mRNA_P-littoralis_Contig1103.14.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1103.14.1
Unique NamemRNA_P-littoralis_Contig1103.14.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1103.14.1 vs. uniprot
Match: A0A651D4A8_HALSX (TAXI family TRAP transporter solute-binding subunit n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A651D4A8_HALSX)

HSP 1 Score: 629 bits (1621), Expect = 3.720e-227
Identity = 312/329 (94.83%), Postives = 326/329 (99.09%), Query Frame = 1
Query:    1 MRNMMPKSFALLAGGALIAAAAHAEVDREGWPSSFTMGTASQGGTFYIYGSGWANLIADQLGDISGGGEVTGGPTQNLALVHNGDTAFGMTTMGPAADAMKGESPLAPGVVMDNACAMFPMYETPFSVTALSSSGITSISEIPDGSRIGFGPAGSTSDVYFPAILEELGVNFERRNGGWTDLGGQLQDGLLDVVAFAAGVPIPAVSQLEVQTDVNIIEFSEEEQAQIIDAFPVSEYMIPASTYETLEEDARAVSMWNFAIAACDLPESFVYEATRITMENNDRMMSVHRSAETTIPENIVYNTVMPFHPGAARWFNENGYEIADDMIRQ 987
            MRNMMPKSFALLAGGALIAAAAHA+VDR+GWPSSFT+GTASQGGTFYIYGSGWANLIADQLGDISGGGEVTGGPTQNLALVHNGD AFGMTTMGPAADAM GESPLAPGVVMDNACAMFPMYETPFSVTAL++SGITSIS+IPDGSRIGFGP+GSTSDVYFPAILEELGV+FERRNGGW+DLGGQLQDGLLDV+AFAAG+PIPAVSQLEVQTDVNIIEF+EEEQAQIIDAFPVS++MIPASTYETLEEDARAVSMWNFAIAACDLPESFVYEATRITMENNDRMMSVHRSAETTIPENIVYNTVMPFHPGAARWFNENGYEI DDMIRQ
Sbjct:    1 MRNMMPKSFALLAGGALIAAAAHADVDRDGWPSSFTIGTASQGGTFYIYGSGWANLIADQLGDISGGGEVTGGPTQNLALVHNGDLAFGMTTMGPAADAMNGESPLAPGVVMDNACAMFPMYETPFSVTALANSGITSISDIPDGSRIGFGPSGSTSDVYFPAILEELGVDFERRNGGWSDLGGQLQDGLLDVIAFAAGIPIPAVSQLEVQTDVNIIEFTEEEQAQIIDAFPVSDFMIPASTYETLEEDARAVSMWNFAIAACDLPESFVYEATRITMENNDRMMSVHRSAETTIPENIVYNTVMPFHPGAARWFNENGYEIEDDMIRQ 329          
BLAST of mRNA_P-littoralis_Contig1103.14.1 vs. uniprot
Match: A0A1U9REM6_9GAMM (C4-dicarboxylate ABC transporter substrate-binding protein n=13 Tax=root TaxID=1 RepID=A0A1U9REM6_9GAMM)

HSP 1 Score: 583 bits (1504), Expect = 2.610e-209
Identity = 286/330 (86.67%), Postives = 314/330 (95.15%), Query Frame = 1
Query:    1 MRNMMPKSFALLAGGALIAAA-AHAEVDREGWPSSFTMGTASQGGTFYIYGSGWANLIADQLGDISGGGEVTGGPTQNLALVHNGDTAFGMTTMGPAADAMKGESPLAPGVVMDNACAMFPMYETPFSVTALSSSGITSISEIPDGSRIGFGPAGSTSDVYFPAILEELGVNFERRNGGWTDLGGQLQDGLLDVVAFAAGVPIPAVSQLEVQTDVNIIEFSEEEQAQIIDAFPVSEYMIPASTYETLEEDARAVSMWNFAIAACDLPESFVYEATRITMENNDRMMSVHRSAETTIPENIVYNTVMPFHPGAARWFNENGYEIADDMIRQ 987
            MRN MPK+ AL+AGGAL+AAA AHAEVDR+GWPSSFT+GTASQGGTFYIYGSGWANLIADQLG I+GGGEVTGGPTQNLALVH G+ AFG+TT+GPA DAM G SPLAPGVVMDNACA+FPMYETPFS++AL+S GITSI++IPDGSRIGFGPAGSTSDVYFPAILEELGVNFERRNGGW+DLGGQLQDGLLDV+AFAAGVPIPAVSQLEVQT++NIIEF+EEEQA++I+AFPVSE+ IPASTYETLEEDARAVSMWNFAIA CDLPES VYE TR+TMENNDRM+S+HRSAE +IPENI YNTVMPFHPGAARWFNENGYEIADDMIRQ
Sbjct:    1 MRNKMPKTLALIAGGALVAAATAHAEVDRDGWPSSFTVGTASQGGTFYIYGSGWANLIADQLGGITGGGEVTGGPTQNLALVHAGELAFGLTTLGPADDAMNGRSPLAPGVVMDNACALFPMYETPFSISALASKGITSIADIPDGSRIGFGPAGSTSDVYFPAILEELGVNFERRNGGWSDLGGQLQDGLLDVIAFAAGVPIPAVSQLEVQTNINIIEFTEEEQARVIEAFPVSEFTIPASTYETLEEDARAVSMWNFAIAGCDLPESLVYEVTRLTMENNDRMISIHRSAEESIPENIAYNTVMPFHPGAARWFNENGYEIADDMIRQ 330          
BLAST of mRNA_P-littoralis_Contig1103.14.1 vs. uniprot
Match: A0A6M4FTV0_9GAMM (TAXI family TRAP transporter solute-binding subunit n=2 Tax=Halomonas TaxID=2745 RepID=A0A6M4FTV0_9GAMM)

HSP 1 Score: 571 bits (1472), Expect = 2.830e-204
Identity = 277/315 (87.94%), Postives = 301/315 (95.56%), Query Frame = 1
Query:   40 GGALIAAAAHAEVDREGWPSSFTMGTASQGGTFYIYGSGWANLIADQLGDISGGGEVTGGPTQNLALVHNGDTAFGMTTMGPAADAMKGESPLAPGVVMDNACAMFPMYETPFSVTALSSSGITSISEIPDGSRIGFGPAGSTSDVYFPAILEELGVNFERRNGGWTDLGGQLQDGLLDVVAFAAGVPIPAVSQLEVQTDVNIIEFSEEEQAQIIDAFPVSEYMIPASTYETLEEDARAVSMWNFAIAACDLPESFVYEATRITMENNDRMMSVHRSAETTIPENIVYNTVMPFHPGAARWFNENGYEIADDMIR 984
            GG L+A  A AE DR GWPS+FT+GTASQGGTFYIYGSGWANLIAD+LG+ISGGGEVTGGPTQNLALVHNGD AFGMTTMGPAADAMKGESPLAPGVVMDNACAMFPMYETPFSVTAL++SGI SISEIPDG+RIGFGPAGSTSDVYFPAILEELGVNF+RRNGGW+DLGGQLQDGLLDV+AFAAGVPIPAVSQLEV+T+VNI+EF+EEEQAQII+AFPVSEYMIPA+TYETL+EDARAVSMWNFA A CDLPE F+YE TRITMENNDRM S+HRSAET+IPEN+ YNTVMPFHPGAARWFNENGYEI++DMIR
Sbjct:   26 GGLLVATGASAESDRSGWPSNFTIGTASQGGTFYIYGSGWANLIADELGNISGGGEVTGGPTQNLALVHNGDLAFGMTTMGPAADAMKGESPLAPGVVMDNACAMFPMYETPFSVTALANSGIASISEIPDGARIGFGPAGSTSDVYFPAILEELGVNFQRRNGGWSDLGGQLQDGLLDVIAFAAGVPIPAVSQLEVETNVNILEFTEEEQAQIIEAFPVSEYMIPAATYETLQEDARAVSMWNFAFARCDLPEDFIYEVTRITMENNDRMRSIHRSAETSIPENVTYNTVMPFHPGAARWFNENGYEISEDMIR 340          
BLAST of mRNA_P-littoralis_Contig1103.14.1 vs. uniprot
Match: A0A1P8R8T8_9GAMM (C4-dicarboxylate ABC transporter substrate-binding protein n=8 Tax=Halomonas TaxID=2745 RepID=A0A1P8R8T8_9GAMM)

HSP 1 Score: 568 bits (1463), Expect = 4.770e-203
Identity = 279/317 (88.01%), Postives = 300/317 (94.64%), Query Frame = 1
Query:   34 LAGGALIAAAAHAEVDREGWPSSFTMGTASQGGTFYIYGSGWANLIADQLGDISGGGEVTGGPTQNLALVHNGDTAFGMTTMGPAADAMKGESPLAPGVVMDNACAMFPMYETPFSVTALSSSGITSISEIPDGSRIGFGPAGSTSDVYFPAILEELGVNFERRNGGWTDLGGQLQDGLLDVVAFAAGVPIPAVSQLEVQTDVNIIEFSEEEQAQIIDAFPVSEYMIPASTYETLEEDARAVSMWNFAIAACDLPESFVYEATRITMENNDRMMSVHRSAETTIPENIVYNTVMPFHPGAARWFNENGYEIADDMIR 984
            L GG L++A+A A  DREGWPSSFTMGTASQGGT+YIYGSGWANLIAD+LGDISGGGEVTGGPTQNLALVHNGD +FGM TMGPAADAM GESPLAPGVVMDNACA+FPMYETPFS+TALS+SGITSISEIPDG+RIGFGP+GSTSD YFPAILEELG+NFERRNGGWTDLGGQLQDGLLDV+AFAAG+PIPAVSQLEVQT+VNIIEF+EEEQ   I+AFPVSE+MIPA TYETLEEDARAVSMWNFAIA CDLPE FVYE TRITMENND+MMSVHRSAETTIPEN+V+NTVMPFHPGAARWFNENGYEI DDMIR
Sbjct:   17 LIGGLLVSASAQA--DREGWPSSFTMGTASQGGTYYIYGSGWANLIADELGDISGGGEVTGGPTQNLALVHNGDISFGMATMGPAADAMNGESPLAPGVVMDNACAIFPMYETPFSITALSNSGITSISEIPDGARIGFGPSGSTSDTYFPAILEELGINFERRNGGWTDLGGQLQDGLLDVIAFAAGIPIPAVSQLEVQTNVNIIEFTEEEQQAAIEAFPVSEFMIPADTYETLEEDARAVSMWNFAIARCDLPEDFVYEVTRITMENNDKMMSVHRSAETTIPENVVHNTVMPFHPGAARWFNENGYEIDDDMIR 331          
BLAST of mRNA_P-littoralis_Contig1103.14.1 vs. uniprot
Match: A0A847BGX4_9GAMM (TAXI family TRAP transporter solute-binding subunit n=1 Tax=Halomonadaceae bacterium TaxID=2026746 RepID=A0A847BGX4_9GAMM)

HSP 1 Score: 558 bits (1439), Expect = 1.930e-199
Identity = 274/328 (83.54%), Postives = 301/328 (91.77%), Query Frame = 1
Query:    1 MRNMMPKSFALLAGGALIAAAAHAEVDREGWPSSFTMGTASQGGTFYIYGSGWANLIADQLGDISGGGEVTGGPTQNLALVHNGDTAFGMTTMGPAADAMKGESPLAPGVVMDNACAMFPMYETPFSVTALSSSGITSISEIPDGSRIGFGPAGSTSDVYFPAILEELGVNFERRNGGWTDLGGQLQDGLLDVVAFAAGVPIPAVSQLEVQTDVNIIEFSEEEQAQIIDAFPVSEYMIPASTYETLEEDARAVSMWNFAIAACDLPESFVYEATRITMENNDRMMSVHRSAETTIPENIVYNTVMPFHPGAARWFNENGYEIADDMIR 984
            MRN+  K+      GAL+ AA+ A  DREGWPS+FTMGTASQGGTF+IYGSGWANLIAD+LGDISGGGEVTGGP QNLALVH+GD AFGMTTMGPAADAM GESPLAPG+VMDNACAMFPMYETPFSVT L+SSGITSISEIPDG+RIGFGPAGSTSD YFP ILE LGVNFERRNGGW+DLGGQLQDGLLDV+AFAAG+PIPAVSQLEV+T+VNIIEF+EEE+ Q+I  FPVSE+MIPASTYETL EDARAVSMWNFAIA CDLPE FVYE TRITMENND+M+ +HRSAET+IPEN+V+NTVMPFHPGAARWFNENGYEIA+DMIR
Sbjct:    1 MRNVTTKALTGTLAGALLIAASAAHADREGWPSNFTMGTASQGGTFFIYGSGWANLIADELGDISGGGEVTGGPVQNLALVHSGDLAFGMTTMGPAADAMNGESPLAPGMVMDNACAMFPMYETPFSVTTLASSGITSISEIPDGARIGFGPAGSTSDSYFPDILETLGVNFERRNGGWSDLGGQLQDGLLDVIAFAAGIPIPAVSQLEVETNVNIIEFTEEERDQVIAEFPVSEFMIPASTYETLTEDARAVSMWNFAIARCDLPEDFVYEVTRITMENNDKMVGIHRSAETSIPENVVHNTVMPFHPGAARWFNENGYEIAEDMIR 328          
BLAST of mRNA_P-littoralis_Contig1103.14.1 vs. uniprot
Match: A0A1G9UIM6_9GAMM (Uncharacterized protein n=4 Tax=Halomonas TaxID=2745 RepID=A0A1G9UIM6_9GAMM)

HSP 1 Score: 551 bits (1419), Expect = 2.000e-196
Identity = 271/324 (83.64%), Postives = 293/324 (90.43%), Query Frame = 1
Query:   19 KSFALL---AGGALIAAAAHAEVDREGWPSSFTMGTASQGGTFYIYGSGWANLIADQLGDISGGGEVTGGPTQNLALVHNGDTAFGMTTMGPAADAMKGESPLAPGVVMDNACAMFPMYETPFSVTALSSSGITSISEIPDGSRIGFGPAGSTSDVYFPAILEELGVNFERRNGGWTDLGGQLQDGLLDVVAFAAGVPIPAVSQLEVQTDVNIIEFSEEEQAQIIDAFPVSEYMIPASTYETLEEDARAVSMWNFAIAACDLPESFVYEATRITMENNDRMMSVHRSAETTIPENIVYNTVMPFHPGAARWFNENGYEIADDMI 981
            K FALL   A   ++A A  A  DR+GWPSSFTMGTASQGGT+YIYGSGWANLIAD+LGDISGGGEVTGGPTQNLALVHNGD +FGM TMGPA DA+ GESPLAPGV MDN CA+FPMYETPFS+TALS +GIT+ISEIPDG+RIGFGP+GSTSD YFPAILEELG++FERRNGGWTDLGGQLQDGLLDV+AFAAG+PIPAVSQLEVQTDVNIIEF+EEEQ   IDAFPVSE+MIPA TYETLEEDARAVSMWNFAIA CDLPE FVYE TRITMENND+MM VHRSA TTIPEN+V+N VMPFHPGAARWFNENGYEI DDMI
Sbjct:    2 KRFALLPLAAATVMMATATQAVADRDGWPSSFTMGTASQGGTYYIYGSGWANLIADELGDISGGGEVTGGPTQNLALVHNGDISFGMATMGPATDAVNGESPLAPGVPMDNVCAIFPMYETPFSITALSDTGITAISEIPDGARIGFGPSGSTSDTYFPAILEELGIDFERRNGGWTDLGGQLQDGLLDVIAFAAGIPIPAVSQLEVQTDVNIIEFTEEEQQAAIDAFPVSEFMIPADTYETLEEDARAVSMWNFAIAGCDLPEDFVYEVTRITMENNDKMMDVHRSAATTIPENVVHNDVMPFHPGAARWFNENGYEIDDDMI 325          
BLAST of mRNA_P-littoralis_Contig1103.14.1 vs. uniprot
Match: S2KXQ7_HALAF (C4-dicarboxylate ABC transporter substrate-binding protein n=3 Tax=Halomonas TaxID=2745 RepID=S2KXQ7_HALAF)

HSP 1 Score: 541 bits (1394), Expect = 1.790e-192
Identity = 271/332 (81.63%), Postives = 297/332 (89.46%), Query Frame = 1
Query:    4 RNMMPKSFALL-----AGGALIAAAAHAEVDREGWPSSFTMGTASQGGTFYIYGSGWANLIADQLGDISGGGEVTGGPTQNLALVHNGDTAFGMTTMGPAADAMKGESPLAPGVVMDNACAMFPMYETPFSVTALSSSGITSISEIPDGSRIGFGPAGSTSDVYFPAILEELGVNFERRNGGWTDLGGQLQDGLLDVVAFAAGVPIPAVSQLEVQTDVNIIEFSEEEQAQIIDAFPVSEYMIPASTYETLEEDARAVSMWNFAIAACDLPESFVYEATRITMENNDRMMSVHRSAETTIPENIVYNTVMPFHPGAARWFNENGYEIADDMIR 984
            R+ +P+  ++L      GG L+A+AAHA  DR  WP SFTMGTASQGGT+++YGSGWANLIAD+LG +SGGGEVTGGPTQNLALVH+G+ AFGMTTMGPA DAM GESPLAPGVVMDN CAMFPMYETPFS+ ALSSSGITSISEIPDG+RIGFGPAGSTSD YFPAILEELGVNFERRNGGW DLGGQLQDGLLDV+AFAAG+PIPAVSQLEVQTDVNIIEF+EEEQ Q IDAFPVSE+ IPASTY TLE+DARAVSMWNFAIA CDLPE FVYEATRITMENNDRM  +HRSA TTIPEN+V+N V+PFHPGAARWFNENGYEI + MIR
Sbjct:    7 RSALPRVASVLISGACVGGLLMASAAHA--DRSEWPQSFTMGTASQGGTYFVYGSGWANLIADELG-LSGGGEVTGGPTQNLALVHSGEIAFGMTTMGPATDAMNGESPLAPGVVMDNVCAMFPMYETPFSIAALSSSGITSISEIPDGARIGFGPAGSTSDTYFPAILEELGVNFERRNGGWNDLGGQLQDGLLDVIAFAAGIPIPAVSQLEVQTDVNIIEFTEEEQQQAIDAFPVSEFSIPASTYTTLEDDARAVSMWNFAIAGCDLPEDFVYEATRITMENNDRMREIHRSAATTIPENVVHNKVIPFHPGAARWFNENGYEIDEAMIR 335          
BLAST of mRNA_P-littoralis_Contig1103.14.1 vs. uniprot
Match: A0A0D5M8X4_9GAMM (TRAP transporter solute receptor, TAXI family n=37 Tax=Halomonas TaxID=2745 RepID=A0A0D5M8X4_9GAMM)

HSP 1 Score: 536 bits (1382), Expect = 1.000e-190
Identity = 264/330 (80.00%), Postives = 295/330 (89.39%), Query Frame = 1
Query:    1 MRNMMPKSFALLAGGALIAAAA---HAEVDREGWPSSFTMGTASQGGTFYIYGSGWANLIADQLGDISGGGEVTGGPTQNLALVHNGDTAFGMTTMGPAADAMKGESPLAPGVVMDNACAMFPMYETPFSVTALSSSGITSISEIPDGSRIGFGPAGSTSDVYFPAILEELGVNFERRNGGWTDLGGQLQDGLLDVVAFAAGVPIPAVSQLEVQTDVNIIEFSEEEQAQIIDAFPVSEYMIPASTYETLEEDARAVSMWNFAIAACDLPESFVYEATRITMENNDRMMSVHRSAETTIPENIVYNTVMPFHPGAARWFNENGYEIADDMI 981
            MRN MPK+F LLA  AL+ AAA    A+ DR  WP +FT+GTASQGGT+++YGSGWAN IAD+LG +SGGGEVTGGPTQNLALVH GD AFG+TTMGPA+DA+KGESPLAPG+ MDN CAMFPMYETPFS+TALS SGI SIS+IPDG+RIGFGPA STSD YFPAILE LGV+FERRNGGW+DLGGQLQDGLLDVVAFAAG+PIPAVSQLEVQTDVNIIEF+EEE A +++ FPV+E+MIPA+TY TLEEDARAVSMWNFAIA CDLPE FVYE T+ TMENNDRM SVHRSAETTIPENI +NTV+PFHPGAARW+ ENGYEIADDMI
Sbjct:    1 MRNQMPKTFTLLASSALLVAAASSAQAQADRSDWPDNFTVGTASQGGTYFVYGSGWANFIADELG-VSGGGEVTGGPTQNLALVHTGDMAFGLTTMGPASDAVKGESPLAPGMKMDNVCAMFPMYETPFSITALSDSGIESISDIPDGARIGFGPAASTSDTYFPAILETLGVDFERRNGGWSDLGGQLQDGLLDVVAFAAGIPIPAVSQLEVQTDVNIIEFNEEELATVLENFPVAEFMIPANTYTTLEEDARAVSMWNFAIAGCDLPEDFVYEVTKATMENNDRMRSVHRSAETTIPENIKHNTVLPFHPGAARWYEENGYEIADDMI 329          
BLAST of mRNA_P-littoralis_Contig1103.14.1 vs. uniprot
Match: A0A368TU56_9GAMM (C4-dicarboxylate ABC transporter substrate-binding protein n=2 Tax=Halomonas TaxID=2745 RepID=A0A368TU56_9GAMM)

HSP 1 Score: 530 bits (1366), Expect = 2.450e-188
Identity = 257/328 (78.35%), Postives = 289/328 (88.11%), Query Frame = 1
Query:    1 MRNMMPKSFALLAGGALIAAAAHAEVDREGWPSSFTMGTASQGGTFYIYGSGWANLIADQLGDISGGGEVTGGPTQNLALVHNGDTAFGMTTMGPAADAMKGESPLAPGVVMDNACAMFPMYETPFSVTALSSSGITSISEIPDGSRIGFGPAGSTSDVYFPAILEELGVNFERRNGGWTDLGGQLQDGLLDVVAFAAGVPIPAVSQLEVQTDVNIIEFSEEEQAQIIDAFPVSEYMIPASTYETLEEDARAVSMWNFAIAACDLPESFVYEATRITMENNDRMMSVHRSAETTIPENIVYNTVMPFHPGAARWFNENGYEIADDMIR 984
            MRNMMPK+F LLAG AL+ A   A  +R  WP +FT+GTASQGGT+++YGSGWAN IAD+LG +SGGGEVTGGPTQNLALVH GD AFG+TTMGPAADA+ G+SPLAPG+ MDN CAMFPMYETPFS+TAL SSGI+SISEIPDG+RIGFGPA STSD YFP ILE LGV F+RRNGGWTDLGGQLQDGLLDV+AFAAG+PIPAVSQLEVQTDVNIIEF+EEEQ  +I+ FPV+E+ IPASTYETLEEDARAVSMWNFAIA CDLPE FVYE T++TMENND M SVHRSA TTIPENI YN V+PFHPGAARW+ ENGY+I  D+I+
Sbjct:    1 MRNMMPKTFTLLAGSALLVAGTAAHAERSDWPDNFTVGTASQGGTYFVYGSGWANFIADELG-VSGGGEVTGGPTQNLALVHGGDVAFGLTTMGPAADAVSGKSPLAPGLEMDNVCAMFPMYETPFSITALESSGISSISEIPDGARIGFGPAASTSDTYFPEILETLGVEFDRRNGGWTDLGGQLQDGLLDVIAFAAGIPIPAVSQLEVQTDVNIIEFTEEEQQTVIENFPVAEFSIPASTYETLEEDARAVSMWNFAIAGCDLPEDFVYEVTKVTMENNDSMRSVHRSAATTIPENIKYNKVLPFHPGAARWYEENGYDIDPDLIK 327          
BLAST of mRNA_P-littoralis_Contig1103.14.1 vs. uniprot
Match: H0IZC6_9GAMM (TRAP transporter solute receptor, TAXI family protein n=34 Tax=Halomonas TaxID=2745 RepID=H0IZC6_9GAMM)

HSP 1 Score: 527 bits (1357), Expect = 5.540e-187
Identity = 257/327 (78.59%), Postives = 293/327 (89.60%), Query Frame = 1
Query:    1 MRNMMPKSFALLAGGALIAAAAHAEVDREGWPSSFTMGTASQGGTFYIYGSGWANLIADQLGDISGGGEVTGGPTQNLALVHNGDTAFGMTTMGPAADAMKGESPLAPGVVMDNACAMFPMYETPFSVTALSSSGITSISEIPDGSRIGFGPAGSTSDVYFPAILEELGVNFERRNGGWTDLGGQLQDGLLDVVAFAAGVPIPAVSQLEVQTDVNIIEFSEEEQAQIIDAFPVSEYMIPASTYETLEEDARAVSMWNFAIAACDLPESFVYEATRITMENNDRMMSVHRSAETTIPENIVYNTVMPFHPGAARWFNENGYEIADDMI 981
            MRNMMPK+FALLA  AL+AA   A  DR  WP++FT+GTASQGGT+++YGSGWAN I+D+LG +SGGGEVTGGPTQNLALVH+GD AFG+TTMGPA+DA+ GESPLAPG+ MDN CA+FPMYETPFS+ ALSSSGI SIS+IP+G+RIGFGPA STSD YFPAILE LGV F+RRNGGW+DLGGQLQDGLLDV+AFAAG+PIPAVSQLEVQT+VNIIEF+EEE   ++ +FPV+E+ IPASTY TLEEDARAVSMWNFAIA CDLPE FVYE T+ TMENNDRM SVHRSAETTIPENIV+NTV+PFHPGAARW+ ENGYEI DDMI
Sbjct:    1 MRNMMPKTFALLASSALLAAGT-AHADRSDWPNNFTVGTASQGGTYFVYGSGWANFISDELG-VSGGGEVTGGPTQNLALVHSGDMAFGLTTMGPASDAVNGESPLAPGLQMDNVCALFPMYETPFSIAALSSSGIESISDIPNGARIGFGPAASTSDTYFPAILETLGVEFDRRNGGWSDLGGQLQDGLLDVIAFAAGIPIPAVSQLEVQTNVNIIEFTEEEMETVLGSFPVAEFTIPASTYTTLEEDARAVSMWNFAIAGCDLPEDFVYEVTKATMENNDRMRSVHRSAETTIPENIVHNTVLPFHPGAARWYEENGYEIEDDMI 325          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1103.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A651D4A8_HALSX3.720e-22794.83TAXI family TRAP transporter solute-binding subuni... [more]
A0A1U9REM6_9GAMM2.610e-20986.67C4-dicarboxylate ABC transporter substrate-binding... [more]
A0A6M4FTV0_9GAMM2.830e-20487.94TAXI family TRAP transporter solute-binding subuni... [more]
A0A1P8R8T8_9GAMM4.770e-20388.01C4-dicarboxylate ABC transporter substrate-binding... [more]
A0A847BGX4_9GAMM1.930e-19983.54TAXI family TRAP transporter solute-binding subuni... [more]
A0A1G9UIM6_9GAMM2.000e-19683.64Uncharacterized protein n=4 Tax=Halomonas TaxID=27... [more]
S2KXQ7_HALAF1.790e-19281.63C4-dicarboxylate ABC transporter substrate-binding... [more]
A0A0D5M8X4_9GAMM1.000e-19080.00TRAP transporter solute receptor, TAXI family n=37... [more]
A0A368TU56_9GAMM2.450e-18878.35C4-dicarboxylate ABC transporter substrate-binding... [more]
H0IZC6_9GAMM5.540e-18778.59TRAP transporter solute receptor, TAXI family prot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1103contigP-littoralis_Contig1103:61746..62735 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1121939.L861_06795
PFAMsNMT1_3
Model size990
Max annot lvl135619|Oceanospirillales
KEGG koko:K07080
Hectar predicted targeting categorysignal peptide
Exons1
Evalue2.93e-193
EggNOG OGsCOG2358@1|root,COG2358@2|Bacteria,1N3YB@1224|Proteobacteria,1RVT1@1236|Gammaproteobacteria,1XIW1@135619|Oceanospirillales
DescriptionC4-dicarboxylate ABC transporter substrate-binding protein
Cds size990
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789437.805999-CDS-P-littoralis_Contig1103:61745..627351680789437.805999-CDS-P-littoralis_Contig1103:61745..62735Pylaiella littoralis U1_48CDSP-littoralis_Contig1103 61746..62735 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1103.14.1prot_P-littoralis_Contig1103.14.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1103 61746..62735 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1103.14.1

>prot_P-littoralis_Contig1103.14.1 ID=prot_P-littoralis_Contig1103.14.1|Name=mRNA_P-littoralis_Contig1103.14.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=330bp
MRNMMPKSFALLAGGALIAAAAHAEVDREGWPSSFTMGTASQGGTFYIYG
SGWANLIADQLGDISGGGEVTGGPTQNLALVHNGDTAFGMTTMGPAADAM
KGESPLAPGVVMDNACAMFPMYETPFSVTALSSSGITSISEIPDGSRIGF
GPAGSTSDVYFPAILEELGVNFERRNGGWTDLGGQLQDGLLDVVAFAAGV
PIPAVSQLEVQTDVNIIEFSEEEQAQIIDAFPVSEYMIPASTYETLEEDA
RAVSMWNFAIAACDLPESFVYEATRITMENNDRMMSVHRSAETTIPENIV
YNTVMPFHPGAARWFNENGYEIADDMIRQ*
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mRNA from alignment at P-littoralis_Contig1103:61746..62735+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1103.14.1 ID=mRNA_P-littoralis_Contig1103.14.1|Name=mRNA_P-littoralis_Contig1103.14.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=990bp|location=Sequence derived from alignment at P-littoralis_Contig1103:61746..62735+ (Pylaiella littoralis U1_48)
ATGCGTAATATGATGCCTAAGTCCTTCGCCCTACTAGCAGGTGGTGCTCT GATCGCTGCCGCCGCTCACGCTGAAGTTGATCGTGAGGGCTGGCCCTCCA GTTTCACCATGGGCACTGCTAGCCAAGGCGGCACCTTCTATATCTACGGC TCTGGCTGGGCAAACCTAATTGCTGACCAGCTTGGTGACATCTCGGGCGG TGGTGAAGTCACCGGTGGTCCCACGCAGAACTTAGCGCTTGTCCACAACG GCGACACGGCATTCGGTATGACCACCATGGGCCCGGCAGCAGACGCAATG AAGGGCGAAAGCCCATTGGCTCCTGGTGTGGTGATGGATAATGCCTGCGC CATGTTCCCAATGTACGAAACACCCTTCTCAGTCACGGCACTTTCCAGCT CTGGCATTACCTCAATTTCTGAGATTCCTGATGGCTCACGCATCGGTTTC GGCCCTGCAGGCTCAACTTCTGATGTTTATTTCCCTGCCATTCTGGAAGA ACTAGGCGTTAACTTCGAGCGCCGCAATGGTGGTTGGACTGACCTCGGCG GCCAACTGCAGGACGGCCTGTTAGACGTTGTTGCCTTCGCCGCTGGCGTT CCGATCCCCGCTGTTAGTCAGTTGGAAGTACAGACTGACGTCAACATTAT TGAATTCAGTGAAGAAGAGCAGGCTCAAATTATCGATGCCTTCCCAGTAT CTGAATACATGATTCCGGCCAGCACTTACGAAACGCTGGAAGAAGATGCT CGTGCTGTATCCATGTGGAACTTCGCTATCGCTGCTTGCGATCTGCCGGA AAGCTTTGTCTATGAAGCAACCCGCATCACGATGGAAAACAACGATCGCA TGATGTCGGTACACCGTAGTGCCGAAACGACTATTCCTGAAAACATTGTT TACAACACTGTCATGCCGTTCCACCCAGGTGCTGCTCGCTGGTTCAACGA AAACGGTTATGAAATTGCCGACGATATGATTCGCCAGTAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1103:61746..62735+

>mRNA_P-littoralis_Contig1103.14.1 ID=mRNA_P-littoralis_Contig1103.14.1|Name=mRNA_P-littoralis_Contig1103.14.1|organism=Pylaiella littoralis U1_48|type=CDS|length=990bp|location=Sequence derived from alignment at P-littoralis_Contig1103:61746..62735+ (Pylaiella littoralis U1_48)
ATGCGTAATATGATGCCTAAGTCCTTCGCCCTACTAGCAGGTGGTGCTCT
GATCGCTGCCGCCGCTCACGCTGAAGTTGATCGTGAGGGCTGGCCCTCCA
GTTTCACCATGGGCACTGCTAGCCAAGGCGGCACCTTCTATATCTACGGC
TCTGGCTGGGCAAACCTAATTGCTGACCAGCTTGGTGACATCTCGGGCGG
TGGTGAAGTCACCGGTGGTCCCACGCAGAACTTAGCGCTTGTCCACAACG
GCGACACGGCATTCGGTATGACCACCATGGGCCCGGCAGCAGACGCAATG
AAGGGCGAAAGCCCATTGGCTCCTGGTGTGGTGATGGATAATGCCTGCGC
CATGTTCCCAATGTACGAAACACCCTTCTCAGTCACGGCACTTTCCAGCT
CTGGCATTACCTCAATTTCTGAGATTCCTGATGGCTCACGCATCGGTTTC
GGCCCTGCAGGCTCAACTTCTGATGTTTATTTCCCTGCCATTCTGGAAGA
ACTAGGCGTTAACTTCGAGCGCCGCAATGGTGGTTGGACTGACCTCGGCG
GCCAACTGCAGGACGGCCTGTTAGACGTTGTTGCCTTCGCCGCTGGCGTT
CCGATCCCCGCTGTTAGTCAGTTGGAAGTACAGACTGACGTCAACATTAT
TGAATTCAGTGAAGAAGAGCAGGCTCAAATTATCGATGCCTTCCCAGTAT
CTGAATACATGATTCCGGCCAGCACTTACGAAACGCTGGAAGAAGATGCT
CGTGCTGTATCCATGTGGAACTTCGCTATCGCTGCTTGCGATCTGCCGGA
AAGCTTTGTCTATGAAGCAACCCGCATCACGATGGAAAACAACGATCGCA
TGATGTCGGTACACCGTAGTGCCGAAACGACTATTCCTGAAAACATTGTT
TACAACACTGTCATGCCGTTCCACCCAGGTGCTGCTCGCTGGTTCAACGA
AAACGGTTATGAAATTGCCGACGATATGATTCGCCAGTAA
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