAATAAAAC
CCCAATCGTGGAAGCTATCATAGTTGTGTAAACACATTTTCGACACTTCT
GTCTTTGCCGACTGTGTGCGCCAACGGTTCTGGAGGTGGTGTGCGAGGCA
TTTTTTTTGTTGTTCTGTGTAAGAGCCAACGCCCTTCGGCGCTGCGAGTG
CACCGTACTTGCTTCCCTGGCAACACTGTTGTAACTGTCGCAAAACGCAC
AGGTTGATGTACCCAACGAGTGTCCGTTCGTGTAGATAATCAGAGTATTA
TTTGGCATACACTGCCGGAGGAAGGTGCCGGGGGGGACACCGCCGACGGA
ATTTTCTAGGGGGTGGGGGGGACACCACTGACGGAATTTCTACGTGGTGT
AGACTAACATACCTGAGTGTGAACAGAGATATGATTTTTTTATGTGACCA
GGTTTTCGTTCTTTTCGAGAGAAAAGTCTGCACGCCCTCTGTACACTTGT
ATGTTGTACGCACGTATCATACTTCTTACGAGAAGACAGGGAGATACGAA
ACACCGTCTCCGCAAAAAATTCCAGTCTAGGTTCGTAGATCTCCGAAAGT
TCCAGTCGAGGTTCGTAGATCTCCGAAAGTCCCAGTCGAGGTTCGTAGAT
CCCCTGATACATGGCCCGCCGACGGATATCGGGCTAATTATTCATTTTTC
CTTCTCGGTGGGTGCATATTTTTTGTTTCCAAAAATGTATTTCGGGGTAC
GTTTTTACAGCCGTCATCCACAGCAGCTGCGTTTGTTTCCTCCGTTGATT
CTTTGTGGCACATCCGTGGCAGGGCCGAGAAACGGAAGGTGAAGAATATC
TCGGAGAACCAGTTCGGTGACAAGCTCGGCCGCATCCACCTTGGCAGACA
GGACCTGTCCAGCATGAAGGTATGAAACTGCTGTCATTACGACAGCGCGA
CGTTTGCCGGAAGGATAATGAATGCCTGAGCGTGCGTCCGTTCGTGTGGT
GTGGCGGCACCTGTCGGCGACGTTGGCTATGTATGCTACTGCTGCCCTGC
ATTGTCTTGTCTTGTCTTGTCTTGCCTTATTGTGTCTTGTCGTGTCTCTT
CATTTTCTCGAAAAGCCACCAGCGCCATCGATGAAGCGGTAGTTAGGCTT
GTACGGTCTGCCAGCTGATCGGCATTATTTATTTGCAAGATTCCCACGAA
TCAAGGGGCCTGGATCACTTGACGCAGTTGTTGAGCTCAGACGTGGCTTC
GAATTCAACTATCCAATACGGATATCGCAAATCGGGATTATTTGTACGAT
GCTTCGTGTGATATGATATGAAATGAAATGAAATGAAATGTGCGGAAAAA
TCCGCGAAAATTCTAGTCAAGGGTATTTTTTTTTCTTTTCTGGCATCTTC
GTGTTGTGTGAGTGTCTGTGCGTGTTTGTCTCTTGGTGTGTTTGTGTTTG
TGTGCTTTTGTTTGTCCGCAAATTCCGAGCAAAATTCCGAGTTCGTCCGT
TGACAGTCCTTGACTCTCCACTCTCCACCCTTTGTCACTTTTCCTTTCAA
ACAGATAAACGCTGCAACTGAAAGGGTCGTCCTTTCCTCGTGCTCGGAAT
CCTGTTTTTGTTTCTGCGTATCATACCGCATCTGGTCTCCTGATTTTGTA
TGTGTGATTTTTGTGAATTTTCGTGTTGTGCTCGTTTTGTGCTTTTGTGG
GTGTGTTTGTATGACTGCTGTGTGTGTTAATTACTACAGTTACCTTTCGT
CTTGGTTCTGCCTAAGCGTGTTTTGGCTTTCTACGTTTTTATCATCAGCA
CATGCCTCGCGCATGTACACACATCAATGAGCGTTTCTTTTATCCGCTGC
CCTTTTTTTTTTTTATGGGGCCTCTTGATAGTTCGGACAAGCGTGGAGTT
GGGCTGCCCATAAAGAGAGGTTGTCGTCCCACGCGGCGGAATTTTCAAGA
AAAGAGAGATTGGCGCTTCATGCGGGGGAACATTCAAGGAGAATAGAGTT
TGGCGTTCCATGCGGCGCAATATTCAAGAGAGAGGTTGGCGTTCCACGCG
GCGGAACATTAAAAAACGAGAGGTTGGCGTTTCATGCGGTGGAACATTCA
AGGAGAATAGAGTTTGGCGTTTCATGCGGCGGAATATTCAAGAAAGAGAG
AGGTTGGCGCTCCACGCGGCGGAACATTAAACAAAAAGCTGTTAGCGTTT
CATGCGGCGGAATACCCAAGAAAGAGAGAAGAGAGAGGTTGGCGTTCCGC
GCGGCGGAAAATATTAATATTTTATCTCGGCAACAAAACACGGTCATTTT
TCGACGAAAACAGATCAAAATATTCTGAAAATACGTACTTGTATCATATG
ATAATTGAAATAATTCAATTAAAAAATTGCAGGTTCGCCGTGTGAAGGCT
CTACGGACCGTGGGCAAGAAGGCGGTCGCAGAAGGCGACGGTGGTGCAGA
CGGTGGCGGAGACGCCATGGAGGGAATCACCACGACAGGCGAGGGTGGCG
GCGGCGGCGGGGGGCGGGGGGAGGGTTCGAGCGGGGAGGGCGGTGCGACG
GCGGCATCCAGGGCGAAGCGTGGAACACGCCGCAAAAACCAGGAGAGGAA
GCTTCTTTGA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig111:483500..501709- >mRNA_P-littoralis_Contig111.98.1 ID=mRNA_P-littoralis_Contig111.98.1|Name=mRNA_P-littoralis_Contig111.98.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1059bp|location=Sequence derived from alignment at P-littoralis_Contig111:483500..501709- (Pylaiella littoralis U1_48) ATGTCGTCCAGGAACATCGTCCCAAAGCAGGGTAACGCGAAGGCGTTACG GGCGAAGCGCAAACGGGAACCACAGGTCCACGAGAACGTGAAAAAGGCTA TCATCATTAAGGGCCGCAAAACCAGCCAGGATGTCACAGCCGCCCTGAAA GACATCTACCGCCTCAAGTCTCCGGACGCCGTCATGTTCTCGAAGAAGAA CGACACGAACCCCATGGAGGACGAGACCTCGGCGGAGTTCCTCATGTCCA AGAACGACTGCGCGCTCTTCTGCTTCGGCAGCCACAACAAAAAGCGACCG AACAACCTAGTGCTGGGGCGAACATTCGACGGGCACATGCTGGACATGAT CGAGATGGGGCTGGTAGGGTACCGGGGGCTCGGAGAGCTATCGGGGCTGG CGAAGCGCGTGGGCTCCAAGCCGGCGTTCTTATTCGCAGGGGAGAAGTGG GGAAGGGAGGAGACCTACCAAAAGCTGCAAAACCTGTTGCTTGACTTCTT CAGGGGGCAGATTGTCAACGAGGTGGCCTTGGCAGGGTTGGACCACTGCG TGGTGTGCACCGCGGCGTCGGACAAGGTGCACGTGCGGCACTACCACATC GGATTCCAGCGGTCTGGATCCAAGGTCCCAAACGTGGGGTTGAAGGAGAT GGGGCCGTCGCTGGACCTACAGATCCGACGCACTAGCTTTGCCGCCACGG ACTTGTGCAAGGCGTCAAACAAGAAACCGAGAGTGGCCGAGAAACGGAAG GTGAAGAATATCTCGGAGAACCAGTTCGGTGACAAGCTCGGCCGCATCCA CCTTGGCAGACAGGACCTGTCCAGCATGAAGGTTCGCCGTGTGAAGGCTC TACGGACCGTGGGCAAGAAGGCGGTCGCAGAAGGCGACGGTGGTGCAGAC GGTGGCGGAGACGCCATGGAGGGAATCACCACGACAGGCGAGGGTGGCGG CGGCGGCGGGGGGCGGGGGGAGGGTTCGAGCGGGGAGGGCGGTGCGACGG CGGCATCCAGGGCGAAGCGTGGAACACGCCGCAAAAACCAGGAGAGGAAG CTTCTTTGA back to top
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