prot_P-littoralis_Contig1.258.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1.258.4
Unique Nameprot_P-littoralis_Contig1.258.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length232
Homology
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BLAST of mRNA_P-littoralis_Contig1.258.4 vs. uniprot
Match: D7FT33_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT33_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 3.930e-17
Identity = 82/114 (71.93%), Postives = 92/114 (80.70%), Query Frame = 0 
Query:    1 MPKVNPDQSIGLVPTDGRRRAPGVVADRAAASKSASRNDAGRTKRXXXXXXXXXXXXXXXXXXXXXXXXGGV--ERGSHAPAETPLKAVSIRGMVGPRQGGLVVDTADAPQLSE 112
            MPKV+PDQSIGL+PTDGRRR PGVVADRAAASK+A++NDAGRT  XXXXXXXXXXXXXXXXXXXXXXXX     + G     ++   AVSIRGMVGPR GGL  +TA  P+LSE
Sbjct:  399 MPKVDPDQSIGLIPTDGRRRTPGVVADRAAASKNAAKNDAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEGQEGAGKS---AVSIRGMVGPRHGGLEAETA--PELSE 507
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.258.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FT33_ECTSI3.930e-1771.93Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..231
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:1182780..1185347 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.258.4mRNA_P-littoralis_Contig1.258.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig1 1181924..1185740 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1.258.4 ID=prot_P-littoralis_Contig1.258.4|Name=mRNA_P-littoralis_Contig1.258.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=232bp
MPKVNPDQSIGLVPTDGRRRAPGVVADRAAASKSASRNDAGRTKRRSGGT
PTLAALMMEEAQAAAAAKKGGVERGSHAPAETPLKAVSIRGMVGPRQGGL
VVDTADAPQLSEVVSSAKRATPGGSIAGNDNFATATSTSTSGAEKKPSEE
PSAGLPAPPLKTAGTASWNSSGRRTSKGAVVPPAPPSGNSIFVSGAEVEG
TGVVWPRGSEKDEEEEQEDAVAGWSRLDELD*
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