mRNA_P-littoralis_Contig111.80.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig111.80.1
Unique NamemRNA_P-littoralis_Contig111.80.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 645 bits (1663), Expect = 6.010e-202
Identity = 465/1127 (41.26%), Postives = 582/1127 (51.64%), Query Frame = 3
Query:  366 LQKQELVNVLSAFIKDSLFPIYPKRVPACIDGKLELPLINEFSTPFASKQRRFHCKRER*SKLKLRNW------------WPVV*FVDPCPRGPPSACASETGL-----SDSA*TGVCSTNMW*LTAGVWAICKRFLTV*RANGIFHNSIWPLVFIKYKSP-RKTD------TRRSFGMPT--ACFTSSQEQGLDSLSCRPHLLEP*KQRWDR*KTSVVGWM------TFSPQATHESSTLQLLSSYCEG*KQQVYLLIWRNACLVLHPWNFFGMIIDSSGIHPAPSKLEAIAAMPRSQTVEELRTFLGMTGYLRQFVEQYGVICAPLTDILRNKAFASKRARKCPIPRGKAADEAFNSIRSALASPTF--FKKFEPK*KTNCSCISGP*SPFRNSYGCQCCGCWSSTHTKY*GSPTCYSFRKSPFFQD--RCAP---------------RTY*TRMHGCLVGSATL*AVCVR*AV*TGH*LLCANL---AIS*P*SVSQAA*VGSTPHGTRHGTGVACGHQPRPPRCIVASTAQP*TGERRG*FFSR*RYVSPARPICRAPRA*FRWSPFSGSRSNSR*LPSAKVAAMATVEQPVDVTPVENSSVAGPDEQS----LLLYPSLPFAACDALPAQE--PRRSTRRRTPSVRLQPFP----PPVPLVYPPPHQET-----------ELTPVDTVVAEQSPGHFSFRDKGEVSEVRSAGGEVPSPRAVDQPRPSVPVDRAASILTDPNLPVAQQGSDPFRAQVWKRLEQ-PELQCVG*ARHRF-VGVND---------RNLIAIPQSMVANILALVHVLHGHAGVGPTLALAREKFHWPTQVKDTREYVKAYSCRKRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 3488
            L+K +LVNVL+AFI+D LFPI PKRVPAC++G+LELPLINEF TPFA+KQRRF  +  R  + +++              W           G    C     L     SDS   G   T    L        K F  +  A+G     I      +YK+  R  D      TR  FG+    A FT   +  L  L+                   V  W+      + S +    + TL L      G        I+  A        F GMIIDS+G++PAPSKL+AIA MPR  TVEELRTFLG+TGYLRQFV  Y +  APLT+ILRNKAFASKRARK PIP   A ++AF S+R  LASP    F   E               PF         G  +S      G     +F    F Q   R  P               R Y       LV   +      R         LC  L   A+     + +         G  H    A    P      VA+  +    +             P    C A  A     P          L   ++A +  V+  VD     +S  + P  +     L    +LPFAAC A+  +   PRRS R RTPSVRL+P      PP  ++   P +E              +P     +  +PGH       ++ EV +A GEV +  +      +  +D  A +LT P+    +Q  D   +QV K L    +    G  R R+ +G +D         R L AIP +MVA+I+ALVH LHGHAGVG TL+L R+ FHWPT   DTR YV + +CR+RKR  SR+VAMMP R +EPWD L +DIL IDT S++ N YVLLVVD+A+ FPFGFPL +KQ++GVAR +VELCLT+GVP+ +RCDGG EF AEVV HLCRWL+A I FG ADHPR QG+VERLGGWLQELLAELC+ WP RW EYVSPA+WIKRTLPD SLP  +TPFELLFGR PRTSLDSLVP  +  D+ RGLDNFVERRKQNLREVRL LEKR +LR ++R + N +I+RSS GV V K   VLVRE  + R RD RG+KL+H++Y+GP
Sbjct:  636 LKKHQLVNVLAAFIEDGLFPIDPKRVPACMNGELELPLINEFCTPFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGK-----KYFTQLDLASGFHQMEIAEKD--RYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA------------------GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQ-----EFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLE--------------RPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRE------LCPKLHRWALR----LMEYDMELEWKAGVEHVVPDALSRLP------VANPVEVDVDDS-----------FPDDLSCAAGAAVEILGPE---------LKGVRLAELDPVQ--VDQVGDADSQPSHPTPEGADFHLSALRALPFAACAAVDHEPDAPRRSGRTRTPSVRLRPIGDAQLPPTSVLEALPDREAIGPSAVQASTPAPSPSTLPPSPVNPGH------DDIGEVLAARGEVTTSSSSHALDGASAIDLTARVLTRPSELAHRQRVDTHLSQVRKVLSNVADSSQGGSERDRYSLGTDDVIRYNDGKGRKLPAIPVAMVADIIALVHTLHGHAGVGATLSLLRDHFHWPTMTNDTRHYVLSCACRRRKRPPSRRVAMMPGRPLEPWDELQMDILKIDTPSQTGNNYVLLVVDRASKFPFGFPLKTKQAVGVARVVVELCLTYGVPKTVRCDGGPEFGAEVVKHLCRWLRASIVFGAADHPRGQGAVERLGGWLQELLAELCRFWPDRWDEYVSPAMWIKRTLPDTSLPSNMTPFELLFGRKPRTSLDSLVPLTDEMDQERGLDNFVERRKQNLREVRLALEKRQELRVAARAKANASIDRSSAGVGVMKESLVLVREFESCRHRDHRGRKLQHDLYTGP 1674          
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5J7F8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7F8_9PHAE)

HSP 1 Score: 456 bits (1173), Expect = 1.540e-135
Identity = 372/1069 (34.80%), Postives = 474/1069 (44.34%), Query Frame = 3
Query:  363 GLQKQELVNVLSAFIKDSLFPIYPKRVPACIDGKLELPLINEFSTPFASKQRRFHCKRER*SKLKLRNWWPVV*FVDPCPRGPPSACASETGLSDSA*TGVCSTNMW*LTAGVWAICKRFLTV*RANGIFHNSIWPLVFIKYKSPRKTDTRRSFGMPTACFTSSQEQG------LDSLSCRPHLLEP*KQRWDR*KTSVVGWMTFSPQATHESSTLQLLSSYCEG*KQQVYLLIWRNACLVLHPWNFFGMIIDSSGIHPAPSKLEAIAAMPRSQTVEELRTFLGMTGYLRQFVEQYGVICAPLTDILRNKAFASKRARKCPIPRGKAADEAFNSIRSALASPTFFK------KFEPK*KTNCSCISGP*SPFRNSYGCQCCGCWSSTHTKY*GSPTCYSFRKSPFFQDRCAPRTY*TRMHGCLVGSATL*AVCVR*AV*TGH*LLCANLAIS*P*SVSQAA*VGSTPHGTRHGTGVACGHQPRPPRCIVASTAQP*TGERRG*FFSR*RYVSPARPICRAPRA*FRWSPFSGSRSNSR*LPSAKVAAMATVEQPVDVTPVENSSVAGPDEQSLLLYPSLPFAACDALPAQ--EPRRSTRRRTPSVRLQPFPPPVPLVYPPPHQETEL---------TPVDTVVAEQSPGHFSF----RDKGEVSEVRSAGGEVPSPRAVDQPRPSVPVDRAASILTDPNLPVAQQGSDPFRAQVWKRLEQPELQCVG*ARHRFVGVNDRNLIAIPQSMVANILALVHVLHGHAGVGPTLALAREKFHWPTQVKDTREYVKAYSCRKRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 3488
            G  KQ+LV VL+AFI+  LFPI PKRVPAC++G+L+ PLINEF TPFA+KQRR   +  R  +   +        VD                      GV   +M       WA   + L V +  G         + I ++   K     S G+          +G      LD  S    +    K R+          +T  P A                  ++VY   +             GMIIDS+G++PAPSKL AI  MPR  TVEELRTFLG+TGYLRQFV  + +  APLT+ILR+KAFASKRARK PIP   A ++AF  +R  LASPT  +       FE           GP    R   G      WS  +               P+   R             L  S  L     R A+                  + +   V     G  H    A    P      VA TA+                                        S  R   +    A  ++  P            G  + +L    +LPFA    L A+  E RRS R RTPSV L+P    +  V  PP  ET L         TPV+ V               R   ++ EV +A G+VP        R +  +DRAA +LT P++ +AQ+                                                                                           RKR  S++VAMMP R +EPW+ L +DIL ID  S + N Y+LLVVD+A+ FPFGFPL +KQ++G AR LVELC TFGVPR I CDGG  F AEVV H CRWL+ADI F  ADHPR QG+VERL  WLQELLAELC++WP RW +Y+ P++WIK TLPD  LP  +TPFELLFGR P T+LDSLVP  +      GLDNFVERRKQNLREVR+VLE+  +LR ++R + N T E+SS GVAV +   VL+RE  + R RD R +KL+H++Y+GP
Sbjct:  531 GFLKQQLVEVLAAFIEGGLFPIDPKRVPACMNGELQRPLINEFCTPFAAKQRRLSPEERRMIRADAQQ------VVD---------------------RGVIGRSM-----SPWA--AQCLCVKKKGGTLR------LCIDWRELNKLLVSDSGGLGDMHALFDGLKGNKYFTQLDLASGFHQMEIAEKDRFG---------LTVPPAAF----------------TRRVY---FAKCIFGAASQESLGMIIDSTGLYPAPSKLVAIGRMPRPHTVEELRTFLGLTGYLRQFVPNHSLTAAPLTNILRSKAFASKRARKLPIPWTTAEEDAFQPLRGTLASPTTIEGVTRAVAFESHRFLLTDARRGP---TRECMGVL----WSVDYFH-------------PYLAGRQFKLVTDCSALRWLFRSRELCPKLHRWAL-----------------RLMEYDMVLEWKAGVEHVVPDALSQFP------VAGTAEV---------------------------------------SKGRTAQTEDAVAYVSLPPPAQ----------GAVDSNLSALRALPFAMGAVLDAKPRELRRSGRTRTPSVPLKP----IGGVQLPPVGETGLLQDEQVAGPTPVEAVPPAXXXXXXXXSPVQRSHDDIGEVLAARGDVPRSSLGPDVRGTSAIDRAARVLTKPSI-LAQR-------------------------------------------------------------------------------------------RKRPQSKRVAMMPGRPLEPWNELQMDILKIDKPSLTGNNYILLVVDRASKFPFGFPLETKQAVGAARVLVELCPTFGVPRTIHCDGGSGFGAEVVKHPCRWLRADIVFSGADHPRGQGAVERLREWLQELLAELCRSWPDRWDDYLYPSIWIKLTLPDTVLPSHMTPFELLFGRKPGTTLDSLVPLTDETGAEGGLDNFVERRKQNLREVRMVLERWHELRVAARAKANATFEKSSAGVAVGRNSLVLIRETESRRHRDRRERKLQHDLYTGP 1343          
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5KFK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK7_9PHAE)

HSP 1 Score: 429 bits (1104), Expect = 4.360e-129
Identity = 358/982 (36.46%), Postives = 458/982 (46.64%), Query Frame = 3
Query:  366 LQKQELVNVLSAFIKDSLFPIYPKRVPACIDGKLELPLINEFSTPFASKQRRFHCKRER*SKLKLRNW------------WPVV*FVDPCPRGPPSACASETGL-----SDSA*TGVCSTNMW*LTAGVWAICKRFLTV*RANGIFHNSIWPLVFIKYKSP-RKTD------TRRSFGMPT--ACFTSSQEQGLDSLSCRPHLLEP*KQRWDR*KTSVVGWM------TFSPQATHESSTLQLLSSYCEG*KQQVYLLIWRNACLVLHPWNFFGMIIDSSGIHPAPSKLEAIAAMPRSQTVEELRTFLGMTGYLRQFVEQYGVICAPLTDILRNKAFASKRARKCPIPRGKAADEAFNSIRSALASPTF--FKKFEPK*KTNCSCISGP*SPFRNSYGCQCCGCWSSTHTKY*GSPTCYSFRKSPFFQD--RCAP---------------RTY*TRMHGCLVGSATL*AVCVR*AV*TGH*LLCANL---AIS*P*SVSQAA*VGSTPHGTRHGTGVACGHQPRPPRCIVASTAQP*TGERRG*FFSR*RYVSPARPICRAPRA*FRWSPFSGSRSNSR*LPSAKVAAMATVEQPVDVTPVENSSVAGPDEQS----LLLYPSLPFAACDALPAQE--PRRSTRRRTPSVRLQPFP----PPVPLVYPPPHQET-----------ELTPVDTVVAEQSPGHFSFRDKGEVSEVRSAGGEVPSPRAVDQPRPSVPVDRAASILTDPNLPVAQQGSDPFRAQVWKRLEQ-PELQCVG*ARHRF-VGVND---------RNLIAIPQSMVANILALVHVLHGHAGVGPTLALAREKFHWPTQVKDTREYVKAYSCRKRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQ 3053
            L+K +LVNVL+AFI+D LFPI PKRVPAC++G+LELPLINEF TPFA+KQRRF  +  R  + +++              W           G    C     L     SDS   G   T    L        K F  +  A+G     I      +YK+  R  D      TR  FG+    A FT   +  L  L+                   V  W+      + S +    + TL L      G        I+  A        F GMIIDS+G++PAPSKL+AIA MPR  TVEELRTFLG+TGYLRQFV  Y +  APLT+ILRNKAFASKRARK PIP   A ++AF S+R  LASP    F   E               PF         G  +S      G     +F    F Q   R  P               R Y       LV   +      R         LC  L   A+     + +         G  H    A    P      VA+  +    +             P    C A  A     P          L   ++A +  V+  VD     +S  + P  +     L    +LPFAAC A+  +   PRRS R RTPSVRL+P      PP  ++   P +E              +P     +  SPGH       ++ EV +A GEV +  +      +  +D  A +LT P+    +Q  D   +QV K L    +    G  R R+ +G +D         R L AIP +MVA+I+ALVH LHGHAGVG TL+L R+ FHWPT   DTR YV + +CR+RKR  SR+VAMMP R +EPWD L +DIL IDT S++ N YV LVVD+A+ FPFGFPL +KQ++GVAR +VELCLT+GVP+ +RCDGG EF AEVV HLCRWL+A I FG ADHPR QG+       +Q
Sbjct:  114 LKKHQLVNVLAAFIEDGLFPIDPKRVPACMNGELELPLINEFCTPFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGK-----KYFTQLDLASGFHQMEIAEKD--RYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA------------------GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQ-----EFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLE--------------RPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRE------LCPKLHRWALR----LMEYDMELEWKAGVEHVVPDALSRLP------VANPVEVDVDDS-----------FPDDLSCAAGAAVEILGPE---------LKGVRLAELDPVQ--VDQVGDADSQPSHPTPEGADFHLSALRALPFAACAAVDHEPDAPRRSDRTRTPSVRLRPIGDAQLPPTSVLEALPDREVIGPSAVQASTPAPSPSTLPPSPVSPGH------DDIGEVLAARGEVTTSSSSHALDGASAIDLTARVLTRPSELAHRQRVDTHLSQVRKVLSNVADSSQGGSERDRYSLGTDDVIRYNDGKGRKLPAIPVAMVADIIALVHTLHGHAGVGATLSLLRDHFHWPTMTNDTRHYVLSCACRRRKRPPSRRVAMMPGRPLEPWDELQMDILKIDTPSQTGNNYVFLVVDRASKFPFGFPLKTKQAVGVARVVVELCLTYGVPKTVRCDGGPEFGAEVVKHLCRWLRASIVFGAADHPRGQGAATEARSLVQ 1007          
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5JV25_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV25_9PHAE)

HSP 1 Score: 402 bits (1033), Expect = 1.610e-127
Identity = 195/286 (68.18%), Postives = 231/286 (80.77%), Query Frame = 3
Query: 2631 DTREYVKAYSCRKRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 3488
            DTR  V + +CR RKR  SR+VAMM  R +EPWD L +DIL IDT S++ N YVLLVVD+A+ FPFGFPL +KQ++GVAR  VELCLT+GVP+ +RCDGG EF AEVV HLCRWL+A+I FG  DHPR QG+VERLGGWLQELLAELC++WP RW EYVSPA+WIKRTLPD SLP  +TPFELLFGR PRTSLDSLVP  +  D+ RGLDNFVERRKQNLREVRL LEKR +LR ++R + N +IERSS GV V K   VLVRE  ++R RD RG+KL+H++Y+GP
Sbjct:    4 DTRHCVLSCACRTRKRPPSRRVAMMSGRPLEPWDELQMDILKIDTPSQTGNNYVLLVVDRASKFPFGFPLKTKQAVGVARVAVELCLTYGVPKTVRCDGGPEFGAEVVKHLCRWLRANIVFGATDHPRGQGAVERLGGWLQELLAELCRSWPDRWDEYVSPAMWIKRTLPDTSLPSNMTPFELLFGRKPRTSLDSLVPLTDEMDQERGLDNFVERRKQNLREVRLALEKRQELRVAARAKANASIERSSAGVGVMKDSLVLVRESESSRHRDHRGRKLQHDLYTGP 289          
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5KZY5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZY5_9PHAE)

HSP 1 Score: 352 bits (903), Expect = 1.940e-97
Identity = 337/1080 (31.20%), Postives = 447/1080 (41.39%), Query Frame = 3
Query:  309 QGALGSAGQPDPQWRSAAGLQKQELVNVLSAFIKDSLFPIYPKRVPACIDGKLELPLINEFSTPFASKQRRFHCKRER*SKLKLRNWWPVV*FVDPCPRGPPSA-CASETGLSDSA*TGVCSTNMW*LTAGVWAICKRFLTV*RAN-GIFHNSIWPLVFIKYKSPRKTDTRRSFGMPTACFTSSQEQGLDSLSCRPHLLEP*KQRWDR*KTSVVGWMT--FSPQATHESS----TLQLLSSYCEG*KQQVYLLIWRNACLVLHPWNFFGMIIDSSGIHPAPSKLEAIAAMPRSQTVEELRTFLGMTGYLRQFVEQYGVICAPLTDILRNKAFASKRARKCPIPRGKAADEAFNSIRSALASPTFFKKFEPK*KTNCSCISGP*SPFRNSYGCQCCGCWSSTHTKY*GSPTCYSFRKSPFFQDRCAPRTY*TRMHGCLVGSATL*AV--CVR*AV*TGH*LLCANLAIS*P*SVSQAA*VGSTPHGTRHGTGVACGHQPRPPRCIVASTAQP*TGERRG*FFSR*RYVSPARPICRAPRA*FRWSPFSGSRSNSR*LPSAKVAAMATVEQPVDVTPVENSSVAGPDEQSLLLYPSLPFAACDALPAQEPRRSTRRRTPSVRLQPF-----PPPVPLVYPPPHQETELTPVDTVVAEQSPGHFSFRD----KGEVSEVRSAGGEVPSPRAVDQPRPSVPVDRAASILTDPNLPVAQQGSDPFRAQVWKRLEQPELQCVG*ARHRFVGVNDRNLIAIPQSMVANILALVHVLHGHAGVGPTLALAREKFHWPTQVKDTREYVKAYSCRKRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLD-SLVPCPERADERRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 3488
            QGA+    + D    +   L++Q+L NVL+AFI+D LFPI PKRVPACI+G+LEL LINEF TPFA+KQR F  +  R   ++  N       V      P +A C       D+    +C           W    + L       G        L   K+K PRKT TRR F M   CF +     L  +S   HL            + V  W+        T E      TL L      G        I+  A        F GMII+S+ ++PAPSKL+ IA MPR  TV+ELRTFLG++GYL + V                                     AF S+R  LASP                                                     K   + D   P    T      VG++ +  +    R      H               SQ           R G        P    C+ A  A                 V   RP             +     N   +P A   +   V  PV+V  V++S    PD+   LL P+   +     P  + RR+   R PSVRL+P      PP   L   P  +    T V++     +P             ++ EV +A GE P+  +      +  +D  A +LT P+    +Q  D    QV K L        G                                    G G                           C +RKR  SR+VAM+  R +EPWD L +DIL IDT S++ N Y+LLVVD+A+ FP GFPL +KQ++GVAR +VELCLT+GVP+ +RCDGG EF AEVV HLCRWL+A+I FG ADHPR QGSVERLGGWLQE+LA+LC++W  RW  +VSPA+WIKRTLPD SLP  +TPFE L G    +    S +     +  R G++                     +LR ++R + N +IERSS GV   K   VLV E  ++R RD RG++L+H++Y+GP
Sbjct:  846 QGAVVGVARADANLGTLGSLKQQQLGNVLAAFIEDGLFPIDPKRVPACINGELELLLINEFCTPFAAKQRLFSPEERR--IIRAENQQLEDRGVIRQSMSPWAAQCLCVKKKDDTL--RLCID---------WRELNKLLVSDSGGFGDMQTIFDGLKGKKWKPPRKTVTRRPFEMRMECFGNL----LARVSALEHL------------SGVFSWLDDILIASDTWEEHLVTLTLVLNRLLAAGRSVNFAKCIFGAASQ-----EFLGMIIESTDLYPAPSKLDTIARMPRPLTVKELRTFLGLSGYLPEEV-------------------------------------AFQSLRETLASP-----------------------------------------------------KVLAYPDLERPFELHTDASTLRVGASLMQTIDGVTRAVAFASH-------------RFSQT--------DARRG--------PTERECMGALWA-----------------VDHFRPWALRLMEYDMELEWKAGVENV--VPDA--LSRLPVANPVEVD-VDDSI---PDD---LLSPAAGASVEILGPELDGRRT---RIPSVRLRPIDDAQLPPTSVLEAIPDREAIGPTTVESSAPAPAPSTLPPSPVRPGHDDIGEVLAARGEFPTSSSSQAIGGASAIDLTARVLTRPSELAHRQRDDTHLGQVRKVLSNGADSSRG------------------------------------GSG---------------------------CDRRKRPLSRRVAMVAGRPLEPWDELQMDILKIDTPSQTGNNYILLVVDRASKFPIGFPLETKQAVGVARVVVELCLTYGVPKTVRCDGGPEFGAEVVKHLCRWLRANIVFGAADHPRGQGSVERLGGWLQEMLAKLCRSWSDRWDVFVSPAMWIKRTLPDTSLPSNMTPFEFLNGDSTASWRGASKISVKYDSPSRNGMN---------------------ELRVAARAKANASIERSSAGVGDVKDSLVLVGESESSRHRDHRGRELQHDLYTGP 1657          
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5JMP6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP6_9PHAE)

HSP 1 Score: 339 bits (870), Expect = 3.480e-97
Identity = 162/253 (64.03%), Postives = 198/253 (78.26%), Query Frame = 3
Query: 2730 DRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 3488
            D L +DI+ ID  S + N Y+LLVVD+A+  PFGFPL +KQ++GVAR LVE CLTFGVP  IRCDGG EF AEVVTHLCRWL+ DI FG ADHPR QGSVERLGGWLQEL A+LC++WP RW  YVSP++WIKRTLPD +LP  + PF+ LF R PRT+LDSLVP  +      GLDNFV+RRKQNLREVR+ LE+R +LR ++R + N TIERSS GVAV +   VLVRE  + R+RD RG++L+H++Y+GP
Sbjct:  418 DELQMDIVKIDLPSLTGNNYILLVVDRASKLPFGFPLETKQAVGVARVLVEQCLTFGVPNTIRCDGGSEFGAEVVTHLCRWLRTDIVFGAADHPRGQGSVERLGGWLQELPAKLCRSWPDRWDGYVSPSIWIKRTLPDTALPSHMIPFKRLFDRKPRTTLDSLVPLTDETGTEGGLDNFVKRRKQNLREVRIALERRHELRVAARAKANATIERSSAGVAVGRNSLVLVRETESRRYRDRRGRELQHDLYTGP 670          
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5K9B2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9B2_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 8.050e-84
Identity = 140/200 (70.00%), Postives = 165/200 (82.50%), Query Frame = 3
Query: 2712 RSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVERRKQNLREVRLVL 3311
            R +EPWD L +DIL IDT S++ N ++LLVVD+A+ FPFGFPL + Q++GVAR +VELCLT+GVP+ +RCD G EF A +V HLCRWL+A+I FG ADHPR QGSVERLGGWLQELLAELC+ WP RW EYVSPA+WIKRTLPD SLP  +TPFE LFGR PRTSLDSLVP  +  D+ RG+DNFVERRK NLREV LV+
Sbjct:  633 RPLEPWDELHMDILKIDTPSQTSNNHILLVVDRASKFPFGFPLETNQAVGVARVVVELCLTYGVPKTVRCDEGPEFGARLVKHLCRWLRANIVFGAADHPRGQGSVERLGGWLQELLAELCRPWPDRWDEYVSPAMWIKRTLPDTSLPTYMTPFEFLFGRKPRTSLDSLVPLTDEMDQERGVDNFVERRKHNLREVGLVM 832          
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5KNP4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP4_9PHAE)

HSP 1 Score: 311 bits (796), Expect = 1.070e-83
Identity = 156/328 (47.56%), Postives = 214/328 (65.24%), Query Frame = 3
Query: 2505 IAIPQSMVANILALVHVLHGHAGVGPTLALAREKFHWPTQVKDTREYVKAYSCRKRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 3488
            IA+P+ ++  +LAL H    H G   T  +   K+HWP+  KD R YV++  CR +KR  SRQ+ M+P+R + PW  L +DIL   T +   N+Y+L+VVD+AT F FGFPLP+K+++GV+RKL+EL L FG+P  IRCD G E  +E++ HLCRWLK  + FGPA+HPR QG+VER+G  L +LL+ELC+AWP RW EYV+ A W  R  PD+SLP  ++P+++LFGR PRT LD L P  + +    GL++ VE  ++   EV   L KR   +   R+  N  I R+S G     GD VLVRE A+T  RDG   KL H+ ++GP
Sbjct: 1147 IALPRRLIPGVLALAHGTFAHPGRARTTIIIAGKYHWPSLKKDVRRYVESCRCRMKKRQWSRQLRMLPARFLLPWQVLELDILDTKTVTALGNRYLLVVVDRATKFLFGFPLPTKETVGVSRKLLELILIFGLPLSIRCDPGRENTSEIMEHLCRWLKVSLDFGPANHPRGQGTVERMGAVLAQLLSELCQAWPQRWDEYVAIATWAHRMQPDESLPGNVSPYQMLFGRAPRTPLDQLSPSLDNSGSALGLESSVEETRRKHIEVTDALRKRQAEKNRHRDLQNARISRASPGAKSRVGDKVLVRESASTLHRDGVHPKLAHDHFTGP 1474          
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5KIS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS6_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 1.550e-81
Identity = 141/190 (74.21%), Postives = 167/190 (87.89%), Query Frame = 2
Query:  521 FSLQKREMIQAEIEKLVARGIIRRSMSPWAAQCLCVR--DGTLRLCIDWRVLNKHVVTDSGGLGDMQTIFDGLKGKRYFSQLDLASGFHQI*IAEKDRHETVFRDANGLLYEFTRAGFGLTVLPSAFTRTVKTALGSLKDVCSWLDDILTASDT*EQHIATLVVVLRRLKTAGLSVDLAKCMFGSASMEF 1084
            FS ++R MI+AEI++LV RG+IR+SMSPWAAQCLCV+  DGTLRLCIDWR LNK +V+DSGGLGDMQTIFDGLKGK+YF+QLDLASGFHQ+ IAEKDR++T FRDA+G+L+EFTRAGFGLTVLP+AFTR VK+ALG L  V SWLDDIL ASD+ E+H+ATL +VL RL  AGLSV+ AKC FG+AS EF
Sbjct:   24 FSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLAGVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCPFGAASQEF 213          
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5KBF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF4_9PHAE)

HSP 1 Score: 300 bits (768), Expect = 1.760e-81
Identity = 320/1091 (29.33%), Postives = 418/1091 (38.31%), Query Frame = 3
Query:  366 LQKQELVNVLSAFIKDSLFPIYPKRVPACIDGKLELPLINEFSTPFASKQRRFHCKRER*SKLKLRNW------------WPVV*FVDPCPRGPPSACA-----SETGLSDSA*TGVCSTNMW*LTAGVWAICKRFLTV*RANGIFHNSIWPLVFIKYKSP-RKTD------TRRSFGMPT--ACFTSSQEQGLDSLSCRPHLLEP*KQRWDR*KTSVVGWMTFSPQAT-----HESSTLQLLSSYCEG*KQQVYLLIWRNACLV-LHPWNFFGMIIDSSGIHPAPSKLEAIAAMPRSQTVEELRTFLGMTGYLRQFVEQYGVICAPLTDILRNKAFASKRARKCPIPRGKAADEAFNSIRSALASPTFFKKFEPK*KTNCSCISGP*SPFRNSYGCQCCGCWSSTHTKY*GSPTCYSFRKSPFFQDRCAPRTY*TRMHGCLVGSATL*AVCVR*AV*TGH*LLCANLAIS*P*SVSQAA*VGSTPHGTRHGTGVACGHQPRPPRCIVASTAQP*TGERRG*FFSR*RYVSPARPICRAPRA*FRWS--------PFSGSRSNSR*LPSA----KVAAMATVEQ----PVDVTPVENSSVAGPDEQSLLLYPSLPFAACDALPAQEPRRSTRRRTPSVRLQPFPPPVPLVYPPPHQETELTPVDTVVAEQSPGHFSFRDKGEVSEVRSAGGEVPSPRAVDQPRPSVPVDRAASILTDPNLPVAQQGSDPFRAQVWKRLEQPELQCVG*ARHRFVGVNDRNLIAIPQSMVANILALVHVLHGHAGVGPTLALAREKFHWPTQVKDTREYVKAYSCRKRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADE--RRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 3488
            LQKQELV VL+ F+++ LFPI PKRV AC   +LELPLI+EF TP A+KQRRF  +  R  + +++              W           G    C      ++  ++DS   G   T    L        KR+ T       FH  I      +YK+  R  D      TR  FG+    + FT   +  L  +                    V  W+     A      H ++ + +L+       +   L +    C+       F GMIID++G+HPAPSKLEAIA MPR QTVE+LRT                ++ APLTDILRNK FASKRARK PI  G+A + AF+ +R  LASPT     +P             +PF         G  ++      G+P   +F    F +             G L G                                              H      G Q +      A T                 ++  +R +C  P+   RW+                   LP A     VA+  +V+     P D T  ++++  GP    L     +  A        EP  S R +  S        P P+  PP H                P         +V EV SAGGE+P   AVD    S  + RA  +L +P+  + +Q  D    QV + L                                             G G                                                                                   G+ L  K                GV R        EF         +   ADIAFG ADH + QGSVERLGGW+QELLAELCK W  RW EYVSPA+WIKRTLPD S+ P +TPFELLFGR PRTSLDSLVP  +  +E    GLDNFVERR QNLREVRLVLEKR DLR ++R + N  I RS+  V V+KG+ V+VRE  ++R RD RG+KL+H++Y+GP
Sbjct:  274 LQKQELVEVLATFVEEGLFPIDPKRVAACGGTELELPLIDEFCTPHAAKQRRFSPEERRMIRAEIQQLLDRGIIRPSMSPWAAQCLCVKKKDGTMRLCIDWRVLNKLLVADSGGLGDMQTIFDGLKG------KRYFTQIDLASGFHQ-IEIAEKDRYKTAFRDADGMLYEFTRAGFGLTVLPSAFTRRVKSALGIVD------------------GVFSWLDDILVANETWEEHLAALVLVLTRL-----RAAGLSVNFPKCIFGASSQEFLGMIIDATGMHPAPSKLEAIANMPRPQTVEDLRT----------------LVAAPLTDILRNKDFASKRARKLPIQWGQAEEHAFHHLRQCLASPTVLAFPDPN------------APFELHSDASSVGAGATLLQTIDGTPRIIAFASHKFSRTDARRGPTERECMGVLWG--------------------------------------------VDHFKPYLAGRQFKVVTDCSALT-----------------WLFRSRELC--PKL-HRWALRLMEYDIGLEWRAGVHHVLPDALSRLPVASSPSVDVDDSFPDDFTSPDSATFVGPQGPVL---DGVRLADLTTEDESEPVLSARLQRASA-------PEPIELPPAHPP-------------EPVQLECTRSADVEEVLSAGGELPFRSAVDTG--STAIHRALRVLKNPDTLIRRQQDDALLGQVRRDL--------------------------------------------GGSGEA---------------------------------------------------------------------------------GYSLDDK----------------GVLRF-------EFE--------KGKLADIAFGVADHAQGQGSVERLGGWMQELLAELCKCWNDRWDEYVSPAIWIKRTLPDISVHPHMTPFELLFGRKPRTSLDSLVPLSDEGNEDPSGGLDNFVERRNQNLREVRLVLEKRHDLRVAARAKSNANISRSTASVTVEKGNLVMVREADSSRHRDKRGRKLQHDLYTGP 1061          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEH2_9PHAE6.010e-20241.26RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A6H5J7F8_9PHAE1.540e-13534.80Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KFK7_9PHAE4.360e-12936.46Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JV25_9PHAE1.610e-12768.18Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KZY5_9PHAE1.940e-9731.20Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JMP6_9PHAE3.480e-9764.03Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K9B2_9PHAE8.050e-8470.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KNP4_9PHAE1.070e-8347.56Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KIS6_9PHAE1.550e-8174.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBF4_9PHAE1.760e-8129.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig111contigP-littoralis_Contig111:413455..416956 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog6334.EFV51316
PFAMsRVT_1,rve,zf-H2C2
Model size3488
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.35e-28
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3A25R@33154|Opisthokonta,3BQ0A@33208|Metazoa,3E4KA@33213|Bilateria
DescriptionIntegrase core domain
Cds size966
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789442.999956-CDS-P-littoralis_Contig111:413454..4144201680789442.999956-CDS-P-littoralis_Contig111:413454..414420Pylaiella littoralis U1_48CDSP-littoralis_Contig111 413455..414420 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789443.011789-UTR-P-littoralis_Contig111:414420..4168881680789443.011789-UTR-P-littoralis_Contig111:414420..416888Pylaiella littoralis U1_48UTRP-littoralis_Contig111 414421..416888 -
1680789443.024699-UTR-P-littoralis_Contig111:416902..4169561680789443.024699-UTR-P-littoralis_Contig111:416902..416956Pylaiella littoralis U1_48UTRP-littoralis_Contig111 416903..416956 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig111.80.1prot_P-littoralis_Contig111.80.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig111 413455..414420 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig111.80.1

>prot_P-littoralis_Contig111.80.1 ID=prot_P-littoralis_Contig111.80.1|Name=mRNA_P-littoralis_Contig111.80.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=322bp
MVANILALVHVLHGHAGVGPTLALAREKFHWPTQVKDTREYVKAYSCRKR
KRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNF
PFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRW
LKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALW
IKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVE
RRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVRE
MAATRFRDGRGKKLRHEVYSGP
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mRNA from alignment at P-littoralis_Contig111:413455..416956-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig111.80.1 ID=mRNA_P-littoralis_Contig111.80.1|Name=mRNA_P-littoralis_Contig111.80.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3502bp|location=Sequence derived from alignment at P-littoralis_Contig111:413455..416956- (Pylaiella littoralis U1_48)
TGCATGCATTTTTTATAGTTTTTCTCCTTCATCTCTCGATTCCTTTTGCA TTTTATTTATTTATTTTATTTTTTATTTCGACCGTTTGTGTTCACACGGG TCGATACATGTGTTTTTTTTTTGTGCTTCTGTTTGTTTTGTTTGTCCCAC TTGTATGTTGTGCTACTCTAACATCCTTGACATGCATGCTTCTGAGACTC ACTTTGCCAGCCATCGCCTGCCGTGTGTATGGTACGCACAGCCGTCAACC TTGCTTGCGCCTGCCGTGTGTATTGTGCGCACAGCCGTCAACCTTGCTTT TGGACAGAACCAACCGCAGGGACAAGGTGCTTTGGGTTCTGCTGGCCAGC CCGACCCACAGTGGCGCAGCGCTGCTGGCCTACAGAAGCAGGAGCTCGTC AATGTCCTGTCGGCGTTCATTAAGGACAGTCTGTTTCCGATCTACCCCAA GCGAGTACCCGCCTGCATTGATGGTAAGCTAGAATTGCCTCTGATTAATG AGTTTAGTACGCCGTTTGCGTCTAAACAACGCCGTTTTCATTGCAAAAGA GAGAGATGATCCAAGCTGAAATTGAGAAACTGGTGGCCCGTGGTATAATT CGTCGATCCATGTCCCCGTGGGCCGCCCAGTGCCTGTGCGTCCGAGACGG GACTCTCAGACTCTGCATAGACTGGCGTGTGCTCAACAAACATGTGGTAA CTGACAGCGGGGGTTTGGGCGATATGCAAACGATTTTTGACGGTTTGAAG GGCAAACGGTATTTTTCACAACTCGATTTGGCCTCTGGTTTTCATCAAAT ATAAATCGCCGAGAAAGACAGACACGAGACGGTCTTTCGGGATGCCAACG GCCTGCTTTACGAGTTCACAAGAGCAGGGTTTGGACTCACTGTCTTGCCG TCCGCATTTACTCGAACCGTGAAAACAGCGTTGGGATCGTTGAAAGACGT CTGTAGTTGGCTGGATGACATTCTCACCGCAAGCGACACATGAGAGCAGC ACATTGCAACTCTTGTCGTCGTACTGCGAAGGCTGAAAACAGCAGGTTTA TCTGTTGATTTGGCGAAATGCATGTTTGGTTCTGCATCCATGGAATTTTT TCGGCATGATCATCGATAGTTCTGGCATTCACCCAGCTCCGTCCAAATTG GAAGCAATCGCCGCTATGCCTCGCTCCCAAACCGTAGAGGAATTGCGTAC CTTCCTGGGCATGACAGGTTACCTCCGTCAATTCGTCGAACAATACGGCG TGATCTGTGCTCCTCTCACCGACATATTGCGGAACAAAGCCTTCGCATCC AAACGTGCGCGCAAGTGTCCCATACCACGGGGGAAAGCTGCGGATGAAGC GTTCAATAGTATTCGATCTGCTTTGGCCTCACCCACTTTTTTTAAGAAAT TTGAACCCAAATAAAAAACAAATTGTTCTTGCATTTCCGGACCCTAATCG CCCTTTCGAAATTCATACGGATGCCAGTGCTGTGGGTGCTGGAGCAGTAC TCATACAAAATATTGAGGGAGTCCCACGTGTTATTCCTTTCGCAAGTCAC CGTTTTTCCAGGACAGATGCGCGCCGAGGACCTACTGAACGCGAATGCAT GGCTGTCTTGTGGGCAGTGCAACACTTTAGGCCGTATGTGTTAGGTAGGC AGTTTAAACTGGTCACTGATTGCTCTGCGCTAACTTGGCTATTTCGTAGC CGTGATCTGTGTCCCAAGCTGCATAGGTGGGCTCTACGCCTCATGGAACA CGACATGGTACTGGAGTGGCGTGCGGGCACCAACCACGTCCTCCCCGATG CATTGTCGCGTCTACCGCACAACCCTGAACCGGGGAAAGACGTGGATGAT TCTTTTCCCGATGACGGTACGTCAGCCCTGCCAGACCAATTTGTAGGGCC CCAAGGGCCTAGTTTAGATGGAGTCCTTTTAGCGGATCTCGAAGCAATAG CCGCTGACTACCTTCAGCCAAAGTTGCGGCGATGGCCACGGTAGAACAAC CGGTGGATGTGACGCCAGTCGAGAATTCCTCCGTAGCGGGGCCCGACGAA CAATCACTGCTTCTTTATCCTAGCCTACCTTTTGCTGCTTGCGACGCCTT GCCCGCACAAGAGCCCCGCCGCTCCACCCGCCGACGCACCCCGTCAGTGC GGCTTCAACCTTTCCCTCCGCCAGTACCCCTCGTGTACCCTCCACCACAT CAGGAAACCGAGCTGACGCCAGTTGACACCGTTGTCGCGGAACAATCCCC TGGACACTTTTCGTTCCGAGACAAGGGCGAAGTCAGCGAGGTTCGTTCTG CTGGGGGGGAGGTGCCGAGTCCACGAGCGGTAGATCAGCCAAGACCCTCG GTACCAGTTGACCGGGCTGCCAGTATACTGACCGACCCGAACTTGCCGGT GGCTCAACAAGGGAGTGACCCTTTTCGAGCCCAGGTTTGGAAACGTTTAG AACAGCCTGAGCTGCAATGTGTGGGATGAGCAAGGCATCGTTTCGTGGGG GTTAACGATAGGAACTTGATTGCTATCCCTCAGTCCATGGTAGCCAATAT ACTAGCACTAGTACACGTGTTACATGGTCATGCAGGTGTAGGTCCCACTC TAGCACTGGCTCGTGAAAAGTTTCACTGGCCTACACAGGTAAAGGATACT AGGGAATATGTGAAGGCGTACAGTTGTAGAAAAAGAAAGAGGTCAACCAG TAGACAAGTAGCAATGATGCCTAGTCGCAGCGTAGAACCGTGGGATAGAC TGGTAATCGACATCCTCGCCATCGACACCAAGTCGGAATCCCTTAACAAA TATGTCCTGCTAGTGGTGGACAAAGCCACCAATTTCCCTTTCGGTTTTCC TCTCCCTTCGAAACAATCTATTGGAGTGGCTCGTAAATTGGTAGAGCTGT GTCTAACGTTCGGAGTGCCCCGCATGATCCGATGCGATGGTGGAGGTGAG TTCAGGGCTGAAGTAGTAACGCATCTCTGCAGGTGGCTCAAAGCTGACAT AGCGTTTGGACCTGCCGATCACCCTAGGAGCCAGGGATCAGTAGAGAGAC TGGGGGGATGGTTGCAAGAACTACTAGCCGAATTGTGTAAAGCTTGGCCA CACAGATGGAGCGAATATGTGTCACCAGCGTTGTGGATCAAACGCACTTT GCCGGATCAATCGTTACCCCCCCCCTTGACTCCCTTTGAGCTGTTGTTCG GACGCCCGCCGCGCACGTCTTTAGACTCTTTGGTTCCATGCCCAGAGAGA GCAGATGAGAGACGAGGGTTGGATAACTTTGTCGAGCGACGCAAGCAAAA CTTGCGCGAAGTCCGCTTAGTGTTGGAGAAGCGTGCCGACTTACGAGCAT CCTCGAGAGAGCAGGTCAACGGCACTATCGAGCGGTCCTCCACTGGGGTC GCAGTAGACAAAGGAGACTGGGTTCTGGTTCGCGAGATGGCAGCCACCCG CTTTCGCGACGGCAGGGGGAAGAAGCTGCGGCACGAAGTCTACTCAGGAC CT
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Coding sequence (CDS) from alignment at P-littoralis_Contig111:413455..416956-

>mRNA_P-littoralis_Contig111.80.1 ID=mRNA_P-littoralis_Contig111.80.1|Name=mRNA_P-littoralis_Contig111.80.1|organism=Pylaiella littoralis U1_48|type=CDS|length=966bp|location=Sequence derived from alignment at P-littoralis_Contig111:413455..416956- (Pylaiella littoralis U1_48)
ATGGTAGCCAATATACTAGCACTAGTACACGTGTTACATGGTCATGCAGG
TGTAGGTCCCACTCTAGCACTGGCTCGTGAAAAGTTTCACTGGCCTACAC
AGGTAAAGGATACTAGGGAATATGTGAAGGCGTACAGTTGTAGAAAAAGA
AAGAGGTCAACCAGTAGACAAGTAGCAATGATGCCTAGTCGCAGCGTAGA
ACCGTGGGATAGACTGGTAATCGACATCCTCGCCATCGACACCAAGTCGG
AATCCCTTAACAAATATGTCCTGCTAGTGGTGGACAAAGCCACCAATTTC
CCTTTCGGTTTTCCTCTCCCTTCGAAACAATCTATTGGAGTGGCTCGTAA
ATTGGTAGAGCTGTGTCTAACGTTCGGAGTGCCCCGCATGATCCGATGCG
ATGGTGGAGGTGAGTTCAGGGCTGAAGTAGTAACGCATCTCTGCAGGTGG
CTCAAAGCTGACATAGCGTTTGGACCTGCCGATCACCCTAGGAGCCAGGG
ATCAGTAGAGAGACTGGGGGGATGGTTGCAAGAACTACTAGCCGAATTGT
GTAAAGCTTGGCCACACAGATGGAGCGAATATGTGTCACCAGCGTTGTGG
ATCAAACGCACTTTGCCGGATCAATCGTTACCCCCCCCCTTGACTCCCTT
TGAGCTGTTGTTCGGACGCCCGCCGCGCACGTCTTTAGACTCTTTGGTTC
CATGCCCAGAGAGAGCAGATGAGAGACGAGGGTTGGATAACTTTGTCGAG
CGACGCAAGCAAAACTTGCGCGAAGTCCGCTTAGTGTTGGAGAAGCGTGC
CGACTTACGAGCATCCTCGAGAGAGCAGGTCAACGGCACTATCGAGCGGT
CCTCCACTGGGGTCGCAGTAGACAAAGGAGACTGGGTTCTGGTTCGCGAG
ATGGCAGCCACCCGCTTTCGCGACGGCAGGGGGAAGAAGCTGCGGCACGA
AGTCTACTCAGGACCT
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