mRNA_P-littoralis_Contig110.64.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig110.64.1
Unique NamemRNA_P-littoralis_Contig110.64.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig110.64.1 vs. uniprot
Match: D8LMG2_ECTSI (Casein kinase II subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMG2_ECTSI)

HSP 1 Score: 520 bits (1340), Expect = 4.030e-176
Identity = 277/341 (81.23%), Postives = 289/341 (84.75%), Query Frame = 2 
Query:  287 MASAERMPADGVGD----ILSRVEAICIDNAGAGAGERVPAGVEGSGLQSTGASQHATDPDDDQGSSAALQEGSDGAGAKTGKVEEEAGESDEPDLTASADLEDSSEL-SASDEDSTWISWFVTLRGNEFFCEVDEDYIQDDFNLTGLSTMVPYYEYALDMILDVEMPVGQTLTEEQQEVVESAAEILYGLIHARYILTSRGMQGMFDKYQVGAFGRCPRVYCQGQHILPAGLSDVPRNCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFSHLFLLAHPELIPSRPSQAYCSRIYGFKIHQTSAYHRNNKEAGANGEGSSXXXXXXXXXKKEKARHPGR 1294
            MASAER PAD VGD    + SRV+A+ I NAG GAG+    G+E SGL+STGASQHATD DDDQGSSAALQEGSDGAGAKTGK EEE G                    SASDEDSTWISWFVTLRGNEFFCEVDEDYIQDDFNLTGLSTMVPYYEYALDMILDVEMP GQTLTEEQQEVVESAAEILYGLIHARYILTSRGMQGMFDK+QVGAFGRCPRVYCQGQ++LPAGLSDVPRNCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFSHLFLLAHPELIPSRPSQAYCSRIYGFKIHQTSAYHRNNK+  +NGEG S         KK+KARH GR
Sbjct:    1 MASAERRPADAVGDGVVDLTSRVDAVSIQNAGPGAGDG-SIGIEASGLRSTGASQHATDADDDQGSSAALQEGSDGAGAKTGKGEEEEGXXXXXXXXXXXXXXXXXXXXSASDEDSTWISWFVTLRGNEFFCEVDEDYIQDDFNLTGLSTMVPYYEYALDMILDVEMPAGQTLTEEQQEVVESAAEILYGLIHARYILTSRGMQGMFDKFQVGAFGRCPRVYCQGQNVLPAGLSDVPRNCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFSHLFLLAHPELIPSRPSQAYCSRIYGFKIHQTSAYHRNNKDP-SNGEGGSGRGSRRKSSKKDKARHSGR 339
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BLAST of mRNA_P-littoralis_Contig110.64.1 vs. uniprot
Match: A0A836CD25_9STRA (Casein kinase II subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD25_9STRA)

HSP 1 Score: 363 bits (932), Expect = 4.240e-115
Identity = 178/254 (70.08%), Postives = 205/254 (80.71%), Query Frame = 2 
Query:  542 ESDEPDLTASADLEDSSELSASDEDSTWISWFVTLRGNEFFCEVDEDYIQDDFNLTGLSTMVPYYEYALDMILDVEMPVGQT----------------------LTEEQQEVVESAAEILYGLIHARYILTSRGMQGMFDKYQVGAFGRCPRVYCQGQHILPAGLSDVPRNCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFSHLFLLAHPELIPSRPSQAYCSRIYGFKIHQTSAYHRNNKEAGANGEGSS 1237
            ESD+   +  AD E SSELSASDEDSTWISWFV+LRGNEFFCEVDE+YIQDDFNLTGLST+VPYY+YALDMILDVE+P                          LTEEQQEVVESAAE+LYGLIHAR+ILT+RGMQGM  KYQ GAFGRCPR+YCQGQ++LP GLSDVPR+CTVAVYCP+CQDIFHPKSTRQAN+DGAYFGTTF HLFLL HP++IP+RPSQ+Y  R+YGF+I+  SAY+RNN+   A+ +  S
Sbjct:   68 ESDDRVGSIDADEESSSELSASDEDSTWISWFVSLRGNEFFCEVDEEYIQDDFNLTGLSTLVPYYDYALDMILDVEVPTEHXXXXXXXXXXXXXXXXXXXXXXXLTEEQQEVVESAAEMLYGLIHARFILTTRGMQGMLSKYQTGAFGRCPRIYCQGQNVLPVGLSDVPRSCTVAVYCPRCQDIFHPKSTRQANVDGAYFGTTFPHLFLLTHPDVIPARPSQSYVPRVYGFRINAASAYYRNNRRERASEDSQS 321
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BLAST of mRNA_P-littoralis_Contig110.64.1 vs. uniprot
Match: A0A7S2Y033_9STRA (Casein kinase II subunit beta (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y033_9STRA)

HSP 1 Score: 343 bits (881), Expect = 4.540e-108
Identity = 168/234 (71.79%), Postives = 199/234 (85.04%), Query Frame = 2 
Query:  506 GAKTGKVEEEAGESD--EPDLTASADLEDSSELSASDEDSTWISWFVTLRGNEFFCEVDEDYIQDDFNLTGLSTMVPYYEYALDMILDVEMPVGQ-TLTEEQQEVVESAAEILYGLIHARYILTSRGMQGMFDKYQVGA-FGRCPRVYCQGQHILPAGLSDVPRNCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFSHLFLLAHPELIPSRPSQAYCSRIYGFKIHQTSAYH 1195
            GA  G++E ++ E+D  EP      D+E+SS+++ASDEDSTWISWFV LRGNEFFCEVDEDYIQDDFNLTGLS++VPYY+YALDM+LDVEMP+ Q  LT+EQQEVVESAAE+LYGLIHARY+LT+RGMQ M DKYQ  A FGRCPR++C+GQ  LP GLSDVPR CTVAVYCP+C DIFHPKS+RQANIDGAYFGTTF HL LL HP+L+P  PSQ Y  RIYG++I++ SAY+
Sbjct:   41 GAMKGELESQSNENDLLEP------DIEESSDMTASDEDSTWISWFVNLRGNEFFCEVDEDYIQDDFNLTGLSSLVPYYDYALDMVLDVEMPLEQQALTDEQQEVVESAAEMLYGLIHARYLLTTRGMQAMHDKYQAAACFGRCPRIFCEGQPTLPVGLSDVPRTCTVAVYCPRCCDIFHPKSSRQANIDGAYFGTTFPHLLLLTHPDLLPPPPSQRYVPRIYGYRINKDSAYY 268
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BLAST of mRNA_P-littoralis_Contig110.64.1 vs. uniprot
Match: A0A1E7EUU7_9STRA (Casein kinase II subunit beta n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUU7_9STRA)

HSP 1 Score: 336 bits (861), Expect = 3.290e-106
Identity = 148/206 (71.84%), Postives = 183/206 (88.83%), Query Frame = 2 
Query:  596 LSASDEDSTWISWFVTLRGNEFFCEVDEDYIQDDFNLTGLSTMVPYYEYALDMILDVEMPVGQTLTEEQQEVVESAAEILYGLIHARYILTSRGMQGMFDKYQVGAFGRCPRVYCQGQHILPAGLSDVPRNCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFSHLFLLAHPELIPSRPSQAYCSRIYGFKIHQTSAYHRNNKEA 1213
            +SASDED +WI+WF +LRGNEFFCEVDEDYIQDDFNLTGLS++VPYYEYALDM+LDVEMP+  +LTEEQQE+VESAAE+LYGLIHARYI+T+RGM  M++KY+  AFGRCPRV+CQGQ +LP GLSD+PRN TV V+CP+C  +F PKSTRQANIDGAYFGTTF HL+L+ HP++IP++P Q Y  R+YGFK+H+TS ++ N++EA
Sbjct:    1 MSASDEDGSWITWFCSLRGNEFFCEVDEDYIQDDFNLTGLSSLVPYYEYALDMVLDVEMPMEDSLTEEQQEIVESAAEMLYGLIHARYIVTNRGMHAMYEKYRAAAFGRCPRVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMTHPDMIPTKPQQTYVPRVYGFKVHKTSLFYINHEEA 206
[Close]
BLAST of mRNA_P-littoralis_Contig110.64.1 vs. uniprot
Match: A0A7S4IQT0_9STRA (Casein kinase II subunit beta n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IQT0_9STRA)

HSP 1 Score: 334 bits (857), Expect = 3.280e-105
Identity = 148/208 (71.15%), Postives = 184/208 (88.46%), Query Frame = 2 
Query:  590 SELSASDEDSTWISWFVTLRGNEFFCEVDEDYIQDDFNLTGLSTMVPYYEYALDMILDVEMPVGQTLTEEQQEVVESAAEILYGLIHARYILTSRGMQGMFDKYQVGAFGRCPRVYCQGQHILPAGLSDVPRNCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFSHLFLLAHPELIPSRPSQAYCSRIYGFKIHQTSAYHRNNKEA 1213
            SE+SASDED +WISWF +LRGNEFFCEVDEDYIQDDFNLTGL+ +VPYY+YALDM+LDVEMP+  +LTEEQQE+VESAAE+LYGLIHARYILT+RGM  M++KY+  +FGRCP V+CQGQ +LP GLSD+PRN TV V+CP+C  +F PKSTRQANIDGAYFGTTF HL+L+ HP++IP +P+Q Y  R+YGF++H++S Y+RN++EA
Sbjct:   18 SEISASDEDGSWISWFCSLRGNEFFCEVDEDYIQDDFNLTGLNGLVPYYDYALDMVLDVEMPMEDSLTEEQQEIVESAAEMLYGLIHARYILTNRGMHAMYEKYRSASFGRCPHVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMTHPDMIPVKPAQRYIPRVYGFRVHRSSLYYRNHEEA 225
[Close]
BLAST of mRNA_P-littoralis_Contig110.64.1 vs. uniprot
Match: A0A7S2UQR9_9STRA (Casein kinase II subunit beta n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQR9_9STRA)

HSP 1 Score: 338 bits (867), Expect = 2.660e-104
Identity = 151/215 (70.23%), Postives = 186/215 (86.51%), Query Frame = 2 
Query:  593 ELSASDEDSTWISWFVTLRGNEFFCEVDEDYIQDDFNLTGLSTMVPYYEYALDMILDVEMPVGQTLTEEQQEVVESAAEILYGLIHARYILTSRGMQGMFDKYQVGAFGRCPRVYCQGQHILPAGLSDVPRNCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFSHLFLLAHPELIPSRPSQAYCSRIYGFKIHQTSAYHRNNKEAGANGEGSS 1237
            E+SASDED +WI+WF +LRGNEFFCEVDEDYIQDDFNLTGL+ +VPYY+YALDM+LDVEMP+  TLTEEQQE+VESAAE+LYGLIHARYI+T+RGM  M++KY+   FGRCP V+CQGQ +LP GLSD+PRN TV V+CP+C  +F PKSTRQANIDGAYFGTTF HL+L+ HPE+IP++P+Q Y  R+YGFK+HQ+S Y+RN++E+    EG S
Sbjct:  192 EISASDEDGSWIAWFCSLRGNEFFCEVDEDYIQDDFNLTGLNGLVPYYDYALDMVLDVEMPMEDTLTEEQQEIVESAAEMLYGLIHARYIVTNRGMHAMYEKYRATGFGRCPHVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMTHPEIIPAKPAQNYVPRVYGFKVHQSSLYYRNHEESPPKSEGGS 406
[Close]
BLAST of mRNA_P-littoralis_Contig110.64.1 vs. uniprot
Match: A0A7S2EDQ1_TRICV (Casein kinase II subunit beta n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EDQ1_TRICV)

HSP 1 Score: 331 bits (849), Expect = 1.960e-103
Identity = 146/213 (68.54%), Postives = 187/213 (87.79%), Query Frame = 2 
Query:  596 LSASDEDSTWISWFVTLRGNEFFCEVDEDYIQDDFNLTGLSTMVPYYEYALDMILDVEMPVGQTLTEEQQEVVESAAEILYGLIHARYILTSRGMQGMFDKYQVGAFGRCPRVYCQGQHILPAGLSDVPRNCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFSHLFLLAHPELIPSRPSQAYCSRIYGFKIHQTSAYHRNNKEAGANGEGS 1234
            +SASDED +WI+WF +LRGNEFFCEVDEDYIQDDFNLTGL+++VPYY+YALDM+LDVEMP+  +LTEEQQE+VESAAE+LYGLIHARYI+T+RGM  M++KY+  +FGRCP V+CQGQ +LP GLSD+PRN TV V+CP+C  +F PKSTRQANIDGAYFGTTF HL+L+ HP++IP++P+Q Y  R+YGF+IH++S Y+RN++E   +G G+
Sbjct:   69 MSASDEDGSWIAWFCSLRGNEFFCEVDEDYIQDDFNLTGLNSLVPYYDYALDMVLDVEMPMEDSLTEEQQEIVESAAEMLYGLIHARYIVTNRGMHAMYEKYRGASFGRCPHVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMTHPDVIPAKPAQQYVPRVYGFRIHRSSLYYRNHEEQHGSGGGN 281
[Close]
BLAST of mRNA_P-littoralis_Contig110.64.1 vs. uniprot
Match: A0A7S1GN37_CYCTE (Casein kinase II subunit beta n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GN37_CYCTE)

HSP 1 Score: 335 bits (860), Expect = 3.440e-103
Identity = 148/207 (71.50%), Postives = 183/207 (88.41%), Query Frame = 2 
Query:  590 SELSASDEDSTWISWFVTLRGNEFFCEVDEDYIQDDFNLTGLSTMVPYYEYALDMILDVEMPVGQTLTEEQQEVVESAAEILYGLIHARYILTSRGMQGMFDKYQVGAFGRCPRVYCQGQHILPAGLSDVPRNCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFSHLFLLAHPELIPSRPSQAYCSRIYGFKIHQTSAYHRNNKE 1210
            SE+SASDED +WI+WF +LRGNEFFCEVDEDYIQDDFNLTGL+ +VPYY+YALDM+LDVEMP+  +LTEEQQE+VESAAE+LYGLIHARYI+T+RGM  M++KY+  +FGRCP V+CQGQ +LP GLSD+PRN TV V+CP+C  +F PKSTRQANIDGAYFGTTF HL+L+ HP+++P+RP+Q Y  R++GFKIHQ+S YHRN+ E
Sbjct:  201 SEISASDEDGSWITWFCSLRGNEFFCEVDEDYIQDDFNLTGLNGLVPYYDYALDMVLDVEMPMEDSLTEEQQEIVESAAEMLYGLIHARYIVTNRGMHAMYEKYRSASFGRCPHVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMTHPDMVPARPTQQYVPRVFGFKIHQSSLYHRNHAE 407
[Close]
BLAST of mRNA_P-littoralis_Contig110.64.1 vs. uniprot
Match: A0A7S2EKE4_9STRA (Casein kinase II subunit beta n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EKE4_9STRA)

HSP 1 Score: 332 bits (850), Expect = 1.040e-102
Identity = 147/207 (71.01%), Postives = 182/207 (87.92%), Query Frame = 2 
Query:  590 SELSASDEDSTWISWFVTLRGNEFFCEVDEDYIQDDFNLTGLSTMVPYYEYALDMILDVEMPVGQTLTEEQQEVVESAAEILYGLIHARYILTSRGMQGMFDKYQVGAFGRCPRVYCQGQHILPAGLSDVPRNCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFSHLFLLAHPELIPSRPSQAYCSRIYGFKIHQTSAYHRNNKE 1210
            SE+SASDED +WI+WF +LRGNEFFCEVDEDYIQDDFNLTGL+ +VPYY+YALDM+LDVEMP+   LTE+QQE+VESAAE+LYGLIHARYI+T+RGM  M++KY+  +FGRCP V+CQGQ +LP GLSD+PRN TV V+CP+C  +F PKSTRQANIDGAYFGTTF HL+L+ HP++IP++P+Q Y  R+YGFKIHQ+S Y RN++E
Sbjct:  127 SEISASDEDGSWIAWFCSLRGNEFFCEVDEDYIQDDFNLTGLNGLVPYYDYALDMVLDVEMPMEDALTEDQQEIVESAAEMLYGLIHARYIVTNRGMHAMYEKYRSASFGRCPHVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTFPHLYLMTHPDMIPAKPTQHYVPRVYGFKIHQSSLYFRNHEE 333
[Close]
BLAST of mRNA_P-littoralis_Contig110.64.1 vs. uniprot
Match: A0A7S1FN69_9STRA (Casein kinase II subunit beta n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FN69_9STRA)

HSP 1 Score: 330 bits (847), Expect = 1.800e-102
Identity = 150/209 (71.77%), Postives = 186/209 (89.00%), Query Frame = 2 
Query:  587 SSELSASD-EDSTWISWFVTLRGNEFFCEVDEDYIQDDFNLTGLSTMVPYYEYALDMILDVEMPVGQTLTEEQQEVVESAAEILYGLIHARYILTSRGMQGMFDKYQVGAFGRCPRVYCQGQHILPAGLSDVPRNCTVAVYCPKCQDIFHPKSTRQANIDGAYFGTTFSHLFLLAHPELIPSRPSQAYCSRIYGFKIHQTSAYHRNNKE 1210
            SSE+SASD ED +WI+WF +LRGNEFFCEV+EDYIQDDFNLTGL+++VPYY+YALDM+LDVEMP+  +LTEEQQE+VESAAE+LYGLIHARYI+T+RGM  M++KY+  AFGRCPRV+CQGQ +LP GLSD+PRN TV V+CP+C  +F PKSTRQANIDGAYFGTT  HLFL+ HP++IP++PSQ Y  R+YGFKI+Q+S Y+RN++E
Sbjct:  113 SSEISASDDEDGSWIAWFCSLRGNEFFCEVEEDYIQDDFNLTGLNSLVPYYDYALDMVLDVEMPMEDSLTEEQQEIVESAAEMLYGLIHARYIVTNRGMHAMYEKYRSAAFGRCPRVFCQGQPVLPVGLSDLPRNYTVNVFCPRCHGLFFPKSTRQANIDGAYFGTTSPHLFLMTHPDIIPAKPSQNYIPRVYGFKINQSSVYYRNHEE 321
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig110.64.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMG2_ECTSI4.030e-17681.23Casein kinase II subunit beta n=2 Tax=Ectocarpus T... [more]
A0A836CD25_9STRA4.240e-11570.08Casein kinase II subunit beta n=1 Tax=Tribonema mi... [more]
A0A7S2Y033_9STRA4.540e-10871.79Casein kinase II subunit beta (Fragment) n=1 Tax=F... [more]
A0A1E7EUU7_9STRA3.290e-10671.84Casein kinase II subunit beta n=1 Tax=Fragilariops... [more]
A0A7S4IQT0_9STRA3.280e-10571.15Casein kinase II subunit beta n=1 Tax=Odontella au... [more]
A0A7S2UQR9_9STRA2.660e-10470.23Casein kinase II subunit beta n=1 Tax=Attheya sept... [more]
A0A7S2EDQ1_TRICV1.960e-10368.54Casein kinase II subunit beta n=1 Tax=Trieres chin... [more]
A0A7S1GN37_CYCTE3.440e-10371.50Casein kinase II subunit beta n=1 Tax=Cyclophora t... [more]
A0A7S2EKE4_9STRA1.040e-10271.01Casein kinase II subunit beta n=1 Tax=Ditylum brig... [more]
A0A7S1FN69_9STRA1.800e-10271.77Casein kinase II subunit beta n=1 Tax=Corethron hy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig110contigP-littoralis_Contig110:305373..312568 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LMG2
PFAMsCK_II_beta
Model size2597
Max annot lvl2759|Eukaryota
KEGG koko:K03115
KEGG Pathwayko03008,ko04064,ko04137,ko04139,ko04310,ko04520,ko04712,ko05162,ko05168,ko05169,map03008,map04064,map04137,map04139,map04310,map04520,map04712,map05162,map05168,map05169
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001932,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005956,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007623,GO:0008134,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009628,GO:0009648,GO:0009791,GO:0009987,GO:0010228,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019207,GO:0019220,GO:0019222,GO:0019538,GO:0019887,GO:0022414,GO:0030234,GO:0031323,GO:0031399,GO:0032268,GO:0032501,GO:0032502,GO:0032991,GO:0036211,GO:0042325,GO:0042752,GO:0042753,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043549,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045859,GO:0048511,GO:0048518,GO:0048573,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051174,GO:0051246,GO:0051338,GO:0060255,GO:0061458,GO:0065007,GO:0065009,GO:0071704,GO:0071900,GO:0080090,GO:0098772,GO:0140096,GO:1901564
Exons11
Evalue3.7e-185
EggNOG OGsCOG5041@1|root,KOG3092@2759|Eukaryota
Ec32 ortholog descriptionCasein kinase II, regulatory subunit
Ec32 orthologEc-05_002640.1
Descriptionprotein kinase regulator activity
Cds size1011
COG categoryDKT
BRITEko00000,ko00001,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig110.64.1prot_P-littoralis_Contig110.64.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig110 306673..312029 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789434.2325413-UTR-P-littoralis_Contig110:305372..3066721680789434.2325413-UTR-P-littoralis_Contig110:305372..306672Pylaiella littoralis U1_48UTRP-littoralis_Contig110 305373..306672 -
1680789434.3509037-UTR-P-littoralis_Contig110:312029..3121021680789434.3509037-UTR-P-littoralis_Contig110:312029..312102Pylaiella littoralis U1_48UTRP-littoralis_Contig110 312030..312102 -
1680789434.3592973-UTR-P-littoralis_Contig110:312355..3125681680789434.3592973-UTR-P-littoralis_Contig110:312355..312568Pylaiella littoralis U1_48UTRP-littoralis_Contig110 312356..312568 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789434.2432656-CDS-P-littoralis_Contig110:306672..3068281680789434.2432656-CDS-P-littoralis_Contig110:306672..306828Pylaiella littoralis U1_48CDSP-littoralis_Contig110 306673..306828 -
1680789434.2547174-CDS-P-littoralis_Contig110:307199..3073191680789434.2547174-CDS-P-littoralis_Contig110:307199..307319Pylaiella littoralis U1_48CDSP-littoralis_Contig110 307200..307319 -
1680789434.2642138-CDS-P-littoralis_Contig110:307533..3076651680789434.2642138-CDS-P-littoralis_Contig110:307533..307665Pylaiella littoralis U1_48CDSP-littoralis_Contig110 307534..307665 -
1680789434.2738676-CDS-P-littoralis_Contig110:307905..3079891680789434.2738676-CDS-P-littoralis_Contig110:307905..307989Pylaiella littoralis U1_48CDSP-littoralis_Contig110 307906..307989 -
1680789434.284138-CDS-P-littoralis_Contig110:308405..3085401680789434.284138-CDS-P-littoralis_Contig110:308405..308540Pylaiella littoralis U1_48CDSP-littoralis_Contig110 308406..308540 -
1680789434.2945163-CDS-P-littoralis_Contig110:308970..3090491680789434.2945163-CDS-P-littoralis_Contig110:308970..309049Pylaiella littoralis U1_48CDSP-littoralis_Contig110 308971..309049 -
1680789434.3052993-CDS-P-littoralis_Contig110:309580..3096561680789434.3052993-CDS-P-littoralis_Contig110:309580..309656Pylaiella littoralis U1_48CDSP-littoralis_Contig110 309581..309656 -
1680789434.3151324-CDS-P-littoralis_Contig110:310243..3103091680789434.3151324-CDS-P-littoralis_Contig110:310243..310309Pylaiella littoralis U1_48CDSP-littoralis_Contig110 310244..310309 -
1680789434.3288987-CDS-P-littoralis_Contig110:310798..3109011680789434.3288987-CDS-P-littoralis_Contig110:310798..310901Pylaiella littoralis U1_48CDSP-littoralis_Contig110 310799..310901 -
1680789434.3380444-CDS-P-littoralis_Contig110:311969..3120291680789434.3380444-CDS-P-littoralis_Contig110:311969..312029Pylaiella littoralis U1_48CDSP-littoralis_Contig110 311970..312029 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig110.64.1

>prot_P-littoralis_Contig110.64.1 ID=prot_P-littoralis_Contig110.64.1|Name=mRNA_P-littoralis_Contig110.64.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=337bp
MASAERMPADGVGDILSRVEAICIDNAGAGAGERVPAGVEGSGLQSTGAS
QHATDPDDDQGSSAALQEGSDGAGAKTGKVEEEAGESDEPDLTASADLED
SSELSASDEDSTWISWFVTLRGNEFFCEVDEDYIQDDFNLTGLSTMVPYY
EYALDMILDVEMPVGQTLTEEQQEVVESAAEILYGLIHARYILTSRGMQG
MFDKYQVGAFGRCPRVYCQGQHILPAGLSDVPRNCTVAVYCPKCQDIFHP
KSTRQANIDGAYFGTTFSHLFLLAHPELIPSRPSQAYCSRIYGFKIHQTS
AYHRNNKEAGANGEGSSGRGSRRKSSKKEKARHPGR*
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mRNA from alignment at P-littoralis_Contig110:305373..312568-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig110.64.1 ID=mRNA_P-littoralis_Contig110.64.1|Name=mRNA_P-littoralis_Contig110.64.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7196bp|location=Sequence derived from alignment at P-littoralis_Contig110:305373..312568- (Pylaiella littoralis U1_48)
GGTTGTCGAATGGACGGCAAGCGGTTTGGGCTAGCTTGGAGAAACTGCTG
ATGTTGCACAGCGGCGAGCGTGATCGTCAGCACGGTCAGGATCGCACGTA
GCTTGAGTTCCTGCTGCATCTGGCTCATGTGTTTGTGTGTGTGCTTGGTG
TGGGCTGCGAATCACTGCGGCGCAACCTCGTGGCTGCGCGCGCGACGGAT
TCGTACTTGGAATGTGAGGTCTGTTGGCTTGGAGTACATCGATGGATTCC
CAGCGACTCGATTGGAATCCGGAGAATTGGAAAATATTTTCCGATTCCAA
GCGAAAACAACACCCCAACAAGAAAGGATGCTTTTCCGATCTTTGAATCT
GGATTCCATTTTCTCGGGTGAAACCCTTGGATTCCAATTATCGGGTCTAC
CTTGAGAGTGGGCCTGATTCTATCGTATCGTACACTGCTGTGTATTTTTC
GACGCCGTTGTGACAGCCAGCTTTTTCGGCATCAGCTTAGCGAGGGAGGA
AAATAGGAAGGCGTTGCGGGGCGGTGCAAGCTACTACGTATGGCGTCTGC
AGAACGGATGCCAGCAGACGGTGTGGGCGACATCTTATCTAGAGTAGAGG
TGAGCCTCTTTTTGCGGGTTAACGTGTTTCGTAGGCATCCCACCGGACAC
CTGACGGTGCTTGCGTGTGGTTTCTCACTCGATTCAGGAAACGTGAAATA
CGAGTAGTGCTGGTAGACCCGTCCTACATCGGGCCACATCGCACGTGCGT
TGTGTGATGTGACTCTGCAGCAGTTTATCCCACGATTTCGTGTCTAGTTT
GTGAAATACAATGAACCAAAAGCCCCTGTCGCCGGCGTCGCATTCACTCC
GTTCGTTGGCTGTGTTGGCGTGCTGTTAAGTGGTTGTCTGGTGCGATTTG
CGACATCAGTGCAAGATCCATCATACACAGGTATCGGAAATGCCATTTCT
AAGTCAATTTTTATCCTTGTTGTTTTTATGATAAGTCATGTCGTTCTGTC
AAAACCTTGACGTGCTGAAAGCTTCGCATGAGCATCTGGGAATTTCGTAT
TGTGAGCCGCCACGTACGGAGCTACGCGCAGTTTCTGTTTGACTTCGAAG
GTAGTCCGTACCAGGTATGTATTTATGCTGTCCTTTCGTCGTGCGGGCGC
ATATCATATTGAGGAGCATATATTACCACTGGGTTTGGGTTCATGCGGTC
ACGCCCGAAATGTAGATTGACTAGCGCGAGCCTGCAGCATCGCGGGACAC
GCTAATTTTTTCCGGTTACATGGAACAAGATTTACAGTATGACATCATGT
CTTTTCGATTGGCTCGATGCCATCAAATGGGATCGAACATGGGAGTATTA
ACTGGCGACAATGATATGTTGTGTGGCGTCATCAAACGTTGCAGTTCTTT
GGATTCTCAACGCTTTTGACAACAGAAGAAAGTAATCTGGTCGAACACGA
TTACATACATGCAGTCTTTCCGAGATTATAACAAATCAGTAGCGAAGCGT
TTGACGCTTGTGAAGGCTATGTATTGTCTAACGTGAAGCATAGCAACATG
TAAAGCGAGGGCTTTCTGTGATGAGTCCGCGCGCCGCAATCCTCTCACGA
CTTTTGTCTTGAAATGTCGTGCGCTCTGTTCCCTTACACATTGCCACTCT
GACGAATTGACCATTAGGCTATTTGCATTGATAATGCCGGAGCCGGTGCG
GGAGAGCGGGTTCCGGCCGGGGTCGAAGGTTCTGGTTTGCAATCTACAGG
AGCAAGTCAGCACGCCACAGGTATGTTTTACCGCTCACTTGCGGTGTGGA
TACCCAGTACAGCACGGCAAGTTCGAACAGTTCCGAAGAGGGCGTGCATA
TGAATGACATGATACAATGTGGGTACACAACTCTCTTGCCGTGTTTGTAT
AAAGTGTTTTAAGAGTTCAAGGATGGCGCCAGTGTCTTGCATGGACGATA
TACCTCCCGAAGTACTAATCTGTGTACTTTTTTGTGATCATCCACCACAG
CGTTATGTCTGTTGAACAATAGCTGAGGCTTGTGAGTGAAAAGTTCTGCT
TCATCCATCGACAGCCCTACGGTGTCTTGTTGCTGGCTGCTTTCGACCTT
GGAAAGACCAAGAATGACACCCGACCTCAAGCAATCTCGTAGCCTTACAT
CATTTGCCCATGGGGAGTCCATCTGTTGTCATAGCGTGTGTAGAATTTGT
TGCTGACCCTGAGTTTTTTTTTTGACGTGCTGCTTGTGTACGTGTATGCA
CGGTTTCAGACCCGGATGATGACCAAGGGTCTTCTGCCGCTCTTCAAGAA
GGCAGTGACGGAGCAGGGGCAAAAAGTGCGTCACCAGAGCCGACAGTAGG
CACGGTCGATAAAGCTACGGTAAAACAGCAGCACGATTGTCGACGACCGG
AAGATGAACTTAAAGTCTGTTTACTTATTTCAACCACGACGTCGATTTAT
TGTACATCGATGAGCGTAAAAATGCTTGCGGCGCCGCAGGTCAAGTACTG
ACCTTCTAAAGTCGCCTGACGGGGTTGCTTGTACAGAAACACCATGCCGC
TCGTTACCACCGCATTTTCTCTGTGTGTGTGTTGTCGTCCCATTTATTCT
GGGCAGCAGTCTACACCTTTCGGAATTAAGTGGGTGCATCAGCCGGGTTC
ACACAAGCGGGAGGTCTCACACGAGTTTTGTTTTTGCTTTTTATTTTGTT
TTATTGCCCAAACCTTCCTCCTGCGGTACGTGGACGAAAGTAATACTTCC
GCAGGGAAGGGTGAAAAAGAGAGTCCTCGTTGTGATTCCATCTTTTGCGG
GCCCCCCTGCCTAGTTTTGTGGTGTACTTTTTTGGTCGCGGCTGCTACGA
TCGAAGTGCTTTGATACCAACACTTGATTCGCCCCCTGTCGTTTTATTTT
TGCGATTAACAGCTGGGAAGGTAGAGGAGGAAGCAGGGGAGAGCGACGAG
CCGGATCTAACCGCCAGTGCTGACCTCGAGGATAGCAGGTGGAATGGGTT
GTACTCGGATATATTATGTAGTGTGCCGCTCGCTCTGTGCGCTGAAACGG
ACCGCCGTCGATATTTCACGGGCATGGTCTTTCAGCTGTGCTTCAACATG
TGCTCGTTGTGGAGAGACCGTGAAGTGGATCGCGGGTCCTTGGTGATCTA
CCGTCCGTGGTCGTGGAAAAAGCCGGACATTCCACTGACATGCCACTGTA
ATTACGTTCATCATTACAGACACACTTCCTGAACTGGGTCCGGTTCTGGA
ACAGGGGTTGCTTTTTTCAGAGCTTTTCCCCCACGTCGAAAGTGCGAGCA
TCTGCGCTTTGCAGATACAGTCGGTTGCCCAACGCATAAAAACTAGGACG
CGTTAGTTCGTTACGATTGATTCCACGTGCTGTTTGAGAACTGGAATCGG
TGATGGTCTTAAAACCCCGTACAGTAGCTCTCGCGGCGCTCAGCGACTGT
AACTGCATGTTTTGAACTTGTTCCCGTGCTGTATACATACGATCTCCGGG
GTGCATAATTTTTCCTCAGTGAGCTCTCGGCGTCAGACGAGGATAGTACC
TGGATTTCGTGGTTTGTGACACTCAGAGGCAATGAGTTCTTCTGTGAGGT
AAGCAATGCTGTCAGCTTTCCTTGCTTTTCCTGGCTTCTCTTTGTTTCTT
TCAGGTCACTTTTGACAACTCTGTCGCTGCTCTGATGTTTTGTGGAACCA
GCCATGCCGTTCGGTTTTAGTTGCTTTTTGCGATTTGGGTACTGTATGGT
TCTGCTTTTTTGGGTTCAAAACTTGAGCCGTTTGACAATTGGCTTCACGC
TCAAAGCTGGAAATCACGCTCACGAGGCCATATGGAATCAGCTCACGGCA
TTTTATGCTGTGGTATCCTACTGTGCTGTGATGTGATGCTGCCAGTGCTC
AAAGCTTGGACTTGATTCATGCATTTTGTCATGAAATTTGTATACTTGTG
AATACCGAAGATCAAAAACTAGAGTGACAGCTGAACACCGCCCTTTTCCG
CCGGTGATGATGATTTTGTACGTTGAAGGTCGACGAGGACTACATTCAGG
ACGACTTTAACCTCACGGGGCTGTCAACGATGGTGCCATATTATGAGTAC
GCCCTCGATATGATTCTTGATGTCGAGATGCCTGTGGGGCAAACGCTCAC
TGAGGAGCAACAGGTGCGGTGCATTCTCAACACAGCTGGCGCAATACAGA
GCATGTGCCGGCAGTATATTACACGCCTTTAAGAGGTCAAACGTGGTGGG
GGCAGTGTAGTACACGCCGTTGCTACCTCTCTCTCTTATCCCAAACGTGC
TTCAAATGGCACAGACGCCGTGCAATTGGATCCGTCATCTGAGCGAAAAC
GAGCACCCACTTCAGCTTGACCAAAAGTTAGTTCCCGACTGTTTTTGTCG
CCTGGCGGAATCGTACCACTCAACAACGGCCATGTATGTGGATACGGCTC
TCGCAATGCGTTTGAAAACATAATCTCGCTCTCTCAAATTCAAAACGGCT
TTGTCTTGTTTGCACCGTGCTTCCGTGGCCTTATCCCCGCCCGATTTACA
CGTGACGATATGGCGTGCGCCCTATTCAGGAGGTGGTGGAGAGTGCAGCA
GAGATCCTTTATGGTCTTATTCACGCCCGTTACATCCTTACCAGCCGAGG
GATGCAGGGGATGGTGAGCACCGAAATGAAAGCAGTGACGGAAGAGTCGC
CACCGAAGGTAGCATGTGTTTGGATGGCTTGCCCTCTTCGTACGTCGGCG
CGCGGATGTGTAGCAAGATTTTTGTCCACACCAAGCCTCGGTTACCTGTG
CTAAGTCTCGCTTGTACGGAGCATGCGTACATCCTTGTCGAGTATTAATA
TTAGGGAACAACGGCATTCACACTCCCCTCGCTTCTCTGCTTTTTTTAAT
CAGTTCGATAAGTATCAGGTCGGCGCGTTTGGGCGATGCCCACGAGTTTA
CTGCCAAGGTCAGCACATCCTTCCCGCGGGTCTCTCGGACGTTCCACGCA
ATTGCACTGTCGCAGTTTATTGCCCGAAGTGCCAGGTGAGGTGGCTTGCG
GAGGTGTCATGTCTGACGTGATATTCGCCAGTTATGTCGTCATACCGATG
TTTTTCTTTTTGGAGAAGTACTACAAAGAGAGGTGATGTTCTCTGGGAAC
GGTGGAGACGAACGGCACCCACGAGAAACGAGTTGTCTAATTTAAATGTG
AGCGCTGCTTTCTCTTCTCTGACGGCTCCTATTTTTGTGGTGTGTGCAGG
ACATTTTCCATCCCAAGAGTACACGGCAGGCCAATATCGATGGCGCGTAC
TTCGGCACGACGTTCTCGCACCTGTTCCTTCTCGCGCATCCCGAGCTCAT
CCCATCCAGACCGAGCCAGGTGAGGCCCCGATTTGATTATTTCAAAACAT
CGTGGAGACACCTTGGTAACCGAGCATTTCTTGTTGCCGCGTGTGGTAGT
CAAAAACACCGACAGCAAGCTAATCGCCCGCAGCAGCAGTCGCACGGATC
TTGATTTAGTTGGATCGCGTATTGCGTATGGTATGTCGCGCACGAAACTT
TTATTTTCTACTGCTTCCACTTTTGCGATTCCTCTCCACATTACTAGCTG
CTGCTGTGCTATCATTCGCGTTGACCACACCGTTACAGCAGTATCTCAAA
TCCCAGTCGCCTCTGCTGTGCATCACAGACTACATATCATGACTCTGTTC
AATAATTACTACTGTGTTGATTCATTCTTGATCACGCAAGGCGTACTGTT
CGAGGATATATGGCTTTAAGATCCACCAGACAAGCGCGTACCACCGCAAC
AACAAGGAGGCGGGAGCAAACGGGGAGGGGAGCAGCGGGCGAGGGTCGCG
AAGGAAAAGTAGCAAAAAGGAAAAGGCACGCCACCCCGGACGTTAGGGCA
CACGAGCCCATAGATTGCCTTTGCGCGCGGTGCGCCCGCGGCAGGCACTT
TTCCTCTGGCGCCTTGTAGATTTCATTGTTTTTCGTCGGTTGTTCAGGTT
GAGGTGTATTTTTTTGAACACATGTGGTGTTTCTCCATCGTAGGGTATTT
TGGAACCAAAATATGTGTCGAGTAGGATGCCTGAGTCAGCGTCTCACCTA
ATGTCATCAAATTGGCATCACAGCAGTGTAGCGTCGGCATCTTACCGCCT
TGATCATCGCGAGTCGAACGAGTGAAAATGATTCCGTGCCATACAAAAAA
AAATCCGCAGCCTGGCGACGCGTGACGGCACTCAAGAGTGAGGACGAAAT
AAACACGAGATCGCCGCTCCCCTTCCCCCGCGCACGTAGCCCATGACGCA
CGAAAGCGCGTTAGTTGGTGCACCGCGGCGATTGTATGTGATATATTTTC
GATGTTGCCATGAAGTATCTAACTTTATACATGTACGATTATGGCGCCTC
CTGGGGGGCAACGTAACCCGTTTATGCAGCAGTGGTACCCGGAGGCTGAG
GTGTTGGTGCCGCTGTAGCCGTCGCTGGTGGTGGGGCCGTGGGCGTACTT
TTCGAGAGCGCCTCCACATACACTGCCCGCTTCTTTGGGTTGAGGAAATA
TTCCTTGATGCCCATAACTGAGAGGAGAGGGCGTTTGAAGTGTGGAAACA
GGCAAGAAACAATGTTGTGCAGATGATGGTTTGTTGTGCGAGGGGCGTTA
TTCTTGTCGGCATTTTTGAGACGGGTTCTGGGGCAAGGAAGTGCAGAGAA
AGAAGGGACTGACTGCCAGGGCGGAAAATTATATTTTGTATATTTAGCTT
ACTTCGGTCAAAAGCATCTTGTGTTGATTTCGCTGGCTGACAAAGAAAGA
CTAGCGAGAGATACTCATTGCTGCGTCCATGTTAGGTTGCGGGTCCCTGC
GACACACTTGTAAGGTACCAGGTATGTTTTTTAATCGCAGCCCCTCTTAG
CATAGTTCCCCTAGTATTTTGGGGCTGCCACTCGAGCGTAAAGGAGAGGG
GACTGCTGTCGTATTCATACCTTTTCTTATCTGTGCATCTCGCTGTCGTT
CCTTCTTTTTCTCTCCCTTCAACTTTTCCATCTTCTCGACGTGCTCCCTA
TTTTCTCGCCAATAGTCAAGCTCGTTTACCTGCCGATGAATCAATGTCGT
GCTGGTCATTTTCGTGGAGTTCCGCAAGGCCCTGAAAACCAAGTCCCGTG
ACTTACACCAGGAGCGACGAAAGCAAAGGTTGAGAATGTTTCAAAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig110:305373..312568-

>mRNA_P-littoralis_Contig110.64.1 ID=mRNA_P-littoralis_Contig110.64.1|Name=mRNA_P-littoralis_Contig110.64.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1011bp|location=Sequence derived from alignment at P-littoralis_Contig110:305373..312568- (Pylaiella littoralis U1_48)
ATGGCGTCTGCAGAACGGATGCCAGCAGACGGTGTGGGCGACATCTTATC
TAGAGTAGAGGCTATTTGCATTGATAATGCCGGAGCCGGTGCGGGAGAGC
GGGTTCCGGCCGGGGTCGAAGGTTCTGGTTTGCAATCTACAGGAGCAAGT
CAGCACGCCACAGACCCGGATGATGACCAAGGGTCTTCTGCCGCTCTTCA
AGAAGGCAGTGACGGAGCAGGGGCAAAAACTGGGAAGGTAGAGGAGGAAG
CAGGGGAGAGCGACGAGCCGGATCTAACCGCCAGTGCTGACCTCGAGGAT
AGCAGTGAGCTCTCGGCGTCAGACGAGGATAGTACCTGGATTTCGTGGTT
TGTGACACTCAGAGGCAATGAGTTCTTCTGTGAGGTCGACGAGGACTACA
TTCAGGACGACTTTAACCTCACGGGGCTGTCAACGATGGTGCCATATTAT
GAGTACGCCCTCGATATGATTCTTGATGTCGAGATGCCTGTGGGGCAAAC
GCTCACTGAGGAGCAACAGGAGGTGGTGGAGAGTGCAGCAGAGATCCTTT
ATGGTCTTATTCACGCCCGTTACATCCTTACCAGCCGAGGGATGCAGGGG
ATGTTCGATAAGTATCAGGTCGGCGCGTTTGGGCGATGCCCACGAGTTTA
CTGCCAAGGTCAGCACATCCTTCCCGCGGGTCTCTCGGACGTTCCACGCA
ATTGCACTGTCGCAGTTTATTGCCCGAAGTGCCAGGACATTTTCCATCCC
AAGAGTACACGGCAGGCCAATATCGATGGCGCGTACTTCGGCACGACGTT
CTCGCACCTGTTCCTTCTCGCGCATCCCGAGCTCATCCCATCCAGACCGA
GCCAGGCGTACTGTTCGAGGATATATGGCTTTAAGATCCACCAGACAAGC
GCGTACCACCGCAACAACAAGGAGGCGGGAGCAAACGGGGAGGGGAGCAG
CGGGCGAGGGTCGCGAAGGAAAAGTAGCAAAAAGGAAAAGGCACGCCACC
CCGGACGTTAG
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