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Homology
BLAST of mRNA_P-littoralis_Contig110.81.1 vs. uniprot
Match: A0A6H5J7A0_9PHAE (DUF1713 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7A0_9PHAE) HSP 1 Score: 104 bits (259), Expect = 2.910e-23 Identity = 59/97 (60.82%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 13 GSYLPLKVSEVLQGLKQATTGLLQPSAFPASIPGPLLFAFPGVSQSASLPQSREHGEGMEEGAWEELR--DGLEGLFEGGLWATSVKRKRVTKMRKH 297
GS LP+KV E +QGLKQAT GLLQ A P ++ G F PGV + A LPQS EH +G EE EE D + GL EGG+WATSVKRKRVTKMRKH
Sbjct: 82 GSSLPIKVYEAVQGLKQATAGLLQHWASPLALSGAFPFVLPGVGRPALLPQSPEHDQGCEEDEDEEEEGVDLIGGLSEGGVWATSVKRKRVTKMRKH 178
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Model size | 950 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Ec32 ortholog description | Domain of unknown function DUF1713, mitochondria |
| Ec32 ortholog | Ec-05_002590.1 |
| Cds size | 354 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789435.0961514-CDS-P-littoralis_Contig110:387900..387952 | 1680789435.0961514-CDS-P-littoralis_Contig110:387900..387952 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig110 387901..387952 + |
| 1680789435.1069584-CDS-P-littoralis_Contig110:395400..395702 | 1680789435.1069584-CDS-P-littoralis_Contig110:395400..395702 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig110 395401..395702 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789435.1179326-UTR-P-littoralis_Contig110:395702..396298 | 1680789435.1179326-UTR-P-littoralis_Contig110:395702..396298 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig110 395703..396298 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig110.81.1 >prot_P-littoralis_Contig110.81.1 ID=prot_P-littoralis_Contig110.81.1|Name=mRNA_P-littoralis_Contig110.81.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=118bp
MGKHGSYLPLKVSEVLQGLKQATTGLLQPSAFPASIPGPLLFAFPGVSQS ASLPQSREHGEGMEEGAWEELRDGLEGLFEGGLWATSVKRKRVTKMRKHK WRKRRKAERQSASRRAN* back to topmRNA from alignment at P-littoralis_Contig110:387901..396298+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig110.81.1 ID=mRNA_P-littoralis_Contig110.81.1|Name=mRNA_P-littoralis_Contig110.81.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8398bp|location=Sequence derived from alignment at P-littoralis_Contig110:387901..396298+ (Pylaiella littoralis U1_48) ATGGGGAAGCATGGGTCATACTTGCCGCTGAAAGTTTCAGAGGTTTTGCA
AGGTGCGATATTCTCTAGGTAGTTATATCTGTCTGTCTGTCTGTCTGTCC
TGTCTCTGTGTCCCTCTGTCTTCCCTCTCAATACTACGAAGTACTTCTTT
TACAGCAGCAGCACTTCGAAGTATACCATGTTTCACCTCCACAACCGCTC
TCCTGCAACGCTAACGCCAACGCGAAGGCGTCGCTTACCCCATGGGAAGA
GCGGGTGTGTAGTGCCTGCAAGAGGGCGTCAGCAAGACCCTTTGCGTATG
CAATCAAGCGCCGCTGAGTACTTCCTGTCTTACAAGATACCACAGGAAAG
GTTCACTCACCGTGTATTTTTATTTGTTGGCAACTTTGCCCGAGCCAGAT
GTACTGCTGTACCGAACGGAGGATGTAATCCCTTCACGAAACAGGAGCGA
AAGAGGAAGTCACAGGGGGTATGTTTTGTGTATCCTGCGAGACCTCTTCC
CGAGAGGCTCACATTGCCGTACGACACACCATTTTTTATACGGCACGAGT
TTGTGCCGGCTCCCACCACGGTACTCCTGTGCCGATGGCGTTACCAGTTC
GCTGTGCTTCCATGCCTTGTGATGCAGGGACGGATACCTTTTACTGTTTT
ATTCTTACACATATGATGGGCTATGCCAGTAAGCGCGGATAAGCGTAGGT
TGGTCCAAGACATTCGCATCCAGTGCAGCCAGCGATGCCGGGTCATCGAA
GAAAGCTCGGCAGCGGGTAGTACTTTTCATTTTTCGCCGTTTGATTTGAG
AATAACTACCCTGTTGTACAAGCAAAATTTGAAATTAGCTGAACACCCAC
CGGTCGCCCCGGTGGTTCAGTTGGGAACTCACGAAACCTTCTGACATTCA
CGCGTGAGTTCGAATCCCAGTGCAGTAACACGATCTGGGTTCTCTTCTCA
CAATGCGCGTGCAAGTGGAAAGCGATTAATTGGTGAGTAATCAAAATCCG
ATCTTACCATCGACGAGGGAAGGGGATCGCTGTCCCCTTTCTCGCGATAA
AAACTCAACCGAAACAAGGCAAGCACCGCAGAGGGAAGTGGAGAAAAAAA
AAAACTCATGTGTTGACTTCCCCGTGCTGTGTGACCCCAGTTGGAGCGTC
GACCTACCCGAAAGGTGTAGAGTGGCGTCCAATTAAAGGGATGGCAACAC
ACCCACCCACCGTCAGAGTATTATATGATACGGTGATGACATCCCCACAC
TGCGGTCCCTTCATCAGCGCCAACAGCATCCAAGTCGCCGGGCGCCAGCT
CCCCGTCCATCTCCCCCTCTTCGTAGAACCCGTCCCAACAAATCAAGAGG
AAAAAATGTAATTTAAAACGTTCCTTTTGGGGACTCGATGCCCCAAGGTC
GTTGCTGAGTAATCAGCTATGATGCAGTAAAGCAGTCCGGAGTACCGTGT
ACAGTACGCGACACATGTTAAGAAACTCATAGATAAGAAATCCAGCCTGA
GATTTTTTTTTAATTTACTGTACTGTAAGCATTTACAGGTAAACATTTGT
GCTCAGTCTAGTTATCCTACACTAAAACCTTTAGTGGCAGTTGGGTTACG
CCCACAGAAGAAATACGCCGCGAGCCTCAGCCAAAATAGGAGTTCCTTAA
CATCCCCACACTCCGGTACTTGTACTCTGTACCCCCCCCTCCCCCCCCTC
CCCCCCCGCCCAAAAGAGATGGGAGTTTTTGACGTATGGAGCTCCGCAGA
ACTCCTCTTTCGTGACATTACAGTACTGTACTTGAAAAACCATATATCAG
GCTTTCGCGGACGTCGGTAACGTGACACTTGTCATTTTTACTTGAAAACT
CTTTGTGAAGAAAGATAGAGGCGCTTCGAAGGGGTGGAAAGGGGGACAAA
ATCATGTCACGCGACCGACAGCATAACAGCAGGGTGGTCGCAAACTCAAA
CAGCATAGCTCACACTGCACGATGCAGTTACTCGTGTACGTCCGGCACAC
GCAGCCTCCTCAGGCCCTGTGTTAACGAAAGTCGGAATATAATTATTGAA
ATCACAATCATAGTATGATTTTCCGAAAAACCCTTCGAGTCATATTAACG
GAAGAGCTGACAAGGCTGTTTGAAGGCCTGTAAACGCCAGCAGAATGCAA
ACCTCTGATGATGACGACACGACGGGTAAAACGGAACAATAAAGTATACT
GCTGTACAAAGTACTCCGTACAGCAGTACAGCAGTACTTCGACGCATCAT
AGGCGTCCTCTCGCATGCAAGGCAAGGTCGTGGGCTCTGTGCACCAAGCG
TTGATGCTGACAGACACCCCGTTTGTAGACGTGTGGCGTGTGTGTGTATG
TGTGTTGGCTCATGCACTCAAGACTGCTGTTGTGTCAGTGTCATGTGTGA
GAGGCAGCTTCGTGCTCGTGACCTGTGACCTGCCTGTCTGCGTCATGTGT
GCTGATGGTGTGTTGTGCAAAATGAAATGTGGGTCGTCATCATCAATCAT
GCAAACTGGTGTGTTTGTTTGTTGCGCTGTCATGTGTGGTGCTAACGTTG
GCTTGCCTGGTGCAACGGCAACCCTCTATGCTATGTTCTGTGGCACTGCT
GTTGGTTGCCTCGGTAGTATTTGGTCTGGCCAGCCTGTTGCGCGAGGCAC
ATCATTCAGAAAAAAGCATTCGATCGGGTTGAGACCTCCACTAATGATTA
ATGATTTTCTGCCAATGAAGTCTTTTTGGACTTCTTTGGTCTCGAAGGGT
TTTTCGGAAAATCATTGGCTTCGTCGGAAGGTAATAAAAGCTTGGCCAAT
CAGAGACCTTCTATCATATGATAATGATTTATTCCAATAATGATTTTCCG
ACTATCGTTAATACAGGGCCTCAGGCAACTGCAGACTCAAACCTAACCCC
CACCCATATCGAGAGGCGATTGGTGCAGTGGAGGAATCCAGCGCTCGTTA
GGGTTTATCTTGCCGAGACCAAATTTACGATTTTGATTATTGATTATTGA
TTTTGATTATGACGATTCGCACGCTCAAAATCAACGGAATCTACCTGGCC
ATCTTAGCGACGACGCAACACAGAGGCGAGATTGATTTTGATTTTGGAAA
CCGCACTCGAACAGACCAACACGGAGTAATACCGGGGTGATTATTACTCC
ACGAACAGCAGTCTGTGTCAGACAACAACAGAGGAGGGTATCGCGCTGGT
TGGTGCTGCTGCCATTCTCGCCCCAGCACCAACCATGTCTGTACCTTCAT
GGATGGGATCGCTGACGGGCTGGGGCGGCATCACGAGCAACCAGCTGTAC
AGCAGCAGCAGCAGCAGTGAGGCTGCTGGATTCTATTACATGTATTACGA
ACGATACACGAAGTGTATTTTTCCTCTGAAGTACTGCTGTGCTACGTTTT
CTTCTCGTTGCTGCTGCTTGCTGCTGTTACTGCGGCGTTGCTTGAATGAT
GAACTGACGGACTATCGGCGTAGACATTGGGCGACATGCCAGACTGCTGG
GAAACTCTATCCGTTCTACTCGCCGGTTTGTCCATGTTTCCTCTGTCGGT
CAAGCCCCAGAGCAGAGAGAGGAGGTAGTTTGAAAGCGTATCTTTCTGAT
CTACTGCGATTTTTCTGCCTCTCTTGACTTTTTAGTTACTTGGCGTATTA
AATGTACTTGTATGTACCATCATACGTCAATACAAACTACCAGGTATACG
CCAAGTAATAAAAATTCAACAGACGGAAGTGGCCCGCAGTGCCGAACGGT
CTTCGAAGCAGCCCGTTCGCCTGAACTCAAAAAAATGAAATGAAAAATTA
TTTCATTTTCTTGAGTTTGATTTCACCAACATGAGATAGTTATAAAAAAT
ACGAAGTAAATAGCTAAACCAACCAGAGGAAAGAAAAGAAAAAAAACAGA
GCGAACCGTCATAATCAAAATCAAAATCAATAATCAAAACCAAGAACTTG
GTGTCGATAAGATAAGCCTCTAGCAGCAGCAGCAGCACAGCAGCAGTAGT
AGCACAGCAACAGCAGCAGCACTATCAGCAGCATAGGCCCAAGTAGTCAT
AGAGGACGGACGAGCGAGAGAAGTAACACCACCACCACTCCCACCAGCAG
TAGCACCAGCAACAACAGCAGCTCCCACTTTTTTCTTCCTCTGCTTTACT
CCACGCACCTAAAAACTCTTCGTGTTTCTTGCCGTTGGGTGTGGCGTCCT
CGCGATCTTACAAAAACATAGAAATCAGGGCTGTGTGATGATGATGATAC
TTATTTCAACCCCGTTCAATGAATGATACCGACGAAATAGGCGTATGGTA
ATAAACGAAACCCCACTCTTGGCGCATCTACTGAGAAAAACGGCATGTGA
CTCGCTGTCGGAGTTGTGAAGTCATGGTGTTTGAACAAGTGAAGCGAAAT
AGGAAAGAGGAAAGAGAAAGGAACAAAGGGGCCCCAAGTGTACTCGAACT
TTCTTTCTCTGTTGTTTCTTTTTTTTCCAGCACCGCAGGTCAAAAATCGC
CGGCCCGGGTCAAAGCTTTGGTCCCCGTACAGTGCCGGTATGTGCCACGA
AAACCACGTCATTATAGCGGGCACCGACTTTACTGGTGAAGATTCTTCCA
TATTGCGTTGAGTTTAATCATGCATTACCACAGGCAAGCTGCGGAGAAGA
TACACCAGGTACTATTATTACTGCTGTTGAAGCCGTATGTATACTTGTTT
GGTGTGGGGATATCATATAGTGGGTAACACTGGGAGAGGCCTCTGAAGCC
TGTACTGCTCAAGCGCGATGTAGCCTGCAGACTCTGAAGCTACATAGCGC
TTGAGCAGTACAGCAGGCGGGCGTGGAATATGAACAGCAGCTCAGTTGTT
GTTAATGTTGATTCTCACATTAGCTCACCACTAAAGTCTAGCCCGTGGTC
ACAAACCAGGCACAAATCGTGCAAGCAGAAAAATATATATATATAGAAAT
GCGAAGTAAACAATAAACGATGGCCACACCCAAACAAAATCAGAGGAAGT
ACCGTTGGGGTACCTCCTGATATGGTGGCCAGAGTTCAAAATTCAGAAAT
AATGCCCAAAAAAACAAAAATTGAAAACAAAGCCAAGGCAACCCATACAG
CAGCTAACCAGCCAGAGCTCAGAGCCCAGACCGACCAAGGCACTCCAGAG
CGCAGAGCTCAGTACGGACTAAAAAAATAAGGCACACCAAGAACAAGAAA
AGACACCGAAAGCCGCAAGGTGAAAGGCGGGAGCCAGAAGACGAAGGACT
AAAAAGGAGGACAAAGAATGAGGGAGTTCAGTATCGTCCAGTAACTTGAG
CGAATAGAGTAATGCATGGACAGACACAAACAAGCTGAACGTGCTGGATG
TATACACCAGTGCAATGAGTATATCGTTGTGCACCATGGCGGCTGTTTGC
CAAATACTTTCTTCACTTTGTAGAACCTGACAGTGTTGTGTTCACATATA
CGAAGTCATATACTTTTTTCACATTTACCCCAGTGAGCCTCCACTCTCAC
ATACAATCTGCAGTTGTTTCATGAAAACGATTCCCGCATCATTAACTCAA
AAAACACAACCAACCTACCGATAGAGACAAGGTCGACGCAGAATTGTGGC
AACGTGGCAACACAGACGTCAACGGCAAAAACGAAGAGGCAGAAAAGATT
CGACCAACATTAAGCTTCATTTCTGATTTTGCTGGCACACGTATCACCTA
GTCAAAACCACTTGCCAAGTAGGGTGTGGGTGTCATGCGCTGCTCTGGTA
TGTGCGCGTGTGAGCTCCGAGAAAAACCGGCTTATTGTTGTGCACCGAAT
TGCCTCTGCCGGCACTTTAGCAGCACTGGCCGCCACAGCAGTGCCGGTGT
GGTCTTCTGGCGTGTCCCAGCTGATCCAAGCAATTAAGCGGGGATCTTAT
CGGCCGGCGGCAATATTCAACCGGCTTTGTACAGGGCCCGCAACATGTAT
GTCAACACTAATTCGAAGTTTACTTGACCTTATAAAACAGGAGACAAAAA
AAAGTGTTGAACACCCGTCTGCTGTCACGCGGCACAGCTTTAATGGACCG
CAGGTTGTTCGTGTTTTCTTGAGGTTGGCTTTTTATACCAGTAGTGATGG
TTGACACCTCACGCCTTCAAACCTTGGGTAATTCAGACGGCGGTAGATGT
ATATCTCGAGGAATGTAGTTGGCAGGGAATCTCACACCCATGTTTGGCGA
GAAATCTGCGAAAATGTGGAAGCCTCCGCCGTGTACCTTGGTTTTGATTC
GGATCGCGGCTCAGGCCACGAGAGGTTTGTCGTAGGAATCGTTTGGAATC
TTGTTTCCGCGCGGTCGACATAGCGCACCCCCAAACCTTGGATGCACCTG
ATGACCCGGCGGTAGACCCATCTCTCAAAGCAGTTGGCAAAGAATCCCGT
CCCTTTCTCGGCGAGATATGGACGAAAATTTGAAGATATGGACTCCCTCG
GGTGCAAGCAGCCGGAAATGCCTCGCAGACCATGAGGATCTCCGCTCGTA
AGTCTTGCCACGTCCAATTCTGATTTTGATTGAGATATGCATACAGCAGT
GTCAATACTGGACGTTTCCAGGACTTTGTATCGAACTTTCGATTTTCAGC
ACTCCTCGAATGAAACGTGTATTTTCACATTTCCGGTCGACGAAGGGATC
CCATGCCACCTGTCGTTCGAAGGTTTTATTTTTTTTCGTATTTTGACATC
AACAATCATGAAACCGCGCGTACATGGCGTCGGACGTCTTCGTGCCGCAT
GTTCCGACATGCGGCGGCATATCACTGGTACATGCATAGCAGTGTTGTTT
CTGTTCTTGTTTCGTGCTTGTCGTCTTTGTGGATGTGTTGTGTGTGTGGT
GTGTCTCCGCATGCAGACCCCTCGACTTATCCTTCGTCATTTTTTTCATC
GGTCTCCCCTCGGGGATGCTCAGTTTAATGTTGTAGTAGGTGTCCCTCTC
TGTAGGACTTCACTTACTTTTTTCTCATGACCTTGCGGGAGAAACGCTAC
TAGTAGTATGATCGTACAGCACTTCAACACGCTACTCGACCCAGACTCGT
GTAAATCCCAGCGTATTGGACTAAACATCGATCGCAAGACACGCTGCTGT
ACTTGATATAAGGTGCGAGTGCTTCTGACCGTATTCGTCCCCGACCGTGC
ACAGCCGCAACGCATGTTTATGGTGTGTACTGGGTGGTAGGTTGGCCGTG
TCGCGTTTTTCGCGTACGCGTGGACTGGGTGAGTATACGACGTTCCAGCG
AATACGGCCGTGCATACTTGAGTGACTTGGGAGCGTCCTGATGGTATTAT
CCTGTTTTCTCGCACTCTCATCGAACATTTCACGGTTTATTTTCCCGCTC
GAGCTCCATTCCTGCTGGAAAGTATCGTACCTTCGAGCGAGTTTTTTTTC
AACACACCTCGACAGAAGTCTCACGTACTCAAAACATGTTGCCAACATTT
TCGCTGCTTGTCTACGTTTTATCCTGCACGCCTGTTGTTGCTTGTCGCAG
GGCTCAAGCAGGCCACGACAGGTCTGTTGCAGCCGTCGGCTTTCCCTGCA
TCCATTCCAGGACCACTCCTTTTCGCGTTTCCTGGGGTTAGTCAATCGGC
TTCGTTGCCACAATCACGAGAGCACGGCGAAGGAATGGAGGAGGGGGCTT
GGGAGGAGTTAAGGGACGGGCTGGAGGGTCTATTTGAAGGTGGCTTGTGG
GCGACTAGCGTGAAGCGGAAGCGCGTGACAAAGATGAGAAAGCACAAGTG
GAGGAAAAGGCGGAAGGCTGAGCGCCAATCGGCGTCTCGGAGAGCCAACT
AGAGGTCGCCCCTACGTAATCTCAGGCAGCTGTAGACGCCTGTGGATCTG
TGATTGGTATTAAGCGGCTACGTTTTCCGGCTACAGTGGGCCCTTATAAT
TTTGTGCTTTGTCCCGAGACTTTGCAGCACCCCGTGCGTAGGTTATTCCT
ACAGCGTTGTCAAAAAGCGCATTCATGTTCCCTGTTGACTTTGCAACGCA
CGAATCTTCTGAGTTATCGTGACCCTCCAGTTGTGCACACACCGTAACCC
TGTATTTCCCTCCCGCAAAAGTCGGTGCACTTCCTGTATCTCACTATTTG
CGTAGTCAGACGGATTGGTGGCGATCCTGGAAACGGAAGATCTCTGCGAA
TGGAATAAAAAAGATGCATGTGTTACGTGTGTGTCCGCTTTCAGTCAGCA
AAGTCACCTTTTACCAATTTTTATCTCGACTCTCGTTTGGCCCTCTGGGC
CAGGCCGCTACCCAGCCAACAACACGATTGTACTCCTGTTGTGACACCAG
ACGGCCTCGCCGAATTTCGGGCTTCTTTGTGCCTCCCGTTTCCGGCTTGC
GTGGTGTCGCAAGCACCTCGGCCTAACTCTAAATGAGATACGTATCGC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig110:387901..396298+ >mRNA_P-littoralis_Contig110.81.1 ID=mRNA_P-littoralis_Contig110.81.1|Name=mRNA_P-littoralis_Contig110.81.1|organism=Pylaiella littoralis U1_48|type=CDS|length=354bp|location=Sequence derived from alignment at P-littoralis_Contig110:387901..396298+ (Pylaiella littoralis U1_48) ATGGGGAAGCATGGGTCATACTTGCCGCTGAAAGTTTCAGAGGTTTTGCA AGGGCTCAAGCAGGCCACGACAGGTCTGTTGCAGCCGTCGGCTTTCCCTG CATCCATTCCAGGACCACTCCTTTTCGCGTTTCCTGGGGTTAGTCAATCG GCTTCGTTGCCACAATCACGAGAGCACGGCGAAGGAATGGAGGAGGGGGC TTGGGAGGAGTTAAGGGACGGGCTGGAGGGTCTATTTGAAGGTGGCTTGT GGGCGACTAGCGTGAAGCGGAAGCGCGTGACAAAGATGAGAAAGCACAAG TGGAGGAAAAGGCGGAAGGCTGAGCGCCAATCGGCGTCTCGGAGAGCCAA CTAG back to top
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