mRNA_P-littoralis_Contig111.80.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE) HSP 1 Score: 645 bits (1663), Expect = 6.010e-202 Identity = 465/1127 (41.26%), Postives = 582/1127 (51.64%), Query Frame = 3
Query: 366 LQKQELVNVLSAFIKDSLFPIYPKRVPACIDGKLELPLINEFSTPFASKQRRFHCKRER*SKLKLRNW------------WPVV*FVDPCPRGPPSACASETGL-----SDSA*TGVCSTNMW*LTAGVWAICKRFLTV*RANGIFHNSIWPLVFIKYKSP-RKTD------TRRSFGMPT--ACFTSSQEQGLDSLSCRPHLLEP*KQRWDR*KTSVVGWM------TFSPQATHESSTLQLLSSYCEG*KQQVYLLIWRNACLVLHPWNFFGMIIDSSGIHPAPSKLEAIAAMPRSQTVEELRTFLGMTGYLRQFVEQYGVICAPLTDILRNKAFASKRARKCPIPRGKAADEAFNSIRSALASPTF--FKKFEPK*KTNCSCISGP*SPFRNSYGCQCCGCWSSTHTKY*GSPTCYSFRKSPFFQD--RCAP---------------RTY*TRMHGCLVGSATL*AVCVR*AV*TGH*LLCANL---AIS*P*SVSQAA*VGSTPHGTRHGTGVACGHQPRPPRCIVASTAQP*TGERRG*FFSR*RYVSPARPICRAPRA*FRWSPFSGSRSNSR*LPSAKVAAMATVEQPVDVTPVENSSVAGPDEQS----LLLYPSLPFAACDALPAQE--PRRSTRRRTPSVRLQPFP----PPVPLVYPPPHQET-----------ELTPVDTVVAEQSPGHFSFRDKGEVSEVRSAGGEVPSPRAVDQPRPSVPVDRAASILTDPNLPVAQQGSDPFRAQVWKRLEQ-PELQCVG*ARHRF-VGVND---------RNLIAIPQSMVANILALVHVLHGHAGVGPTLALAREKFHWPTQVKDTREYVKAYSCRKRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 3488
L+K +LVNVL+AFI+D LFPI PKRVPAC++G+LELPLINEF TPFA+KQRRF + R + +++ W G C L SDS G T L K F + A+G I +YK+ R D TR FG+ A FT + L L+ V W+ + S + + TL L G I+ A F GMIIDS+G++PAPSKL+AIA MPR TVEELRTFLG+TGYLRQFV Y + APLT+ILRNKAFASKRARK PIP A ++AF S+R LASP F E PF G +S G +F F Q R P R Y LV + R LC L A+ + + G H A P VA+ + + P C A A P L ++A + V+ VD +S + P + L +LPFAAC A+ + PRRS R RTPSVRL+P PP ++ P +E +P + +PGH ++ EV +A GEV + + + +D A +LT P+ +Q D +QV K L + G R R+ +G +D R L AIP +MVA+I+ALVH LHGHAGVG TL+L R+ FHWPT DTR YV + +CR+RKR SR+VAMMP R +EPWD L +DIL IDT S++ N YVLLVVD+A+ FPFGFPL +KQ++GVAR +VELCLT+GVP+ +RCDGG EF AEVV HLCRWL+A I FG ADHPR QG+VERLGGWLQELLAELC+ WP RW EYVSPA+WIKRTLPD SLP +TPFELLFGR PRTSLDSLVP + D+ RGLDNFVERRKQNLREVRL LEKR +LR ++R + N +I+RSS GV V K VLVRE + R RD RG+KL+H++Y+GP
Sbjct: 636 LKKHQLVNVLAAFIEDGLFPIDPKRVPACMNGELELPLINEFCTPFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGK-----KYFTQLDLASGFHQMEIAEKD--RYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA------------------GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQ-----EFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLE--------------RPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRE------LCPKLHRWALR----LMEYDMELEWKAGVEHVVPDALSRLP------VANPVEVDVDDS-----------FPDDLSCAAGAAVEILGPE---------LKGVRLAELDPVQ--VDQVGDADSQPSHPTPEGADFHLSALRALPFAACAAVDHEPDAPRRSGRTRTPSVRLRPIGDAQLPPTSVLEALPDREAIGPSAVQASTPAPSPSTLPPSPVNPGH------DDIGEVLAARGEVTTSSSSHALDGASAIDLTARVLTRPSELAHRQRVDTHLSQVRKVLSNVADSSQGGSERDRYSLGTDDVIRYNDGKGRKLPAIPVAMVADIIALVHTLHGHAGVGATLSLLRDHFHWPTMTNDTRHYVLSCACRRRKRPPSRRVAMMPGRPLEPWDELQMDILKIDTPSQTGNNYVLLVVDRASKFPFGFPLKTKQAVGVARVVVELCLTYGVPKTVRCDGGPEFGAEVVKHLCRWLRASIVFGAADHPRGQGAVERLGGWLQELLAELCRFWPDRWDEYVSPAMWIKRTLPDTSLPSNMTPFELLFGRKPRTSLDSLVPLTDEMDQERGLDNFVERRKQNLREVRLALEKRQELRVAARAKANASIDRSSAGVGVMKESLVLVREFESCRHRDHRGRKLQHDLYTGP 1674
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5J7F8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7F8_9PHAE) HSP 1 Score: 456 bits (1173), Expect = 1.540e-135 Identity = 372/1069 (34.80%), Postives = 474/1069 (44.34%), Query Frame = 3
Query: 363 GLQKQELVNVLSAFIKDSLFPIYPKRVPACIDGKLELPLINEFSTPFASKQRRFHCKRER*SKLKLRNWWPVV*FVDPCPRGPPSACASETGLSDSA*TGVCSTNMW*LTAGVWAICKRFLTV*RANGIFHNSIWPLVFIKYKSPRKTDTRRSFGMPTACFTSSQEQG------LDSLSCRPHLLEP*KQRWDR*KTSVVGWMTFSPQATHESSTLQLLSSYCEG*KQQVYLLIWRNACLVLHPWNFFGMIIDSSGIHPAPSKLEAIAAMPRSQTVEELRTFLGMTGYLRQFVEQYGVICAPLTDILRNKAFASKRARKCPIPRGKAADEAFNSIRSALASPTFFK------KFEPK*KTNCSCISGP*SPFRNSYGCQCCGCWSSTHTKY*GSPTCYSFRKSPFFQDRCAPRTY*TRMHGCLVGSATL*AVCVR*AV*TGH*LLCANLAIS*P*SVSQAA*VGSTPHGTRHGTGVACGHQPRPPRCIVASTAQP*TGERRG*FFSR*RYVSPARPICRAPRA*FRWSPFSGSRSNSR*LPSAKVAAMATVEQPVDVTPVENSSVAGPDEQSLLLYPSLPFAACDALPAQ--EPRRSTRRRTPSVRLQPFPPPVPLVYPPPHQETEL---------TPVDTVVAEQSPGHFSF----RDKGEVSEVRSAGGEVPSPRAVDQPRPSVPVDRAASILTDPNLPVAQQGSDPFRAQVWKRLEQPELQCVG*ARHRFVGVNDRNLIAIPQSMVANILALVHVLHGHAGVGPTLALAREKFHWPTQVKDTREYVKAYSCRKRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 3488
G KQ+LV VL+AFI+ LFPI PKRVPAC++G+L+ PLINEF TPFA+KQRR + R + + VD GV +M WA + L V + G + I ++ K S G+ +G LD S + K R+ +T P A ++VY + GMIIDS+G++PAPSKL AI MPR TVEELRTFLG+TGYLRQFV + + APLT+ILR+KAFASKRARK PIP A ++AF +R LASPT + FE GP R G WS + P+ R L S L R A+ + + V G H A P VA TA+ S R + A ++ P G + +L +LPFA L A+ E RRS R RTPSV L+P + V PP ET L TPV+ V R ++ EV +A G+VP R + +DRAA +LT P++ +AQ+ RKR S++VAMMP R +EPW+ L +DIL ID S + N Y+LLVVD+A+ FPFGFPL +KQ++G AR LVELC TFGVPR I CDGG F AEVV H CRWL+ADI F ADHPR QG+VERL WLQELLAELC++WP RW +Y+ P++WIK TLPD LP +TPFELLFGR P T+LDSLVP + GLDNFVERRKQNLREVR+VLE+ +LR ++R + N T E+SS GVAV + VL+RE + R RD R +KL+H++Y+GP
Sbjct: 531 GFLKQQLVEVLAAFIEGGLFPIDPKRVPACMNGELQRPLINEFCTPFAAKQRRLSPEERRMIRADAQQ------VVD---------------------RGVIGRSM-----SPWA--AQCLCVKKKGGTLR------LCIDWRELNKLLVSDSGGLGDMHALFDGLKGNKYFTQLDLASGFHQMEIAEKDRFG---------LTVPPAAF----------------TRRVY---FAKCIFGAASQESLGMIIDSTGLYPAPSKLVAIGRMPRPHTVEELRTFLGLTGYLRQFVPNHSLTAAPLTNILRSKAFASKRARKLPIPWTTAEEDAFQPLRGTLASPTTIEGVTRAVAFESHRFLLTDARRGP---TRECMGVL----WSVDYFH-------------PYLAGRQFKLVTDCSALRWLFRSRELCPKLHRWAL-----------------RLMEYDMVLEWKAGVEHVVPDALSQFP------VAGTAEV---------------------------------------SKGRTAQTEDAVAYVSLPPPAQ----------GAVDSNLSALRALPFAMGAVLDAKPRELRRSGRTRTPSVPLKP----IGGVQLPPVGETGLLQDEQVAGPTPVEAVPPAXXXXXXXXSPVQRSHDDIGEVLAARGDVPRSSLGPDVRGTSAIDRAARVLTKPSI-LAQR-------------------------------------------------------------------------------------------RKRPQSKRVAMMPGRPLEPWNELQMDILKIDKPSLTGNNYILLVVDRASKFPFGFPLETKQAVGAARVLVELCPTFGVPRTIHCDGGSGFGAEVVKHPCRWLRADIVFSGADHPRGQGAVERLREWLQELLAELCRSWPDRWDDYLYPSIWIKLTLPDTVLPSHMTPFELLFGRKPGTTLDSLVPLTDETGAEGGLDNFVERRKQNLREVRMVLERWHELRVAARAKANATFEKSSAGVAVGRNSLVLIRETESRRHRDRRERKLQHDLYTGP 1343
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5KFK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK7_9PHAE) HSP 1 Score: 429 bits (1104), Expect = 4.360e-129 Identity = 358/982 (36.46%), Postives = 458/982 (46.64%), Query Frame = 3
Query: 366 LQKQELVNVLSAFIKDSLFPIYPKRVPACIDGKLELPLINEFSTPFASKQRRFHCKRER*SKLKLRNW------------WPVV*FVDPCPRGPPSACASETGL-----SDSA*TGVCSTNMW*LTAGVWAICKRFLTV*RANGIFHNSIWPLVFIKYKSP-RKTD------TRRSFGMPT--ACFTSSQEQGLDSLSCRPHLLEP*KQRWDR*KTSVVGWM------TFSPQATHESSTLQLLSSYCEG*KQQVYLLIWRNACLVLHPWNFFGMIIDSSGIHPAPSKLEAIAAMPRSQTVEELRTFLGMTGYLRQFVEQYGVICAPLTDILRNKAFASKRARKCPIPRGKAADEAFNSIRSALASPTF--FKKFEPK*KTNCSCISGP*SPFRNSYGCQCCGCWSSTHTKY*GSPTCYSFRKSPFFQD--RCAP---------------RTY*TRMHGCLVGSATL*AVCVR*AV*TGH*LLCANL---AIS*P*SVSQAA*VGSTPHGTRHGTGVACGHQPRPPRCIVASTAQP*TGERRG*FFSR*RYVSPARPICRAPRA*FRWSPFSGSRSNSR*LPSAKVAAMATVEQPVDVTPVENSSVAGPDEQS----LLLYPSLPFAACDALPAQE--PRRSTRRRTPSVRLQPFP----PPVPLVYPPPHQET-----------ELTPVDTVVAEQSPGHFSFRDKGEVSEVRSAGGEVPSPRAVDQPRPSVPVDRAASILTDPNLPVAQQGSDPFRAQVWKRLEQ-PELQCVG*ARHRF-VGVND---------RNLIAIPQSMVANILALVHVLHGHAGVGPTLALAREKFHWPTQVKDTREYVKAYSCRKRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQ 3053
L+K +LVNVL+AFI+D LFPI PKRVPAC++G+LELPLINEF TPFA+KQRRF + R + +++ W G C L SDS G T L K F + A+G I +YK+ R D TR FG+ A FT + L L+ V W+ + S + + TL L G I+ A F GMIIDS+G++PAPSKL+AIA MPR TVEELRTFLG+TGYLRQFV Y + APLT+ILRNKAFASKRARK PIP A ++AF S+R LASP F E PF G +S G +F F Q R P R Y LV + R LC L A+ + + G H A P VA+ + + P C A A P L ++A + V+ VD +S + P + L +LPFAAC A+ + PRRS R RTPSVRL+P PP ++ P +E +P + SPGH ++ EV +A GEV + + + +D A +LT P+ +Q D +QV K L + G R R+ +G +D R L AIP +MVA+I+ALVH LHGHAGVG TL+L R+ FHWPT DTR YV + +CR+RKR SR+VAMMP R +EPWD L +DIL IDT S++ N YV LVVD+A+ FPFGFPL +KQ++GVAR +VELCLT+GVP+ +RCDGG EF AEVV HLCRWL+A I FG ADHPR QG+ +Q
Sbjct: 114 LKKHQLVNVLAAFIEDGLFPIDPKRVPACMNGELELPLINEFCTPFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGK-----KYFTQLDLASGFHQMEIAEKD--RYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA------------------GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQ-----EFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLE--------------RPFELHTDASTLGVGASLMQTIDGVTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRE------LCPKLHRWALR----LMEYDMELEWKAGVEHVVPDALSRLP------VANPVEVDVDDS-----------FPDDLSCAAGAAVEILGPE---------LKGVRLAELDPVQ--VDQVGDADSQPSHPTPEGADFHLSALRALPFAACAAVDHEPDAPRRSDRTRTPSVRLRPIGDAQLPPTSVLEALPDREVIGPSAVQASTPAPSPSTLPPSPVSPGH------DDIGEVLAARGEVTTSSSSHALDGASAIDLTARVLTRPSELAHRQRVDTHLSQVRKVLSNVADSSQGGSERDRYSLGTDDVIRYNDGKGRKLPAIPVAMVADIIALVHTLHGHAGVGATLSLLRDHFHWPTMTNDTRHYVLSCACRRRKRPPSRRVAMMPGRPLEPWDELQMDILKIDTPSQTGNNYVFLVVDRASKFPFGFPLKTKQAVGVARVVVELCLTYGVPKTVRCDGGPEFGAEVVKHLCRWLRASIVFGAADHPRGQGAATEARSLVQ 1007
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5JV25_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV25_9PHAE) HSP 1 Score: 402 bits (1033), Expect = 1.610e-127 Identity = 195/286 (68.18%), Postives = 231/286 (80.77%), Query Frame = 3
Query: 2631 DTREYVKAYSCRKRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 3488
DTR V + +CR RKR SR+VAMM R +EPWD L +DIL IDT S++ N YVLLVVD+A+ FPFGFPL +KQ++GVAR VELCLT+GVP+ +RCDGG EF AEVV HLCRWL+A+I FG DHPR QG+VERLGGWLQELLAELC++WP RW EYVSPA+WIKRTLPD SLP +TPFELLFGR PRTSLDSLVP + D+ RGLDNFVERRKQNLREVRL LEKR +LR ++R + N +IERSS GV V K VLVRE ++R RD RG+KL+H++Y+GP
Sbjct: 4 DTRHCVLSCACRTRKRPPSRRVAMMSGRPLEPWDELQMDILKIDTPSQTGNNYVLLVVDRASKFPFGFPLKTKQAVGVARVAVELCLTYGVPKTVRCDGGPEFGAEVVKHLCRWLRANIVFGATDHPRGQGAVERLGGWLQELLAELCRSWPDRWDEYVSPAMWIKRTLPDTSLPSNMTPFELLFGRKPRTSLDSLVPLTDEMDQERGLDNFVERRKQNLREVRLALEKRQELRVAARAKANASIERSSAGVGVMKDSLVLVRESESSRHRDHRGRKLQHDLYTGP 289
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5KZY5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZY5_9PHAE) HSP 1 Score: 352 bits (903), Expect = 1.940e-97 Identity = 337/1080 (31.20%), Postives = 447/1080 (41.39%), Query Frame = 3
Query: 309 QGALGSAGQPDPQWRSAAGLQKQELVNVLSAFIKDSLFPIYPKRVPACIDGKLELPLINEFSTPFASKQRRFHCKRER*SKLKLRNWWPVV*FVDPCPRGPPSA-CASETGLSDSA*TGVCSTNMW*LTAGVWAICKRFLTV*RAN-GIFHNSIWPLVFIKYKSPRKTDTRRSFGMPTACFTSSQEQGLDSLSCRPHLLEP*KQRWDR*KTSVVGWMT--FSPQATHESS----TLQLLSSYCEG*KQQVYLLIWRNACLVLHPWNFFGMIIDSSGIHPAPSKLEAIAAMPRSQTVEELRTFLGMTGYLRQFVEQYGVICAPLTDILRNKAFASKRARKCPIPRGKAADEAFNSIRSALASPTFFKKFEPK*KTNCSCISGP*SPFRNSYGCQCCGCWSSTHTKY*GSPTCYSFRKSPFFQDRCAPRTY*TRMHGCLVGSATL*AV--CVR*AV*TGH*LLCANLAIS*P*SVSQAA*VGSTPHGTRHGTGVACGHQPRPPRCIVASTAQP*TGERRG*FFSR*RYVSPARPICRAPRA*FRWSPFSGSRSNSR*LPSAKVAAMATVEQPVDVTPVENSSVAGPDEQSLLLYPSLPFAACDALPAQEPRRSTRRRTPSVRLQPF-----PPPVPLVYPPPHQETELTPVDTVVAEQSPGHFSFRD----KGEVSEVRSAGGEVPSPRAVDQPRPSVPVDRAASILTDPNLPVAQQGSDPFRAQVWKRLEQPELQCVG*ARHRFVGVNDRNLIAIPQSMVANILALVHVLHGHAGVGPTLALAREKFHWPTQVKDTREYVKAYSCRKRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLD-SLVPCPERADERRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 3488
QGA+ + D + L++Q+L NVL+AFI+D LFPI PKRVPACI+G+LEL LINEF TPFA+KQR F + R ++ N V P +A C D+ +C W + L G L K+K PRKT TRR F M CF + L +S HL + V W+ T E TL L G I+ A F GMII+S+ ++PAPSKL+ IA MPR TV+ELRTFLG++GYL + V AF S+R LASP K + D P T VG++ + + R H SQ R G P C+ A A V RP + N +P A + V PV+V V++S PD+ LL P+ + P + RR+ R PSVRL+P PP L P + T V++ +P ++ EV +A GE P+ + + +D A +LT P+ +Q D QV K L G G G C +RKR SR+VAM+ R +EPWD L +DIL IDT S++ N Y+LLVVD+A+ FP GFPL +KQ++GVAR +VELCLT+GVP+ +RCDGG EF AEVV HLCRWL+A+I FG ADHPR QGSVERLGGWLQE+LA+LC++W RW +VSPA+WIKRTLPD SLP +TPFE L G + S + + R G++ +LR ++R + N +IERSS GV K VLV E ++R RD RG++L+H++Y+GP
Sbjct: 846 QGAVVGVARADANLGTLGSLKQQQLGNVLAAFIEDGLFPIDPKRVPACINGELELLLINEFCTPFAAKQRLFSPEERR--IIRAENQQLEDRGVIRQSMSPWAAQCLCVKKKDDTL--RLCID---------WRELNKLLVSDSGGFGDMQTIFDGLKGKKWKPPRKTVTRRPFEMRMECFGNL----LARVSALEHL------------SGVFSWLDDILIASDTWEEHLVTLTLVLNRLLAAGRSVNFAKCIFGAASQ-----EFLGMIIESTDLYPAPSKLDTIARMPRPLTVKELRTFLGLSGYLPEEV-------------------------------------AFQSLRETLASP-----------------------------------------------------KVLAYPDLERPFELHTDASTLRVGASLMQTIDGVTRAVAFASH-------------RFSQT--------DARRG--------PTERECMGALWA-----------------VDHFRPWALRLMEYDMELEWKAGVENV--VPDA--LSRLPVANPVEVD-VDDSI---PDD---LLSPAAGASVEILGPELDGRRT---RIPSVRLRPIDDAQLPPTSVLEAIPDREAIGPTTVESSAPAPAPSTLPPSPVRPGHDDIGEVLAARGEFPTSSSSQAIGGASAIDLTARVLTRPSELAHRQRDDTHLGQVRKVLSNGADSSRG------------------------------------GSG---------------------------CDRRKRPLSRRVAMVAGRPLEPWDELQMDILKIDTPSQTGNNYILLVVDRASKFPIGFPLETKQAVGVARVVVELCLTYGVPKTVRCDGGPEFGAEVVKHLCRWLRANIVFGAADHPRGQGSVERLGGWLQEMLAKLCRSWSDRWDVFVSPAMWIKRTLPDTSLPSNMTPFEFLNGDSTASWRGASKISVKYDSPSRNGMN---------------------ELRVAARAKANASIERSSAGVGDVKDSLVLVGESESSRHRDHRGRELQHDLYTGP 1657
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5JMP6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP6_9PHAE) HSP 1 Score: 339 bits (870), Expect = 3.480e-97 Identity = 162/253 (64.03%), Postives = 198/253 (78.26%), Query Frame = 3
Query: 2730 DRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 3488
D L +DI+ ID S + N Y+LLVVD+A+ PFGFPL +KQ++GVAR LVE CLTFGVP IRCDGG EF AEVVTHLCRWL+ DI FG ADHPR QGSVERLGGWLQEL A+LC++WP RW YVSP++WIKRTLPD +LP + PF+ LF R PRT+LDSLVP + GLDNFV+RRKQNLREVR+ LE+R +LR ++R + N TIERSS GVAV + VLVRE + R+RD RG++L+H++Y+GP
Sbjct: 418 DELQMDIVKIDLPSLTGNNYILLVVDRASKLPFGFPLETKQAVGVARVLVEQCLTFGVPNTIRCDGGSEFGAEVVTHLCRWLRTDIVFGAADHPRGQGSVERLGGWLQELPAKLCRSWPDRWDGYVSPSIWIKRTLPDTALPSHMIPFKRLFDRKPRTTLDSLVPLTDETGTEGGLDNFVKRRKQNLREVRIALERRHELRVAARAKANATIERSSAGVAVGRNSLVLVRETESRRYRDRRGRELQHDLYTGP 670
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5K9B2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9B2_9PHAE) HSP 1 Score: 301 bits (772), Expect = 8.050e-84 Identity = 140/200 (70.00%), Postives = 165/200 (82.50%), Query Frame = 3
Query: 2712 RSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVERRKQNLREVRLVL 3311
R +EPWD L +DIL IDT S++ N ++LLVVD+A+ FPFGFPL + Q++GVAR +VELCLT+GVP+ +RCD G EF A +V HLCRWL+A+I FG ADHPR QGSVERLGGWLQELLAELC+ WP RW EYVSPA+WIKRTLPD SLP +TPFE LFGR PRTSLDSLVP + D+ RG+DNFVERRK NLREV LV+
Sbjct: 633 RPLEPWDELHMDILKIDTPSQTSNNHILLVVDRASKFPFGFPLETNQAVGVARVVVELCLTYGVPKTVRCDEGPEFGARLVKHLCRWLRANIVFGAADHPRGQGSVERLGGWLQELLAELCRPWPDRWDEYVSPAMWIKRTLPDTSLPTYMTPFEFLFGRKPRTSLDSLVPLTDEMDQERGVDNFVERRKHNLREVGLVM 832
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5KNP4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP4_9PHAE) HSP 1 Score: 311 bits (796), Expect = 1.070e-83 Identity = 156/328 (47.56%), Postives = 214/328 (65.24%), Query Frame = 3
Query: 2505 IAIPQSMVANILALVHVLHGHAGVGPTLALAREKFHWPTQVKDTREYVKAYSCRKRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 3488
IA+P+ ++ +LAL H H G T + K+HWP+ KD R YV++ CR +KR SRQ+ M+P+R + PW L +DIL T + N+Y+L+VVD+AT F FGFPLP+K+++GV+RKL+EL L FG+P IRCD G E +E++ HLCRWLK + FGPA+HPR QG+VER+G L +LL+ELC+AWP RW EYV+ A W R PD+SLP ++P+++LFGR PRT LD L P + + GL++ VE ++ EV L KR + R+ N I R+S G GD VLVRE A+T RDG KL H+ ++GP
Sbjct: 1147 IALPRRLIPGVLALAHGTFAHPGRARTTIIIAGKYHWPSLKKDVRRYVESCRCRMKKRQWSRQLRMLPARFLLPWQVLELDILDTKTVTALGNRYLLVVVDRATKFLFGFPLPTKETVGVSRKLLELILIFGLPLSIRCDPGRENTSEIMEHLCRWLKVSLDFGPANHPRGQGTVERMGAVLAQLLSELCQAWPQRWDEYVAIATWAHRMQPDESLPGNVSPYQMLFGRAPRTPLDQLSPSLDNSGSALGLESSVEETRRKHIEVTDALRKRQAEKNRHRDLQNARISRASPGAKSRVGDKVLVRESASTLHRDGVHPKLAHDHFTGP 1474
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5KIS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS6_9PHAE) HSP 1 Score: 284 bits (727), Expect = 1.550e-81 Identity = 141/190 (74.21%), Postives = 167/190 (87.89%), Query Frame = 2
Query: 521 FSLQKREMIQAEIEKLVARGIIRRSMSPWAAQCLCVR--DGTLRLCIDWRVLNKHVVTDSGGLGDMQTIFDGLKGKRYFSQLDLASGFHQI*IAEKDRHETVFRDANGLLYEFTRAGFGLTVLPSAFTRTVKTALGSLKDVCSWLDDILTASDT*EQHIATLVVVLRRLKTAGLSVDLAKCMFGSASMEF 1084
FS ++R MI+AEI++LV RG+IR+SMSPWAAQCLCV+ DGTLRLCIDWR LNK +V+DSGGLGDMQTIFDGLKGK+YF+QLDLASGFHQ+ IAEKDR++T FRDA+G+L+EFTRAGFGLTVLP+AFTR VK+ALG L V SWLDDIL ASD+ E+H+ATL +VL RL AGLSV+ AKC FG+AS EF
Sbjct: 24 FSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLAGVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCPFGAASQEF 213
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5KBF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF4_9PHAE) HSP 1 Score: 300 bits (768), Expect = 1.760e-81 Identity = 320/1091 (29.33%), Postives = 418/1091 (38.31%), Query Frame = 3
Query: 366 LQKQELVNVLSAFIKDSLFPIYPKRVPACIDGKLELPLINEFSTPFASKQRRFHCKRER*SKLKLRNW------------WPVV*FVDPCPRGPPSACA-----SETGLSDSA*TGVCSTNMW*LTAGVWAICKRFLTV*RANGIFHNSIWPLVFIKYKSP-RKTD------TRRSFGMPT--ACFTSSQEQGLDSLSCRPHLLEP*KQRWDR*KTSVVGWMTFSPQAT-----HESSTLQLLSSYCEG*KQQVYLLIWRNACLV-LHPWNFFGMIIDSSGIHPAPSKLEAIAAMPRSQTVEELRTFLGMTGYLRQFVEQYGVICAPLTDILRNKAFASKRARKCPIPRGKAADEAFNSIRSALASPTFFKKFEPK*KTNCSCISGP*SPFRNSYGCQCCGCWSSTHTKY*GSPTCYSFRKSPFFQDRCAPRTY*TRMHGCLVGSATL*AVCVR*AV*TGH*LLCANLAIS*P*SVSQAA*VGSTPHGTRHGTGVACGHQPRPPRCIVASTAQP*TGERRG*FFSR*RYVSPARPICRAPRA*FRWS--------PFSGSRSNSR*LPSA----KVAAMATVEQ----PVDVTPVENSSVAGPDEQSLLLYPSLPFAACDALPAQEPRRSTRRRTPSVRLQPFPPPVPLVYPPPHQETELTPVDTVVAEQSPGHFSFRDKGEVSEVRSAGGEVPSPRAVDQPRPSVPVDRAASILTDPNLPVAQQGSDPFRAQVWKRLEQPELQCVG*ARHRFVGVNDRNLIAIPQSMVANILALVHVLHGHAGVGPTLALAREKFHWPTQVKDTREYVKAYSCRKRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADE--RRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 3488
LQKQELV VL+ F+++ LFPI PKRV AC +LELPLI+EF TP A+KQRRF + R + +++ W G C ++ ++DS G T L KR+ T FH I +YK+ R D TR FG+ + FT + L + V W+ A H ++ + +L+ + L + C+ F GMIID++G+HPAPSKLEAIA MPR QTVE+LRT ++ APLTDILRNK FASKRARK PI G+A + AF+ +R LASPT +P +PF G ++ G+P +F F + G L G H G Q + A T ++ +R +C P+ RW+ LP A VA+ +V+ P D T ++++ GP L + A EP S R + S P P+ PP H P +V EV SAGGE+P AVD S + RA +L +P+ + +Q D QV + L G G G+ L K GV R EF + ADIAFG ADH + QGSVERLGGW+QELLAELCK W RW EYVSPA+WIKRTLPD S+ P +TPFELLFGR PRTSLDSLVP + +E GLDNFVERR QNLREVRLVLEKR DLR ++R + N I RS+ V V+KG+ V+VRE ++R RD RG+KL+H++Y+GP
Sbjct: 274 LQKQELVEVLATFVEEGLFPIDPKRVAACGGTELELPLIDEFCTPHAAKQRRFSPEERRMIRAEIQQLLDRGIIRPSMSPWAAQCLCVKKKDGTMRLCIDWRVLNKLLVADSGGLGDMQTIFDGLKG------KRYFTQIDLASGFHQ-IEIAEKDRYKTAFRDADGMLYEFTRAGFGLTVLPSAFTRRVKSALGIVD------------------GVFSWLDDILVANETWEEHLAALVLVLTRL-----RAAGLSVNFPKCIFGASSQEFLGMIIDATGMHPAPSKLEAIANMPRPQTVEDLRT----------------LVAAPLTDILRNKDFASKRARKLPIQWGQAEEHAFHHLRQCLASPTVLAFPDPN------------APFELHSDASSVGAGATLLQTIDGTPRIIAFASHKFSRTDARRGPTERECMGVLWG--------------------------------------------VDHFKPYLAGRQFKVVTDCSALT-----------------WLFRSRELC--PKL-HRWALRLMEYDIGLEWRAGVHHVLPDALSRLPVASSPSVDVDDSFPDDFTSPDSATFVGPQGPVL---DGVRLADLTTEDESEPVLSARLQRASA-------PEPIELPPAHPP-------------EPVQLECTRSADVEEVLSAGGELPFRSAVDTG--STAIHRALRVLKNPDTLIRRQQDDALLGQVRRDL--------------------------------------------GGSGEA---------------------------------------------------------------------------------GYSLDDK----------------GVLRF-------EFE--------KGKLADIAFGVADHAQGQGSVERLGGWMQELLAELCKCWNDRWDEYVSPAIWIKRTLPDISVHPHMTPFELLFGRKPRTSLDSLVPLSDEGNEDPSGGLDNFVERRNQNLREVRLVLEKRHDLRVAARAKSNANISRSTASVTVEKGNLVMVREADSSRHRDKRGRKLQHDLYTGP 1061 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig111.80.1 >prot_P-littoralis_Contig111.80.1 ID=prot_P-littoralis_Contig111.80.1|Name=mRNA_P-littoralis_Contig111.80.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=322bp MVANILALVHVLHGHAGVGPTLALAREKFHWPTQVKDTREYVKAYSCRKRback to top mRNA from alignment at P-littoralis_Contig111:413455..416956- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig111.80.1 ID=mRNA_P-littoralis_Contig111.80.1|Name=mRNA_P-littoralis_Contig111.80.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3502bp|location=Sequence derived from alignment at P-littoralis_Contig111:413455..416956- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig111:413455..416956- >mRNA_P-littoralis_Contig111.80.1 ID=mRNA_P-littoralis_Contig111.80.1|Name=mRNA_P-littoralis_Contig111.80.1|organism=Pylaiella littoralis U1_48|type=CDS|length=966bp|location=Sequence derived from alignment at P-littoralis_Contig111:413455..416956- (Pylaiella littoralis U1_48)back to top |