prot_P-littoralis_Contig1102.17.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1102.17.1
Unique Nameprot_P-littoralis_Contig1102.17.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length198
Homology
BLAST of mRNA_P-littoralis_Contig1102.17.1 vs. uniprot
Match: D8LMN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN4_ECTSI)

HSP 1 Score: 330 bits (847), Expect = 1.710e-113
Identity = 156/193 (80.83%), Postives = 173/193 (89.64%), Query Frame = 0
Query:    1 LRAYDVGDPVFFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLVANNLMAKKAIRNQWRSSAYLHHTMLAVSVETPMEKLDLMKAGVAAGMRRGRHHKRHGHGGMLPDTVDYQVKGLTDGNRLSVFVLCRQRENSANMGRRFGNSSLFLKLIVRECNRHGISYTLPAQPFTLG--GAGDPLDARETFLGGKAG 191
            LRAYDVGDPV+FVDDTGGEDWYIVTRINMLTTVFRRWDGQATL+ANN+MAKKAIRNQWRSS YLHHTM+AVSV+TPMEKLD MK+G+AAG+RRGRH  +HG GG+LPDTVD+Q+KGLTDGNRLSVFVLC+QRENSANMGRRFGNSSLF KL+ RECNRHGISYTLPAQP      G  +  + RE FLGG+ G
Sbjct:   10 LRAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKSGIAAGLRRGRHRHKHGLGGLLPDTVDFQIKGLTDGNRLSVFVLCQQRENSANMGRRFGNSSLFHKLLARECNRHGISYTLPAQPLVAQKVGEAEAFNVREAFLGGETG 202          
BLAST of mRNA_P-littoralis_Contig1102.17.1 vs. uniprot
Match: A0A6H5JSR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR3_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 4.270e-103
Identity = 155/192 (80.73%), Postives = 172/192 (89.58%), Query Frame = 0
Query:    2 RAYDVGDPVFFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLVANNLMAKKAIRNQWRSSAYLHHTMLAVSVETPMEKLDLMKAGVAAGMRRGRHHKRHGHGGMLPDTVDYQVKGLTDGNRLSVFVLCRQRENSANMGRRFGNSSLFLKLIVRECNRHGISYTLPAQPFTL--GGAGDPLDARETFLGGKAG 191
            +AYDVGDPV+FVDDTGGEDWYIVTRINMLTTVFRRWDGQATL+ANN+MAKKAIRNQWRSS YLHHTM+AVSV+TPMEKLD MK G+AAG+RRGRH  RHG GG+LPDTVDYQ+KGLTDGNRLSVFV+C+QRENSANMGRRFGNS+LF KL+ RECNRHGISYTLPAQP     GG  +  + RE FLGG+ G
Sbjct:  837 KAYDVGDPVYFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLIANNIMAKKAIRNQWRSSRYLHHTMIAVSVDTPMEKLDQMKNGIAAGLRRGRHCHRHGLGGLLPDTVDYQIKGLTDGNRLSVFVVCQQRENSANMGRRFGNSNLFHKLLARECNRHGISYTLPAQPLVAQKGGEAEAFNIREAFLGGETG 1028          
BLAST of mRNA_P-littoralis_Contig1102.17.1 vs. uniprot
Match: A0A835YNU8_9STRA (Mechanosensitive ion channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNU8_9STRA)

HSP 1 Score: 100 bits (248), Expect = 6.330e-21
Identity = 62/174 (35.63%), Postives = 89/174 (51.15%), Query Frame = 0
Query:    2 RAYDVGDPVFFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLVANNLMAKKAIRNQWRSSAYLHHTMLAVSVETPMEKLDLMKAGVAAGMRRGRHHKRHGHGGML---PDTVDYQVKGLTDGNRLSVFVLCRQRENSANMGRRFGNSSLFLKLIVRECNRHGISYTLPAQPFTL 172
            RAYDVGD V+  D+   E  Y+V RINMLTTVFRRWD   T++ N  +AK+ IRN  RS   +    L VS+ TP  KL+ +K        R + + R   G +    P++VDY  + +     + VF +  Q+ +  +   +  N  L    +   C+  G+ Y LP Q  TL
Sbjct:  966 RAYDVGDRVYIKDELNDEANYVVQRINMLTTVFRRWDDHYTILPNQQLAKREIRNMRRSGDGVMLMTLLVSIATPRAKLEALK-------ERMQEYARAVTGPLYSCDPNSVDYCCRRVISCTNMEVFFVYSQKGSWQDNYLKVKNFHLMSLRLAEVCHELGLEYALPTQGVTL 1132          
BLAST of mRNA_P-littoralis_Contig1102.17.1 vs. uniprot
Match: A0A6H5JBC1_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC1_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 7.350e-16
Identity = 55/175 (31.43%), Postives = 90/175 (51.43%), Query Frame = 0
Query:    2 RAYDVGDPVFFVDD--TGGEDWY--IVTRINMLTTVFRRWDGQATLVANNLMAKKAIRNQWRSSAYLHHTMLAVSVETPMEKLDLMKAGVAAGMRRGRHHKRHGHGGMLPDTVDYQVKGLTDGNRLSVFVLCRQRENSANMGRRFGNSSLFLKLIVRECNRHGISYTLPAQPFTL 172
            R YDVGD V   DD  T G +    +VT++++ TT FRRWD Q   + N+L+A+K I N  R++   H   + V+  T   KL+ +   +    +     K+    G+ P  + + + G+ D  RLS+ ++ RQR N  +M +++   S+    I   C+  GI+Y LP  P  +
Sbjct:  993 RLYDVGDRVHIYDDVQTAGVEPMNVVVTKVDLRTTSFRRWDEQIFYIPNHLLAEKTIVNIQRTAHQWHEFYIHVAATTSSRKLETLHNALQQFAK-----KKDKPEGLYP-RMGFSLTGIEDSTRLSIRIVFRQRGNWQSMEKKWACQSMCTWAIKNACDTIGITYYLPEVPVVM 1161          
BLAST of mRNA_P-littoralis_Contig1102.17.1 vs. uniprot
Match: D7FX37_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX37_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 3.350e-13
Identity = 54/175 (30.86%), Postives = 87/175 (49.71%), Query Frame = 0
Query:    2 RAYDVGDPVFFVD--DTGGEDWYIVT--RINMLTTVFRRWDGQATLVANNLMAKKAIRNQWRSSAYLHHTMLAVSVETPMEKLDLMKAGVAAGMRRGRHHKRHGHGGMLPDTVDYQVKGLTDGNRLSVFVLCRQRENSANMGRRFGNSSLFLKLIVRECNRHGISYTLPAQPFTL 172
            R YDVGD V      +T GE+   VT  +++++TTVF+RWD Q   + N+L+A K I N  R++   H  M+ V+  T  EKL  ++  +    +     K  G    L   + + +  + D  +L++ +  RQR N  NM +++   S+    I   C+   ISY LP  P  +
Sbjct:  960 RLYDVGDRVHIYSGSNTQGEEPTNVTVVKVDLMTTVFKRWDEQVFYMPNHLLATKTIVNIQRTAHQWHEFMIQVAATTTPEKLTALQTSLQEFSKS--KDKPEG----LYTRMGFSLVRIEDSTKLTIRITFRQRGNWQNMEKKWACQSMCTWAIKSACDSLNISYFLPEVPVQM 1128          
BLAST of mRNA_P-littoralis_Contig1102.17.1 vs. uniprot
Match: A0A6A3B954_HIBSY (Mechanosensitive ion channel protein n=3 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3B954_HIBSY)

HSP 1 Score: 76.6 bits (187), Expect = 8.090e-13
Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = 0
Query:    1 LRAYDVGDPVFFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLVANNLMAKKAIRNQWRSSAYLHHTMLAVSVETPMEKLDLMKAGVAAGMRRGRHHKRHGHGGMLPDTVDYQVKGLTDGNRLSVFVLCRQRENSANMGRRFGNSSLFLKLIVRECNRHGISYTL 165
            +  +DVGD      +  G    IV  +N+LTTVF R+D Q  ++ N+++A KAI N +RS   L      + V+TP EK+ LMK  + + +     H          DT+   +K L   NR+ + +    R N  +MG RF   +L ++ +VR  N   I Y L
Sbjct:  715 MHPFDVGDRC----EIDGVQM-IVEEMNILTTVFLRYDNQRIIIPNSVLATKAINNYYRSPDMLEIVEFCIHVKTPAEKIGLMKQRILSYIEHRSDH-------WYQDTMII-LKELEVLNRVRIAIWVTHRMNHQDMGERFTRRALLIEELVRVFNELDIKYRL 866          
BLAST of mRNA_P-littoralis_Contig1102.17.1 vs. uniprot
Match: A0A5J5AF42_9ASTE (Mechanosensitive ion channel protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5AF42_9ASTE)

HSP 1 Score: 75.1 bits (183), Expect = 2.650e-12
Identity = 55/185 (29.73%), Postives = 85/185 (45.95%), Query Frame = 0
Query:    1 LRAYDVGDPVFFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLVANNLMAKKAIRNQWRSSAYLHHTMLAVSVETPMEKLDLMKAGVAAGMRRGRHHKRHGHGGMLPDTVDYQVKGLTDGNRLSVFVLCRQRENSANMGRRFGNSSLFLKLIVRECNRHGISYTLPAQPFTLGGAGDPLDARETF 185
            +  YDVGD      +  G    IV  +N+LTTVFRR+D Q  +  N+L+A K I N +RS         ++ + TP EK+ +MK  +   +     H   G       TV+  ++ L D NRL + V    R N  NMG R+    L ++ +++      I Y +   P  +     P+ +  TF
Sbjct:  554 MHPYDVGDRC----EVDGVQM-IVEEMNILTTVFRRYDNQIIMYPNSLLATKPISNYFRSPDMGESVDFSIHISTPTEKIVIMKKRIIQYIESRSDHWHQG------PTVN--IRDLEDMNRLKIVVWVTHRMNHQNMGERWARRGLLIEEMIKIFRGLDIEYRM--LPLDMNVRNMPVLSSNTF 723          
BLAST of mRNA_P-littoralis_Contig1102.17.1 vs. uniprot
Match: A0A6P4PGZ8_GOSAR (Mechanosensitive ion channel protein n=21 Tax=Gossypium TaxID=3633 RepID=A0A6P4PGZ8_GOSAR)

HSP 1 Score: 74.3 bits (181), Expect = 5.060e-12
Identity = 52/165 (31.52%), Postives = 81/165 (49.09%), Query Frame = 0
Query:    1 LRAYDVGDPVFFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLVANNLMAKKAIRNQWRSSAYLHHTMLAVSVETPMEKLDLMKAGVAAGMRRGRHHKRHGHGGMLPDTVDYQVKGLTDGNRLSVFVLCRQRENSANMGRRFGNSSLFLKLIVRECNRHGISYTL 165
            +  +DVGD      +  G    IV  +N+LTTVF R+D Q  ++ N+++A KAI N +RS   L      + V+TP EK+ LMK  + + +     H          DT+    K L + NR+ + +    R N  +MG RF   +L ++ +V+  N   I Y L
Sbjct:  718 MHPFDVGDRC----EIDGIQM-IVEEMNILTTVFLRYDNQKIIIPNSVLATKAIHNYYRSPDMLEIVEFCIHVKTPAEKIGLMKQRIMSYIEHKSDH-------WYQDTMII-FKELEELNRVRIAIWVTHRMNHQDMGERFIRRALLIEELVKIFNDLDIKYRL 869          
BLAST of mRNA_P-littoralis_Contig1102.17.1 vs. uniprot
Match: A0A835YTT2_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTT2_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.210e-11
Identity = 51/177 (28.81%), Postives = 83/177 (46.89%), Query Frame = 0
Query:    2 RAYDVGDPVFFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLVANNLMAKKAIRNQWRSSAYLHHTMLAVSVETPMEKLDLMKAGVAAGMRRG-RHHKRHGHGGMLPDTVDYQVKG-LTDGNRLSVFVLCRQRENSANMGRRFGNSSLFLKLIVRECNRHGISYTLPAQPFTLGGAG 176
            R +DVGD V F DD G ++ ++V RIN+L+TV +RWDGQ  +  N  +A + IRN  RS    +   + V  +   E L   +  + A  R   R H       ++PD++    +     G  L V V   Q ++  +   R+   +   ++ +       ++  LP QP  L G+G
Sbjct:  492 RPFDVGDGVHFRDDMGQDNVFVVHRINLLSTVLKRWDGQYVVWPNRFLALREIRNMRRSGPQSNTLTVFVRRDASAEALARYRDALRAAARAAPRDHA------LVPDSIGAAFRADAGGGTALEVCVSYTQVQSWQDANERWRTHAFLARVALTLRASLALAPDLPTQPVLLRGSG 662          
BLAST of mRNA_P-littoralis_Contig1102.17.1 vs. uniprot
Match: A0A426ZM92_ENSVE (Uncharacterized protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A426ZM92_ENSVE)

HSP 1 Score: 71.2 bits (173), Expect = 2.170e-11
Identity = 51/170 (30.00%), Postives = 82/170 (48.24%), Query Frame = 0
Query:    1 LRAYDVGD--PVFFVDDTGGE---DWYIVTRINMLTTVFRRWDGQATLVANNLMAKKAIRNQWRSSAYLHHTMLAVSVETPMEKLDLMKAGVAAGMRRGRHHKRHGHGGMLPDTVDYQVKGLTDGNRLSVFVLCRQRENSANMGRRFGNSSLFLKLIVRECNRHGISYTL 165
            +  +DVGD   V  V   GGE   ++ +V  +N+LTTVF R+D Q     N+++A K+I N +RS          V V TP+EKL LM+  +   M   + H         P  V   ++ + D NRL + +  R R N  +MG ++    L ++ +++      I Y +
Sbjct:   91 MHPFDVGDRCEVEGVQVLGGELDFNYMVVEEMNILTTVFLRYDNQKITYPNSVLATKSIGNFYRSPDMGDSIDFCVHVATPVEKLALMRERIIRFMENKKEHWYPN-----PSVV---LRDVDDMNRLRISIWMRHRINFQDMGEKWARRELVMQEMIKVLRELDIEYRM 252          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1102.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMN4_ECTSI1.710e-11380.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSR3_9PHAE4.270e-10380.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YNU8_9STRA6.330e-2135.63Mechanosensitive ion channel-domain-containing pro... [more]
A0A6H5JBC1_9PHAE7.350e-1631.43EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7FX37_ECTSI3.350e-1330.86Small Conductance Mechanosensitive Ion channel n=1... [more]
A0A6A3B954_HIBSY8.090e-1332.12Mechanosensitive ion channel protein n=3 Tax=Hibis... [more]
A0A5J5AF42_9ASTE2.650e-1229.73Mechanosensitive ion channel protein n=1 Tax=Nyssa... [more]
A0A6P4PGZ8_GOSAR5.060e-1231.52Mechanosensitive ion channel protein n=21 Tax=Goss... [more]
A0A835YTT2_9STRA1.210e-1128.81EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A426ZM92_ENSVE2.170e-1130.00Uncharacterized protein n=1 Tax=Ensete ventricosum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006685Mechanosensitive ion channel MscSPFAMPF00924MS_channelcoord: 4..132
e-value: 2.2E-6
score: 27.3
NoneNo IPR availablePANTHERPTHR31323:SF11CHROMOSOME 19, WHOLE GENOME SHOTGUN SEQUENCEcoord: 4..172
NoneNo IPR availablePANTHERPTHR31323MECHANOSENSITIVE ION CHANNEL PROTEIN MSY2coord: 4..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1102contigP-littoralis_Contig1102:57587..62208 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1102.17.1mRNA_P-littoralis_Contig1102.17.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1102 57587..62208 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1102.17.1 ID=prot_P-littoralis_Contig1102.17.1|Name=mRNA_P-littoralis_Contig1102.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=198bp
LRAYDVGDPVFFVDDTGGEDWYIVTRINMLTTVFRRWDGQATLVANNLMA
KKAIRNQWRSSAYLHHTMLAVSVETPMEKLDLMKAGVAAGMRRGRHHKRH
GHGGMLPDTVDYQVKGLTDGNRLSVFVLCRQRENSANMGRRFGNSSLFLK
LIVRECNRHGISYTLPAQPFTLGGAGDPLDARETFLGGKAGDGQGSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006685MscS_channel