prot_P-littoralis_Contig11.180.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig11.180.1
Unique Nameprot_P-littoralis_Contig11.180.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length143
Homology
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BLAST of mRNA_P-littoralis_Contig11.180.1 vs. uniprot
Match: D8LI04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI04_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 3.260e-11
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 0 
Query:   91 PGVRRAGRVAGKAWKKKHGVEGRTKDMSDEQKKEIRAVKRQAREAFK 137
            PGVRRAGRVAGKAWKK+HG+ G+ KD++ +QKK+IR  KR+AR AF+
Sbjct:   87 PGVRRAGRVAGKAWKKEHGILGKIKDLNPQQKKDIRTAKREARMAFR 133
[Close]
BLAST of mRNA_P-littoralis_Contig11.180.1 vs. uniprot
Match: D8LI05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI05_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 3.500e-9
Identity = 31/53 (58.49%), Postives = 41/53 (77.36%), Query Frame = 0 
Query:   87 EGHCPGVRRAGRVAGKAWKKKHGVEGRTKDMSDEQKKEIRAVKRQAREAFKAA 139
            E  CPG++RAGRVA KAWKK+ G +GR +DM+  QKKE+R V ++AR AF+ A
Sbjct:   80 EEKCPGLQRAGRVAAKAWKKRTGAQGRIRDMTPAQKKEVREVVKKARVAFRDA 132
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig11.180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LI04_ECTSI3.260e-1168.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LI05_ECTSI3.500e-958.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig11contigP-littoralis_Contig11:972991..976001 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig11.180.1mRNA_P-littoralis_Contig11.180.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig11 972911..977559 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig11.180.1 ID=prot_P-littoralis_Contig11.180.1|Name=mRNA_P-littoralis_Contig11.180.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=143bp
MPGQDEEHKAGAGKQGHEGEHGKACHEHGHKGGRGEGPGGRGGRGGGKGC
GRGGKRGHKGKRRPGDHDDTSDEDSEEEGDDGDDDAEGHCPGVRRAGRVA
GKAWKKKHGVEGRTKDMSDEQKKEIRAVKRQAREAFKAAKKG*
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