mRNA_P-littoralis_Contig11.216.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig11.216.1
Unique NamemRNA_P-littoralis_Contig11.216.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig11.216.1 vs. uniprot
Match: D8LI01_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI01_ECTSI)

HSP 1 Score: 536 bits (1382), Expect = 2.400e-181
Identity = 259/314 (82.48%), Postives = 287/314 (91.40%), Query Frame = 3 
Query:  498 WPAPHPSQSYVARARCGQRYEHD--HGGGTRIRAVVSDLDGTLLGPDKLVSATTLEAVRKARSKGVIFVPASGRSKAGMFSCMGELGEDLKKDGSPFLCMNGLTVYGQGDGDGDHGDIIHSELMCPNLATKVVAFWKTHPSAGAAGVSLCGSKGETIVVESLDDRTRSYTDWGEPLPEEVGDWDDAITGGMELNRLYFWGPTRAAVDAFQDDLKRHLKEHPAELTRGVPEMIEVLPHGASKASGLEALLRELGISPEEVIALGDMENDVEMLRAVGHGVAMGQAPLEVRRAARFTAPSNELHGVAVALDTFCDI 1433
            WPAPHPSQ+YVA+ARCGQRYEHD   GG TRIRAVVSDLDGTLLGPDKLVS TTLEAVRKAR+KG+IFVPASGRSK GM S MGELG++L++DGSP +CMNGLTVYGQGDG+GD G+IIHSELMCP LA +VVAFWK HP A AAGVSLCGS+GETIVVE+LD RT S+ DWGEPLP+EVG W +AI GGM LNRLYFWGPTRAAVDAF++DLK HL++HPAELTRGVPEMIEVLPHGASKA GLEALL+ LG+SPEEVIA+GDMENDVEMLR+VGHG+AMGQA LEVRRAARFTAP+NELHGVAVAL+TFC I
Sbjct:  215 WPAPHPSQAYVAKARCGQRYEHDVETGGATRIRAVVSDLDGTLLGPDKLVSPTTLEAVRKARAKGIIFVPASGRSKLGMISVMGELGQELQRDGSPIVCMNGLTVYGQGDGNGDLGEIIHSELMCPELAARVVAFWKAHPLAEAAGVSLCGSEGETIVVETLDPRTSSFPDWGEPLPKEVGSWQEAIAGGMGLNRLYFWGPTRAAVDAFEEDLKEHLQDHPAELTRGVPEMIEVLPHGASKAVGLEALLKTLGVSPEEVIAVGDMENDVEMLRSVGHGIAMGQASLEVRRAARFTAPTNELHGVAVALETFCGI 528
[Close]
BLAST of mRNA_P-littoralis_Contig11.216.1 vs. uniprot
Match: A0A6H5J9Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Y9_9PHAE)

HSP 1 Score: 489 bits (1259), Expect = 1.330e-162
Identity = 253/350 (72.29%), Postives = 281/350 (80.29%), Query Frame = 3 
Query:  492 EEWPAPHPSQSYVARARCGQRYEHD--HGGGTRIRAVVSDLDGTLLGPDKLVSATTLEAVRKARSKGVIFVPASGRSKAGMFSCMGELGEDLKKDGSPFLCMNGLTVYGQGDGDGDHGDIIHSELMCPNLATKVVAFWKTHPSAGAAGVSLCGSKGETIVVESLDDRTRS-------YTDWGEPLPEEVGDWDDAITGGMELNRLYFWGPTRAAVDAFQDDLKRHLKEHPAELTRGVPEMIEVLPHGASKASGLEALLRELGISPEEV---------------------------IALGDMENDVEMLRAVGHGVAMGQAPLEVRRAARFTAPSNELHGVAVALDTFCDI 1433
            E WPAPHPSQ+YVA+ARCGQRYEHD   GG TRIRAVVSDLDGTLLGPDKLVSATT+EAVRKAR+KG+IFVPASGRSK+GM S MGELG++L++DGSPF+CMNGLTVYGQGDG+GD G+IIHSELMC  LA +VVAFWK HP A AAGVSLCGS+GETIVVE+LD RT         +  W      E G W +AI GGM LNRLYFWGPTRAAVDAF++DLK HLK+HPAELTRGVPEMIEVLPHGASKA GLEALL+ LG+SPEEV                           IA+GDMENDVEMLR+VGHG+AMGQA LEVRRAARFTAP+NELHGVAVAL+TFC I
Sbjct:  195 EGWPAPHPSQAYVAKARCGQRYEHDVETGGATRIRAVVSDLDGTLLGPDKLVSATTMEAVRKARAKGIIFVPASGRSKSGMISAMGELGQELQRDGSPFVCMNGLTVYGQGDGNGDLGEIIHSELMCLELAARVVAFWKAHPLAEAAGVSLCGSEGETIVVETLDPRTSRKVLGFELFGFWPCDSLRE-GSWQEAIAGGMGLNRLYFWGPTRAAVDAFEEDLKEHLKDHPAELTRGVPEMIEVLPHGASKAVGLEALLKTLGVSPEEVRGVSETVNWCRFGVGVGGWRGCMRQEVIAVGDMENDVEMLRSVGHGIAMGQASLEVRRAARFTAPTNELHGVAVALETFCGI 543
[Close]
BLAST of mRNA_P-littoralis_Contig11.216.1 vs. uniprot
Match: A0A836C834_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C834_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.410e-48
Identity = 104/284 (36.62%), Postives = 155/284 (54.58%), Query Frame = 3 
Query:  585 IRAVVSDLDGTLLGPDKLVSATTLEAVRKARSKGVIFVPASGRSKAGMFSCMGELGEDLKKDGSPFLCMNGLTVYGQGDGDGDHGDIIHSELMCPNLATKVVAFWKTHPSAGAAGVSLCGSKGETIVVESLDDR-TRSYTDWGEPLPEEVGDWDDAITGGMELNRLYFWGPTRAAVDAFQDDLKRHLKEHPAELTRGVPEMIEVLPHGASKASGLEALLRELGISPEEVIALGDMENDVEMLRAVGHGVAMGQAPLEVRRAARFTAPSNELHGVAVALDTFCDI 1433
            I+AV SD+DGT   PD  V    ++A+      G++F PA+G+S+AGM + +G  G+ LK  G+P + + GL VYG G        +I+  L+  ++  +V  F +         +SL    G+ IV   L+D+   +  D+ EP PE VG+ D+A+  G+ +++L    P    V   Q      L    A L + +P M+EVLP GASK  G+  LL  +G   E ++A+GD END+EML+     VAMG A  EV++ ARF AP+N   G AVAL+T   +
Sbjct:   67 IKAVASDIDGTCTAPDLQVPQRVMDAIVATLDSGIVFFPATGKSRAGMMNTLGPAGDILKARGAPGVYIQGLVVYGPGP----DSKVIYERLLGADIGREVAQFCRDR------NMSLIAYSGDRIVCTRLEDKYVTTIADYHEPFPEAVGEIDEAMAAGLPVHKLIIMAPAEEVVQ--QRPALAQLLGQRASLVQAMPHMLEVLPLGASKGIGVAKLLAHMGFKVENLMAMGDAENDIEMLKMAAVSVAMGNADPEVKKVARFVAPTNAQEGAAVALETLLQL 338
[Close]
BLAST of mRNA_P-littoralis_Contig11.216.1 vs. uniprot
Match: D8LI88_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI88_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 7.420e-46
Identity = 103/279 (36.92%), Postives = 161/279 (57.71%), Query Frame = 3 
Query:  585 IRAVVSDLDGTLLGPDKLVSATTLEAVRKARSKGVIFVPASGRSKAGMFSCMGE-LGEDLKKDGSPFLCMNGLTVYGQGDGDGDHGDIIHSELMCPNLATKVVAFWKTHPSAGAAGVSLCGSKGETIVVESLDDRTRSYTDWGEPLPEEVGDWDDAITGGMELNRLYFWGPTRAAVDAFQDDLKRHLKEHPAELTRGVPEMIEVLPHGASKASGLEALLRELGISPEEVIALGDMENDVEMLRAVGHGVAMGQAPLEVRRAARFTAPSNELHGVAVALD 1418
            + AV SD+DGTL  P+  V+  T +A++   +  + F PA+G+++ GM+  +GE +   LK   +P + + GL VY    G GD  ++++  L+   + ++V +F +        GVSL    G+ IV    D  T     + EP+P  VG   DA+  G+ +++L     ++ A+D  + D++R + +  A  T+ +P+M+EVLP GASK  G++ LL+ LGI P  ++ALGD ENDVEMLR  G GV +G A    R AARF AP+N   G AVA++
Sbjct:   96 VEAVASDVDGTLTTPEVTVTPRTKDAIKAVLNSELAFFPATGKTRTGMYKILGEDIAAHLKTKDTPGVFIQGLVVY---SGAGD--EVLYERLLDVEIVSQVASFCEER------GVSLIAYSGDEIVCSVKDAETDKIALYSEPMPSAVGPLTDAMAAGLRVHKLILMD-SKEAIDRVRPDIERLIGDR-ATFTQALPDMLEVLPAGASKGHGVDVLLKHLGIDPVRLMALGDAENDVEMLRLAGVGVCVGNASPPARAAARFMAPTNANDGSAVAME 361
[Close]
BLAST of mRNA_P-littoralis_Contig11.216.1 vs. uniprot
Match: A0A7S3XQN8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQN8_HETAK)

HSP 1 Score: 176 bits (445), Expect = 1.090e-45
Identity = 106/288 (36.81%), Postives = 159/288 (55.21%), Query Frame = 3 
Query:  573 GGTRIRAVVSDLDGTLLGPDKLVSATTLEAVRKARSKGVIFVPASGRSKAGMFSCMGELGEDLKKDGSPFLCMNGLTVYGQGDGDGDHGDIIHSELMCPNLATKVVAFWKTHPSAGAAGVSLCGSKGETIVVESLDDRTRSYTDWGEPLPEEVGDWDDA-ITGGMELNRLYFWGPTRAAVDAFQDDLKRHLKEHPAELTRGVPEMIEVLPHGASKASGLEALLRELGISPEEVIALGDMENDVEMLRAVGHGVAMGQA--PLEVRRAARFTAPSNELHGVAVALDTFC 1427
            G T I A+ SD+DGTLL   + VS   +E +++AR KG++F PA+G+S+ G+++ +GE G++LKK+  P + + GL VY Q      +G++IH  L+      KVV F          G+SL     + I+    D  T    ++ EP PE +G  D+A +  G   N+L   G     +   +  ++  + E  AE+T+ +  M+E+LP G SK  G+  LL  LG+ P  ++ALGD ENDVEMLR  G GVAMG A   L      R TA +++  GVA A+  +C
Sbjct:   33 GKTIITAIASDIDGTLLNSKQQVSQRNVETIQRARKKGILFFPATGKSRQGVYNALGEFGQELKKENCPGVFLQGLIVYDQ------NGNVIHEMLLPLEPVKKVVQFCTRE------GISLVAYHRDRILCSQRDANTDKLINYCEPTPEAIGPLDEAMVANGQVYNKLIIMGNDEDQITKIRPAMEALIGED-AEITQAIGYMLEILPKGGSKGDGVRRLLGALGVDPAGLLALGDAENDVEMLRLAGTGVAMGNARPALFAATGGRRTA-THDRDGVARAVGHYC 306
[Close]
BLAST of mRNA_P-littoralis_Contig11.216.1 vs. uniprot
Match: A0A1X6NK81_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NK81_PORUM)

HSP 1 Score: 160 bits (406), Expect = 8.590e-40
Identity = 104/288 (36.11%), Postives = 157/288 (54.51%), Query Frame = 3 
Query:  579 TRIRAVVSDLDGTLLGPDKLVSATTLEAVRKARSKGVIFVPASGRSKAGMFSCMGELGEDLKK---DGSPFLCMNGLTVYGQGDGDGDHGDIIHSELMCPNLATKVVAFWKTHPSAGAAGVSLCGSKGETIVVESLDDRTRSYTDWGEPLPEEVGDWDDAITGGMELNRLYFWGPTRAAVDAFQDDLKRHLKEHPAELTRGVPEMIEVLPHGASKASGLEALLREL--GISPEEVIALGDMENDVEMLRAVGHGVAMGQA-PLEVRRAARFTAPSNELHGVAVALDTF 1424
            T IR +  D DGTLL      SAT + AVR A + G++FVPA+G+S+ G  + +G+LG+DL+    +G P + + GL V+G      D G +++   + P LA  +VA       A A   SL    G+ I+ E+ D+ T     + EP+PE VG W+ ++   + LN+  + G +   + A +  ++  +    A +T+ +P+M+EVLP GASK  G+  LL+    G+ P  V+ALGD END+ M R VG  VA+  A P     A   T  +N   GVA A+ TF
Sbjct:   73 TAIRLITCDCDGTLLNAACSTSATNIAAVRAAMAAGILFVPATGKSRYGALAALGDLGDDLRAAYPNGVPGVYLQGLNVFG------DDGSMVYEHTVTPKLARAIVA------EARAVNSSLIAYSGDRILCETADEFTDLLPTYAEPVPEVVGTWE-SVLDTVPLNKFIYLG-SADHITALRPAVEEAVGAE-ATITQALPDMLEVLPPGASKGDGVRRLLKGAFGGVDPAAVMALGDAENDISMFRLVGTSVAVANALPALKIIATAVTERTNVEDGVAEAIHTF 345
[Close]
BLAST of mRNA_P-littoralis_Contig11.216.1 vs. uniprot
Match: A0A2M8NRE9_9CHLR (Uncharacterized protein n=1 Tax=Phototrophicales bacterium TaxID=2364211 RepID=A0A2M8NRE9_9CHLR)

HSP 1 Score: 151 bits (381), Expect = 3.420e-37
Identity = 100/283 (35.34%), Postives = 154/283 (54.42%), Query Frame = 3 
Query:  582 RIRAVVSDLDGTLLGPDKLVSATTLEAVRKARSKGVIFVPASGRSKAGMFSCMGELGEDLKKDGSPFLCMNGLTVYGQGDGDGDHGDIIHSELMCPNLATKVVAFWKTHPSAGAAGVSLCGSKGETIVVESLDDRTRS--YTDWGEPLPEEVGDWDDAITGGMELNRLYFWGPTRAAVDAFQDDLKRHLKEHPAELTRGVPEMIEVLPHGASKASGLEALLRELGISPEEVIALGDMENDVEMLRAVGHGVAMGQAPLEVRRAARFTAPSNELHGVAVALDTF 1424
            +IR V  DLDGTLL P   V+  T +A+R    KG+  + A+G++   +   +   G  +K   +P +C+ GL VY     +GD G I+H +++ P  A +V+ +      A   G       G  I++++ ++      +T + EP+PE VG   + +   + +N++   G  RA V A +  L   +      +  GVP+M+EVLP G SK + L+ALL+EL + P+ V+A+GD END+EML+  G GVAMGQA   V+ AA F   SN   G A AL+ F
Sbjct:    8 QIRLVAIDLDGTLLNPQSEVTERTDKALRAVLDKGITVIFATGKTYTAVAPLVERFG--IK---TPCICVQGLVVY-----NGD-GKIMHQQVLSPAAARQVITY------AEDRGFFALLYSGSRILMKARNEEVEKTLFTRYHEPVPETVGALQNVLDS-VPINKIALVGEPRA-VKALRWQLNAQIGSAVRLMQAGVPQMVEVLPPGTSKGTALKALLKELKVDPDHVLAIGDAENDLEMLQLAGIGVAMGQAEQRVKDAADFVVASNAEDGAAEALERF 271
[Close]
BLAST of mRNA_P-littoralis_Contig11.216.1 vs. uniprot
Match: A0A0G4H592_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H592_9ALVE)

HSP 1 Score: 152 bits (385), Expect = 4.100e-37
Identity = 105/289 (36.33%), Postives = 151/289 (52.25%), Query Frame = 3 
Query:  585 IRAVVSDLDGTLLGPDKLVSATTLEAVRKARSKGVIFVPASGRSKAGMFSCMGELGEDLKKDGS-PFLCMNGLTVYGQGDGDGDHGDIIHSELMCPNLATKVVAFWKTHPSAGAAGVSLCGSKGETIVVESLDDR-TRSYTDWGEPLPEEVGDWDDAITGGMELNR-LYFWGP-TRAAVDAFQDDLKRHLKEHPAELTRGVPEMIEVLPHGASKASGLEALLRELGISPEEVIALGDMENDVEMLRAVGHGVAMGQAPLEVRRAARFTAPSNELHGVAVALDTFCDI*E 1439
            IRA+  D+DGTL+   + VSA  + AV  AR  G     ASGR++ G  + +G  GE LK  G  P +  NGL VYGQ         ++    +  +    V  F +      A G+   G   E I+ + L     R + ++ E LP  VGD  +A   G  +N+ L F  P T AAV    + L   L      + + VP+MIEVLP GASKA G+ ALL+ + I PE+++A+GD END+EM++  G GVA+  A  +++  A+F   SN+  GVA A+  F  + E
Sbjct:   50 IRAIALDMDGTLMSSHQTVSAKNVAAVEWARRNGKFIFIASGRTRTGAMNALGAYGELLKAQGGFPGVYCNGLLVYGQ------RSQVLFERALDTSAVAAVAEFCR------ARGLPFVGYSREEILCDELTAHLARMHNEYKEALPLAVGDVVEAAKEGRVINKMLIFDDPETIAAVRPALESLAPSLG---GRVVQAVPDMIEVLPEGASKAEGIAALLKNVNIDPEDLMAVGDGENDIEMIQLAGVGVAVANAQPKLKAFAKFEVASNDEDGVAEAICRFAQVAE 323
[Close]
BLAST of mRNA_P-littoralis_Contig11.216.1 vs. uniprot
Match: A0A6H5KW38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW38_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 2.720e-36
Identity = 88/241 (36.51%), Postives = 136/241 (56.43%), Query Frame = 3 
Query:  699 PASGRSKAGMFSCMGE-LGEDLKKDGSPFLCMNGLTVYGQGDGDGDHGDIIHSELMCPNLATKVVAFWKTHPSAGAAGVSLCGSKGETIVVESLDDRTRSYTDWGEPLPEEVGDWDDAITGGMELNRLYFWGPTRAAVDAFQDDLKRHLKEHPAELTRGVPEMIEVLPHGASKASGLEALLRELGISPEEVIALGDMENDVEMLRAVGHGVAMGQAPLEVRRAARFTAPSNELHGVAVALD 1418
            P + +++ GM+  +GE +   LK   +P + + GL VY    G GD  ++++  L+   + ++V +F +        GVSL    G+ IV    D  T     + EP+P  VG   DA+  G+ +++L     ++ A+D  + D++R + +  A  T+ +P+M+EVLP GASK  G+  LL+ LGI P  ++ALGD ENDVEMLR  G GV +G A    R AARF AP+N   G AVA++
Sbjct:   16 PRARQTRTGMYKILGEDIAAHLKAKDTPGVFIQGLVVY---SGAGD--EVLYERLLDIEIVSQVASFCEER------GVSLIAYSGDEIVCSEKDAETDKIALYSEPMPSAVGPLTDAMAAGLRVHKLILMD-SKEAIDRVRPDIERLIGDR-ATFTQALPDMLEVLPAGASKGHGVNVLLKHLGIDPVRLMALGDAENDVEMLRLAGVGVCVGNASPPARAAARFMAPTNANDGSAVAME 243
[Close]
BLAST of mRNA_P-littoralis_Contig11.216.1 vs. uniprot
Match: A0A7S2ZAW7_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZAW7_9RHOD)

HSP 1 Score: 145 bits (365), Expect = 1.070e-34
Identity = 97/294 (32.99%), Postives = 150/294 (51.02%), Query Frame = 3 
Query:  564 DHGGGTRIRAVVSDLDGTLLGPDKLVSATTLEAVRKARSKGVIFVPASGRSKAGMFSCMGELGEDLKKD-------GSPFLCMNGLTVYGQGDGDGDHGDIIHSELMCPNLATKVVAFWKTHPSAGAAGVSLCGSKGETIVVESLDDRTRSYTDWGEPLPEEVGDWDDAITGGMELNRLYFWGPTRAAVDAFQDDLKRHLKEHPAELTRGVPEMIEVLPHGASKASGLEALLRELGISPEEVIALGDMENDVEMLRAVGHGVAMGQAPLEVRRAARFTAPSNELHGVAVALDTF 1424
            DHG    I  V  D+DGTLL     V      AV +    GV FV A+G+S+ G  +    +G DL+K          P + + GL VYG        G I+H  L+  ++A K+    + H      GV++     + I+ E  DD TR    + EP PE +G W+D I G + ++++ +  P  A  + F+  L++ + +  A++T+ + +MIEVLP  ASK  G+E  L      P +++A+GD END+EML+   +G+AMG     V+  A      N+  GVAVAL+ +
Sbjct:   28 DHG----IEYVTCDVDGTLLNSKHNVDGAVANAVGRTLENGVKFVCATGKSRQGSLN---SIGPDLEKKIREAYGGEVPGVFLQGLIVYGL------DGKIVHERLLSSDMAQKLADASREH------GVTVVAYSADRILCEEEDDETRKLKPYKEPTPEPIGRWEDVI-GKLPIHKMMYLAPV-ADCERFRPVLEKIVGDE-AKITQAMRDMIEVLPPNASKGYGVERFLESFNADPAKLLAIGDAENDLEMLKLAKYGIAMGNGFDSVKEVADDIVLDNDNAGVAVALEKY 299
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig11.216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI01_ECTSI2.400e-18182.48Haloacid dehalogenase-like hydrolase n=1 Tax=Ectoc... [more]
A0A6H5J9Y9_9PHAE1.330e-16272.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C834_9STRA1.410e-4836.62HAD-like domain-containing protein n=1 Tax=Tribone... [more]
D8LI88_ECTSI7.420e-4636.92Haloacid dehalogenase-like hydrolase n=1 Tax=Ectoc... [more]
A0A7S3XQN8_HETAK1.090e-4536.81Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1X6NK81_PORUM8.590e-4036.11Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2M8NRE9_9CHLR3.420e-3735.34Uncharacterized protein n=1 Tax=Phototrophicales b... [more]
A0A0G4H592_9ALVE4.100e-3736.33Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A6H5KW38_9PHAE2.720e-3636.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2ZAW7_9RHOD1.070e-3432.99Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig11contigP-littoralis_Contig11:1096337..1112091 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LI01
PFAMsHydrolase_3
Model size2202
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorychloroplast
GOsGO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0044237
Exons8
Evalue6.29e-187
EggNOG OGsCOG0319@1|root,2QUN8@2759|Eukaryota
Descriptionphosphatase activity
Cds size1290
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig11.216.1prot_P-littoralis_Contig11.216.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig11 1096483..1111325 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789431.8563526-UTR-P-littoralis_Contig11:1096336..10964821680789431.8563526-UTR-P-littoralis_Contig11:1096336..1096482Pylaiella littoralis U1_48UTRP-littoralis_Contig11 1096337..1096482 +
1680789431.9673362-UTR-P-littoralis_Contig11:1111325..11120911680789431.9673362-UTR-P-littoralis_Contig11:1111325..1112091Pylaiella littoralis U1_48UTRP-littoralis_Contig11 1111326..1112091 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789431.8659732-CDS-P-littoralis_Contig11:1096482..10966451680789431.8659732-CDS-P-littoralis_Contig11:1096482..1096645Pylaiella littoralis U1_48CDSP-littoralis_Contig11 1096483..1096645 +
1680789431.877803-CDS-P-littoralis_Contig11:1106402..11067691680789431.877803-CDS-P-littoralis_Contig11:1106402..1106769Pylaiella littoralis U1_48CDSP-littoralis_Contig11 1106403..1106769 +
1680789431.889668-CDS-P-littoralis_Contig11:1107252..11073791680789431.889668-CDS-P-littoralis_Contig11:1107252..1107379Pylaiella littoralis U1_48CDSP-littoralis_Contig11 1107253..1107379 +
1680789431.900601-CDS-P-littoralis_Contig11:1107800..11079911680789431.900601-CDS-P-littoralis_Contig11:1107800..1107991Pylaiella littoralis U1_48CDSP-littoralis_Contig11 1107801..1107991 +
1680789431.9187143-CDS-P-littoralis_Contig11:1109002..11090361680789431.9187143-CDS-P-littoralis_Contig11:1109002..1109036Pylaiella littoralis U1_48CDSP-littoralis_Contig11 1109003..1109036 +
1680789431.9317167-CDS-P-littoralis_Contig11:1109894..11099651680789431.9317167-CDS-P-littoralis_Contig11:1109894..1109965Pylaiella littoralis U1_48CDSP-littoralis_Contig11 1109895..1109965 +
1680789431.9415517-CDS-P-littoralis_Contig11:1110354..11105201680789431.9415517-CDS-P-littoralis_Contig11:1110354..1110520Pylaiella littoralis U1_48CDSP-littoralis_Contig11 1110355..1110520 +
1680789431.954763-CDS-P-littoralis_Contig11:1111154..11113251680789431.954763-CDS-P-littoralis_Contig11:1111154..1111325Pylaiella littoralis U1_48CDSP-littoralis_Contig11 1111155..1111325 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig11.216.1

>prot_P-littoralis_Contig11.216.1 ID=prot_P-littoralis_Contig11.216.1|Name=mRNA_P-littoralis_Contig11.216.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=430bp
MRALVYLVVIYFATAAAAAPAAPAAGRNMRRAFAISSSTRGSSSRCSFLF
ASRLAPAGFAASISTTPSGLLSSSSPSSPLSVRRGSSSSSGANLLSADDT
NDKDSGSINTSKAMKEEWPAPHPSQSYVARARCGQRYEHDHGGGTRIRAV
VSDLDGTLLGPDKLVSATTLEAVRKARSKGVIFVPASGRSKAGMFSCMGE
LGEDLKKDGSPFLCMNGLTVYGQGDGDGDHGDIIHSELMCPNLATKVVAF
WKTHPSAGAAGVSLCGSKGETIVVESLDDRTRSYTDWGEPLPEEVGDWDD
AITGGMELNRLYFWGPTRAAVDAFQDDLKRHLKEHPAELTRGVPEMIEVL
PHGASKASGLEALLRELGISPEEVIALGDMENDVEMLRAVGHGVAMGQAP
LEVRRAARFTAPSNELHGVAVALDTFCDI*
back to top

mRNA from alignment at P-littoralis_Contig11:1096337..1112091+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig11.216.1 ID=mRNA_P-littoralis_Contig11.216.1|Name=mRNA_P-littoralis_Contig11.216.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=15755bp|location=Sequence derived from alignment at P-littoralis_Contig11:1096337..1112091+ (Pylaiella littoralis U1_48)
GTTACTCCTGTCTGTCTCGTAGCTTGTCCATCTCCACTACATGTCATTCT
ATCCTTCGTCCATCTCTCTCTCCCTCTCTCTCTCTCTCCCTCTCCTGTAT
TCGACGCCCTTGTTCGTGTGCTTTTGTTATCGGAACCGTGTGGTTCATGA
GAGCTTTGGTGTATCTCGTGGTTATCTATTTCGCCACCGCCGCCGCAGCA
GCACCAGCAGCACCAGCAGCTGGACGGAACATGAGACGTGCCTTTGCGAT
CAGTAGCAGCACCAGAGGCAGCAGCAGCCGGTGCAGCTTCCTCTTCGCCA
GTAGGTTAGGTGAGAGCTATCACCCAGTTCGCCCTACCCACTTTTCTTTT
TGCTACCGCCACTCGTCCGTCTGCTTGGTCATCCTCAATCTGCTGCCTTT
GTCGTCGGAAAACGAGTCGTATCAAATGTATGATACATGCATAGATCTGT
ACCTCTCGTCTGTCGGTGTTTTGTGAAGTAAGGAGCCGGATTAGAGCGAC
GCCTTCAATAGCGATATGCCCTGGATCCTGAATAGCGACACCCACCCCAA
GCGCTTGGCACCAATGCATGCCGATTTAGCGACGGTACCGTCGCTTTAGC
GGACTCATCACGACATAGCGACGTTTTTTGTCAATACAGCGACGATACGT
CGCTACGCTATGATACTTGTATTATACCCCGTATTTACCGCGCTCGTCGA
GCTCCGCCTGCTGTACTGCTGTACACGCACACAACCAGACACCCACACCG
AGTTGACTCCACCAACCACTTCCTCACATGATGTCATGCGCGGATGGAGA
GTCGTGCAAACTCAAAAACGTGAAGCTGCCTGAGACTCGGAAGAGATGGG
GTGAACACCCAAACACGAAGACAAGCTGCTGAAAATTTCATGACAACAAC
CCTACAACAGCACTAGTACTACCGTAGCTGGAACGGCTTCGTCTACGTAC
CGCTCTGTAGGAGGCATGACACGATAATACGAGAGAGACACGACCCTGTC
AACATTAATTTGTGAGAAGAACTGCTGGTATTCATCTCGTATGTGGCTTT
CATTCCTCAGTAGCGACATACTATCGCCACTTAGGAATAGCGGTACCATC
GCTATTGGAGAATAGCGACATATGTCGCTATTGAGCAATAGCGACACCCC
CCTGAATGGCGACACATTCTCCTTCCCGCACTACCCGTCGCTGTATCGGG
CCCCCTACGGTATCATACGATATGATACTGCTGTATGCGACTACCTGGTG
CTCGAATCATACATACGATACAAGGGGGCTCTCGAGGGCGCCGGCTCGTC
GTCGGTTATGTGGTCGGATACGCATGGGGAGGTGGTGGCATGGAGTTGAT
ATGAAAGGTGGGGCTTGATATCATGCCAAGGGATCGAGGGAGGAAAGTCC
GGGCAGTCAAGGTCGGTCAGTCAGGTCGCCGACCACCTTGAAAGGGGAAG
ATGAAGTGCTGGCCCGTAGACGCCGCGCTCAATTTGTGTTTAGCGGCGAA
AGTCGGTTGCGATTGCCGACATGATGGCTTGTTGTGGAGGTGGAGTTGTT
GTGCTGTGAAGAAGGTGTGCGGGTTGGGGAAGAAGTAGATAGAGACATCC
CTTCTTGTTGGAAATATGAGAAACTATCAGGAAGGCAGGTGACGAAAATT
CACAGCTAGCCGCCGTAGGCAGCAAAAGCTATCTCGTGCTCCATTGATTA
TCCATGTACCAGGTATGTTAGAACATGATGAGTTGTTTCCCTTTTTTTGG
GAAGATACATCGGAAAAAATAAAAATTGGGAAGATACATCGGAAAAAATA
AAAATTGGGAAGATACATCGGAAAAAATAAAAATTGGGAAGATACATCGG
AAAAAATAAAAATTGGGAAGATACATCGGAAAAAATAAAAAGGACGATTG
ATGCTGTGGCAGCTGTCCCTTGGTGAGGGAGTTCGACCGCGTAGGTAGGC
AGTAACCTGCCCCTTGTGCTCCGTTGATGAACCATGCAGCATGTATGTTC
GAACTTGAGCTGTCTCCCATCTTTGGAGACATGTAGGGACACATGAAAAG
GTCGATGGATGCTGTACCAGGTATGCAGCAGTGGACGGATATGTTCCAGC
GCATCGAACGAGCTGCATGTATTGTATAAGAACCCTCGGCAAACATTATG
CATAGCCAATAGCTGCAAAGAGGGTACTTCGAAGTAGAAAGCATGCAGCA
ATTGATGTCGAATGCAAAATCTTGAACAACATCCAGCAATCAATGAATCT
CGAACGCGAAACCTCGATCGCTCGAATTGCTACTGCTGCTGTTGCGGGGG
AAGCTTTCCGATGCTTCCGCTTGCTGTGAATACACGAAACTGCACGACGA
AGTATGAATCTGTTGCTGCATGCAGTAGTCTCTGACAAACTGGCTGGCTC
TAAAGTTGAAAAAGTCTTACCGTAGGTAGCAAGCCGTCGCTTCTGATCGT
TGGATATGAGAACTTGCACCTGTCCAAACTACTTAGTAGTGTAGCTGATG
TTGTATAGGTAGGTGAACAAGGATACACAGGGAAGTCAACTCCACCTTTT
TCCGAAAGGAAGCGGCAGTACGAACAAAACATATCGCGCTCAGCAGAAGA
CATACATACTGCATCATTTGTATACATTCATCCTATTTTTCGACGACAGG
CTGGCAACAATCTCTATTCCCACGGAGGGAAATTCTGCCAGGATGCAGAT
CGTACTCGAGAGCAATTCAGTCATTAAACAGAGTATTACATAGAGTATTC
ACAGCATCATACTCGAAGTATGTTACACTCATCCAACGATGCGCTGGCAG
CAATATTTTTTTCCCATACGTCAGATAATTCCGCCAGCCGCAGCATGTAC
TTCGTATTCGAGAGCCCTTCAATGATCATACTTCGAAGTATTCATTACTG
AATAAATTGTCAACAGATAAATTGCACTTCGAAGTACCTACAGCAGCAAA
CTCACACACAGCAGGGAGCACGAGTTTTGCCCAACGTGCAGCTCAGCGGC
GGCAGCAGTGGATCCAAATTTTGCCGCCATATGATTTACCTCCTTCCACA
CCCACAAACACACCCACTCACACACCCACACACACCACACACGCATCACA
CCTGTTATTATGAATTATCAACAGACATGTTGCACATACGTAAGTTAGCA
AGTCCACACACATACAGTAGTAGCAGCAGTGGACACAGTAGTAGGTAAAG
TCTCAACAGACATACTGCATGATTGTATACATATTCATCAACGACGCGCT
GGCAACCATCTCTTTTCCCACGTCAGAAAACTCCGCCAGCATGTATGTGT
TACTCTCCGAGCAGCCGCAGTATTCGAGATCTCTTCAATACAAACACAGG
TACTTTACGTATACATAAAGCAGCAAACGCACACACACAGCAGCAGTGGA
CATGATAGTTTTGCCGAACGTACAGCACAGCAGCTGTGGACCAGAGTCTT
GCCGTCATGTGATGAACGGATCTCCGTAACTTGTTTTTCGAAGTACACAT
TGTAGACAGAGTCCACACACACGTATTCGAGAGCCCTACACTATCTACCT
GTACGAAGCACGTACACATATTATGTACAGTAGTCTCAACATACATGACA
TACGTAATATGTAATATGTATGGTAGTACCTAAAGCAGCAAATCCACACA
CCACGCTCAGCAGCAGCAGTGGACATAAATTTTGCCATGCAGCAGTTTTG
CCGCAGCAGCATGCAGCACACACAGCAGCAGCAGCAGTGGACATGCATTT
TGCTTAACGTGTACCAGGTACATATTTATATCATGCTGTAGCACGGCAAG
CAGCATCTGTAGCACGGCAAGCAGCACCTCCTTCACACACACAAATATGA
TACACACGCGTTCACACGGAAGGTGATGTATCTCCTTCACACATACAGAG
GTATACTGTATTGCAGTTTTACACAGCATGCAGCACAGAGCAGCAAGCAG
TGGACATGAGTTTGCTCAACGTGTAGCACGGCAGCATCTCCTTCACACAG
GTACACAACAACACACACGCACACGTAGAAGGAAGCAGACGTAGAAGGAA
GCAGACGGAAAAGGCTTCGTGGTGGGCTGATCCCAGCTAACAGACGGGGA
CTGTAGGTCGAAACAAATTCGACGTCGGATTCGACAAATGTCGCCAGGGA
CTGTAGAGCAAAGCAATCAAAACAAAATCGACCGGTGATTGGCCAAGGCA
ACGATCGTCAGCAGAACAGCATCCGCGGGAGGTAAAACTGCGGCGCAACC
ACCGCCCCGGGGCGGCGGTGCGGCGGCCGCAGCTCGAGACACACGGCACG
CCAGACTGCGAAATTCAGCAGGACAGCAGCAGGGATGAAGCGCCCGCCTC
AGGCGGAGATTCGGAAAAACAAAAAAAAGCGGCTCTAGGCGCACGAGTGA
GCAGCAAGGTCGAACCGGCAGGAACGAAGTCAATAGGGCGATCTACGAAG
TAAAATCAATGTAAATACTTCGTATATGGAATAGGATGTTGATGCCGGTA
CTGCTGTACTGCTGTAGGTCAAGAAACGAACGCGCGGTGTCAGTCATCCA
TTGCTGTGTGTGTGTTGTGTGTTTCGAATACTTGTCAGACAGCGTACAAG
AGCTTGCAGCTCCCCTCTGAGGTTCTCGGGCTCCACACCTCCACATTACG
TGTTTCAAAATTTGGGTACACCGAAAAATGAAGGTGTTCGCGATTATGAT
ACTTGTAGAGGTAAGCTTTATGTCTCTCAAATCCCGTCGCTTTACAATGT
ACCTGGTATTCAGCAGTATGAGAGTGCAAATATGAAGCAGGTCCGCCGTT
TGAGCCATAGCCGAAGGTAGGTTGTAGATTGAGCATCAGATTGGAGCATC
TGAGCATTTGATGATCTGAACCTCTCTTTCTTTTGGTGTAGTTTGGTCTA
CTCGATGCGGAGAGATTGCTGCAGTGCTGCCCACCCGCCATGCACGAAGC
CGGGTTGTAAAATACAGCACCGAATGCGCCAACAACACACTGAGAGATAC
GCTAGCGAGCGCTTCCTGCCAACATGATATGTCGTAACATCATGGTAGGT
AAATGGACATCCGCATTTGTATACACACCATCCTGGTAGAGCAGCAGCAG
TACAGGGACCAGCAACATCAGACAGGGGGTGGAGGATGCGCTACCATACA
GAATGTGCCAGCGAAGGACACATGAACAACCCTACGAAGAGCACACATGG
GTATGATACGCCGGCGAGCACTTCCCACCACGTATGCCGCAACGTCAACC
ATATTCTTCTTAGATAACTTCGTGTGGGCAGGGGGAACAGCAGACGGAAG
CAGCCGTGGGCGTCCCTACTCGTAGAGAGACCGGAGGCCTTTGCCTCCAG
GGGCTTGAAAAGTGCAGACTACAGAAATACCCTTACCTTCAAGCAAGGAA
AGTTGAGTGGACAGCATGGTTCGTCCCGAAAAACGGCGGCAGATGGCAAC
GCAGATGTCGGTAACGAGCTAGCGACCGGGCGACCCTCCTACTACATCAT
ACTTCGAAGTACAAACCAAAATGAATCCAGCCTATCGCGGGCTTTTGTCG
CGGCCACTTGGTGTGTTTTGCTTCGCGTTGTGGCTGGTGTGATGGTGCAC
TTCGAAAGCGGATATGCACTCTGATTGCAGCGAGGCTGCGTGTGTTCGCT
GTGTGAATGAACGGAAAGGAACCTTTCTCGCCTGACAATAAAAAAAGAAG
CAGGCTACCAGACTAAAGGAACAGAAGGGCCAATCCGACGCTGGGCGGGA
GCCGTCCCCGGTATCCCGGGGCTCCGTGATTGGTGTTTTGGCTCCTACGG
TATCATTCATGTTTTTCCCACATGTTAACTTGTGGATCAAAACCCTTGGT
ATTGCCCCCCCTGACTGCTGCACGCTCCATATTCCACCCTCGCTCGTCTG
AGGCTTACGAGACACAAAACCTCTTTTGCCGAGGTATTGCGTTCACAGCA
GGTCGAGCCCTCTACCGATATCTTTTTAACAATTTCTCAGTAGAGGCCTC
GAAGCGCGAGATCTAGATGCTCAAAATTCACGTCTTGGGCACCATCTTTC
CGCGTGTCAAGCTGGCGCAAAGAAACGCGGATTCGCTCAGACAACTACGC
TTTCGTCACGGACAGTGCAAGCTCCGTCACAAGGAATAATGCCACGCGAA
ATTACCACATCTTACCAATTTCTTGTGTGAAGTGGCGTCCCATGCCTCGA
TAGCAGTAGCGGGCAGCCAGAAACGATTCCAGAGTTATTATTTTTGACCT
TGTAAATTTGTGTGTACGTGCATGCCCGGAAACTGCACCAAACTGGGAGA
TCTGCCGTGTACGTTTGCGCGACGCCGCCGTTCTCCGCATGGGTATCCTC
GATTATCGAACGGATGAAGCGAAAATGTAGCTGTTTTTTACTGGGCGATT
TCAAACGGGTTTCCAGGCTTTTAACCCCTGCGGAATGCCACTTGCGATCG
ATATACGGCCCAAGAAGCCAACGGGTCGTAGAAACCCCGTTTTTCCGGGT
GATTTTCAGCCCCCTCGTAACTCTGCTGCAAAATTTTCACTCTTTGCTCC
ATTTTTTTTTTTTTTGGCGGAAGGCGTTTCCTGTACAAGACTTTTTTGTT
GTTTATACCGAACCCAGCGTGGCCTCAACTCTATTTCCACGTGTTACGTT
TTTGGTGGCAAGCGTGGAGCTACGAGAGGGGAAGGTGGCACCCATTTTCC
TGCTCCTCTTGCAGTTGTTGTGATCCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTACTGCCGCCTTTAGGTTGCAACCACGCACATTTGCATATTTCTCGA
CGAAAAACACACGAACTGCGCAACAAGCTGCACCACTGCAGAGCTACCTA
GCTTCGTGCTTCGCAGGGAATGACGAAGGTTCGGAGCCGCGAGGTGTTAA
GTGCCAGGCACAACCATGTGAAATCCCACAAAAAATATAGGCACACACAA
ACGGCCTTTTCTCCCATCTATCATATGCCATCGCCGGGCATGCATGCAAC
ATAGGTCAATCACGTTTTTAATGTTCTCTCGGCGAAATATGGACGTGGTT
CCCTGCTGGCTCAACCAATGGAGCGTGGGTTATTTCCTGTAAGGAAAGTT
CAAGGCTTGGGCCCATGCGCTGTCAACCGCCACGCGAAATGTCTTCAAGA
CCAACACACACAGACACACACACACACACACCGATTTCCTCCTGTCAGCC
AGACCACCACCGGAGCATTACTTTCGACACACAGTCAATAGCGCCCAAAT
TAGCGAGTCTCCCGCCGAAACAGGGACGATGTTCGCTGCTGACTACGCCC
CTTGAGCGGCGGACTTAAACGTTCTTCGAGAATGCCAATAGTTCTTTTGG
GGAGTGCGGAGTCAAGCGCCGACCGACAACCGTTTACAACCAGCCAAACA
AAATCGCACCGGCGCTGCGTGTGTGCGTGTTAGGGCTTGCGCCCAAGTCG
AAAAATTGGAACCGGGTGGTCCGGAGGGGCTGCTCGGTTCCGGGTACCCG
AGGTCGGGTACCCGGGTAGGAGCAAGTCGGGCGCGATACTAAGGGTCGCA
CTTGACTCGAAAAATTGGAACCGGGTGGTACCCGGTGGGGCTACTCGTTT
CCGGGTACCCGAGGTCGGGTACCCGGGTAGGAGGAAGTCGGGTGCGAGCC
CTAGTGCGTGTCATTTGCTTCGGGTCGCCCCCCTCTCCTGTCGACAGACC
GGTTGGATCTGACCAATTGGCGAGCCTTCGCGGACATACTGACCACACAC
TGACCACCCAAATGCATTTGGTCGCGTGCGGTGTGGGACAGATGGTCGTT
TGGAGGTTTAAAACGTTACTCCAAGTGTGTACATAAAAGTCGTCGTGTTT
GACCTGGATTTTTATCCGAATACCGTCGGTAATTGTGGCGCCGAGCTGGT
GGTTTTACGACTTGCGACTTCCTTCATCATGAGCACTTTTTTTTTTTTTC
CAATCTGCTGGGTAGCTTATACCTGGTATATTTATATTTGAGGCTGTTTC
TTACGCAGCCGTTTTTTCCTGTCGGAATTGGCCCATTTTCGATCCAGAGC
AAGAAAACGTTTCTGAGCTGCACGCAGTCGAAAACGGCCCACTTACGATC
TGAGATTTCTGACAGCAGGTTCCCGATCAGAATCCTGTCGGAAATCCCAG
ATTTCGCCCGGCGACCGGTCGGTGTTTGCGACCGAAAGTGTTGTGCTTGG
ATTTTCTAAGTGTGCGTGGTTGTGTCACGAATAAATACAACACACAGACG
AATCAAGCCGTAACCAGCCCATTCAAGCTGATCAGCAGTGGCAGCGGCAG
CAGCAACGGCAGCAGCAGGAGCAGGAGCAGAGGCGGCAGTCGCGTACAAT
AACTAGAATGTGAAGCAGCCGGTAGACCATTTACACATTTTGCGATGTCG
CCGGCTTGCAACTTCGTTCACCACTCTCGAATAGATGGACCCACAGCATT
GGCTAAGGCATCTGCTGTGAGCTGCGAGTGTGGTACTTCTCGTGTGGTGG
TCGCTTCGGGCGGTAAGGCAGCGGTGTGTGTTTTGTCATCCCATTTATTC
TAGGCAGCAGTCTACACCCTTCGGTATGATATGGGTGCTTCAGCCGGGGT
CACACAGGGGGAAGGTCAACACGAGCTTTTTCATTTTTTATTTTGTTTTA
TTGCCCTCACCTTCCTCTTGCGGTACGTGCCTTCGATTATGATGGGAGTC
GGGTGCAGCAATCCCTTCCCTCTGCTTACTCACGAGTAGTTCGCTTTCCA
CTGTAAAGTCGCAATGAACGCTCTGATTGAGAATCGAACCTACGACCTTA
CAACCATTAGGTTAACGAGGGGACCACTAGACCACCGGGGAGACCGGTGC
CTAGGCTCGTTAAAAATGAACTTTTGCTCGTAGCGATAACATGCTGTGAA
AAGAGAGAGAGGGGGAAAGAACGGTACAGCAGCACAGATCGGTACGTCTT
TCTTCTATCTCTTCACATGTGATTACCATGAGAAACTGTTCTTTGAGAAC
GCACCAATGGAACCCTAACCCAAACGATCGCAACACGAGAATGGCCGTAC
ACACATCTCGCGGAAAATGCCTTTGTGATTTCTATGAGCCCATCCGTTTG
AGAGTGGTGAACGATAGACCAAACACAATCTGGCTCTTTATTTTTTGCTC
TTAAAAATAATAGCTTCTCGGCTCCTTGTACATACTGTCTTTTAAACAAT
GTCTAGAACAGATGTTCGATACACAGCACTGCTGATCCCTCTTCAATTGA
TCACCCCGTCACCAACTGAACGCCCTGCCGACGGCACCGACGGCAAGAGG
TGAACGGGGATCCCCATCCTTCCAGGTTTTGCTTGAAACGATCGATCGAG
CGAGCTATTGAGTATTGATTCCTCGGGTGTCTGTTGACAGAACCCCTGTT
TTGCACTTGGGGCATCAAGACAATCTTTTGGCGCCTCCTGCTTCGAGCTT
GAGTGGTCAATTTTTTTTTCGAGCGCCTGAACAGCGACCGTCACCGGCCA
CTGGCTAGGTTGGAAAGGCAGTGCACCCAGTGCTGCTCGGAGCTCCTTCA
CGAGCGCGCCACGCTCGGTTATTCTTGCTCAATTTGTAACTGTGTCTCAC
CAAAGTGTGATGAGACAGGCCTCACCTCCATGTTCCACATCACTGAGATC
AAGATGCCTAACTGGAGTGCGCAATAAATGCGCGGCCGAAGAAAAAAAAT
GATGTTGGCGAGTAGCGAACATGGTATCTCACGAGCATTCAAACGATATC
CAGATCAACACCTTGGCTTCCATCAATGAACAACGGCCTGCGAGCAAAGA
AAACGGTCAGGTTTGTTGTTCTCGCTACTCTGTGTGAACAATAAATACAG
GCAATCAACGAAGTGCGTGGAGAACGTGTCGGGCGCGTTTCTCCTCAAGA
AAGAAGACCCGATTTCCTTGCCCTTGTCGCTGATTATCACCGAAAAGCAC
CAGCAGGATTTGCCGGGTCGCGTGTTTTGTTTCCGTCAACAACAACAGCA
ACCAACCTACGACAATAACGAAGACCGATTTTTCTTTCCTCACTACGCGC
CGATTGTCACCGAAAGCACCAGCAGGCTTTGCCGCGTCAATCTCCACCAC
CCCCTCGGGTCTCCTCTCGTCGTCGTCACCATCTTCTCCTCTTTCTGTGC
GGCGCGGAAGCAGCAGTAGCAGCGGTGCAAATCTCTTGAGCGCCGACGAT
ACCAACGACAAAGACAGCGGCAGCATCAACACCAGCAAGGCAATGAAAGA
AGAGTGGCCGGCCCCACACCCCAGCCAGTCGTACGTCGCCAGAGCGAGGT
GCGGACAACGGTACGAGCACGACCATGGCGGTGGTACGAGGATTAGGGCT
GTGGTGTCCGACCTGGATGGGACATTGCTGGGGCCGGACAAGCTCGTGTC
TGCCACAACGCTCGAGGCTGTTCGAAAGGCGAGGTGTGATCTGCTGCTCC
TGCAGTGGTTGGGAACTGGGGTTTAGTGGTTGTTGTTGTTAGCAATGGTA
GTAGCGGCGGTTGTGGTAGTGGTGGTGTCGGCGTTGTTGTCAAACATGAT
AGTTTCTTCTGTATTGTCCGACGCTCAACACACAAGCGACCCCTCGGAGA
GCAGGGCAGATCTGCGGCCGGTATTATCGTTTTTACGGTGTATTCGGGGT
CCTTCGTTGACGCGGTACCCGTGTTACTATTCCCGGACGTTGTCGTGCAT
TTTAACACCAAGCGTTCGACCAGCAAGCGTTTCCACTGTGGCTGGCACCC
GTCAAAGTTGGCGTGAGGTCGTAGAGCTTCGCAAGTTTTTGGGTTCATAG
ATAAAAGTGTCTTGTTGCCCTCCCGTCTCTTTCTCCTTTTGACAGAGATT
TTGCGCGATTCCGAACCGACGTTTGATGAGTTTCCAATATGTTGTATGGC
GTGTTTTTTCACACAGGTCTAAGGGGGTTATATTCGTGCCGGCCAGCGGG
CGGAGCAAAGCGGGCATGTTTTCCTGCATGGGGGAATTGGGGGAGGACCT
CAAGAAAGATGGCTCTCCGTTCTTGTGTATGAATGGCTTGACGGTGAGCA
CAGCTTTTTTTTCGGGTGTTCCTGGGGCTCAGCACTTTCGTGGCCATGGG
CTAGATTTGGGCGGTGAGCTATGCGAGAAGCAGCAACAATAGCATAAACA
GCATTCATATTTCATATGCTTTTCAAATTACTTCTCACGAAGTACATGAC
AACCAGCAACTTGCAACAATGAAAAACAGACCGACCAACCAACAACCACA
ACGAGATAGATGAGAACATCGCCGCTCACAAGGCCAACGGCATCAACGAA
CAGCAACAACACAACAGACAACAACAACAACATAACAACAACAGCAACAA
CAACAACAACAGCAGCAACAACGACAGCAACAACAACAACAACATCAACA
GCAAACCTCGGCCTCATTCATCGTGAAACGAACGACAGCCCATTGCGATT
TGATACAACACAAGGTGTACGGCCAGGGCGATGGAGACGGTGACCACGGC
GACATCATCCACAGCGAACTCATGTGTCCAAACCTGGCGACCAAGGTGGT
CGCCTTCTGGAAGACCCACCCCTCCGCGGGGGCGGCAGGGGTGTCGCTGT
GCGGAAGCAAGGGGGAGACCATCGTGGTCGAGAGCCTGGATGACCGAACA
CGAAGGTGGGGAAAGGAAGGGAGGGAGGGAGGGTGCACCGGACGATTGTA
TGGGTGTGCACGTGGTGTAAATCGTACGTGTCGGCCAATTTGTCGGAATA
TTTTTTTTTCAGGAACTGTATGTCATGCCTCACCAGTGATCCGAGGCCAG
GGGCAGGTGAACCAAAAGCAGGGGCTCTTGGCTTACGATGTCTCACGGGC
GAGTTCAGGGGGCGTTGGCGCGGGCGGAGCTTGGATTTCTGTATTTTATC
CGCGACTCCGACCACTTCGGTCTCACGGTGGCATGGAGCTGGAGGACACA
CATTCGAAAGAGCGAAACAAGTTTATTGCCAGCTCTCATAATGAATGAGG
AACGTCGGCTTCACCCAGGACGAGGGGTGGCCGGAAAGGCGTTCCCGCGA
TGCCTGAGAGCCTGGGCGCTCTCGCAAAACGGCAGATGCAGGGTGACGAA
TGGTACAACTAAGTGCCAACCGTTACAATTTGTTTTTATAACGCGTCTTG
AAATCCCAGTCATCGCATCATTTTTGAACGCCAAACTCTACACATTCCAT
CATTTTTGTACGCCAAGTCTACGCCTTCCGTTATTTGTGGACGCATCGAC
TGGCGTTGGTCGTACGGTAGGAAGGTCACCAGAGGTACGTGGTGTATGTT
CCGCTTTCAGTCGAGGCACTCAGCCTAGAGACGTTGTTACTCTTGAGGTT
GAGCGGGAGGTCTTTTTTATTTCTGTCCCTTTTTGAGGGGGTTTCGTGCA
TCACCACCTTGTGTGTGGATATGTACGCGGCATCGTGCGACCCCCGTGCG
TGCTTTGCACAACCCACAGATGACCTCATTGTGGGAAAGGGTACTGCTGT
ATTATATTGTTTTATCTATTTTGCCCTCCTCACCATGCAACCGATGAACG
AGATCACATGGTAAGAGTTGCTGTTTCGACTGTGACTGCCGCCCCGTGTT
TTTTACCCCCCCCCCTCTGTGTCCATCACGAACCGCGTTACCCCCCTTTT
GTCGCCCGGTGGACAGCTACACGGACTGGGGAGAGCCCCTGCCCGAGGAG
GTGAGGCTGACCTAACCCTTCACCCTGACCCTCAATGTGCCGTATACCAG
GTACAAAGCAGTGCGGTAGATCTTTTGCATCAGATCTCCGTCCAGGCGGC
GAGTTGTTTCGTTGCTTTCCGCGGTTACACTTTGCCCGCGGTTACACTTT
TGCTCGCGTTTGTTTTTATAACAAAAAATGCAAAGATCGAAGTATTTTTC
GAAAAACTCCTGCATTTACTGAAAACGTGACTTCAAATGATTTGATTGAT
TGCCATATTTGTTGTAGCTGGCGCCCCCGTCCAGATGGAAATATTGATTC
TTGTCCTGAGATTATATTGATTCTATTCCTGCGATTACGTTGGGTGAGTT
CGAACCCCGTGGTTGTGAAGCGGGAAACCCTCTTATCGCGCGCCTCCTCT
CTTCAGCTTTCACATTTTCTTTGATCCACAGCAATGGGATAATCGTCATC
GCGCGCTCCAAAACCAAATGGAACCTCGGCAAAAGTTGGAACCAGCCGGG
GTCATCGATACACTCCCTTTTCGACTGGACTGTTCCAAATCTCCAGGCAG
CGCAAATCGACTCTCGACTTTTTGAATGTGGCAACCTTTCGAAAAAGTAG
GAATAATGTTTCGAAGCTCCTTTGTATGATACGCACGGGAATCTGTTGTT
GACGATAACCCTTAGCACCAAAGCGATAGGCACGACGCGCACGGCGTCGT
CAAAAATTATACTCCGGAGTACTTTGGTGAGTGGGTCGGGGCCTGCGGGT
TTCGAGTTTACATAATTCAACACGGAGGCTGGCTGACGTGTTGCCCCTCC
CCGCCCACGCACTACCGACACGCCTCCTCAATGTCACCGTCTACCCAAAT
GTTTGAAGGTGGGCGACTGGGACGATGCCATCACGGGCGGGATGGAGCTG
AACCGCCTGTACTTCTGGGGGCCTACCCGGTGAGAATTGTGATCCCTTCA
TGTCTACTTGAAAAACCTCCTTGCCCGCATGAGTGGTTCATTTTTATGGG
GGAGCAATCTGACGTGTTTGTGAGCAACCCGAAAGTCCTGACCGTGTGCG
TGTGTGCGTGATGCATTTCCCACCGTCCAAGGCTTCGACTTGTCGTTTTT
TTTTTTCTGATCTGGCATGCAATCCTGATAACGCTGGGTGTGGGTTGTTC
TGTTGACTCCAATCTGCGGATCCTCGGCACACGGCTTCTCCGCGTATTTT
CTGCCTCCCTCTTGTCGTCTCTCCCTCTCCCTCCCCCCCTCTCTCTCTCT
GTTCTGTCTCTCTTTCCCCACCTCTCCCCCTCTCTACCGATCCCTCCCTC
TCCTGTTCACCCATGCAGAGCCGCTGTTGACGCTTTCCAGGACGACCTGA
AAAGGCACTTGAAGGAGCACCCCGCCGAGCTCACGAGAGGGGTCCCCGAG
ATGATCGAGGTCCTGCCTCACGGGGCCTCCAAGGCCTCTGGCCTCGAGGC
TCTCCTGAGGGAACTAGGCATTTCTCCCGAAGAGGTGAGTGGGAAGAGCG
GCGCAAGGGGGTAGCTCAGACAAATAAAGAGATAGACTTTGCGAGATAGT
GTGGGGTTTTGGGGAAAGGGGCGGAATGAAGTGCAAAATGTGTTTGTGTG
TGTGTTTCATTTATTTATTTTTATTCTTGCATTATCTCATCGGTACGCAT
GGTCCGCCCGAGGCGTAGAAAATGCTGGAGTTATGACGTATCATATCCTA
TCATGAGAAGATCCGGTGCGAACGAAATGTATAGGTTGGCTGGGAAATGC
ACACGCTTTGGTGGTGCGGTGTGTGTCTTTGTGTGTCTGTACGCGACCAG
GCGATCGGAGAGGGACTACGAGAGAGGTGCTGTGCCTCGTTGGAAAACTA
GATCATATCGTCATTTGGGGCAGAATTTTAGACGTGTAAAAAACTACAGA
ATGCACATTTCTTGAAAAGCGATGGCGGCTATATGATAAAAAATACGTCG
ATTCCAAACCGCGCGCATATGCAGTGCACACCTGAAGCCCATTTCAGCCC
TGAATAATGCGTTGACAGAGAACAGCGTCTTCTTTTAGCCCATCTTCCTT
CGTCGATCGACCTCTCCCATTCTTTTTTGTCGTTGGAAAAACATTTCCTT
TTTTTTCGTTTTCGCAAGGTGATCGCGCTGGGTGACATGGAGAACGACGT
GGAAATGCTCCGGGCAGTGGGGCACGGCGTTGCGATGGGACAGGCCCCCC
TGGAGGTTCGGCGAGCGGCGCGATTCACGGCGCCTTCGAACGAGCTTCAC
GGAGTGGCGGTTGCTCTTGACACCTTTTGCGATATCTGAGAAGATGCCTA
TTATATCTGGCGCCTTCGCCACCTTTTGCCGTGTACGTAGGTGACCCAGT
CTACGAGCCCCCCTCGGTGTAAAACTGCATATTTTTTCATCATAAAAACG
TTCCTGGTAAGATTTGGATATGGCAGCAGCAACACGAGCCCCCAATGTAG
TGGAAGTGGTCTACTAGGAGTCCAAGCGGTGCCGAGCTCCGTCTCGAAGT
ACTTGTAATTTTCCTGAAAGCCAAAAAAAAAAAAAAACTCCTGTGCTGAC
TTCCTACTGTGTGACCCGCAAGGTGTAGAGTGGCGTCCAATTAAAGGGAT
GACAACACACACGCACACATGTTGACAGAACATTTTTACAAAACGCCGCC
GAAAGAACGGATCAAGCTTTCACCACTGCTGTGTGTTATAGAGAGAGAGG
GCAGGGACCAGGGAGATCGGTATACCATTTACGGCACCCCCGATGTGCCA
TCTCCGATTGCGCGGCATTCAACCTGTTGGCGACAGATTGGTCAGGGTTG
ACTTGTTTCGCGGCACCCCGCTTGTAAGCTGTGGTCGGCGGACTTGTTGT
ACATACTATAGGCATTTGAACCCTCTGTTGGTGCATGGAAGTCGCGACGC
GCCGTGGAAATAAATGCTCTCATGAAATCATGTGGATATCATAAAGACTG
CAAACAAAGGTTGCACTTGATCACAAGTACGCCCTCTTCCGCAAGTAAAC
AAACATTTTTTTTTTTGTGATTTCCGTCTTGCTCGAGGCTTTGAGAGGAC
CTGGG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig11:1096337..1112091+

>mRNA_P-littoralis_Contig11.216.1 ID=mRNA_P-littoralis_Contig11.216.1|Name=mRNA_P-littoralis_Contig11.216.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1290bp|location=Sequence derived from alignment at P-littoralis_Contig11:1096337..1112091+ (Pylaiella littoralis U1_48)
ATGAGAGCTTTGGTGTATCTCGTGGTTATCTATTTCGCCACCGCCGCCGC
AGCAGCACCAGCAGCACCAGCAGCTGGACGGAACATGAGACGTGCCTTTG
CGATCAGTAGCAGCACCAGAGGCAGCAGCAGCCGGTGCAGCTTCCTCTTC
GCCAGTAGGTTAGCACCAGCAGGCTTTGCCGCGTCAATCTCCACCACCCC
CTCGGGTCTCCTCTCGTCGTCGTCACCATCTTCTCCTCTTTCTGTGCGGC
GCGGAAGCAGCAGTAGCAGCGGTGCAAATCTCTTGAGCGCCGACGATACC
AACGACAAAGACAGCGGCAGCATCAACACCAGCAAGGCAATGAAAGAAGA
GTGGCCGGCCCCACACCCCAGCCAGTCGTACGTCGCCAGAGCGAGGTGCG
GACAACGGTACGAGCACGACCATGGCGGTGGTACGAGGATTAGGGCTGTG
GTGTCCGACCTGGATGGGACATTGCTGGGGCCGGACAAGCTCGTGTCTGC
CACAACGCTCGAGGCTGTTCGAAAGGCGAGGTCTAAGGGGGTTATATTCG
TGCCGGCCAGCGGGCGGAGCAAAGCGGGCATGTTTTCCTGCATGGGGGAA
TTGGGGGAGGACCTCAAGAAAGATGGCTCTCCGTTCTTGTGTATGAATGG
CTTGACGGTGTACGGCCAGGGCGATGGAGACGGTGACCACGGCGACATCA
TCCACAGCGAACTCATGTGTCCAAACCTGGCGACCAAGGTGGTCGCCTTC
TGGAAGACCCACCCCTCCGCGGGGGCGGCAGGGGTGTCGCTGTGCGGAAG
CAAGGGGGAGACCATCGTGGTCGAGAGCCTGGATGACCGAACACGAAGCT
ACACGGACTGGGGAGAGCCCCTGCCCGAGGAGGTGGGCGACTGGGACGAT
GCCATCACGGGCGGGATGGAGCTGAACCGCCTGTACTTCTGGGGGCCTAC
CCGAGCCGCTGTTGACGCTTTCCAGGACGACCTGAAAAGGCACTTGAAGG
AGCACCCCGCCGAGCTCACGAGAGGGGTCCCCGAGATGATCGAGGTCCTG
CCTCACGGGGCCTCCAAGGCCTCTGGCCTCGAGGCTCTCCTGAGGGAACT
AGGCATTTCTCCCGAAGAGGTGATCGCGCTGGGTGACATGGAGAACGACG
TGGAAATGCTCCGGGCAGTGGGGCACGGCGTTGCGATGGGACAGGCCCCC
CTGGAGGTTCGGCGAGCGGCGCGATTCACGGCGCCTTCGAACGAGCTTCA
CGGAGTGGCGGTTGCTCTTGACACCTTTTGCGATATCTGA
back to top