prot_P-littoralis_Contig11.204.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig11.204.4
Unique Name	prot_P-littoralis_Contig11.204.4
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	254

Homology

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BLAST of mRNA_P-littoralis_Contig11.204.4 vs. uniprot
Match: D8LI03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI03_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 1.000e-26
Identity = 138/253 (54.55%), Postives = 146/253 (57.71%), Query Frame = 0

Query:    1 MNAARAGRSAAGLAIRRTG-STPTQAVSRQAANKTSTASKGKGVVGAPKKPVSQETVTPPTKPPAVAXXXXXXXXXXXXXXXXXXXXXXXXKGAATAALPPTKKSGNNLLLGAVLVGAVGASYYVTIHKMKDQDFLGQVEKEAEEEAQVNLHKSGLKVSTKTVPEKVENAXXXXXXXXXXXXXXXEDKVGKRGRARTHXXXXXXXXXVEEVAXXXXXXXXXXXSSVKVAVTGEPEKPKKKGWRKYILFGPRRE 252
            MNAARAGR  AG A RR+G S P+Q V RQ ANKT+++ KGKGVVG  KKP                XXXXXXXXXXXXXXXXXXX             PP                       VTIHKMKDQDFLG  EKEAEEEAQVNLHKSGLKVS+K VPEKVE                 E            XXXXXXXXX     XXXXXXXXXXX   + AVTGE E PKKKGWRKYI+FGPRRE
Sbjct:    1 MNAARAGRGVAGFAARRSGISAPSQTVHRQVANKTTSSKKGKGVVGKVKKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSVR--CWWERRPPRTN--------------------VTIHKMKDQDFLGAAEKEAEEEAQVNLHKSGLKVSSKVVPEKVEKVFNRAADAVAKATGKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EAAVTGE-EVPKKKGWRKYIIFGPRRE 229

[Close]

BLAST of mRNA_P-littoralis_Contig11.204.4 vs. uniprot
Match: A0A6H5L2F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2F3_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 2.250e-12
Identity = 85/124 (68.55%), Postives = 88/124 (70.97%), Query Frame = 0

Query:  129 MKDQDFLGQVEKEAEEEAQVNLHKSGLKVSTKTVPEKVENAXXXXXXXXXXXXXXXEDKVGKRGRARTHXXXXXXXXXVEEVAXXXXXXXXXXXSSVKVAVTGEPEKPKKKGWRKYILFGPRRE 252
            MKDQDFLG  EKEAEEEAQVNLHKSGLKVS+          XXXXXXXXXXXXXXX     +       XXXXXXXXX     XXXXXXXXXXX     AVTGE E PKKKGWRKYI+FGPRRE
Sbjct:    1 MKDQDFLGDAEKEAEEEAQVNLHKSGLKVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVSEGMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XAVTGEEEVPKKKGWRKYIIFGPRRE 123

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig11.204.4 vs. uniprot

BLAST of mRNA_P-littoralis_Contig11.204.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LI03_ECTSI	1.000e-26	54.55	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L2F3_9PHAE	2.250e-12	68.55	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..103

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig11	contig	P-littoralis_Contig11:1037458..1044916 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig11.204.4	mRNA_P-littoralis_Contig11.204.4	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig11 1037458..1044916 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig11.204.4 ID=prot_P-littoralis_Contig11.204.4|Name=mRNA_P-littoralis_Contig11.204.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=254bp
MNAARAGRSAAGLAIRRTGSTPTQAVSRQAANKTSTASKGKGVVGAPKKP
VSQETVTPPTKPPAVAHETLTPPTKPPQVPIETLTPPLPPKGAATAALPP
TKKSGNNLLLGAVLVGAVGASYYVTIHKMKDQDFLGQVEKEAEEEAQVNL
HKSGLKVSTKTVPEKVENAADRAKSAVKKAARKTEDKVGKRGRARTHTHA
THTRTQVEEVAEDIKEEASDVASSVKVAVTGEPEKPKKKGWRKYILFGPR
REE*