prot_P-littoralis_Contig110.80.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig110.80.1
Unique Nameprot_P-littoralis_Contig110.80.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length90
Homology
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BLAST of mRNA_P-littoralis_Contig110.80.1 vs. uniprot
Match: A0A6H5J7S9_9PHAE (FCP1 homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7S9_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 7.040e-13
Identity = 47/92 (51.09%), Postives = 54/92 (58.70%), Query Frame = 0 
Query:    4 STPYAASAAATPIASAKRPKKRANQAMNIALPMRLAALGGD-----NNIVDANESGKNDGTPXXXXXXXXXXXXXXXXXXXNTTPLGKRSEE 90
            STPY+ASAAATPIASAKRPK+RANQA+N + P+R AALGGD         D N +G   G                     NTTPLGKR+EE
Sbjct:    3 STPYSASAAATPIASAKRPKRRANQAINSSSPVRRAALGGDVVSATKGSDDGNAAGTATGEGGSSFSCEGGGGASTSDTKTNTTPLGKRAEE 94
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig110.80.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J7S9_9PHAE7.040e-1351.09FCP1 homology domain-containing protein n=2 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig110contigP-littoralis_Contig110:385034..387330 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig110.80.1mRNA_P-littoralis_Contig110.80.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig110 385034..387458 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig110.80.1 ID=prot_P-littoralis_Contig110.80.1|Name=mRNA_P-littoralis_Contig110.80.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=90bp
MPSSTPYAASAAATPIASAKRPKKRANQAMNIALPMRLAALGGDNNIVDA
NESGKNDGTPPPHGGGSSSPAGGADTSSSNTTPLGKRSEE
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