prot_P-littoralis_Contig1105.5.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1105.5.3
Unique Nameprot_P-littoralis_Contig1105.5.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length914
Homology
BLAST of mRNA_P-littoralis_Contig1105.5.3 vs. uniprot
Match: D7FXT3_ECTSI (TFIID and SAGA subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT3_ECTSI)

HSP 1 Score: 584 bits (1506), Expect = 5.960e-195
Identity = 497/943 (52.70%), Postives = 541/943 (57.37%), Query Frame = 0
Query:    1 MSSFRSNHLPDAPDLHQDILVKYLQTLGVTPETTKAIRDEVREDHEEXXXXXXXXXXXQGTG-------GGEDVRAFARRQGMEGAGGIRNGNNVMAWGILEGNPEKVEQAYRGLTEFVGSSWELYRPELEAVIFPVFVHCYLTLVMFDHRPERGSAGGEKEGAEWRGTAKSLMRAWGGEHEARYKDEMTLLRMVTTKEHAEASGYCQLVLTHKFRVKMCLATSKLLNAFLVNMGLLLVMHILNTRVKFILEERSPLPFAQIIRCGPDDAFPAALRRATS-----------ADDGDASXXXXXXXXXXXXXXXXXXXXXREKDLKWAAPPPMEVALLKQTERNAVASGLYYPLSLEPKAATNSSADTAAAAAGAXXXXXXXXXPATPTATAPTGLPATNGTTTASPNSAGGLTVNTGAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAASEVTEATARRHGGLRQKEVSLPLKPPPQPDLAGNWPYLRLTLRPLDSSQLKDTLSTPEGGARPFVANPLSPHVLMITFYNALDTMCCLKPTRDGMQVAAGFSDRMVRAWRTAPNAPHPPAADGTTMPSVSPPSSNGPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGPGLDDPVRLVGHSEPVHSVSWSPDGRFLLSAGGDGGVRLWDIARGRAGSSAGYVRYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTDSASPLRIFAGHIMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASACNRQGDGRNSIDSSASLAEQMEAAAGRGAGGVAGRKRKKGKDGGG-------------AAWSSRGDGPSHDPVHSFATRNTGVFNVLFTKRNLIIASGVCRSK 912
            MSS RS+ LP   D+  DI+VKYL+ LGVTPETT+AIRDEV     E            G         GG+DVRAFARRQGM+ A  +R+G++VMAWGILEG+PEKVEQAYRGL+EFV +SWELYRPELEAV+FPVFVHCYLTLVMFDH            GAE RG    LMRAWGGEHE R+KDEMTLL+MVT +EHAEAS YC+LVLTHKFRVK+CLATSKLLNAFLVN GLLLVMHILNTRV+F+LEERSPLPFAQ++RCGPDDAFPAALR  +S                                       +E+DLKWAA PPMEVAL+KQTER                                                                                                                               +VSLPLKPPPQPD   NWPYLRL LRPLDS+QLKDTLSTPEGGARPF+ANPLSPHV+M+TFYNA+DT+CCLKPTRDGMQ                                      NG + XXXXXXXX                     +  GL D VRLVGHS+PV+ VSWSPDGRFLLSAGGDGGVRLWDIARGR G SAG     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTD ASPLRIFAG    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            XXXXXXXXXXXXX                                      ASAC R GDGRN +DSSASLAEQM+A                                   A W SRGDGPS+ PVHSF TRNTGVFNVLFTKRNL+IASGVCR+K
Sbjct:    1 MSSSRSSRLPAPSDVDPDIVVKYLERLGVTPETTRAIRDEVERKKLEEKKARLLAGGDDGEXXXXXXXEGGDDVRAFARRQGMDAA--VRDGDSVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFDH------------GAEARG----LMRAWGGEHEERFKDEMTLLKMVTAREHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVNKGLLLVMHILNTRVQFVLEERSPLPFAQVVRCGPDDAFPAALRPRSSDXXXXXXXXXXXXXXXXXKATKEPAAPATTAGRGGGRGVQEEDLKWAAAPPMEVALMKQTER-------------------------------------------------------------------------------------------------------------------------------DVSLPLKPPPQPDPPENWPYLRLALRPLDSAQLKDTLSTPEGGARPFLANPLSPHVVMVTFYNAVDTLCCLKPTRDGMQ-------------------------------------RNGAAXXXXXXXXX---------------------QDSGLADTVRLVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDIARGRVGGSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTDCASPLRIFAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSGRLEGSALVXXXXXXXXXXXXX--------------------------------------ASACKRDGDGRNGVDSSASLAEQMKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPWPSRGDGPSYGPVHSFGTRNTGVFNVLFTKRNLVIASGVCRNK 702          
BLAST of mRNA_P-littoralis_Contig1105.5.3 vs. uniprot
Match: A0A6H5JH71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH71_9PHAE)

HSP 1 Score: 394 bits (1013), Expect = 8.010e-125
Identity = 300/434 (69.12%), Postives = 324/434 (74.65%), Query Frame = 0
Query:  254 QIIRCGPDDAFPAALRRATS-----------ADDGDASXXXXXXXXXXXXXXXXXXXXXREKDLKWAAPPPMEVALLKQTERNAVASGLYYPLSLEPKAATNSSADTAAAAAGAXXXXXXXXXPATPTATAPTGLPATNGTTTASPNSAGGLTVNTGAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------AAASEVTEATARRHGGLRQKEVSLPLKPPPQPDLAGNWPYLRLTLRPLDSSQLKDTLSTPEGGARPFVANPLSPHVLMITFYNALDTMCCLKPTRDGMQVAAGFSDRMVRAWRTAPNAPHPPAADGTT-MPSVSPPSSNGPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGP---GLDDPVRLVGHSEPVHSVSWSPDGRFLLSAGGDGGVRLWDIARGRAGSSAGYVRYD 661
            Q++RCGPDDAFPAALR  +S           A D   S        XXXXXXXXXXXX  E+DLKWAA PPMEVALLKQTER+A ASGLYYPLSLEPKA       T AA             P+ PTAT+P     TNGT  + P  A GLTVNT    XXXXXXXXXXXXXXXXXXXX     XXXX           AAA+EVTEATARRHGGLRQK+VSLPLKPPPQPD + NWPYLRL LRPLDS+QLKDTLSTPEGGARPF+ANPLSPHV+M+TF+NA+DT+CCLKPTRDGMQVAAGF+DRMVRAWRTAPNAPHPP AD T  +P+ +         XXXXXXXXXXXXXXXXXXXXXXXXXXXX       GL D VRLVGHS+PV+ VSWSPDGRFLLSAGGDGGVRLWDIARGR GSSAGYVRYD
Sbjct:   41 QVVRCGPDDAFPAALRPRSSDEDKSKEESEAARDSPPSKATKEPVAXXXXXXXXXXXXVEEEDLKWAAAPPMEVALLKQTERDAAASGLYYPLSLEPKATKTDPPTTTAAV------------PSRPTATSP----GTNGTANSPPAVATGLTVNTTGXXXXXXXXXXXXXXXXXXXXXXSAIPTXXXXXXXXXXRASRVAAAAEVTEATARRHGGLRQKQVSLPLKPPPQPDPSENWPYLRLALRPLDSAQLKDTLSTPEGGARPFLANPLSPHVVMVTFFNAVDTLCCLKPTRDGMQVAAGFTDRMVRAWRTAPNAPHPPTADETAAVPARTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGLSDTVRLVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDIARGRVGSSAGYVRYD 458          
BLAST of mRNA_P-littoralis_Contig1105.5.3 vs. uniprot
Match: A0A6H5JEL6_9PHAE (TFIID_NTD2 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL6_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 2.090e-69
Identity = 132/210 (62.86%), Postives = 151/210 (71.90%), Query Frame = 0
Query:    1 MSSFRSNHLPDAPDLHQDILVKYLQTLGVTPETTKAIRDEVREDHEEXXXXXXXXXXXQGTGG-------GEDVRAFARRQGMEGAGGIRNGNNVMAWGILEGNPEKVEQAYRGLTEFVGSSWELYRPELEAVIFPVFVHCYLTLVMFDHRPERGSAGGEKEGAEWRGTAKSLMRAWGGEHEARYKDEMTLLRMVTTKEHAEASGYCQLV 203
            MSS RS+ LP   D+  DI+VKYL+ LGVTPETT+AIRDEV     E            G  G       G+DVRAFA RQGM+ A  +R+G++VMAWGILEG+PEKVEQAYRGL+EFV +SWELYRPELEAV+FPVFVHCYLTLVMFDH            GAE RG    LMRAWGGEHE R+KDEMTLL+MVT +EHAEAS YC+LV
Sbjct:    1 MSSSRSSRLPAPSDVDPDIVVKYLERLGVTPETTRAIRDEVERKRLEEKKARLLAGGDDGEDGSPGXGEGGDDVRAFAIRQGMDAA--VRDGDSVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFDH------------GAEARG----LMRAWGGEHEERFKDEMTLLKMVTAREHAEASDYCKLV 192          
BLAST of mRNA_P-littoralis_Contig1105.5.3 vs. uniprot
Match: A0A2P4WVH9_9STRA (Transcription initiation factor TFIID subunit (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WVH9_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 3.730e-17
Identity = 73/255 (28.63%), Postives = 121/255 (47.45%), Query Frame = 0
Query:    1 MSSFRSNHLPDAPDLH----QDILVKYLQTLGVTPETTKAIRDEVREDHEEXXXXXXXXXXXQGTGGGEDVRA--FARRQGMEGAGGIRNGNNVMAWGILEGNPEKVEQAYRGLTEFVGSSWELYRPELEAVIFPVFVHCYLTLVMFDHRPERGSAGGEKEGAEWRGTAKSLMRAWGGEHEARYKDEMTLLRMVTTKEHAEASGYCQLVLTHKFRVKMCLATSKLLNAFLVNMGLLLVMHILNTRVKFILEERSP 249
            +++ RS   P   D H     ++L+KYLQT G      +    +  E+                    EDV    +AR+ G+         N+++ +G+  GNPE  ++AY  L +++ +S ++YR EL AV FPVFVHC+L L+         S G  + G       +S    +  +H   + +E+ +L +V + +H   + Y + VL  KF V+M L + +LLN FL    L L++ I+N RV  ++    P
Sbjct:   30 VATLRSLERPATADAHASVMDELLLKYLQTRGYHVSKGETHAPQATEEERRRLLGDQAARI-------EDVSIDKYARQLGLTTE--ACTANHLLFYGLTGGNPEAYDEAYEKLLDWICNSLDMYRNELHAVAFPVFVHCFLELL---------SKGFVEAG-------RSFFHRYATDHTRLHLEELRMLSIVFSPQHLRENEYVREVLHSKFNVEMSLLSFELLNTFLSQERLFLLLSIVNERVNLVVTSNQP 259          
BLAST of mRNA_P-littoralis_Contig1105.5.3 vs. uniprot
Match: A0A6H5JET0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET0_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 8.290e-17
Identity = 39/45 (86.67%), Postives = 41/45 (91.11%), Query Frame = 0
Query:  868 AAWSSRGDGPSHDPVHSFATRNTGVFNVLFTKRNLIIASGVCRSK 912
            A W SRGDGPSH PVHSF TRNTGVFNVLFTKRNL+IASGVCR+K
Sbjct:   39 APWPSRGDGPSHGPVHSFGTRNTGVFNVLFTKRNLVIASGVCRNK 83          
BLAST of mRNA_P-littoralis_Contig1105.5.3 vs. uniprot
Match: A0A5D6XMW3_9STRA (TFIID_NTD2 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMW3_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.430e-16
Identity = 63/164 (38.41%), Postives = 89/164 (54.27%), Query Frame = 0
Query:   86 NNVMAWGILEGNPEKVEQAYRGLTEFVGSSWELYRPELEAVIFPVFVHCYLTLVMFDHRPERGSAGGEKEGAEWRGTAKSLMRAWGGEHEARYKDEMTLLRMVTTKEHAEASGYCQLVLTHKFRVKMCLATSKLLNAFLVNMGLLLVMHILNTRVKFILEERSP 249
            N+++ +G+  G+P   E AY  L E++ +S ++Y+ EL AV FP+FVHC+L LV          A G  E A       + +R    +H   +  E+ LL MV T  H  AS Y Q VL  KF V+M L + +LLNAFL +  L L++ ILN RV  I+    P
Sbjct:  129 NHILFYGMTGGDPSTYEHAYTQLMEWICNSLDMYKYELHAVAFPMFVHCFLELV----------AKGFAEHAS------AFLRRHAADHTRLHLAELRLLSMVLTPAHVRASEYAQQVLHSKFNVQMSLLSFELLNAFLGHEQLFLLLAILNERVNLIVTANQP 276          
BLAST of mRNA_P-littoralis_Contig1105.5.3 vs. uniprot
Match: I2CPL9_NANGC (Transcription initiation factor tfiid subunit (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPL9_NANGC)

HSP 1 Score: 88.2 bits (217), Expect = 8.730e-16
Identity = 58/177 (32.77%), Postives = 93/177 (52.54%), Query Frame = 0
Query:   81 GIRNGNNVMAWGILEGNPEKVEQAYRGLTEFVGSSWELYRPELEAVIFPVFVHCYLTLVMFDHRPERGSAGGEKEGAEWRGTAKSLMRAWGGEHEARYKDEMTLLRMVTTKEHAEA-SGYCQLVLTHKFRVKMCLATSKLLNAFLVNMGLLLVMHILNTRVKFILEERSPLPFAQII 256
            G  N + ++   +   +P    + Y  L  +  ++ E Y+PEL  V FPVFVH YL LV      ERG              A++ ++ WG +H   Y+ E+  L  V   +H  A +G+ +  LT KF +++C  + +LL +FL +  LLL+M ILN +V  ++EER P+P  Q++
Sbjct:   65 GEANQSALLFRSLRMSDPMLYHRNYNELQTWTCNALEAYKPELLTVAFPVFVHSYLKLV------ERGMIE----------AARAFLQTWGPDHAETYQLELRSLTAVQRPDHLTAGNGFVKRALTDKFVLRLCSISYRLLQSFLSDHNLLLIMEILNEQVHVVVEERPPMPRFQVV 225          
BLAST of mRNA_P-littoralis_Contig1105.5.3 vs. uniprot
Match: A0A6A5ANV2_9STRA (TFIID_NTD2 domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ANV2_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 3.100e-15
Identity = 59/179 (32.96%), Postives = 92/179 (51.40%), Query Frame = 0
Query:   86 NNVMAWGILEGNPEKVEQAYRGLTEFVGSSWELYRPELEAVIFPVFVHCYLTLVMFDHRPERGSAGGEKEGAEWRGTAKSLMRAWGGEHEARYKDEMTLLRMVTTKEHAEASGYCQLVLTHKFRVKMCLATSKLLNAFLVNMGLLLVMHILNTRVKFILEERSP-LPFAQIIRCGPDDA 263
            N+V+  G+ +G+P   E+AY  L  ++G+S ++Y+ EL AV FP+FVHCYL LV   H                   AK+       +H+  +K E+  L  V T+EH   + Y + VL  KF V++ L   +LL+ FL +  + L++ ILN RV   ++   P L  AQ     P ++
Sbjct:   48 NHVLFHGMNKGDPAAYERAYTTLLAWIGNSLDMYKLELHAVAFPLFVHCYLELVAKGHAD----------------AAKAYFTRHAKDHQRLHKHEIRSLGSVLTREHLGLNEYAKQVLHSKFHVQLSLLGFQLLHTFLSDHQMFLLLCILNDRVTISVQANHPSLTIAQCDTLAPHES 210          
BLAST of mRNA_P-littoralis_Contig1105.5.3 vs. uniprot
Match: A0A6A4A244_9STRA (TFIID_NTD2 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4A244_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 3.760e-15
Identity = 69/245 (28.16%), Postives = 115/245 (46.94%), Query Frame = 0
Query:   18 DILVKYLQTLG-------------VTPETTKAIRDEVREDHEEXXXXXXXXXXXQGTGGGEDVRAFARRQGMEGAGGIRNGNNVMAWGILEGNPEKVEQAYRGLTEFVGSSWELYRPELEAVIFPVFVHCYLTLVMFDHRPERGSAGGEKEGAEWRGTAKSLMRAWGGEHEARYKDEMTLLRMVTTKEHAEASGYCQLVLTHKFRVKMCLATSKLLNAFLVNMGLLLVMHILNTRVKFILEERSP 249
            ++L+KYLQ+ G             V P+ T+  R  +  DH                     +  FAR+ G+         N+++ +G+  GNPE  ++AY  L +++ +S ++YR EL AV FP+FVHCYL L+         S G  + G       +S    +  +H   + +E+  L +V + +H   + Y + VL  KF V+M L + +LLN FL    L L++ I+N R+  ++    P
Sbjct:   54 ELLLKYLQSRGYHVSKGNAHQVSGVPPQATEDERRRLLGDHAARIEYA-------------SIDTFARQLGLSTE--ACTANHLLFYGLTGGNPEAYDEAYGKLLDWICNSLDMYRNELHAVAFPIFVHCYLELL---------SKGFVEAG-------RSFFHKYSADHTRLHLEELRTLSLVFSPQHLRENDYVREVLHSKFNVEMSLLSFELLNTFLSQERLFLLLSIVNERINLVVTSNQP 267          
BLAST of mRNA_P-littoralis_Contig1105.5.3 vs. uniprot
Match: A0A067CL81_SAPPC (TFIID_NTD2 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CL81_SAPPC)

HSP 1 Score: 90.5 bits (223), Expect = 7.250e-15
Identity = 57/164 (34.76%), Postives = 90/164 (54.88%), Query Frame = 0
Query:   86 NNVMAWGILEGNPEKVEQAYRGLTEFVGSSWELYRPELEAVIFPVFVHCYLTLVMFDHRPERGSAGGEKEGAEWRGTAKSLMRAWGGEHEARYKDEMTLLRMVTTKEHAEASGYCQLVLTHKFRVKMCLATSKLLNAFLVNMGLLLVMHILNTRVKFILEERSP 249
            N+V+  G+ + +P   E AY  L +++G++ ++Y+ EL A+ FP+FVHCYL LV          A G  E       AK+  R    +HE  ++ E+  L  V T+EH   + Y + VL  KF+VK+ L T +LL+ FL +  + L+++ILN RV   +    P
Sbjct:   56 NHVLFHGMNKADPNAYEHAYSKLLQWIGNALDMYKLELHAIAFPLFVHCYLELV----------AKGFTE------PAKAFFRRHAKDHERLHRLELRQLGCVLTREHLTLNEYAKQVLHAKFQVKLSLLTFQLLHTFLSDYQMFLLLYILNERVNIAVTSNHP 203          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1105.5.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXT3_ECTSI5.960e-19552.70TFIID and SAGA subunit n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JH71_9PHAE8.010e-12569.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEL6_9PHAE2.090e-6962.86TFIID_NTD2 domain-containing protein (Fragment) n=... [more]
A0A2P4WVH9_9STRA3.730e-1728.63Transcription initiation factor TFIID subunit (Fra... [more]
A0A6H5JET0_9PHAE8.290e-1786.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5D6XMW3_9STRA1.430e-1638.41TFIID_NTD2 domain-containing protein n=1 Tax=Pythi... [more]
I2CPL9_NANGC8.730e-1632.77Transcription initiation factor tfiid subunit (Fra... [more]
A0A6A5ANV2_9STRA3.100e-1532.96TFIID_NTD2 domain-containing protein n=4 Tax=Aphan... [more]
A0A6A4A244_9STRA3.760e-1528.16TFIID_NTD2 domain-containing protein n=4 Tax=Phyto... [more]
A0A067CL81_SAPPC7.250e-1534.76TFIID_NTD2 domain-containing protein n=2 Tax=Sapro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 38..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..321
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 848..883
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..394
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 593..615
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 437..466
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..394
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 543..576
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 786..821
score: 13.501034
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 613..646
score: 14.212849
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 702..739
score: 13.764669
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 660..695
score: 9.651964
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 744..781
score: 13.817396
NoneNo IPR availableCDDcd00200WD40coord: 613..821
e-value: 1.02873E-68
score: 228.373
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 763..777
score: 40.06
coord: 805..819
score: 42.07
coord: 721..735
score: 39.23
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 505..544
e-value: 17.0
score: 9.3
coord: 779..818
e-value: 7.9E-9
score: 45.3
coord: 737..776
e-value: 5.9E-12
score: 55.7
coord: 653..692
e-value: 5.3E-6
score: 36.0
coord: 606..645
e-value: 1.2E-8
score: 44.8
coord: 695..734
e-value: 5.8E-11
score: 52.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 660..692
e-value: 7.7E-4
score: 20.2
coord: 697..734
e-value: 1.3E-9
score: 38.5
coord: 613..645
e-value: 1.0E-7
score: 32.5
coord: 783..818
e-value: 5.4E-7
score: 30.2
coord: 738..776
e-value: 2.4E-9
score: 37.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 702..743
score: 17.827036
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 744..785
score: 17.793619
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 786..821
score: 16.423473
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 660..701
score: 12.446706
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 613..654
score: 17.927292
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 507..700
e-value: 1.4E-27
score: 98.5
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 701..907
e-value: 2.9E-49
score: 169.9
IPR037264TFIID subunit TAF5, NTD2 domain superfamilyGENE3D1.25.40.500TFIID subunit TAF5, NTD2 domaincoord: 83..244
e-value: 2.4E-29
score: 104.3
IPR037264TFIID subunit TAF5, NTD2 domain superfamilySUPERFAMILY160897Taf5 N-terminal domain-likecoord: 86..243
IPR007582TFIID subunit TAF5, NTD2 domainPFAMPF04494TFIID_NTD2coord: 96..239
e-value: 5.8E-24
score: 84.9
IPR007582TFIID subunit TAF5, NTD2 domainCDDcd08044TAF5_NTD2coord: 98..246
e-value: 1.21929E-25
score: 101.116
IPR037783Transcription initiation factor TFIID subunit 5PANTHERPTHR19879TRANSCRIPTION INITIATION FACTOR TFIIDcoord: 15..909
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 805..819
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 763..777
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 721..735
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 632..646
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 505..907

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1105contigP-littoralis_Contig1105:41943..62978 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1105.5.3mRNA_P-littoralis_Contig1105.5.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig1105 41943..64703 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1105.5.3 ID=prot_P-littoralis_Contig1105.5.3|Name=mRNA_P-littoralis_Contig1105.5.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=914bp
MSSFRSNHLPDAPDLHQDILVKYLQTLGVTPETTKAIRDEVREDHEEEKE
EQEKGEQQQGTGGGEDVRAFARRQGMEGAGGIRNGNNVMAWGILEGNPEK
VEQAYRGLTEFVGSSWELYRPELEAVIFPVFVHCYLTLVMFDHRPERGSA
GGEKEGAEWRGTAKSLMRAWGGEHEARYKDEMTLLRMVTTKEHAEASGYC
QLVLTHKFRVKMCLATSKLLNAFLVNMGLLLVMHILNTRVKFILEERSPL
PFAQIIRCGPDDAFPAALRRATSADDGDASAATDAAQKGGEETGGGGGGG
GREKDLKWAAPPPMEVALLKQTERNAVASGLYYPLSLEPKAATNSSADTA
AAAAGATPAAAAAGGPATPTATAPTGLPATNGTTTASPNSAGGLTVNTGA
EGAAAAGAAGAAAIPTGSAAAAAARARASRVAAASEVTEATARRHGGLRQ
KEVSLPLKPPPQPDLAGNWPYLRLTLRPLDSSQLKDTLSTPEGGARPFVA
NPLSPHVLMITFYNALDTMCCLKPTRDGMQVAAGFSDRMVRAWRTAPNAP
HPPAADGTTMPSVSPPSSNGPSKAGGAAGAAAAAAAAGKAPGGGGGGGGG
GEEGPGLDDPVRLVGHSEPVHSVSWSPDGRFLLSAGGDGGVRLWDIARGR
AGSSAGYVRYDGHCGPVWDVAFGPAGYYFATASEDRSACLWSTDSASPLR
IFAGHIMGVVCVTFHPNANYVVTGSRDKTVRVWDVQNGNCVRLLAGHMGA
VMCVAVSPNGRQVAAGSSDKTIRVWDVSTGKALALFKGHKEIVESVDFSA
ESSALVSGSRDNTVKIWDVASACNRQGDGRNSIDSSASLAEQMEAAAGRG
AGGVAGRKRKKGKDGGGAAWSSRGDGPSHDPVHSFATRNTGVFNVLFTKR
NLIIASGVCRSKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037264TFIID_NTD2_sf
IPR007582TFIID_NTD2
IPR037783Taf5
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf