mRNA_P-littoralis_Contig110.79.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig110.79.1 vs. uniprot
Match: A0A6H5J7S9_9PHAE (FCP1 homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7S9_9PHAE) HSP 1 Score: 541 bits (1394), Expect = 1.870e-178 Identity = 327/490 (66.73%), Postives = 338/490 (68.98%), Query Frame = 2
Query: 5 AGDEGPEVPSPTKVRKGSISATPHTSALCTDSRRQQEGQQQGEERXXXGIGKGSSVGKA--LEGER-EGSGD-QDQNRHKPKESSIFSPALNQSHEEARDQAPASTVGT--AXXXXXXXXXXXXXXXXXXXXXXXXATTAD------KPLAKKGRKASTT----QEVGGVKTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPGLVGVEXXXXX----------------EEFNPYCFIAHLPPYNMVKHHTPEAPVLPEKRKTRHGKELTLVLDLDETLVHCTVDPIANPDHRFEVHFNGEEFQVYVRKRPHLDAFLEAVSELFEVVVFTASQQVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDTSDEELLHLLPLLKQLINESEIAGGDVRPFIRNIFKTHELVDKARNGDQDVLESKSPLHYPALTPAGSS--QEAGRKREA 1372
A + GPE PSPTK RKGS SATP +S LC DSRR Q QQGE G SS+G A +EG+R EG GD QDQNRHKPKESSIFSPAL QS EEARDQAPASTVG A TTA +PL+KKGR AS + Q GG X PGLV E EFNPYCFIAHLPPYN VKHHTPEAP LPEKRKTRHGKELTLVLDLDETLVHCTVDPI NPDHRFEVHFNGEEFQVYVRKRPHLDAFLEAVSELFEVVVFTASQQVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDD SDEELLHLLPLLKQLI+ESE AGGDVRPFIRNIFKTHELVDKARNGD DV P L PA SS + A +KREA
Sbjct: 100 AANGGPEAPSPTKARKGSTSATPRSSGLC-DSRRSQ---QQGE-----GKXXSSSLGGAAEVEGKRLEGDGDHQDQNRHKPKESSIFSPALIQSQEEARDQAPASTVGAVAAAAVAVTEKHDRPDGDGDHVGAAHAGTTASSSSAVAEPLSKKGRTASPSPPNRQGKGGEAAAXAAPSTGEQRTDGAGEKPKHGGGNEHDGA--PGLVNREDDDGGVDGVVEXXXXXXXXXXXEFNPYCFIAHLPPYNTVKHHTPEAPALPEKRKTRHGKELTLVLDLDETLVHCTVDPIVNPDHRFEVHFNGEEFQVYVRKRPHLDAFLEAVSELFEVVVFTASQQVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDKSDEELLHLLPLLKQLISESETAGGDVRPFIRNIFKTHELVDKARNGDLDVGS-------PCLAPASSSNVEAADKKREA 571
BLAST of mRNA_P-littoralis_Contig110.79.1 vs. uniprot
Match: A0A836CBU7_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBU7_9STRA) HSP 1 Score: 289 bits (739), Expect = 2.410e-87 Identity = 150/226 (66.37%), Postives = 172/226 (76.11%), Query Frame = 2
Query: 605 EEFNPYCFIAHLPPYNMVKHHTPEAPVLPEKRKTRHG-KELTLVLDLDETLVHCTVDPIANPDHRFEVHFNGEEFQVYVRKRPHLDAFLEAVSELFEVVVFTASQQVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDTSDEELLHLLPLLKQLINESEIAGGDVRPFIRNIFKTHELVDKARNG 1279
E+F+PY FI LPPY V+ P APVLP R TR K TLVLDLDETLVHCTV+PI N DH F V FN E+F VYVRKRP LDAFL AVS LFEVVVFTASQ+VYAE LL+M+DPQ + +RLYRDAC+ ++GNYLKDLNVLGRDL +VAIVDNSPYAY +Q+ NGIPIESWFDD DEEL LLP L++L ++ D+RP I+ FKTHELV KA G
Sbjct: 2 EDFDPYQFIRQLPPYEDVRTGGPPAPVLPALRATRRSAKRATLVLDLDETLVHCTVEPIPNADHVFSVRFNDEDFNVYVRKRPGLDAFLAAVSALFEVVVFTASQRVYAEVLLDMLDPQGAHINHRLYRDACLQVDGNYLKDLNVLGRDLRRVAIVDNSPYAYAYQLANGIPIESWFDDDKDEELSLLLPFLQRLADKD-----DMRPTIQQTFKTHELVKKAPIG 222
BLAST of mRNA_P-littoralis_Contig110.79.1 vs. uniprot
Match: A0A7S2V5C9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5C9_9STRA) HSP 1 Score: 271 bits (692), Expect = 3.730e-81 Identity = 125/186 (67.20%), Postives = 159/186 (85.48%), Query Frame = 2
Query: 713 GKELTLVLDLDETLVHCTVDPIANPDHRFEVHFNGEEFQVYVRKRPHLDAFLEAVSELFEVVVFTASQQVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDTSDEELLHLLPLLKQLINESEIAGGDVRPFIRNIFKTHELVDKA 1270
K+++LVLDLDETLVHCTV+PI +PDH F VHFNGE+F+V+VRKRPHL+ FL+ VSELFEV+VFTASQ+VYA+ LL++IDP+KK+V+YRL+RDAC+ +EGN+LKDL VLGR+LS+V ++DNSPYAYG+Q+DNGIPIESWFDD D ELL L+P L+ + N DVRPF+R F+T+ELVD A
Sbjct: 8 AKQVSLVLDLDETLVHCTVEPIEHPDHCFNVHFNGEDFKVHVRKRPHLEHFLQTVSELFEVIVFTASQKVYADTLLDIIDPEKKYVQYRLFRDACLPVEGNFLKDLGVLGRELSQVVLIDNSPYAYGYQVDNGIPIESWFDDPDDTELLDLIPFLRHIHNVE-----DVRPFVREKFRTYELVDGA 188
BLAST of mRNA_P-littoralis_Contig110.79.1 vs. uniprot
Match: A0A7S3XV81_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV81_HETAK) HSP 1 Score: 275 bits (702), Expect = 2.040e-80 Identity = 140/235 (59.57%), Postives = 175/235 (74.47%), Query Frame = 2
Query: 605 EEFNPYCFIAHLPPYNMVKHHTPEAPVLPEKRKTRHGKELTLVLDLDETLVHCTVDPIANPDHRFEVHFNGEEFQVYVRKRPHLDAFLEAVSELFEVVVFTASQQVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDTSDEELLHLLPLLKQLINESEIAGGDVRPFIRNIFKTHELVDKARNGDQDVLESKSP 1309
EEF+PY F+ LPPY+ V P LP +R+TRH LVLDLDETLVHCTVDPI + DH F V FN E+FQV+VR RPHL FL A +E FEVVVFTASQ+VYA+ LL+++DP FVK+RL+R+AC+ ++GN++KDL +LGRDLSK +VDNSPYA+G+QIDNGIPIESWFDD +DEELL LLP L++L DVRP IR+ ++THELV++AR +L SP
Sbjct: 111 EEFDPYVFMKTLPPYHEVDLGRPAC--LPPRRQTRHSPPC-LVLDLDETLVHCTVDPITDADHVFTVRFNEEDFQVHVRCRPHLKTFLRACAENFEVVVFTASQRVYADALLDILDPHGAFVKHRLFREACLPVDGNFIKDLQILGRDLSKTILVDNSPYAFGYQIDNGIPIESWFDDPNDEELLKLLPFLEELRQ-----SADVRPLIRDRYRTHELVERARVPRYYLLGGGSP 337
BLAST of mRNA_P-littoralis_Contig110.79.1 vs. uniprot
Match: A0A7S2WA26_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WA26_9STRA) HSP 1 Score: 267 bits (682), Expect = 7.340e-77 Identity = 133/224 (59.38%), Postives = 169/224 (75.45%), Query Frame = 2
Query: 605 EEFNPYCFIAHLPPYNMVKHHTPEA-PVLPEKRKTRHGKELTLVLDLDETLVHCTVDPIANPDHRFEVHFNGEEFQVYVRKRPHLDAFLEAVSELFEVVVFTASQQVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDTSDEELLHLLPLLKQLINESEIAGGDVRPFIRNIFKTHELVDKAR 1273
+EFNPY FI LPPY + P P LP +R TR +TLVLDLDETLVHC+V+ + D F VHFNG E+QV+V+KRPHL+ FL V++ FEVVVFTASQQVYA++LL++IDP+++ +K+RL+RD+C+ +EGNYLKDLNVLGRDL+K +VDNSP+A+G+Q+DNGIPIESWFDD SD ELL LL L QL DVRP +R F+TH+L+ AR
Sbjct: 176 DEFNPYLFIKQLPPYAEARLGHPHMNPRLPPRRLTR-SSPVTLVLDLDETLVHCSVEATPSADLIFPVHFNGVEYQVHVQKRPHLEHFLREVAQRFEVVVFTASQQVYADKLLDLIDPKREMIKHRLFRDSCLLVEGNYLKDLNVLGRDLAKTVLVDNSPHAFGYQVDNGIPIESWFDDPSDGELLKLLAFLDQLQ-----GANDVRPLVRGHFRTHQLISAAR 393
BLAST of mRNA_P-littoralis_Contig110.79.1 vs. uniprot
Match: A0A7S3LZV9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZV9_9STRA) HSP 1 Score: 263 bits (671), Expect = 1.210e-75 Identity = 139/226 (61.50%), Postives = 171/226 (75.66%), Query Frame = 2
Query: 605 EEFNPYCFIAHLPPYNMVKHHTPEAPVLPEKRKTRHGKEL-TLVLDLDETLVHCTVDPIANPDHRFEVHFNGEEFQVYVRKRPHLDAFLEAVSELFEVVVFTASQQVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDTSDEELLHLLPLLKQLINESEIAGGDVRPFIRNIFKTHELVDKARNG 1279
+EFNPY FIAHLPP+ V + LP T +EL TL LDLDETLVHCTV+PIA PD F V+FNG+ +Q+YVRKRP+LD FLE VS+ FEVVVFTASQ+VYA+ LL+ +DP +K VKYRL+R++C+ ++GNYLKDL+VLGRDLSK +VDNSP+AY + IDNGIPIESW+DD +D ELL L+ LK L N DVRP IR FKT+ LV++ARNG
Sbjct: 141 DEFNPYQFIAHLPPHASVC--IMDKICLPPL--TVKKQELPTLALDLDETLVHCTVEPIAKPDLVFPVNFNGQIYQIYVRKRPYLDYFLETVSKSFEVVVFTASQKVYADVLLDKLDPTRKLVKYRLFRESCLLVQGNYLKDLHVLGRDLSKSILVDNSPHAYSYHIDNGIPIESWYDDDTDTELLKLIGFLKNLQNVD-----DVRPLIREHFKTYNLVERARNG 357
BLAST of mRNA_P-littoralis_Contig110.79.1 vs. uniprot
Match: W7TZE3_9STRA (Nuclear lim interactor-interacting protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZE3_9STRA) HSP 1 Score: 261 bits (666), Expect = 5.770e-74 Identity = 131/225 (58.22%), Postives = 168/225 (74.67%), Query Frame = 2
Query: 605 EEFNPYCFIAHLPPYNMVKHHTPEAPVLPEKRKTRHGKEL---TLVLDLDETLVHCTVDPIANPDHRFEVHFNGEEFQVYVRKRPHLDAFLEAVSELFEVVVFTASQQVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDTSDEELLHLLPLLKQLINESEIAGGDVRPFIRNIFKTHELVDKA 1270
EEFNP+ FI LPPY V LP++++TR L TLVLDLDETLVHCTV+P+ +PD F V FNG +QV+VRKRPHL+ FL VS++FEVVVFTASQQVYA+ LL++IDP ++ +K+RL+RDAC+ +EGNY+KDL+VLGRD+++ ++DNSPYAYG+QIDNGIPIESWF+D D ELL LLP L++L DVRP IR F++H V +A
Sbjct: 227 EEFNPFLFIKQLPPYEHVA--IQGKICLPQRKQTRSSHTLGPLTLVLDLDETLVHCTVEPVPDPDVVFPVDFNGVSYQVHVRKRPHLEEFLGRVSKMFEVVVFTASQQVYADALLDLIDPGQRLIKHRLFRDACLPVEGNYIKDLHVLGRDMARTVLIDNSPYAYGYQIDNGIPIESWFEDRDDMELLKLLPFLEELQRVD-----DVRPLIRTAFQSHLRVHEA 444
BLAST of mRNA_P-littoralis_Contig110.79.1 vs. uniprot
Match: A0A6U4HCI7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HCI7_9STRA) HSP 1 Score: 258 bits (658), Expect = 1.590e-73 Identity = 129/221 (58.37%), Postives = 166/221 (75.11%), Query Frame = 2
Query: 608 EFNPYCFIAHLPPYNMVKHHTPEAPVLPEKRKTRHGKELTLVLDLDETLVHCTVDPIANPDHRFEVHFNGEEFQVYVRKRPHLDAFLEAVSELFEVVVFTASQQVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDTSDEELLHLLPLLKQLINESEIAGGDVRPFIRNIFKTHELVDKA 1270
EFN Y F+ LPPY+ V+ P LP + K +TLVLDLDETLVHCT+D + NPDH F V FNG ++QVYVR RPHL FL AVS++FEVVVFTASQ+VYA+ LL++ID + + V++RL+R+AC+ +EGNYLKDLNVLGRDL + +VDNSP+A+G+QI+NGIPIESW+DD +D ELL LL L++L E DVRP +R+ F+T LVD+A
Sbjct: 175 EFNTYLFMKQLPPYHTVRE--PNKICLPPRNPELKDK-ITLVLDLDETLVHCTIDEVPNPDHIFPVQFNGFDYQVYVRLRPHLQHFLRAVSQMFEVVVFTASQKVYADTLLDIIDAKHELVRHRLFREACLCVEGNYLKDLNVLGRDLKRTVLVDNSPHAFGYQIENGIPIESWYDDPNDTELLRLLGFLQRLQQED-----DVRPLVRDEFQTQGLVDEA 387
BLAST of mRNA_P-littoralis_Contig110.79.1 vs. uniprot
Match: G4YYM4_PHYSP (FCP1 homology domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YYM4_PHYSP) HSP 1 Score: 251 bits (640), Expect = 9.110e-73 Identity = 124/221 (56.11%), Postives = 170/221 (76.92%), Query Frame = 2
Query: 605 EEFNPYCFIAHLPPY-NMVKHHTPEAPVLPEKRKTRHGKELTLVLDLDETLVHCTVDPIANPDHRFEVHFNGEEFQVYVRKRPHLDAFLEAVSELFEVVVFTASQQVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDTSDEELLHLLPLLKQLINESEIAGGDVRPFIRNIFKTHELVD 1264
+EFNP+ F+ LP Y ++V+ P + LPEK +R+ ++ LVLDLDETLVHC+VD + NP +F V FNG E+ V V+KRPHL+ FL+ VS+LFE+VVFTAS +VYAE+L+NM+DP + F+KYRLYR+ C+ + GNYLKDLNVLGRDLSKV +VDNSP+A+G+Q++NGIPIE+W+DD +D ELL+LLP L+ L++ DVRP + F+ +L+D
Sbjct: 40 QEFNPFYFMKTLPKYEDIVEGKRPIS--LPEK--SRNAPKICLVLDLDETLVHCSVDEVKNPHMQFPVTFNGVEYTVNVKKRPHLEYFLKRVSKLFEIVVFTASHKVYAEKLMNMLDPNRNFIKYRLYREDCLDVFGNYLKDLNVLGRDLSKVVLVDNSPHAFGYQVNNGIPIETWYDDEADAELLNLLPFLESLVDVD-----DVRPIVEKQFQIQKLID 251
BLAST of mRNA_P-littoralis_Contig110.79.1 vs. uniprot
Match: D2VDU2_NAEGR (Nuclear lim interactor-interacting protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VDU2_NAEGR) HSP 1 Score: 253 bits (647), Expect = 1.010e-72 Identity = 128/220 (58.18%), Postives = 164/220 (74.55%), Query Frame = 2
Query: 605 EEFNPYCFIAHLPPYNMVKHHTPEAPVLPEKRKTRHGKELTLVLDLDETLVHCTVDPIANPDHRFEVHFNGEEFQVYVRKRPHLDAFLEAVSELFEVVVFTASQQVYAERLLNMIDPQKKFVKYRLYRDACMALEGNYLKDLNVLGRDLSKVAIVDNSPYAYGFQIDNGIPIESWFDDTSDEELLHLLPLLKQLINESEIAGGDVRPFIRNIFKTHELVD 1264
+EFNP+ FIAHLPP + +P LP K ++ ++TLVLDLDETLVHC+ +PI +PD F V F+G E+ VYVRKRP+ FLEAVS++FEVVVFTASQ VYA++LL+++DP++K++KYR++R++C+ +E NYLKDL VLGRDLSK IVDNSP AYG+QIDNGIPI SWFDD D EL+ L+P LKQL S DVR IR F E++D
Sbjct: 118 DEFNPFDFIAHLPPKPKI---SPHQYCLPPKELSQ--PDITLVLDLDETLVHCSTEPIPDPDFTFTVLFHGVEYTVYVRKRPYFVEFLEAVSKIFEVVVFTASQSVYADKLLSILDPERKYIKYRVFRNSCIDVERNYLKDLEVLGRDLSKTCIVDNSPQAYGYQIDNGIPILSWFDDKEDRELMKLIPFLKQLYKHS-----DVRTIIRKKFHLREILD 327 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig110.79.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig110.79.1 >prot_P-littoralis_Contig110.79.1 ID=prot_P-littoralis_Contig110.79.1|Name=mRNA_P-littoralis_Contig110.79.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=276bp MVKHHTPEAPVLPEKRKTRHGKELTLVLDLDETLVHCTVDPIANPDHRFEback to top mRNA from alignment at P-littoralis_Contig110:376150..385023- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig110.79.1 ID=mRNA_P-littoralis_Contig110.79.1|Name=mRNA_P-littoralis_Contig110.79.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8874bp|location=Sequence derived from alignment at P-littoralis_Contig110:376150..385023- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig110:376150..385023- >mRNA_P-littoralis_Contig110.79.1 ID=mRNA_P-littoralis_Contig110.79.1|Name=mRNA_P-littoralis_Contig110.79.1|organism=Pylaiella littoralis U1_48|type=CDS|length=828bp|location=Sequence derived from alignment at P-littoralis_Contig110:376150..385023- (Pylaiella littoralis U1_48)back to top |