mRNA_P-littoralis_Contig1104.2.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1104.2.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 317 bits (812), Expect = 1.340e-103 Identity = 154/192 (80.21%), Postives = 160/192 (83.33%), Query Frame = 3
Query: 186 GTVREAGVPGRNGFH*CYPYSVG*VPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGM 761
G + G PG G PYNQ RSYTGKEGKPT+GYQVTVNHAGRVLAVTEGFTGSTNDKTIIC D AVDRIR DKQY EK F V+ KDGTT TLKGCYLIVDNGYHKWR LIEPSKYPLS DLLFSKRLESVRKDVECFFGILK+RFRILKLAMTYQ+QER+DYVFFTCCILHNMLHT DGM
Sbjct: 190 GQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGM 381
BLAST of mRNA_P-littoralis_Contig1104.2.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 308 bits (788), Expect = 3.070e-102 Identity = 144/168 (85.71%), Postives = 154/168 (91.67%), Query Frame = 3
Query: 261 PYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMD 764
PYNQARSYTGKEG PTIGYQVTV+HAGR +AVTEGFTGSTNDKT +CWDAAV++IR DKQYTEKTFDVYN+DGTT TLKGCY++VDNGYHKW+ LIEPSKYPLS DLLFSKRLESVRKDVECFFGILK R RIL LAM +Q QERID VFFTCCILHNMLHTFDGMD
Sbjct: 46 PYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMD 213
BLAST of mRNA_P-littoralis_Contig1104.2.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 304 bits (778), Expect = 3.440e-100 Identity = 143/168 (85.12%), Postives = 152/168 (90.48%), Query Frame = 3
Query: 261 PYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMD 764
PYNQARSYTGK+ PTI YQVTV+HA R +AVTEGFTGSTNDKTI+CWDAAVD+IR DKQYTEKTFD+YN+DGTT TLKGCY + DNGYHKW+ LIEPSKYPLS DLLFSKRLESVRKDVECFFGILK RFRILKLAM YQ QERID VFFTCCILHNMLHTFDGMD
Sbjct: 91 PYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMD 258
BLAST of mRNA_P-littoralis_Contig1104.2.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 299 bits (765), Expect = 2.310e-97 Identity = 138/168 (82.14%), Postives = 150/168 (89.29%), Query Frame = 3
Query: 261 PYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMD 764
PYN ARSYTGKEG PT+GYQVTVNHAGR +AVTEGFT STNDKT +CWDA V++IR D QYTEKTFDVYN+DGTT TLKGCYL+VDNGYHKW+ L+EP+KYPLS D+LFSKRLESVRKDVECFFGILK FRI K+AM Y EQERID VFFTCCILHNMLHTFDGMD
Sbjct: 186 PYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMD 353
BLAST of mRNA_P-littoralis_Contig1104.2.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 288 bits (738), Expect = 1.180e-92 Identity = 144/196 (73.47%), Postives = 152/196 (77.55%), Query Frame = 3
Query: 261 PYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYT----------------------------EKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMD 764
PYNQARSYTGKEG PTI YQVTV+HAGR +AVTEGFTGSTNDKTI+CWD AV++I DK YT EKTFDVYN+DGTT TLKGCYL+VDNGYHKW+ LIEPSKYPLS DLLFSKRLESVRKDVECFFGILK RFRILKLAM YQ QERID VFFTC ILHNMLHTFDGMD
Sbjct: 173 PYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMD 368
BLAST of mRNA_P-littoralis_Contig1104.2.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 253 bits (646), Expect = 2.050e-81 Identity = 121/169 (71.60%), Postives = 137/169 (81.07%), Query Frame = 3
Query: 261 PYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDD 767
PYNQARSYTGKEG PT+ YQVTV+H RVLAVT GFTGSTNDK+II +D AV +IR+D Y+EK F VY DGT LKGCYL+VDNGYHKW TLI PSKYP+ DL FSKRLESVRKDVECFFGI+K FRILKL++ Y +QE ID VFFTCCILHNMLH++D +
Sbjct: 3 PYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSE 171
BLAST of mRNA_P-littoralis_Contig1104.2.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 256 bits (655), Expect = 1.210e-79 Identity = 126/188 (67.02%), Postives = 142/188 (75.53%), Query Frame = 3
Query: 204 GVPGRNGFH*CYPYSVG*VPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDD 767
G G G G PYNQARSYTGKEG PT+ YQVTV+H RVLAVT GFTGSTNDK+II +D AV +IR+D Y+EK F VY DGT LKGCYL+VDNGYHKW TLI PSKYP+ DL FSKRLESVRKDVECFFGI+K RFRILKL++ Y +QE ID VFFTCCILHNMLH++D +
Sbjct: 225 GFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSE 412
BLAST of mRNA_P-littoralis_Contig1104.2.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 254 bits (648), Expect = 1.680e-79 Identity = 125/188 (66.49%), Postives = 143/188 (76.06%), Query Frame = 3
Query: 204 GVPGRNGFH*CYPYSVG*VPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDD 767
G PG G G PYNQAR YTGKEGKPT+ +QVTV+H+GRVLAVT GFTG+TNDKTII +D AV RIR D YTE+ + +Y +DG KGCYL+VDNGYHKWRTLI PSK P+ GDL+FSKRLES RKDVEC+FGILK RFRI KLA+ + +QE ID VFFTCCILHNMLH+FD D
Sbjct: 150 GFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGD 337
BLAST of mRNA_P-littoralis_Contig1104.2.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 254 bits (648), Expect = 2.000e-78 Identity = 125/188 (66.49%), Postives = 143/188 (76.06%), Query Frame = 3
Query: 204 GVPGRNGFH*CYPYSVG*VPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDD 767
G PG G G PYNQAR YTGKEGKPT+ +QVTV+H+GRVLAVT GFTG+TNDKTII +D AV RIR D YTE+ + +Y +DG KGCYL+VDNGYHKWRTLI PSK P+ GDL+FSKRLES RKDVEC+FGILK RFRI KLA+ + +QE ID VFFTCCILHNMLH+FD D
Sbjct: 241 GFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGD 428
BLAST of mRNA_P-littoralis_Contig1104.2.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE) HSP 1 Score: 236 bits (602), Expect = 1.600e-74 Identity = 111/168 (66.07%), Postives = 133/168 (79.17%), Query Frame = 3
Query: 261 PYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMD 764
P+ RS+TGKEG PTI Y+VTV+H GR LAVT GFTG+TNDKTII +D+ V+ IR + QYTE+ + + +GT RT +GC+LI+DN YH+W TLI PSKYP S D FS+ LESVRKDVECFFGILK RFRILKL M Y ++E ID +FFTCCILHNMLHTFDG+D
Sbjct: 3 PFTLGRSFTGKEGFPTIAYEVTVDHVGRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLD 170 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1104.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1104.2.1 >prot_P-littoralis_Contig1104.2.1 ID=prot_P-littoralis_Contig1104.2.1|Name=mRNA_P-littoralis_Contig1104.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=107bp MACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPback to top mRNA from alignment at P-littoralis_Contig1104:8357..9433+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1104.2.1 ID=mRNA_P-littoralis_Contig1104.2.1|Name=mRNA_P-littoralis_Contig1104.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1077bp|location=Sequence derived from alignment at P-littoralis_Contig1104:8357..9433+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1104:8357..9433+ >mRNA_P-littoralis_Contig1104.2.1 ID=mRNA_P-littoralis_Contig1104.2.1|Name=mRNA_P-littoralis_Contig1104.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=321bp|location=Sequence derived from alignment at P-littoralis_Contig1104:8357..9433+ (Pylaiella littoralis U1_48)back to top |