prot_P-littoralis_Contig110.57.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig110.57.1
Unique Nameprot_P-littoralis_Contig110.57.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length436
Homology
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BLAST of mRNA_P-littoralis_Contig110.57.1 vs. uniprot
Match: A0A7S2MHM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MHM4_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.990e-12
Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = 0 
Query:  193 RSIPTSAKQPAKKAEQRPQPRKDDSDQPIFKTLRTGESVEACYTADDKWYSAIVLQVIHGGFNVARYKVRYSAYGNEETLPWTKI 277
            R  PTS K+P  + E  P+     +  P++K LR G+ V+A ++ D  +Y A+V QVIHGGF +A+Y V Y+AYGN E + W  I
Sbjct:   18 RVTPTSPKKPTGRGESGPK-----APVPLWKRLRVGDQVQARFSEDRTYYEAVVKQVIHGGFAIAKYTVLYTAYGNSEVVSWKDI 97
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BLAST of mRNA_P-littoralis_Contig110.57.1 vs. uniprot
Match: A0A836CA01_9STRA (Tudor domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA01_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 3.910e-11
Identity = 30/59 (50.85%), Postives = 45/59 (76.27%), Query Frame = 0 
Query:  220 PIFKTLRTGESVEACYTADDKWYSAIVLQVIHGGFNVARYKVRYSAYGNEETLPWTKIR 278
            P++  L+ G++VEA YT DD WY+A VLQVIH G+++ + KV Y+ YGN+ET+ W ++R
Sbjct:  568 PLYARLKLGDAVEAQYTEDDTWYAAKVLQVIHSGYSICKVKVEYTQYGNQETILWKRVR 626
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig110.57.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S2MHM4_9STRA3.990e-1243.53Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A836CA01_9STRA3.910e-1150.85Tudor domain-containing protein n=1 Tax=Tribonema ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 213..283
e-value: 3.2E-10
score: 41.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..222
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 220..281
IPR002999Tudor domainPROSITEPS50304TUDORcoord: 224..287
score: 10.965977
IPR002999Tudor domainCDDcd04508TUDORcoord: 228..278
e-value: 1.17073E-10
score: 54.5263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig110contigP-littoralis_Contig110:284956..287767 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig110.57.1mRNA_P-littoralis_Contig110.57.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig110 284956..287767 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig110.57.1 ID=prot_P-littoralis_Contig110.57.1|Name=mRNA_P-littoralis_Contig110.57.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=436bp
SRSPTSTRFRNDEKQHRAFEPVKVKGAIVTAEQTKAAVKRRLRQVVATDA
TLKSGAKATTGGGMGWERPEMSAASEFFQSDEIAAKGGVASVAPEYEARL
TEILAVEDEEITCLGEQKAQPVSAAGSTESSVLEQKHHDAIFAPSGSISE
QRASGTAATPKAGMRSVGAIGAAARARLALTGKLGEESTTKPRSIPTSAK
QPAKKAEQRPQPRKDDSDQPIFKTLRTGESVEACYTADDKWYSAIVLQVI
HGGFNVARYKVRYSAYGNEETLPWTKIRRAREPSQEGSCSVNQGAVELET
APSEEEIAAPADEAPPPFAGMRPRALCVENKSPRRPQTSEKHSVTQAGPA
DVVNAALRPAAPGRKLSWKDKLAARKSAVNVQTAAGVHVLSKGQISLIPD
FAAQRREQNVDTAMDKSEWRAKVAFGMGNSKRRPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002999Tudor