mRNA_P-littoralis_Contig1.362.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1.362.3
Unique NamemRNA_P-littoralis_Contig1.362.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1.362.3 vs. uniprot
Match: D8LTP7_ECTSI (Two component regulator three Y domain protein/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP7_ECTSI)

HSP 1 Score: 580 bits (1494), Expect = 7.180e-191
Identity = 364/711 (51.20%), Postives = 436/711 (61.32%), Query Frame = 1
Query:  583 SLLLIIAIGAVGSALILIGTLIVCLVCRRKXXXGRKEFKE-ARPSSQREWHP-SLLVVPEKSFMSVSADGTGEVGXXXXXXXXXXXXXXENTCYSWTRGDSDIMYRSNQKNLGNNGNSSNIAASRTG----SEAAGRLRASDVYFPA----------AGGKAEGAATTDRAMDGNGSSYTSSSTTATMGSATADGASEATGDLTTAALAAVEALAQDLFVPGVREASSVVAGLVRMVSDNKDNAGDVGQRETRCRSIVDTLGKAGKVLGKVPQNRCRDSGETGALREDVRDSIAGMVQIMQSYRSKSMFSRVFVSDLFRKRQEEAEESINACVQRLQLGL----GIQLESVGGAVRDSLECHRHASEQKARTMKRRRRQKRLEQLEIPTSEVEITDEVLGRGGFGNVYLADLNGLNAAAKVIVFEDDTYEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTGKDRSPLAQSSPPQSRERRQLRRAFMLELEAMKRLKGPHTVAIYGAVTSLPDRLVLVMELLPGGDLRHRLRRAKEPLDGRVLRQIVRDVCCGMAFLHAKATVHGDLKSANVLFNGAGRAKIADFGTSLWTQHSTRLSC-TIKSREFSGMSLPWSAPEILNRRGPSFKSDVYSFGMVVWECLARKTPWKGVAGVDNLLLAVVAGERPPVPENAPVDLAALARACWAHDPAARPTFKETL 2652
            S++  I  G VG   IL G LI C + RRK    RK+    A   S+ +  P S      K F+ +S   +   G              E   YSWTRG +D+           NG+              +EA  RLRAS   F A          A      +ATT  A   NG S   S+   +     A+G      D+ TAALA  EALAQ  F PGVREA+SVVAGLV + SD+K+N  +  +R   CRSIV TL +A +VLGK  +    DS     L +DV+DSIA ++QI++SY+SK+  S+VFVS L +KRQEEAE +INA VQRLQLGL    G  L SVG AV++ L+ HR AS++     K++RRQ RL+QLEIP S+VE+T+EVLGRGGFG VYLADL+GLNAAAKV+                                                                 SRE ++ RR FM ELEAMKRL+GPHTV IYGAVTSLPDRLVLVMELL GGDLRHRL++AKEPL+ +VLR+IVRDVCCGMAFLHAKATVHGDLKSANVLF+  GRAKIADFGTSLWTQHSTRL+  T K RE  GMSLPW+APE+LNRRG SF+ DVYSFG+VVWECL+R+ PWKGVAGVD L+LAV AGERPP+PENAP D+AALA ACW HDPAARPTFK+ +
Sbjct:  231 SVIAAITGGVVGGVAILAGVLIFCCMRRRKL---RKDVSRGASAPSEHDVRPASSSAAAGKVFLPLSGALSDTYGDE------------EQASYSWTRGKTDM-----------NGDGXXXXXXXXXXLLTTEATARLRASASSFSALKSINTDDDNADPLPPASATTTAAKANNGLSLAESTAQQSASGTVAEGVGTTVLDIATAALAGAEALAQQSFFPGVREAASVVAGLVGLASDHKNNGKESEKRARWCRSIVHTLERAAEVLGKEAKAGKGDSQAVHVLLDDVQDSIADLLQIIESYKSKNALSKVFVSTLCKKRQEEAEVAINAAVQRLQLGLQVRVGQNLASVGEAVQEGLDLHRRASQESEMVTKKKRRQHRLDQLEIPASDVEVTNEVLGRGGFGTVYLADLHGLNAAAKVV-----------------------------------------------------------------SREHQRQRRMFMRELEAMKRLRGPHTVTIYGAVTSLPDRLVLVMELLQGGDLRHRLKKAKEPLEEKVLRKIVRDVCCGMAFLHAKATVHGDLKSANVLFDATGRAKIADFGTSLWTQHSTRLATYTTKPREMVGMSLPWAAPEVLNRRGSSFEGDVYSFGVVVWECLSREVPWKGVAGVDKLVLAVTAGERPPIPENAPHDIAALAEACWVHDPAARPTFKKNV 850          
BLAST of mRNA_P-littoralis_Contig1.362.3 vs. uniprot
Match: D8LTP4_ECTSI (Putative Leucine Rich Repeat Protein Kinase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP4_ECTSI)

HSP 1 Score: 565 bits (1456), Expect = 6.130e-185
Identity = 363/738 (49.19%), Postives = 437/738 (59.21%), Query Frame = 1
Query:  598 IAIGAVGSALILIGTLIVCLVCRRKXXXGRKEFKEARPSSQREWHPSLLVVPEKSFMSVSADGTGEVGXXXXXXXXXXXXXXENTCYSWTRGDSDIMYRSNQKNLGNNGNSSNIAAS---RTGSEAAGRLRASDVYFPAAGGKAEGAATTDRAMDGNGSSYTSSSTTATMGSATADGASEATGDLTTAAL---------------------------------AAVEALAQDLFVPGVREASSVVAGLVRMVSDNKDNAGDVGQRETRCRSIVDTLGKAGKVLGKVPQNRCRDSGETGALREDVRDSIAGMVQIMQSYRSKSMFSRVFVSDLFRKRQEEAEESINACVQRLQLGL----GIQLESVGGAVRDSLECHRHASEQKARTMKRRRRQKRLEQLEIPTSEVEITDEVLGRGGFGNVYLADLNGLNAAAKVIVFEDDTYEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTGKDRSPLAQSSPPQSRERRQLRRAFMLELEAMKRLKGPHTVAIYGAVTSLPDRLVLVMELLPGGDLRHRLRRAKEPLDGRVLRQIVRDVCCGMAFLHAKATVHGDLKSANVLFNGAGRAKIADFGTSLWTQHSTRLSC-TIKSREFSGMSLPWSAPEILNRRGPSFKSDVYSFGMVVWECLARKTPWKGVAGVDNLLLAVVAGERPPVPENAPVDLAALARACWAHDPAARPTFKETLAGFNLNANDYRS 2688
            I  G V  A+IL G LI C + RRK    +   ++A  SS  ++ P+    P          G G +               E   YSWTRGD  +    N  N G +G  S+ +      TG  AA RLRAS   F A   K           + N    T +  TA+  SATA   +  +                                         A+ EALAQ  F PGVREA+SVVAGLVR+ SD+K N  +  +R   CRSIV TL +AG+VL KV   R  D      L +DV+DSIA ++QI++SY+SK+  S+VFVS L +KRQEEAE +INA VQRLQLGL    G  L SVG AV++ L  H+ ASE+     K++RRQ R++QLEIP S+VE+T+EVLGRGGFG VYLADL+GLNAAAKV+                                                                 SRE ++ RR FM ELEAMKRL+GPHTV IYGAVTSLPDRLVLVMELL GGDLRHRL++AKEPL+ +VLR+IVRDVCCGMAFLHAKATVHGDLKSANVLF+  GRAKIADFGTSLWTQH+TRL+  T K RE  GMSLPW+APE+LNRRG SFK DVYSFG+VVWECL+R+ PWKGVAGVD L+LAV AGERPP+PENAP D+A LA ACW HDPAARPTFK+ LA F L++++  S
Sbjct:  230 ITAGVVVGAVILAGALIFCFMQRRKN--SKDSSRDAVASSAHKFPPASPSAPA---------GKGLLPLSGALGDTYGDGDEEKASYSWTRGDGGM----NGDNGGRSGGGSSFSPGPLLTTG--AAARLRASASSFSALNVK----------KNSNDRDVTDALPTASA-SATASAVNGGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAEALAQQSFFPGVREAASVVAGLVRLASDHKSNGRESEKRARWCRSIVHTLERAGEVLAKVKAGRGDDQA-VRVLLDDVQDSIADLLQIIESYKSKNALSKVFVSSLCKKRQEEAEVAINAAVQRLQLGLQVRVGQDLASVGEAVQEGLNLHQRASEESGMVSKKKRRQHRMDQLEIPASDVEVTNEVLGRGGFGTVYLADLHGLNAAAKVV-----------------------------------------------------------------SREHQRQRRMFMRELEAMKRLRGPHTVTIYGAVTSLPDRLVLVMELLQGGDLRHRLKKAKEPLEEKVLRKIVRDVCCGMAFLHAKATVHGDLKSANVLFDATGRAKIADFGTSLWTQHTTRLATYTTKPREMIGMSLPWAAPEVLNRRGSSFKGDVYSFGVVVWECLSREVPWKGVAGVDKLVLAVTAGERPPIPENAPHDIATLAEACWVHDPAARPTFKKVLADFKLDSSNNES 873          
BLAST of mRNA_P-littoralis_Contig1.362.3 vs. uniprot
Match: A0A6H5JVI4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI4_9PHAE)

HSP 1 Score: 565 bits (1456), Expect = 2.750e-182
Identity = 369/662 (55.74%), Postives = 439/662 (66.31%), Query Frame = 1
Query:  844 ENTCYSWTRGDSDIMYRSNQKNLGNNGNSSNIAASRTG----SEAAGRLRASDVYFPA----------AGGKAEGAATTDRAMDGNGSSYTSSSTTATMGSATADGASEATGDLTTAALAAVEALAQDLFVPGVREASSVVAGLVRMVSDNKDNAGDVGQRETRCRSIVDTLGKAGKVLGKVPQNRCR--DSGETGALREDVRDSIAGMVQIMQSYRSKSMFSRVFVSDLFRKRQEEAEESINACVQRLQLGL----GIQLESVGGAVRDSLECHRHASE---QKARTMKRRRRQKRLEQLEIPTSEVEITDEVLGRGGFGNVYLADLNGLNAAAKVIVFEDDTYED-----------------EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTGKDRSPLAQSSPPQSRERRQLRRAFMLELEAMKRLKGPHTVAIYGAVTSLPDRLVLVMELLPGGDLRHRLRRAKEPLDGRVLRQIVRDVCCGMAFLHAKATVHGDLKSANVLFNGAGRAKIADFGTSLWTQHSTRLSC-TIKSREFSGMSLPWSAPEILNRRGPSFKSDVYSFGMVVWECLARKTPWKGVAGVDNLLLAVVAGERPPVPENAPVDLAALARACWAHDPAARPTFKETLAGFNLNANDYRSVSTMTS 2706
            E   YSWTRG           N   +G++        G    +EAA RLRAS   F A          A      +ATT  A   NG S   S+   +     A+G      D+ TAALA  EALA+  F PGVREA+SVVAGLV + SD+K+N  +  +R   CRSIV TL +A +VLGK  + +    DS     L +DV+DSIA ++QI++SY+SK+  S+VFVS L +KRQEEAE +INA VQRLQLGL    G  L SVG AV++ +  HR AS    +     K++RRQ RL+QLEIP S+VE+T+EVLGRGGFG VYLADL+GLNAAAKV+VFE                       +              XXXXXXXXXXXXXXXXXXX      PT   +  L++ S       RQ RR FM ELEAMKRL+G HTV IYGAVTSLPDRLVLVMELL GGDLRHRL++AKEPL+ +VLR+IVRDVCCGMAFLHAKATVHGDLKSANVLF+  GRAKIADFGTSLWTQH+TRL+  T   RE  GMSLPW+APE+LNRRG SF+ DVYSFG+VVWECL+RK PWKGVAGVD L+LAV AGERPP+PENAP D+AALA+ACW HDPAARPTFK+ LA F L + ++ S S  +S
Sbjct:  442 EQASYSWTRG-----------NTCTSGDTGGGXXXXXGPLLTTEAAARLRASASSFSALKSINTDDDNADPLPSASATTTAAKANNGLSAAESTAQQSASGTVAEGVGTTVLDIATAALAGAEALAEQSFFPGVREAASVVAGLVGLASDHKNNGKESEKRARWCRSIVHTLERAAEVLGKAREAKGGKGDSQAVHVLLDDVQDSIADLLQIIESYKSKNSLSKVFVSTLCKKRQEEAEVAINAAVQRLQLGLQVHVGQNLASVGEAVQEGINFHRRASRASWESEMVTKKKRRQHRLDQLEIPASDVEVTNEVLGRGGFGTVYLADLHGLNAAAKVVVFEXXXXXXXEYDCTDCVSNGTDGVLDGGHGVLDCTGDGESXXXXXXXXXXXXXXXXXXXTESTTMPTDSQQQRLSRVSQQXXXXXRQ-RRMFMRELEAMKRLRGLHTVTIYGAVTSLPDRLVLVMELLQGGDLRHRLKKAKEPLEEKVLRKIVRDVCCGMAFLHAKATVHGDLKSANVLFDATGRAKIADFGTSLWTQHTTRLATYTTMPREMVGMSLPWAAPEVLNRRGSSFEGDVYSFGVVVWECLSRKVPWKGVAGVDKLVLAVTAGERPPIPENAPHDIAALAKACWVHDPAARPTFKKVLADFTLGSTNFESDSNTSS 1091          
BLAST of mRNA_P-littoralis_Contig1.362.3 vs. uniprot
Match: D8LRE9_ECTSI (Transmembrane receptor kinase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE9_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 1.170e-103
Identity = 225/512 (43.95%), Postives = 305/512 (59.57%), Query Frame = 1
Query: 1150 AALAAVEALAQDLFVPGVREASSVVAGLVRMVSDNKDNAGDVGQRETRCRSIVDTLGKAGKVLGKVPQNRCRDSGETG-ALREDVRDSIAGMVQIMQSYRSKSMFSRVFVSDLFRKRQEEAEESINACVQRLQLGLGIQLESVGGAVRDSLECHRHA-----SEQKARTMKRRRRQKRLEQLEIPTSEVEITDEVLGRGGFGNVYLADLNGLNAAAKVIVFEDDTYEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTGKDRSPLAQSSPPQSRERRQLRRAFMLELEAMKRLKGPHTVAIYGAVTSLPDRLVLVMELLPGGDLRHRLRRAKEPLDGRVLRQIVRDVCCGMAFLHAKATVHGDLKSANVLFNGAGRAKIADFGTSLWTQH--STRLSC-TIKSREFSGMSLPWSAPEILNRRGPSFKSDVYSFGMVVWECLARKTPWKGVAGVDNLLLAVVAGERPPVPENAPVDLAALARACWAHDPAARPTFKETLAG 2658
            A + A + LA    VPGV EA ++V+ LV +V D++D++     R  +CRSIV  L +A KV G    N    +G+    L +DV ++I  +V+++++Y+SK+  S+V +S LF++RQ+E +  ++  + RLQLGL +Q   VG  V+  ++ ++ +     SE  A     RRR+K L+Q+EIP   V IT+EVLGRGGFG VYLAD NG NAAAKV++   D                                           +      SPLA  S    RE  Q RRAF+ EL+AM RL+ PHTV +YGAVTSLPDR+VLVMELL GGDLR  LR  ++PL     R+I+ D+C GMAFLH+K TVHGDLKSANVL +G+GRAKI DFGTS W+QH  ST L+  T +S   + MSL WSAPE+L   G +  SDVYSFG+VVWE ++ + PW   +    +L AV+ G RP   + AP D+  +A+ACW  +P AR TF   + G
Sbjct:  480 AVMVAAQELAHRCQVPGVSEAVTLVSILVNLVKDSRDDSSGGDSRLRQCRSIVMVLNRADKVAG----NGENTTGKVARTLIDDVHEAIFDLVELIKTYQSKNKLSKVLMSTLFKRRQDELDAVVDRAIVRLQLGLQVQ---VGQDVKAGMDLYKGSIAEVQSESLADARSTRRRRK-LDQVEIPEEHVTITNEVLGRGGFGEVYLADYNGRNAAAKVLLIARDL---------------------------------------GTLSENDALESPLAGRSNTTKREDSQ-RRAFLRELDAMIRLRSPHTVNVYGAVTSLPDRMVLVMELLSGGDLRTLLRNYQQPLPEEQSRRIIGDICAGMAFLHSKDTVHGDLKSANVLLDGSGRAKIGDFGTSRWSQHTNSTGLATYTTRSSPGTQMSLAWSAPEVLESGGSTRASDVYSFGIVVWEVVSGELPWANKSRPREILSAVLMGVRPSFNDIAPTDMVEIAKACWEGEPDARTTFDAVMEG 943          
BLAST of mRNA_P-littoralis_Contig1.362.3 vs. uniprot
Match: D7FN19_ECTSI (Putative CTR1-like protein kinase/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN19_ECTSI)

HSP 1 Score: 357 bits (916), Expect = 1.840e-103
Identity = 218/512 (42.58%), Postives = 302/512 (58.98%), Query Frame = 1
Query: 1150 AALAAVEALAQDLFVPGVREASSVVAGLVRMVSDNKDNAGDVGQRETRCRSIVDTLGKAGKVLGKVPQNRCRDSGETGALREDVRDSIAGMVQIMQSYRSKSMFSRVFVSDLFRKRQEEAEESINACVQRLQLGLGIQLESVGGAVRDSLECH-RHASEQKARTM---KRRRRQKRLEQLEIPTSEVEITDEVLGRGGFGNVYLADLNGLNAAAKVIVFEDDTYEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTGKDRSPLAQSSPPQSRERRQLRRAFMLELEAMKRLKGPHTVAIYGAVTSLPDRLVLVMELLPGGDLRHRLRRAKEPLDGRVLRQIVRDVCCGMAFLHAKATVHGDLKSANVLFNGAGRAKIADFGTSLWTQHSTR----LSCTIKSREFSGMSLPWSAPEILNRRGPSFKSDVYSFGMVVWECLARKTPWKGVAGVDNLLLAVVA-GERPPVPENAPVDLAALARACWAHDPAARPTFKETLAG 2658
            A LAA E LA    +PGV EA++VV+ LV +V+D++D+         RCRSIV  L +A KVLGK       +S    AL E+V D+++ +V ++++Y++K+  S+V +S LF++RQEE +  ++  +  L LGL +Q   VG  V + L+ H R  +E KA ++   +R RRQ++L+Q+EIP   V IT+E+LGRGGFG VYLAD NG NAAAKV                                                    GK                   R+AF+ EL+AM RL+ PHTV +YGA+TSLPDRL+LV+ELLPGGDLR  L+ +++PL     RQI++D+C GMAFLH+K+TVHGDLKSAN+L +  GRAKI DFGTS WTQ++ R     + T      + +S  W+APE+L ++  S  SDVYSFG+VVWE L+R+ PW   A   ++ L VV  G+RP +P +APVD+A +   CWA +P  RPTF+    G
Sbjct:  717 AVLAAAEELAHHCQIPGVSEAATVVSILVHLVTDSRDSLSRGDLAVKRCRSIVMMLERAAKVLGKGGDT---NSEVERALLEEVHDAVSDLVDLIKTYQNKNKLSKVLMSTLFKRRQEELDAVVDKAILHLHLGLQVQ---VGQDVAEGLDLHKRSTAEAKAESLAEARRARRQRKLDQVEIPDDHVVITEEMLGRGGFGEVYLADYNGHNAAAKV----------------------------------------------------GKKIQ----------------RKAFLRELDAMIRLRHPHTVNVYGAITSLPDRLILVLELLPGGDLRTMLKNSEQPLPEEQSRQIIKDICAGMAFLHSKSTVHGDLKSANILLDARGRAKIGDFGTSRWTQNTERSTGLATYTTNPGPSTHISFAWTAPEVLEKQTTSKASDVYSFGIVVWEVLSRQLPWADQAQPRDIYLRVVIHGDRPALPADAPVDIADMLLGCWAQEPTERPTFQALSGG 1154          
BLAST of mRNA_P-littoralis_Contig1.362.3 vs. uniprot
Match: A0A6H5KA37_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA37_9PHAE)

HSP 1 Score: 353 bits (906), Expect = 7.590e-103
Identity = 218/519 (42.00%), Postives = 306/519 (58.96%), Query Frame = 1
Query: 1150 AALAAVEALAQDLFVPGVREASSVVAGLVRMVSDNKDNAGDVGQRETRCRSIVDTLGKAGKVLGKVPQNRCRDSGETGALREDVRDSIAGMVQIMQSYRSKSMFSRVFVSDLFRKRQEEAEESINACVQRLQLGLGIQLESVGGAVRDSLECH-RHASEQKARTM---KRRRRQKRLEQLEIPTSEVEITDEVLGRGGFGNVYLADLNGLNAAAKV-IVFEDDTYEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTGKDRSPLAQSSPPQSRERRQLRRAFMLELEAMKRLKGPHTVAIYGAVTSLPDRLVLVMELLPGGDLRHRLRRAKEPLDGRVLRQIVRDVCCGMAFLHAKATVHGDLKSANVLFNGAGRAK------IADFGTSLWTQHSTR----LSCTIKSREFSGMSLPWSAPEILNRRGPSFKSDVYSFGMVVWECLARKTPWKGVAGVDNLLLAVVA-GERPPVPENAPVDLAALARACWAHDPAARPTFKETLAG 2658
            A LAA E LA    +PGV EA++VV+ LV +V+D++D+         RCRSIV  L +A KVLG        +S    AL E+V D+++ +V ++++Y++K+  S+V +S LF++RQEE +  ++  +  L LGL +Q   VG  V + L+ H R  +E KA ++   +R RRQ++L+Q+EIP   V IT+E+LGRGGFG VYLAD NG NAAAKV  +       D+                                                 +S  P +   +  R+AF+ EL+AM RL+ PHTV +YGA+TSLPDRL+LV+ELLPGGDLR  L+ +++PL     RQI++D+C GMAFLH+K+TVHGDLKSAN+L +  GRAK      I DFGTS WTQ++ R     + T      + +S  W+APE+L +   S  SDVYSFG+VVWE L+R+ PW   A   ++ L VV  G+RP +P +APVD+A +   CWA +P  RPTF+    G
Sbjct:  574 AVLAAAEELAHHCQIPGVSEAATVVSILVHLVTDSRDSMSRGDGAVKRCRSIVMMLERAAKVLGNGGDT---NSEVERALIEEVHDAVSDLVDLIKTYQNKNKLSKVLMSTLFKRRQEELDAVVDKAILHLHLGLQVQ---VGQDVAEGLDLHKRSTAEAKAESLAEARRARRQRKLDQVEIPDDHVVITEEMLGRGGFGEVYLADYNGHNAAAKVQYIIHGFGRRDDVLNGP--------------------------------------------KSGQPDAVREKVQRKAFLRELDAMIRLRHPHTVNVYGAITSLPDRLILVLELLPGGDLRTMLKNSEQPLPEEQSRQIIKDICAGMAFLHSKSTVHGDLKSANILLDARGRAKARWACGIGDFGTSRWTQNTERSTGLATYTTNPGPSTHISFAWTAPEVLEKETTSKASDVYSFGIVVWEVLSRQLPWADQAQPRDIYLRVVIHGDRPAIPADAPVDIAEILLGCWAQEPTERPTFQALSGG 1042          
BLAST of mRNA_P-littoralis_Contig1.362.3 vs. uniprot
Match: D7FL57_ECTSI (Hypothetical leucine rich repeat kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL57_ECTSI)

HSP 1 Score: 348 bits (893), Expect = 1.550e-101
Identity = 224/534 (41.95%), Postives = 306/534 (57.30%), Query Frame = 1
Query: 1102 SATADGASEATGDLTTAALAAVEALAQDLFVPGVREASSVVAGLVRMVSDNKDNAGDVGQRETRCRSIVDTLGKAGKVLGKVPQNRCRDSGETG-ALREDVRDSIAGMVQIMQSYRSKSMFSRVFVSDLFRKRQEEAEESINACVQRLQLGLGIQLESVGGAVRDSLECHRH-----------ASEQKARTMKRRRRQKRLEQLEIPTSEVEITDEVLGRGGFGNVYLADLNGLNAAAKVIVFEDDTYEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTGKDRSPLAQSSPPQSRERRQLRRAFMLELEAMKRLKGPHTVAIYGAVTSLPDRLVLVMELLPGGDLRHRLRRAKEPLDGRVLRQIVRDVCCGMAFLHAKATVHGDLKSANVLFNGAGRAKIADFGTSLWTQ--HSTRLSC-TIKSREFSGMSLPWSAPEILNRRGPSFKSDVYSFGMVVWECLARKTPWKGVAGVDNLLLAVVAGERPPVPENAPVDLAALARACWAHDPAARPTFKETLAG 2658
            S+ AD  + A   L  A   A + LA    +PGV EA++ V  +  +V+D +DNA     R  +C ++V  L +A KV  K         GE    + EDV  +I  +VQ++++Y+SK+  SR+F+S LF++RQEE    ++  + RLQLGL +Q+    GAV+D  +  +            A+ +     +R +RQ++L+Q+EIP   + IT+E+LG+GGFG VYLAD NG NAAAKV+                                                A TG      A     + RE  Q  RAF+ ELEAM RL+  +TV +YGAVTSLPDR+VLVMELL GGDL   LR++K+ L G+  RQI+RD+C GMAFLH K TVHGDLKSANVL +G GRAKIADFGTS WTQ  +ST L+  T +S + + MS+ WSAPE+L   G S++SDVYSFG+VVWE + R+ PW       ++L AV+ G RP    +AP D+  +A+ACW  +P  R TF+  L G
Sbjct:  498 SSAADDQNSADIGLGRAVFEAAQELAHHCQIPGVSEAATAVCMMANLVTDGRDNARASESRLRQCSTVVMALKRAAKVADKGGDT----IGEVARGMIEDVHGAIFDLVQLIKTYQSKNKLSRLFMSTLFKRRQEELNAIVDQAMMRLQLGLQLQVGQDVGAVKDKFDSVKEGIDLYQLSLSEAASESVAEARRVKRQRKLDQVEIPAEYLSITNELLGKGGFGEVYLADYNGHNAAAKVL----------------------------------------------HIAQTG------ALDETQKQREASQ-HRAFLRELEAMIRLRSLNTVNVYGAVTSLPDRMVLVMELLAGGDLLTLLRKSKKALPGQQSRQIIRDICTGMAFLHGKNTVHGDLKSANVLLDGDGRAKIADFGTSRWTQTTNSTGLATYTTRSSQTTLMSIAWSAPEVLESEGSSYESDVYSFGIVVWEVICRELPWAKKTRPRDILTAVLRGVRPSFHVDAPADIVYIAKACWCGEPKERTTFRAILMG 974          
BLAST of mRNA_P-littoralis_Contig1.362.3 vs. uniprot
Match: D7G7F2_ECTSI (Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs/ leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F2_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 6.010e-101
Identity = 222/534 (41.57%), Postives = 304/534 (56.93%), Query Frame = 1
Query: 1102 SATADGASEATGDLTTAALAAVEALAQDLFVPGVREASSVVAGLVRMVSDNKDNAGDVGQRETRCRSIVDTLGKAGKVLGKVPQNRCRDSGETG-ALREDVRDSIAGMVQIMQSYRSKSMFSRVFVSDLFRKRQEEAEESINACVQRLQLGLGIQLESVGGAVRDSLECHRH-----------ASEQKARTMKRRRRQKRLEQLEIPTSEVEITDEVLGRGGFGNVYLADLNGLNAAAKVIVFEDDTYEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTGKDRSPLAQSSPPQSRERRQLRRAFMLELEAMKRLKGPHTVAIYGAVTSLPDRLVLVMELLPGGDLRHRLRRAKEPLDGRVLRQIVRDVCCGMAFLHAKATVHGDLKSANVLFNGAGRAKIADFGTSLWTQ--HSTRLSC-TIKSREFSGMSLPWSAPEILNRRGPSFKSDVYSFGMVVWECLARKTPWKGVAGVDNLLLAVVAGERPPVPENAPVDLAALARACWAHDPAARPTFKETLAG 2658
            S+ AD  + A   L  A LAA + L     +PGV EA++ V  +  +V+D +DNA     R  +C ++V  L +A KV  K         GE    + EDV  +I  +VQ++++Y+SK+  SR+F+S LF++RQEE    ++  + RLQLGL +Q+    GAV+D L+  +            A+ +     +R +RQ++L+Q+EIP   + ITDE+LG+GGFG VYLAD NG NAAAKV+        DE                                                      Q +      RAF+ ELEAM RL+  +TV +YGAVTSLPDR+VLVMELL GGDL   LR++K+ L G+  R+I+RD+C GMAFLH K TVHGDLKSANVL +G GRAKIADFGTS WTQ  +ST L+  T +S + + MS+ WSAPE+L   G S++SDVYSFG+VVWE ++R+ PW       ++L AV+ G RP    +AP D+  +A ACW  +P  R TF+  L G
Sbjct:  676 SSAADDQNSADIGLGRAVLAAAQELVHHCQIPGVSEAATAVCMMATLVTDGRDNARASESRLRQCSTVVMALKRAAKVADKGGDT----IGEVARGMIEDVHGAIFDLVQLIKTYQSKNKLSRLFMSTLFKRRQEELNAVVDQAIMRLQLGLQLQVGQDVGAVKDKLDSVKEGIDLYQLSLSEAASESVAEDRRVKRQRKLDQVEIPAEYLSITDELLGKGGFGEVYLADYNGHNAAAKVLHIARMGALDET-----------------------------------------------------QKQREASQHRAFLRELEAMIRLRSLNTVNVYGAVTSLPDRMVLVMELLAGGDLLTLLRKSKKALPGQQSRRIIRDICTGMAFLHGKNTVHGDLKSANVLLDGDGRAKIADFGTSRWTQTTNSTGLATYTTRSSQTTQMSIAWSAPEVLESEGSSYESDVYSFGIVVWEVISREVPWAKKTRSRDILTAVLRGVRPSFHVDAPADVVDIANACWCGEPKERTTFRAILQG 1152          
BLAST of mRNA_P-littoralis_Contig1.362.3 vs. uniprot
Match: A0A6H5JSI8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI8_9PHAE)

HSP 1 Score: 344 bits (882), Expect = 1.100e-100
Identity = 221/532 (41.54%), Postives = 301/532 (56.58%), Query Frame = 1
Query: 1156 LAAVEALAQDLFVPGVREASSVVAGLVRMVSDNKDNAGDVGQRETRCRSIVDTLGKAGKVLGKVPQNRCRDSGET-----GALREDVRDSIAGMVQIMQSYRSKSMFSRVFVSDLFRKRQEEAEESINACVQRLQLGLGIQLESVGGAVRD-------------------SLECHRHASEQKARTMKRRRRQKRLEQLEIPTSEVEITDEVLGRGGFGNVYLADLNGLNAAAKVIVFEDDTYEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTGKDRSPLAQSSPPQSRERRQLRRAFMLELEAMKRLKGPHTVAIYGAVTSLPDRLVLVMELLPGGDLRHRLRRAKEPLDGRVLRQIVRDVCCGMAFLHAKATVHGDLKSANVLFNGAGRAKIADFGTSLWTQ--HSTRLSC-TIKSREFSGMSLPWSAPEILNRRGPSFKSDVYSFGMVVWECLARKTPWKGVAGVDNLLLAVVAGERPPVPENAPVDLAALARACWAHDPAARPTFKETLAGFNLN 2670
            LAA + LA    +PGV EA++ V  +  +V+D++DNA     R  +C ++V  L +A KV  K         G+T       + EDV  +I  +VQ++++Y+SK+  SR+F+S LF++RQEE +  ++  + RLQLGL +Q+    GAV+D                    L     ASE  A+  +R +RQ++L+++EIP   + ITDE+LG+GGFG VYLAD NG NAAAKV+    D                                                     A     + RE R+ RRAF+ ELEAM RL+  +TV ++GAVTSLPDR+VLVMELL GGDL   LR++K+ L     R I+RD+C GMAFLH+K TVHGDLKSANVL +  GRAKIADFGTS WTQ  +ST L+  T KS + + MS+ WSAPE+L+    S++SDVYSFG+VVWE L+R+ PW        +L AV+ G RP     AP D+  +A+ACW  +P  R TF+  L G   N
Sbjct:  424 LAAAQELAHHCQIPGVSEAATAVCMMANLVTDSRDNARASQSRLRQCSTVVMALKRAAKVADK--------GGDTIGSVARGMIEDVHGAIFDLVQLIKTYQSKTKLSRLFMSTLFKRRQEELDAVVDQAIMRLQLGLQLQVGQDVGAVKDXXXXXXXXXXXXXXGMDLYQLSLSEAASESVAKA-RRIKRQRKLDRVEIPAEYLSITDELLGKGGFGEVYLADYNGHNAAAKVLYIAHDVG---------------------------------------------------ALDENQKQRETRE-RRAFLRELEAMIRLRSLNTVNVFGAVTSLPDRMVLVMELLAGGDLLTLLRKSKKALPEEQSRLIIRDICTGMAFLHSKNTVHGDLKSANVLLDDIGRAKIADFGTSRWTQTINSTGLTTYTTKSSQTTQMSIAWSAPEVLDSEKSSYESDVYSFGIVVWEVLSRELPWANKTRPSEVLTAVLRGIRPSFHVGAPADIVDIAKACWCGEPKERTTFRAILDGMKAN 894          
BLAST of mRNA_P-littoralis_Contig1.362.3 vs. uniprot
Match: D8LHV1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI)

HSP 1 Score: 344 bits (882), Expect = 3.530e-99
Identity = 210/510 (41.18%), Postives = 293/510 (57.45%), Query Frame = 1
Query: 1150 AALAAVEALAQDLFVPGVREASSVVAGLVRMVSDNKDNAGDVGQRETRCRSIVDTLGKAGKVLGKVPQNRCRDSGE-TGALREDVRDSIAGMVQIMQSYRSKSMFSRVFVSDLFRKRQEEAEESINACVQRLQLGLGIQLESVGGAVRDSLECHR----HASEQKARTMKRRRRQKRLEQLEIPTSEVEITDEVLGRGGFGNVYLADLNGLNAAAKVIVFEDDTYEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTGKDRSPLAQSSPPQSRERRQLRRAFMLELEAMKRLKGPHTVAIYGAVTSLPDRLVLVMELLPGGDLRHRLRRAKEPLDGRVLRQIVRDVCCGMAFLHAKATVHGDLKSANVLFNGAGRAKIADFGTSLWTQH--STRLSCTIKSREFSGMSLPWSAPEILNRRGPSFKSDVYSFGMVVWECLARKTPWKGVAGVDNLLLAVVAGERPPVPENAPVDLAALARACWAHDPAARPTFKETLAG 2658
            A L   + LA    VPGV E +++V+ LV +V+D+ DN G    R  +CRSI+  L +A KV G    N    +GE T  L EDV ++I  +V+++++Y+SK+  S+V +S LF++RQ+E +  ++  + RLQLGL +Q+     A++  ++ ++     A  +     +R RRQ++L+Q+EIP   + IT+EVLG+GGFG VYLAD NG NAAAK    ++D+                                                                  RRAF+ EL+AM RL+ PHTV +YGAVTS PD +VLVMELL GGDLR  LR +++PL     R+I+ D+C GMAFLH K TVHGDLKSANVL +G+GRAKI DFGTS W+QH  ST L+    ++  + MSL WSAPE+L   G ++ SDVYSFG+VVWE ++ + PW        +L AV+ G RP    +AP D+  +A+ACW  +P AR TF   L G
Sbjct:  643 AVLLLAQELAHHCQVPGVSEVATLVSLLVNLVTDSCDNNGGSDGRLRQCRSIIILLNRADKVAG----NGENTTGEVTRMLIEDVHEAIFDLVELIKTYQSKNKLSKVLMSTLFKRRQDELDAVVDRAMVRLQLGLHMQVGQDVSAIKTGMDQYKGSIAEAQSESLADARRTRRQRKLDQVEIPEGHLTITNEVLGKGGFGEVYLADYNGRNAAAKH--HQNDSQ-----------------------------------------------------------------RRAFLRELDAMIRLRSPHTVNVYGAVTSQPDHMVLVMELLSGGDLRTLLRTSEQPLPQEQSRRIIGDICAGMAFLHEKDTVHGDLKSANVLLDGSGRAKIGDFGTSRWSQHTHSTGLATYTTTKPSTQMSLAWSAPEVLESGGSTYASDVYSFGIVVWEVVSGELPWANKTRPREILSAVLMGARPSFRHDAPADIVEIAKACWVGEPRARTTFDAVLEG 1081          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.362.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTP7_ECTSI7.180e-19151.20Two component regulator three Y domain protein/ le... [more]
D8LTP4_ECTSI6.130e-18549.19Putative Leucine Rich Repeat Protein Kinase (Parti... [more]
A0A6H5JVI4_9PHAE2.750e-18255.74Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LRE9_ECTSI1.170e-10343.95Transmembrane receptor kinase n=2 Tax=Ectocarpus s... [more]
D7FN19_ECTSI1.840e-10342.58Putative CTR1-like protein kinase/ leucine rich re... [more]
A0A6H5KA37_9PHAE7.590e-10342.00Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FL57_ECTSI1.550e-10141.95Hypothetical leucine rich repeat kinase n=1 Tax=Ec... [more]
D7G7F2_ECTSI6.010e-10141.57Tyrosine kinase specific for activated (GTP-bound)... [more]
A0A6H5JSI8_9PHAE1.100e-10041.54Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LHV1_ECTSI3.530e-9941.18Protein kinase domain-containing protein n=1 Tax=E... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:1598967..1605504 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LTP7
Preferred nameRIPK4
PFAMsAnk_2,Ank_3,Ank_4,Ank_5,Pkinase,Pkinase_Tyr
Model size2712
Max annot lvl2759|Eukaryota
KEGG koko:K02861,ko:K08846,ko:K08847,ko:K08848,ko:K16289
KEGG Pathwayko04064,ko04210,ko04217,ko04620,ko04621,ko04622,ko04623,ko04668,ko04722,ko05131,ko05152,ko05160,ko05169,map04064,map04210,map04217,map04620,map04621,map04622,map04623,map04668,map04722,map05131,map05152,map05160,map05169
Hectar predicted targeting categoryother localisation
GOsGO:0002009,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009653,GO:0009888,GO:0009889,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032502,GO:0044093,GO:0044424,GO:0044464,GO:0048518,GO:0048729,GO:0048856,GO:0050789,GO:0050794,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051252,GO:0060255,GO:0060429,GO:0065007,GO:0065009,GO:0080090,GO:1903506,GO:2000112,GO:2001141
Exons13
Evalue1.18e-191
EggNOG OGsCOG0515@1|root,KOG0192@2759|Eukaryota
EC2.7.11.1
Descriptionprotein kinase activity
Cds size2712
COG categoryKLT
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.362.3prot_P-littoralis_Contig1.362.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1 1598967..1605504 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789322.0573611-CDS-P-littoralis_Contig1:1598966..15990391680789322.0573611-CDS-P-littoralis_Contig1:1598966..1599039Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1598967..1599039 +
1680789322.0731833-CDS-P-littoralis_Contig1:1599163..15992351680789322.0731833-CDS-P-littoralis_Contig1:1599163..1599235Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1599164..1599235 +
1680789322.0818582-CDS-P-littoralis_Contig1:1599841..15999291680789322.0818582-CDS-P-littoralis_Contig1:1599841..1599929Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1599842..1599929 +
1680789322.089907-CDS-P-littoralis_Contig1:1600100..16003181680789322.089907-CDS-P-littoralis_Contig1:1600100..1600318Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1600101..1600318 +
1680789322.1002698-CDS-P-littoralis_Contig1:1600472..16009821680789322.1002698-CDS-P-littoralis_Contig1:1600472..1600982Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1600473..1600982 +
1680789322.1136224-CDS-P-littoralis_Contig1:1601144..16013831680789322.1136224-CDS-P-littoralis_Contig1:1601144..1601383Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1601145..1601383 +
1680789322.1216323-CDS-P-littoralis_Contig1:1601522..16016871680789322.1216323-CDS-P-littoralis_Contig1:1601522..1601687Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1601523..1601687 +
1680789322.133055-CDS-P-littoralis_Contig1:1601930..16021101680789322.133055-CDS-P-littoralis_Contig1:1601930..1602110Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1601931..1602110 +
1680789322.1438262-CDS-P-littoralis_Contig1:1602554..16026321680789322.1438262-CDS-P-littoralis_Contig1:1602554..1602632Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1602555..1602632 +
1680789322.1555495-CDS-P-littoralis_Contig1:1603041..16035271680789322.1555495-CDS-P-littoralis_Contig1:1603041..1603527Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1603042..1603527 +
1680789322.170976-CDS-P-littoralis_Contig1:1603948..16041401680789322.170976-CDS-P-littoralis_Contig1:1603948..1604140Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1603949..1604140 +
1680789322.186334-CDS-P-littoralis_Contig1:1604554..16046621680789322.186334-CDS-P-littoralis_Contig1:1604554..1604662Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1604555..1604662 +
1680789322.1963928-CDS-P-littoralis_Contig1:1605201..16055041680789322.1963928-CDS-P-littoralis_Contig1:1605201..1605504Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1605202..1605504 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1.362.3

>prot_P-littoralis_Contig1.362.3 ID=prot_P-littoralis_Contig1.362.3|Name=mRNA_P-littoralis_Contig1.362.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=904bp
GDIPPRLGDLAEVVTLNLGGNELTGEIPVSLGNLTSMRSLFLQDNLLVGK
IPDGIGALVARASLDWTLHLQNNYLSGTVPDNIPYLTETELESTGGLKAD
LSGNLLTDWPDQRNGEGEKEALTIRPFLLCLSNRQKSTLFYEPFGIYKDT
KIDTLDTPLPPNAGSVTEPPQISSDAAEGSSSLSPPRSEGWDGISLLLII
AIGAVGSALILIGTLIVCLVCRRKRRRGRKEFKEARPSSQREWHPSLLVV
PEKSFMSVSADGTGEVGVGGAGNGGDGDEDEENTCYSWTRGDSDIMYRSN
QKNLGNNGNSSNIAASRTGSEAAGRLRASDVYFPAAGGKAEGAATTDRAM
DGNGSSYTSSSTTATMGSATADGASEATGDLTTAALAAVEALAQDLFVPG
VREASSVVAGLVRMVSDNKDNAGDVGQRETRCRSIVDTLGKAGKVLGKVP
QNRCRDSGETGALREDVRDSIAGMVQIMQSYRSKSMFSRVFVSDLFRKRQ
EEAEESINACVQRLQLGLGIQLESVGGAVRDSLECHRHASEQKARTMKRR
RRQKRLEQLEIPTSEVEITDEVLGRGGFGNVYLADLNGLNAAAKVIVFED
DTYEDEDEGEDDFDDADGDGGSDKGRHQHTALKLGTPTTAAAAAAPTGKD
RSPLAQSSPPQSRERRQLRRAFMLELEAMKRLKGPHTVAIYGAVTSLPDR
LVLVMELLPGGDLRHRLRRAKEPLDGRVLRQIVRDVCCGMAFLHAKATVH
GDLKSANVLFNGAGRAKIADFGTSLWTQHSTRLSCTIKSREFSGMSLPWS
APEILNRRGPSFKSDVYSFGMVVWECLARKTPWKGVAGVDNLLLAVVAGE
RPPVPENAPVDLAALARACWAHDPAARPTFKETLAGFNLNANDYRSVSTM
TSNN
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mRNA from alignment at P-littoralis_Contig1:1598967..1605504+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1.362.3 ID=mRNA_P-littoralis_Contig1.362.3|Name=mRNA_P-littoralis_Contig1.362.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=6538bp|location=Sequence derived from alignment at P-littoralis_Contig1:1598967..1605504+ (Pylaiella littoralis U1_48)
GGCGATATACCTCCACGACTCGGAGACCTGGCGGAGGTTGTGACTCTTAA CCTTGGGGGCAACGAACTCACAGGTGAAACTCTCATTTCAGTAGATAGTA TTGTCGTAGCCGAGGTGATGACCTGCTGCCTGTCTGTGTACATTTTGACA CGCCCCTCCCCTCCTTCGTACTGTGATTACCGCATATTTGTGTGCAGGAG AGATTCCCGTTTCTCTGGGCAATCTGACATCGATGCGATCTCTCTTCCTA CAAGACAATCTTCTCGTCGGTGAGTCCCAATGCATACTGCTGCAGCAGAA GTGTACGGCATAGGAAAACACAATCAGTAAAGAGCAGTGGCCGTAGCAAC GTCGTAGCACAACGAACAGCGGTACCTACAGGACGATCGGACATATCGGA CCATAAATATCTGAGTATGCGTGTGAGTTGAAAACCTGTTGAGGGCAAAG GATGCAACGGAAAAAGGTAGGTTTCAAGGAACGATAGCTTAAGATTTTCT TCCTGGAAGGTATTGGAGAAAGTTCGGTCTCCGCGCAGGCTTGACGGTCG GTCACGAATGAACCGAGAATATCGAGCACCTGTTCATGAACACCTTGAAG CCGGTATCCGGCGTCGGATGCCGCGCTTTGTAATTCATCTCCACTTATCG CGCAAACAGAAAATCGGCGTGCTGCAAGAGGAGATGAAAATGCCATCATG GTTCGCTCTTCTTACACAGGTTCGTGGGCAGGCCCCGTCGGCACAGCTTG TTACTGCATTCACCCACAAAGTCCGCTTCATTTGTTTTCCTGTCTGTGTA CTTTTTGTGTTTTTATTTAACCGTCTTCTTTTATTTTCTTGTTCACACAC TTTTTGCTGCTTTATGTGATGACAGGGAAGATCCCAGACGGAATTGGCGC GCTGGTGGCCCGGGCAAGCCTTGATTGGACATTGCATCTCCAAAACAATT ACCTCTCCGGTACGTACAATATCAATTTTATGTTTGAGACGATTAATTTA CTTTGTGTGCTTTCGTCGGTCCAGTTCGACCTTCCCTTCAAGAAAACAAA ACTCCGAGCATCAATAAAACTCCGCAACACGCCCGCGCACCCCCCCCCGT CCTTTGTTTTTCTCTGCTGTCACAAAAAAGGAAGTGTCCCCGATAATATT CCATACTTGACGGAAACCGAGCTGGAGTCCACTGGAGGCTTGAAGGCGGA CCTATCGGGCAACCTGCTGACCGATTGGCCTGACCAGAGAAATGGTGAGG GAGAAAAAGAGGCTCTCACAATTCGCCCTTTTTTACTATGCTTATCGAAC CGACAAAAATCAACGCTTTTTTATGAACCCTTTGGTATCTATAAAGATAC AAGTAGGTAGGAGGAGATGATACGTTATGGATTCGGTTTCGTCTTTTCGC CTTGTTTTTTTTTATGGGTCGCTTTGGTCCAGCCTTTAATTGCACTCTGG TTGAAGAAGTCAGCAGACGAAGTCATGCTACTGGTCCAACCGGCAGTAAA CTGCAGAAATCGACACGCTCGACACCCCCCTCCCCCCCAACGCAGGGAGC GTGACGGAGCCGCCACAGATTTCATCAGATGCGGCCGAAGGATCGAGCAG TCTCTCTCCACCACGGTCTGAAGGATGGGATGGAATATCGTTACTGCTCA TTATCGCGATCGGAGCAGTCGGGAGCGCGTTGATCCTGATCGGCACGCTT ATCGTATGCCTGGTGTGCAGAAGGAAGAGAAGAAGGGGGCGGAAAGAGTT CAAGGAAGCGCGTCCGAGTAGTCAGAGGGAATGGCATCCGTCATTACTGG TAGTGCCAGAAAAGAGTTTTATGTCCGTGTCGGCGGATGGGACCGGAGAG GTTGGCGTCGGCGGTGCAGGTAACGGCGGAGATGGAGACGAAGACGAAGA GAACACTTGTTACTCGTGGACGAGAGGGGATTCCGATATCATGTACCGCA GCAACCAGAAAAACCTCGGCAACAACGGCAACAGCAGCAACATTGCCGCC AGCAGGACCGGCAGCGGTAAGGTGGTCAGCGGAGCGCTCCCCAAGATTTT AGAGGGGGCTACCATTGGCGGCGGCGGCGTTGGTGGCAATGACGAGGCTC CCGCGTCAACGGTGGTGGTCAAGGCAGCAGAAGCGGCAGCACGACTACCG GTACCGGGACAGAGGGTTTTAACCCTAGAGGCCGCTGGTCGTCTTCGTGC TTCCGATGTTTATTTCCCCGCCGCCGGCGGCAAGGCCGAAGGTGCCGCAA CGACCGACAGAGCTATGGACGGGAACGGCAGCAGCTACACCAGCAGCTCG ACGACGGCGACGATGGGATCGGCAACAGCCGACGGCGCTTCAGAAGCTAC AGGAGACCTGACGACGGCTGCCTTGGCGGCAGTGGAGGCGCTGGCTCAGG ATTTATTCGTTCCAGGGGTAAGCAAGTATCCGTTTCGCTATGTAGGTGAG AGCTCGTCAGCTGTCAGCTGCCAGCCCCATTTTCTTCTTCATGATTTCAT GAATTTTCTTGTGCGGCATGTTCTTCTCGTTGTCTTTTACGAACGAAAAC GTGAAGGTCCGAGAGGCGTCTTCGGTGGTGGCCGGGCTGGTCAGGATGGT GTCGGACAACAAGGATAACGCGGGAGATGTGGGCCAAAGGGAAACGCGGT GCCGATCGATCGTGGACACGCTGGGGAAGGCCGGGAAGGTGCTGGGGAAG GTACCACAAAACCGCTGCCGTGTACTCACAGCTAAAACTGCTGGATAAGG CTGTTTCCCGGGGTTTTGGTTCGAGATTGATTTTTTGGGAGTCTTAGTAA ACTAAAGTACCTGTACAAAATCTTTTACTCCCGCCCCCGCCCCAACCTGC GCGCCCTGCTGCTGTTGTGTCGTCTCGTTTCTTCTCTCTCGCTAATATTA GCCATCCTTTGTGTCACGTTTTCCCCTGTTTTACTTTTGTTGTGTTTTGA AGGTTGGAGGACAGGACAGTGGCGAGACAGGCGCCCTTCGCGAAGATGTC CGGGACTCCATTGCCGGCATGGTGCAGATCATGCAGTCCTACAGAAGCAA AAGCATGTTCTCGAGGGTGTTCGTCAGCGACCTCTTCAGGAAAAGACAGG AGGAAGCGGAGGAGAGCATCAACGCATGCGTTCAGCGGCTGCAGGTATAC AAACAGGAACAGCGGCAGTTGTATTGCTTGCGTTGCTCTCGGTTGTCAAA TATGGCAATACCTACAGACGGTTTGTCACCTACATCCTAAAAAAAAAACA TCGGAGTGAGGCAGTTCACCGTTTCGCCTAGCAACCCTTGAGAGTCCATG CTTTCTTACTGAGGGTATTTATTTTTCGTTATATTTACATGTACGTTTGT GTATATGTAGTCTTGGCTACCCTCTCATTTCGGGTACGTCGGTCCCTCGC CTTCTTAGCCCCACTGCATCAATTAAATTACGTCAGCCCAAAAGACACAC GTGTCTGTCGCTACCTCGCCTTAATTCTACGTAAACATGCTAACCTTAGG TTGTCATTCCTTGACAAACGCACAAATGTACACCCAATCAACTCCGACAC ACCCATGTTCCCAACAGAGTCCCGACACCGCGCCGCAGCTTGGTCTGGGA ATCCAGCTGGAGTCAGTGGGGGGAGCGGTTCGAGATAGTCTCGAGTGTCA CCGCCACGCCTCAGAGGTGCGGTGAAGTTGACCCTGCTTCCGGAAGGATG TCCACAATAATTTAGAGTGGCCACTGCTTGCGAACCAAGTCCATCGTTCA TGGTTATTTCTGTCGAGCACCCACGTCCGGATGCTAAACGGGGCAGTGCC AGCAAACTCAAGACTTACGCTCATTGCCCTACCCCACCACGAGCAATCGG TCTAGAGTTGTACGTGTACGCATAGAGAGGACGCTCTTGCGTTGGTGATT TCGCTTGGGCGGCGGGAGCGTAACCTAACAATGGTTAGTGAAGAGAGTTT ACCCCCCAGCCATGCCACAACAAGCCAACGCGCGGAGGCACACGCACATT TAACAGCAAACCTGAGACTCTAGACCCCTCGTCATTAACGTAACCACTGA CCTCATGCCGCAACAGACAAAGAAGCAGAAGGCGAGGACTATGAAGAGGA GGCGTCGACAGAAGCGTTTGGAACAACTTGAAATTCCCACGTCGGAGGTG GAAATCACGGACGAGGTTCTGGGCAGAGGCGGCTTCGGGAATGTGTACCT GGCCGATTTGAACGGCCTTAACGCGGCGGCCAAGGTCATCGTGTTCGAAG ACGACACGTACGAAGACGAAGACGAAGGCGAAGATGATTTTGACGATGCT GATGGTGATGGTGGGAGTGATAAAGGACGCCACCAGCACACGGCACTCAA ACTCGGAACGCCAACAACGGCGGCGGCGGCAGCAGCACCAACCGGCAAGG ACAGATCGCCCTTAGCACAGTCATCACCACCGCAATCTCGAGAACGCCGC CAGCTGCGAAGAGCCTTCATGCTCGAACTCGAGGCCATGAAGCGCCTCAA GGGACCTCACACCGTTGCCATCTACGGGGCCGTCACCAGTCTGCCGGACC GGCTCGTCCTGGTGAGTCGGCTAAAACAAGCTTGCTCAAGGAAGCGCCGC CCCACACGAAGCAGACTCCCGCATCGACTCCAAGCAGCACTTCCTGAGTG CATCGGCCACAGCGCACTTTGCGAGGTTTTAGACATGCCTGTGCTTCGGG ATGAACAAAAAATATTTGTACAGGCAGTATATTTTGTCAGCGGCGGTCGG AAGGGGAGCGTTGGGATCAAAACATTTCCCGACGGGGAGCTTTGGAGACA AACGTGTGTCTTGTATTCAGTGCATTTTTGATAGAACGCCGGACGTGTCG TCATTTTGTTTTTTTGGGGTACCCGGCATTTGATACTGATCTGCGGGGAC CCTGAAGTCTATGTATTGGGACAATTATTTATTATTCCCCAATATTTACG GAATACCGGTATTGTTATATACTTGTATATAGGTCATGGAGCTCCTTCCC GGGGGAGATTTGCGCCACCGGCTGCGGAGGGCAAAAGAGCCCTTGGACGG GAGGGTTTTGAGGCAGATCGTGAGGGATGTTTGTTGTGGAATGGCGTTTC TGCACGCCAAGGCGACCGTGCACGGGGACCTCAAATCGGCTAACGTCTTG TTCAACGGCGCCGGAAGAGCCAAGGTGTGTCTTTGTTTTCATGTGTGTTT TCGTGCGTTTTCGTGTATTTGGTGGTGGAATTTTGTTTTGTCAGTGTGTT TTCTTAAGGTTGTGCTGAACGTGGTAAACAAAAGCCAAAGCGCTCTGTTT TAGGCTTGTTTTTGGTAGTAGCACACTGAGCTCTTGTTGTGTCAAGTAAA CGATATGTACGTGTGTAAAAAATTATTAACAGCGTCAAGGTGTACGCTGT GACAACTTGTAGAACGGGAGCATGTGCAGTTCAGCTTATGAGCTCCAATT TAACACCAAACCAGTGTAACATATGTAGTACGTGTGGTCAGTGTCAAGCC AAACCACTCGAGATCCCCCTCGTTACCTCGTCCTTTCGTTCCATGTTTTT GTTTCTGTTCGCCCCTTCCACCCTCTTGATGTTCTCAGATCGCAGATTTT GGCACCTCGCTGTGGACGCAGCACTCCACGCGTCTGTCGTGCACGATCAA GTCGAGGGAATTTTCCGGCATGAGTCTCCCGTGGTCCGCTCCGGAGGTAC GTACACAAACAAAAATGCCTTGTCGTACCATATGAACAACGATGCCGAAA CATGGCTCGAAACACCGCTAGGAACGACCCTTTATGGCCAACACTCCGGT AACGGTGTGTGGATGCAATGCTTCAAATTATTTTGGGTTCCTCTTTATTA TCATTTCAAAGCAGTGCCAAAAACCGAATAATGCCACCCCCCCCCCCTCC CCTCCCTCTCTAGAGGATAACAGGAAAACCACGCAAAGGGATGTCGTGAT GGGGGAGATGAGGAAACCGTAAGGCCGGGATGGAAGATGTACATACATCT GTTAATACCCGAAAACGATCGCTACGAAATACGTAATGATGGTGGCCACA CGAGGCCAAACAGATAGGAGGTACAGTGGTAAACACAAGTAACACATTTA TTGTGAAGGGTATAAGAATGAGTTAAGAGCGCCCCCATTGTGGGTCATGA CTTGGGAGTAGGAAACGACTGAGGCAACAGCAAAAAATTATGGACCCCCC CCCCGCCGCCCTTTTCTTTCTTGCGTACCTTCCAGATTTTGAACAGACGC GGCCCCAGCTTCAAGAGTGACGTGTACAGCTTCGGCATGGTGGTGTGGGA GTGCCTGGCCCGCAAGACTCCGTGGAAGGGGGTCGCCGGGGTAGACAACT TACTGCTAGCCGTTGTCGCAGGAGAAAGGCCACCCGTTCCCGAGAACGCT CCCGTAGATCTCGCGGCGTTGGCGAGGGCGTGCTGGGCCCACGATCCGGC AGCCCGACCAACTTTCAAGGAGACGTTGGCCGGTTTCAATCTCAACGCTA ACGACTACAGATCTGTCAGCACCATGACAAGCAATAAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig1:1598967..1605504+

>mRNA_P-littoralis_Contig1.362.3 ID=mRNA_P-littoralis_Contig1.362.3|Name=mRNA_P-littoralis_Contig1.362.3|organism=Pylaiella littoralis U1_48|type=CDS|length=2712bp|location=Sequence derived from alignment at P-littoralis_Contig1:1598967..1605504+ (Pylaiella littoralis U1_48)
GGCGATATACCTCCACGACTCGGAGACCTGGCGGAGGTTGTGACTCTTAA
CCTTGGGGGCAACGAACTCACAGGAGAGATTCCCGTTTCTCTGGGCAATC
TGACATCGATGCGATCTCTCTTCCTACAAGACAATCTTCTCGTCGGGAAG
ATCCCAGACGGAATTGGCGCGCTGGTGGCCCGGGCAAGCCTTGATTGGAC
ATTGCATCTCCAAAACAATTACCTCTCCGGTACTGTCCCCGATAATATTC
CATACTTGACGGAAACCGAGCTGGAGTCCACTGGAGGCTTGAAGGCGGAC
CTATCGGGCAACCTGCTGACCGATTGGCCTGACCAGAGAAATGGTGAGGG
AGAAAAAGAGGCTCTCACAATTCGCCCTTTTTTACTATGCTTATCGAACC
GACAAAAATCAACGCTTTTTTATGAACCCTTTGGTATCTATAAAGATACA
AAAATCGACACGCTCGACACCCCCCTCCCCCCCAACGCAGGGAGCGTGAC
GGAGCCGCCACAGATTTCATCAGATGCGGCCGAAGGATCGAGCAGTCTCT
CTCCACCACGGTCTGAAGGATGGGATGGAATATCGTTACTGCTCATTATC
GCGATCGGAGCAGTCGGGAGCGCGTTGATCCTGATCGGCACGCTTATCGT
ATGCCTGGTGTGCAGAAGGAAGAGAAGAAGGGGGCGGAAAGAGTTCAAGG
AAGCGCGTCCGAGTAGTCAGAGGGAATGGCATCCGTCATTACTGGTAGTG
CCAGAAAAGAGTTTTATGTCCGTGTCGGCGGATGGGACCGGAGAGGTTGG
CGTCGGCGGTGCAGGTAACGGCGGAGATGGAGACGAAGACGAAGAGAACA
CTTGTTACTCGTGGACGAGAGGGGATTCCGATATCATGTACCGCAGCAAC
CAGAAAAACCTCGGCAACAACGGCAACAGCAGCAACATTGCCGCCAGCAG
GACCGGCAGCGAGGCCGCTGGTCGTCTTCGTGCTTCCGATGTTTATTTCC
CCGCCGCCGGCGGCAAGGCCGAAGGTGCCGCAACGACCGACAGAGCTATG
GACGGGAACGGCAGCAGCTACACCAGCAGCTCGACGACGGCGACGATGGG
ATCGGCAACAGCCGACGGCGCTTCAGAAGCTACAGGAGACCTGACGACGG
CTGCCTTGGCGGCAGTGGAGGCGCTGGCTCAGGATTTATTCGTTCCAGGG
GTCCGAGAGGCGTCTTCGGTGGTGGCCGGGCTGGTCAGGATGGTGTCGGA
CAACAAGGATAACGCGGGAGATGTGGGCCAAAGGGAAACGCGGTGCCGAT
CGATCGTGGACACGCTGGGGAAGGCCGGGAAGGTGCTGGGGAAGGTACCA
CAAAACCGCTGCCGTGACAGTGGCGAGACAGGCGCCCTTCGCGAAGATGT
CCGGGACTCCATTGCCGGCATGGTGCAGATCATGCAGTCCTACAGAAGCA
AAAGCATGTTCTCGAGGGTGTTCGTCAGCGACCTCTTCAGGAAAAGACAG
GAGGAAGCGGAGGAGAGCATCAACGCATGCGTTCAGCGGCTGCAGCTTGG
TCTGGGAATCCAGCTGGAGTCAGTGGGGGGAGCGGTTCGAGATAGTCTCG
AGTGTCACCGCCACGCCTCAGAGCAGAAGGCGAGGACTATGAAGAGGAGG
CGTCGACAGAAGCGTTTGGAACAACTTGAAATTCCCACGTCGGAGGTGGA
AATCACGGACGAGGTTCTGGGCAGAGGCGGCTTCGGGAATGTGTACCTGG
CCGATTTGAACGGCCTTAACGCGGCGGCCAAGGTCATCGTGTTCGAAGAC
GACACGTACGAAGACGAAGACGAAGGCGAAGATGATTTTGACGATGCTGA
TGGTGATGGTGGGAGTGATAAAGGACGCCACCAGCACACGGCACTCAAAC
TCGGAACGCCAACAACGGCGGCGGCGGCAGCAGCACCAACCGGCAAGGAC
AGATCGCCCTTAGCACAGTCATCACCACCGCAATCTCGAGAACGCCGCCA
GCTGCGAAGAGCCTTCATGCTCGAACTCGAGGCCATGAAGCGCCTCAAGG
GACCTCACACCGTTGCCATCTACGGGGCCGTCACCAGTCTGCCGGACCGG
CTCGTCCTGGTCATGGAGCTCCTTCCCGGGGGAGATTTGCGCCACCGGCT
GCGGAGGGCAAAAGAGCCCTTGGACGGGAGGGTTTTGAGGCAGATCGTGA
GGGATGTTTGTTGTGGAATGGCGTTTCTGCACGCCAAGGCGACCGTGCAC
GGGGACCTCAAATCGGCTAACGTCTTGTTCAACGGCGCCGGAAGAGCCAA
GATCGCAGATTTTGGCACCTCGCTGTGGACGCAGCACTCCACGCGTCTGT
CGTGCACGATCAAGTCGAGGGAATTTTCCGGCATGAGTCTCCCGTGGTCC
GCTCCGGAGATTTTGAACAGACGCGGCCCCAGCTTCAAGAGTGACGTGTA
CAGCTTCGGCATGGTGGTGTGGGAGTGCCTGGCCCGCAAGACTCCGTGGA
AGGGGGTCGCCGGGGTAGACAACTTACTGCTAGCCGTTGTCGCAGGAGAA
AGGCCACCCGTTCCCGAGAACGCTCCCGTAGATCTCGCGGCGTTGGCGAG
GGCGTGCTGGGCCCACGATCCGGCAGCCCGACCAACTTTCAAGGAGACGT
TGGCCGGTTTCAATCTCAACGCTAACGACTACAGATCTGTCAGCACCATG
ACAAGCAATAAC
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