mRNA_P-littoralis_Contig1.352.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Match: D8LI32_ECTSI (GRIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI32_ECTSI) HSP 1 Score: 467 bits (1202), Expect = 1.610e-157 Identity = 252/275 (91.64%), Postives = 263/275 (95.64%), Query Frame = 2
Query: 233 MSAVEPTMNGKPALAGVSRGPGGG-DGAAEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRRDDEHAGASPMQLLRRVREGGMWWLLVEYDDEYETQGWKGFADEATVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAADKEQVQALEDELQRLRNELTDKEESWRHEHQKRVQEIELLKREGGDTALAAQWRQRYEKLSLEK 1054
MS VEP+ NGK A+AGVSRGPGGG DG AEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRRDDEHAGA+P+QLLRRVREGGMWWLLVEYDDEYETQGWKGFADEA VSEFA+SVNVGEPL IPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAA DKEQV ALEDELQR+R+ELTDKEESWR +QK+V+E E+LKREGGDTALAAQWRQRYEKLSLEK
Sbjct: 1 MSVVEPSTNGKAAMAGVSRGPGGGGDGTAEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRRDDEHAGATPLQLLRRVREGGMWWLLVEYDDEYETQGWKGFADEAAVSEFANSVNVGEPLNIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAVDKEQVHALEDELQRVRDELTDKEESWRQAYQKQVKETEVLKREGGDTALAAQWRQRYEKLSLEK 275
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Match: H3GH33_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH33_PHYRM) HSP 1 Score: 144 bits (363), Expect = 2.200e-34 Identity = 90/252 (35.71%), Postives = 150/252 (59.52%), Query Frame = 2
Query: 317 EQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRRDDEHAGA-SPMQLLRRVREGGMWWLLVEYDDEYETQ-----GWKGFADEATVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAADKEQVQALEDELQRLRNELTDKEESWRHEHQKRVQEIELLKREGGDTALAAQWRQRYEKLSLEK 1054
+ + ++ET K KRLL++A+RSI+ +++++ EKD + LR+ L ++ AR A SP QLL +V GG+ W LVEY DE E + W F DE + +AD + GEPL +P SL+P E V + ++++ ++EE+R++RV+SE+ RKQ++AEIR++SA +A++ +I + + + +A L + + E ++E WR + K +++ E L G T LA +WR+RYE+ EK
Sbjct: 13 KMQEMEETETKLKRLLAMAKRSIDNSKQELVEKDEVIEKLRDELSKSQQARHSWVVDASTRSPRQLLHKVSHGGLLWCLVEYADEIEFEDSKEFAWHCFRDEGEIQAYADRAS-GEPLTLPDFSLTPYEVERVKKSLKEEIDRVQEEFRRYRVRSEITRKQKDAEIRKMSANVMAKQTEQILETDLSGELQSSKAQVRRLTKAQAEAEERESDWRRKFDKLMKDYEKLSGTMGGTVLAMEWRERYEQSVREK 263
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Match: A0A6A3FS57_9STRA (GRIP domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FS57_9STRA) HSP 1 Score: 143 bits (360), Expect = 2.510e-33 Identity = 91/258 (35.27%), Postives = 154/258 (59.69%), Query Frame = 2
Query: 314 AEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRRDDEHAGA------SPMQLLRRVREGGMWWLLVEYDDEYETQ-----GWKGFADEATVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAADKEQVQALEDELQRLRNELTDKEESWRHEHQKRVQEIELLKREGGDTALAAQWRQRYEKLSLEK 1054
A+ + +++T K KRLL++A+RSI+ ++++I EKD + LRE L A+ R +H+ A P QLL +V G + W LVEY DE E W F EA + +A+ + GEPL +P SL+P E V + ++++ ++EE+R++RV+SE+ RKQ++AEIR++SA ++A++ +IS + + + +A L + + E ++E WR + +K +++ E L G+T LA +WR+RYE+ EK
Sbjct: 67 AKLQEMEDTENKLKRLLAMAKRSIDNSKQEIAEKDAAIQQLREEL-----AKSRQTQHSWAVDAATRDPRQLLHKVSHGNLLWCLVEYADESELDEAKEFAWHCFRSEAEIQAYANRAS-GEPLTLPDFSLTPYEVERVKKSLKEEIDRVQEEFRRYRVRSEITRKQKDAEIRKMSANAMAKQTEQISETDLSGELQSSKAQIRRLTKAQAEAEERESDWRRKFEKLMKDYEKLSGTMGETVLAMEWRERYEQSVREK 318
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Match: A0A7S2S2V8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2V8_9STRA) HSP 1 Score: 138 bits (347), Expect = 1.040e-31 Identity = 101/284 (35.56%), Postives = 158/284 (55.63%), Query Frame = 2
Query: 293 PGGGDG--AAEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRR----------------------DDEHAGAS------PMQLLRRVREGGMWWLLVEYDDEYETQGWKGFADEATVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAADKEQVQALEDELQRLRNELTDKEESWRHEHQKRVQEIELLKREGGDTALAAQWRQRYEKLSLEK 1054
PGGG AA + + + ++KRLL +R+ +E Q+++ EK+ + L L R+ + +GA P + LRRV G +L E++ + W+ F ++ +S+F + GEPL +P L+PEES V E+A+ VA I EE+R+FRV++E+ RKQ++AE RQ +A SIAE+QRRI+GQ ++ ++ + +++ +LR +L D+EE WR + K +E E L+ EG + ALAAQWRQRYE+ S EK
Sbjct: 22 PGGGPATPAAPGDKAAQQINQYKRLLIQSRQMLENYQKKLQEKERIVEHLAHELQTTRQQRQSAXXXXXXXXXXXXXXXXXASTAEPHPSGAGDSRKAVPHRALRRVDVNGGISVLFEFETGEDQ--WRIFHNDLELSDFIRR-DSGEPLALPLACLTPEESEHVAEEAKNSVAKITEEFRRFRVRAEISRKQKDAEARQATASSIAEQQRRINGQDVESELQKARLQAEQVVQLREQLADQEERWRKQCDKLSRENEKLRSEGSEAALAAQWRQRYEQCSREK 302
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Match: A0A2P4YJD4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YJD4_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.920e-31 Identity = 86/253 (33.99%), Postives = 150/253 (59.29%), Query Frame = 2
Query: 314 AEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRRDDEHAGA-SPMQLLRRVREGGMWWLLVEYDDEYETQ-----GWKGFADEATVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAADKEQVQALEDELQRLRNELTDKEESWRHEHQKRVQEIELLKREGGDTALAAQWRQRYEKLSLEK 1054
A+ + ++ET K KRLL++A+RSI+ +++++TEKD + LR+ L ++ AR A P QLL +V G + W LVEY +E E W F E + +A+ + GEPL +P S++P E V + ++++ ++EE+R++RV+SE+ RKQ++AEIR++S +A++ +IS + + + +A L + + E ++E WR + +K +++ E L G+T LA +WR+RYE+ EK
Sbjct: 57 AKMQEMEETENKLKRLLAMAKRSIDNSKQELTEKDETIQKLRDELVKSQQARHSWFVDASTRDPRQLLHKVAHGNLLWCLVEYANESEFDDSKELAWHCFRTEEEIQAYANRAS-GEPLTLPDFSMTPYEVERVKKGLKEEIDRVQEEFRRYRVRSEITRKQKDAEIRKMSMNVMAKQTEQISETDLSGELQLSKAQIRRLTKAQTEAEERESDWRRKFEKLMKDYEKLSGTMGETVLAMEWRERYEQSVREK 308
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Match: A0A8K1CW38_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CW38_PYTOL) HSP 1 Score: 137 bits (344), Expect = 4.740e-30 Identity = 82/253 (32.41%), Postives = 152/253 (60.08%), Query Frame = 2
Query: 311 AAEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRR-DDEHAGASPMQLLRRVREGGMWWLLVEY--DDEYETQ--GWKGFADEATVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAADKEQVQALEDELQRLRNELTDKEESWRHEHQKRVQEIELLKREGGDTALAAQWRQRYEKLSLEK 1054
+A+ + ++ET K KRLL++A+RSI+ +++++ +KD ++ LR L +A + P ++L +V +G W LVEY DD +T W F E + +A+ N GEPL +P +SL+P E + +D ++++ ++EE+R++RV++E+ RKQ++AEIR++SA ++A + +IS + + + +A L + + E ++E WR + +K +++ E L G+T LA +WR+RYE+ E+
Sbjct: 51 SAKIQEMEETETKLKRLLAMAKRSIDNSKQELADKDAEIEQLRAELATKAHASHTWETNETTRDPRRILSKVAQGNTLWCLVEYASDDSDDTSDFAWHRFQSEEQIKAYANRAN-GEPLALPSLSLTPFEVERMKKDLKEEIDRVQEEFRRYRVRAEITRKQKDAEIRKMSANAVARQAEQISETDLSGELQSARAQIRRLSKQQAETEEREAEWRRKFEKLMKDYEKLSGTMGETVLATEWRERYEQAVRER 302
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Match: A0A7S2G525_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G525_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.130e-28 Identity = 70/174 (40.23%), Postives = 116/174 (66.67%), Query Frame = 2
Query: 329 VQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRRDDEHAGASPMQLLRRVREGGMWWLLVEYDDEYETQGWKGFADEATVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQ 850
+Q+ L ++K+LL +R+++E+ Q QI EKD + +LR L + + P++ LR + G W+L ++++E + + W+ F E + +F + GEP++IPP+SL+PEESA V+ +AR+ V I EE+R++RVKSE+ RKQ++AE +QV+A SIAE+Q+RI+GQ
Sbjct: 3 MQDKLNQYKKLLIQSRQTLEKYQLQIVEKDRMVDSLRSELEKSASRVELATPLGQKKPVRALRCIHHSGKIWVLFQFEEEGDEE-WRSFMSEVELHDFVRR-DSGEPVRIPPISLAPEESAKVVTEARQSVTKISEEFRRYRVKSEINRKQKDAEAKQVAASSIAEQQQRINGQ 174
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Match: A0A2D4C3D3_PYTIN (GRIP domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C3D3_PYTIN) HSP 1 Score: 128 bits (322), Expect = 1.930e-28 Identity = 81/254 (31.89%), Postives = 150/254 (59.06%), Query Frame = 2
Query: 311 AAEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGA-AENARRRDDEHAGASPMQLLRRVREGGMWWLLVEYDDEYETQG-----WKGFADEATVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAADKEQVQALEDELQRLRNELTDKEESWRHEHQKRVQEIELLKREGGDTALAAQWRQRYEKLSLEK 1054
+A+ + ++ET AK KRLL++A+RSI+ +++++ EKD ++ LRE L A + + + P + + +V G W VEY E++ W F E V +A ++ GEPL IP +SL+P E +V +D ++++ ++EE+R++RV++E+ RKQ++AE++++SA ++A + +IS + + + +A L + E ++E WR + +K ++ E L G+T LA +WR+RYE+ +K
Sbjct: 40 SAKLQEMEETEAKLKRLLAMAKRSIDNSKQELAEKDTEIDHLREELKKKVAVAHSWEPDESTRPPRRFIYKVAHGSSIWCYVEYASEHDHDAQRDYAWHRFHSEEQVKAYA-ALASGEPLVIPALSLTPFEVESVKKDLKEEIDRVQEEFRRYRVRAEITRKQKDAELKKMSANAVARQAEQISETDLSGELQSARAQIRLLTKQNTETEEREADWRRKFEKLYKDYEKLSGTMGETVLATEWRERYEQAVRDK 292
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Match: A0A3R7KVI4_9STRA (GRIP domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KVI4_9STRA) HSP 1 Score: 128 bits (322), Expect = 3.430e-28 Identity = 82/242 (33.88%), Postives = 144/242 (59.50%), Query Frame = 2
Query: 311 AAEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREALGAAENARRRDDEHAGA-SPMQLLRRVREGGMWWLLVEYDDEYETQ-----GWKGFADEATVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAADKEQVQALEDELQRLRNELTDKEESWRHEHQKRVQEIELLKREGGDTALAAQ 1018
+A+ + ++ET K KRLL++A+RSI+ ++++++EKD + LRE + + R A P QLL +V GG+ W LVEY +E E W F DEA + +A+ + GEPL +P SL+P E V + ++++ ++EE+R++RV+SE+ RKQ++AEIR++SA +A++ +IS + + + +A L + + E ++E WR + +K +++ E L G+T LA +
Sbjct: 65 SAKIQEMEETETKLKRLLAMAKRSIDNSKQELSEKDEAIQNLREEVSRSAQTRHSWSVDASTRDPRQLLHKVAHGGLLWCLVEYANESEFDEAKEVAWHCFRDEAEIQAYANRAS-GEPLTLPDFSLTPYEVERVKKSLKEEIDRVQEEFRRYRVRSEITRKQKDAEIRKMSANVMAKQTEQISETDLSGELQSSKAQIRRLTKAQTEAEERESEWRRKFEKLMKDYEKLSGTMGETVLAME 305
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Match: A0A7S4D4P1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4P1_HETAK) HSP 1 Score: 122 bits (307), Expect = 4.700e-28 Identity = 80/226 (35.40%), Postives = 131/226 (57.96%), Query Frame = 2
Query: 305 DGAAEQENVQETLAKFKRLLSLARRSIEENQRQITEKDGQLAALREAL------GAAENARRRDDEHAGASPMQLLRRVREGGMWWLLVEY----DDEYETQGWKGFADEATVSEFADSVNVGEPLKIPPVSLSPEESATVLEDARKQVASIREEYRKFRVKSELGRKQREAEIRQVSAESIAEKQRRISGQGAAADKEQVQALEDELQRLRNELTDKEESWRHEH 952
D A++Q ++ET+ K+K+LLS+AR+ +E+NQR +++KD Q+ L+ L A ENA+ R E +P +++RRV + G+ W+L E+ D W+ F + +F V+ GEP++IPP L+ +E+ + DA+ +V +EE+RK+++KSE+ RKQ+EAE +Q +AE RRI+G A + + + LR EL +E WR H
Sbjct: 20 DPASQQ--LKETILKYKKLLSMARQGLEDNQRHLSDKDEQIRQLQHELESSKQRNAKENAKTRGLE---MNPKRIVRRVDQDGVIWVLFEWYSVETDARSPPSWREFNSYGELEDFVQCVS-GEPIEIPPACLTSDETQQKINDAKAEVKKTQEEFRKYKIKSEIARKQKEAETKQALGAGLAEASRRIAGADLEAQARRGREARAQADALRQELAQQELMWRKAH 239 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.352.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1.352.2 >prot_P-littoralis_Contig1.352.2 ID=prot_P-littoralis_Contig1.352.2|Name=mRNA_P-littoralis_Contig1.352.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=384bp MMRWTRDSPGGEAASPFSVFLPFYFLPEKGVPIKTIEITMRGHERKFRRTback to top mRNA from alignment at P-littoralis_Contig1:1553532..1558391+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1.352.2 ID=mRNA_P-littoralis_Contig1.352.2|Name=mRNA_P-littoralis_Contig1.352.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4860bp|location=Sequence derived from alignment at P-littoralis_Contig1:1553532..1558391+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1:1553532..1558391+ >mRNA_P-littoralis_Contig1.352.2 ID=mRNA_P-littoralis_Contig1.352.2|Name=mRNA_P-littoralis_Contig1.352.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1152bp|location=Sequence derived from alignment at P-littoralis_Contig1:1553532..1558391+ (Pylaiella littoralis U1_48)back to top |