mRNA_P-littoralis_Contig11.88.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig11.88.4 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 572 bits (1474), Expect = 5.650e-170 Identity = 376/694 (54.18%), Postives = 468/694 (67.44%), Query Frame = 3
Query: 1659 SVTPVKFLGCTFQENIALADGGGIYSVADHDSIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTFYCDIGTFSLEVSIAEGDDDTCRFGEVCSRCSSACGSVLEEAGATMGRSESVPYCEAAPEGTTMPTKGGTIQTLVVEPGYFRHSLTSTDLKECFYEDACQGGVLLSEYCASGYKGPYCAVCEENYAQGYQHTCKSCVGESKRNAYIAIAIAGAAVLTGMAVVSAWLVSVVEPSLDAKNQPSKWTQQLVVVWRGGVWQKFPLAAVKIVVVMWQIVTQFSDMSGVDYPSPYDEFLSYVEVVNLDLGFLLSFACVYRTNFYNRLMIATISPAITLAALGCTYLVALRRNXXXXXXXXGAASFHFAATVSAPKFPPPTSLSAPTSPPESRDVLTSLGYTSELGATNSPQDSLPIKGEGSGEEQGQQKDATAEAVLTVIRNRHMSMALLVVFVVYATVSHTLFGAFVCDRIGD-SSYLRADYSLECFTALYYRYQIYAAVMIFVYPVGIPFLLGWWLFRHREEL-QAGQATYRV-SPAADLWGPYKPTRYYYEVVECFRRVALTGTGVFIHPDSAAQIAIVLVLATFFMVISEGLSPFCRATEMWLYRAGNYVIFASMYLALLLKLDVSDEDDQSQEVFSGLLVTFHVVMILGVLGQGLLVFTDW 3731
+ P KFL C F+EN A DGG IYSVA D ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +FYC+ GTFS EV I EG+D CRFG VCSRC+S C S LE+ T+ + +P CEA PEG ++GGT+ TL + PGY+R S TSTD++ECFYEDAC+GG ++ EYCA+GY GPYCAVC ++ GY H+CKSC+G+S+R A+ ++ G VL + ++A LVSVVE + +K PS+W QQ VW+ + + PL A+KIVVV+WQIVTQ+SD++GV+YP Y +FLS V+VVNLDLGF+LS ACV T+FY+RL++ TI PA+ L LGCTYL + V+++RH+S+AL ++FV+YATVS+T+F FVCD + D +SYLR+DYSL C T + Y++YA +MI VYPVGIP + GWWLF+HR EL Q G+ V PAADLW PYKP+ YYYEVVECFRR+ALTG VFI+PDS+AQ+AIVL+LA FMV+SE LSPF R EMWLYR G+YV+FASMYLALLL++DVSDE +QSQEVFSG+LV H M+L V+ QGLL+F W
Sbjct: 433 TAAPTKFLSCVFEENHASEDGGAIYSVAGFDMVKDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFYCEEGTFSTEVEI-EGED-VCRFGLVCSRCASECASELEDE-VTVADPDLLPACEAVPEGAQTTSRGGTLATLEILPGYYRSSATSTDIRECFYEDACEGGKVVGEYCAAGYTGPYCAVCTAGFSPGYFHSCKSCMGDSRRRAFYVVSAVGVLVLLAVVFMAAKLVSVVETTPSSKA-PSRW-QQKRSVWQARMKKILPLTAIKIVVVVWQIVTQYSDVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGLLGCTYLA-----------------------------------------------------------------------------------------MGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELKQEGRERRAVLKPAADLWEPYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSGVLVIAHAAMLLVVVLQGLLIFAGW 1032
BLAST of mRNA_P-littoralis_Contig11.88.4 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 571 bits (1472), Expect = 2.970e-168 Identity = 368/695 (52.95%), Postives = 453/695 (65.18%), Query Frame = 3
Query: 1665 TPVKFLGCTFQENIALADGGGIYSVADHDSIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTFYCDIGTFSLEVSIAE---GDDDTCRFGEVCSRCSSACGSVLEEAGATMGRSESVPYCEAAPEGTTMPTKGGTIQTLVVEPGYFRHSLTSTDLKECFYEDACQGGVLLSEYCASGYKGPYCAVCEENYAQGYQHTCKSCVGESKRNAYIAIAIAGAAVLTGMAVVSAWLVSVVEPSLDAKNQPSKWTQQLVVVWRGGVWQKFPLAAVKIVVVMWQIVTQFSDMSGVDYPSPYDEFLSYVEVVNLDLGFLLSFACVYRTNFYNRLMIATISPAITLAALGCTYLVALRRNXXXXXXXXGAASFHFAATVSAPKFPPPTSLSAPTSPPESRDVLTSLGYTSELGATNSPQDSLPIKGEGSGEEQGQQKDATAEAVLTVIRNRHMSMALLVVFVVYATVSHTLFGAFVCDRIGD-SSYLRADYSLECFTALYYRYQIYAAVMIFVYPVGIPFLLGWWLFRHREELQAG--QATYRVSPAADLWGPYKPTRYYYEVVECFRRVALTGTGVFIHPDSAAQIAIVLVLATFFMVISEGLSPFCRATEMWLYRAGNYVIFASMYLALLLKLDVSDEDDQSQEVFSGLLVTFHVVMILGVLGQGLLVFTDW 3731
TPVKFL C F+ N AL DGG +YSVA D I+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX N FYC+ G F E I + G D CRFG VCSRC+S C S LE A A + +E++P CE APEG+ +G T+ TL + PG++R S TSTD++ECF++ AC+GG + YCA GY GPYCAVC Y+ GY TCKSC+G+SK++A + A GA L + + + LVSVVE + Q SK ++ W+ V Q PL AVKIVVV+WQIVTQ+SD++GV+YP Y +FLS V+VVNLDLGF+LSFACVY TNFY+RL++ATI P + L LGCTYLVA RRN E + ++ RH+S+ L V+FV+YA VS+T+F FVCD + D +SYLRADYSL C T L+ Y++YA + + VYPVGIP + GWWLF++R EL+ ++ + PAADLW PYKP+ YYYEVVECFRR+ALTG VFI+PDS+AQ+AIVL+LA FMV+SE LSPF R EMWLYRAG+YV+FASMYLALLL++DVSDE DQSQEVFSG++V HV M L V+ QGLL+F W
Sbjct: 424 TPVKFLDCLFESNDALEDGGALYSVASFDMIRGSKFFQNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDNDFYCEEGEFGTETLIDKDLFGGADQCRFGRVCSRCASECDSELESA-AELVDAETLPTCEEAPEGSRTTRRGATLATLEILPGFYRSSETSTDIRECFHKQACEGGSAVGTYCAEGYIGPYCAVCSAGYSPGYSRTCKSCMGDSKKSALVFAAAIGALALAAVVALVSRLVSVVEVG-PPQQQGSKGWRRTCSAWQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRH------------------------------------------------------------------------------CEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELKQEDRESQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVAQGLLIFVGW 1038
BLAST of mRNA_P-littoralis_Contig11.88.4 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 549 bits (1414), Expect = 1.390e-160 Identity = 368/701 (52.50%), Postives = 450/701 (64.19%), Query Frame = 3
Query: 1665 TPVKFLGCTFQENIALADGGGIYSVADHDSIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTFYCDIGTFSLEVSIAE---GDDDTCRFGEVCSRCSSACGSVLEEAGATMGRSESVPYCEAAPEGTTMPTKGGTIQTLVVEPGYFRHSLTSTDLKECFYEDACQGGVLLSEYCASGYKGPYCAVCEENYAQGYQHTCKSCVGESKRNAYIAIAIAGAAVLTGMAVVSAWLVSVVE----PSLDAKNQPSKWTQQLVVVWRGGVWQKFPLAAVKIVVVMWQIVTQFSDMSGVDYPSPYDEFLSYVEVVNLDLGFLLSFACVYRTNFYNRLMIATISPAITLAALGCTYLVALRRNXXXXXXXXGAASFHFAATVSAPKFPPPTSLSAPTSPPESRDVLTSLGYTSELGATNSPQDSLPIKGEGSGEEQGQQKDATAEAVLTVIRNRHMSMALLVVFVVYATVSHTLFGAFVCDRIGD-SSYLRADYSLECFTALYYRYQIYAAVMIFVYPVGIPFLLGWWLFRHREELQA----GQATYRVSPAADLWGPYKPTRYYYEVVECFRRVALTGTGVFIHPDSAAQIAIVLVLATFFMVISEGLSPFCRATEMWLYRAGNYVIFASMYLALLLKLDVSDEDDQSQEVFSGLLVTFHVVMILGVLGQGLLVFTDW 3731
T VKFL C F+ N A DGG +YSVA D I+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN FYC+ G F E I + G D CRF VCSRC+S CGS LE A + ++++P CE APEG+ +G T+ TL V PG++R S TSTD++ECF++ AC GG + YC+ GY GPYCAVC Y+ GY TCKSC+G SK++A + A G L + V+ + LVSVVE SK ++ + V Q PL AVKIVVV+WQIVTQ+SD++G++YP Y +FLS V+VVNLDLGF+LSFACVY TNFY+RL++ATI P + L LGCTY+VA RRN E + ++ RH+S+ L V+FV+YA VS+T+F FVCD + D +SYLRADYSL C T L+ Y++YA + + VYPVGIP + GWWLF++R EL+ GQA R PAADLW PYKP+ YYYEVVECFRR+ALTG VFI+PDS+AQ+AIVL+LA FMV+SE LSPF R EMWLYRAG+YV+FASMYLALLL++DVSDE DQSQEVFSG++V HV M L V+ QGLL+F W
Sbjct: 400 TTVKFLDCLFESNGASEDGGALYSVASFDVIRGSNFSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDFYCEEGEFGTETLIDKDLFGGADQCRFRRVCSRCASECGSELERT-AELVDADTLPTCETAPEGSRTTRRGATLATLEVLPGFYRSSETSTDIRECFHKKACDGGSAIGTYCSEGYIGPYCAVCAAGYSPGYSRTCKSCMGNSKKSALVFAAAIGLLALAAVMVLVSRLVSVVEVGPRQQXXXXXXGSKGWRRTCSALQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRH------------------------------------------------------------------------------CEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQEDREGQAELR--PAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQGLLIFVGW 1019
BLAST of mRNA_P-littoralis_Contig11.88.4 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE) HSP 1 Score: 388 bits (996), Expect = 7.290e-110 Identity = 254/694 (36.60%), Postives = 339/694 (48.85%), Query Frame = 3
Query: 1686 CTFQENIALADGGGIYSVADHDSIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTFYCDIGTFSLEVSIAEGD-DDTCRFGEVCSRCSSAC----GSVLEEAGATMGRSESVPYCEAAPEGTTMPTKGG-TIQTLVVEPGYFRHSLTSTDLKECFYEDACQGGVLLSEYCASGYKGPYCAVCEENYAQGYQHTCKSCVGESKRNAYIAIAIAGAAVLTGMAVVSAWLVSVVEPSLDAKNQPSKWTQQLVVVWRGGVWQKFPLAAVKIVVVMWQIVTQFSDMSGVDYPSPYDEFLSYVEVVNLDLGFLLSFACVYRTNFYNRLMIATISPAITLAALGCTYLVALRRNXXXXXXXXGAASFHFAATVSAPKFPPPTSLSAPTSPPESRDVLTSLGYTSELGATNSPQDSLPIKGEGSGEEQGQQKDATAEAVLTVIRNRHMSMALLVVFVVYATVSHTLFGAFVCDRIGDS-SYLRADYSLECFTALYYRYQIYAAVMIFVYPVGIPFLLGWWLFRHREEL-QAGQATY---------RVSPAADLWGPYKPTRYYYEVVECFRRVALTGTGVFIHPDSAAQIAIVLVLATFFMVISEGLSPFCRATEMWLYRAGNYVIFASMYLALLLKLDVSDEDDQSQEVFSGLLVTFHVVMILGVLGQGLL 3716
C FQ N A+ DGG +YS A +D I+ NT+YC G + E I E + TCRFG VCS C+++C GSV+ + VP CE A G GG T+ L + GY+R S S ++ +C+ E+AC GG +S+YC GY+G YCAVC+E YA GYQ +C C GE+ R+A L G+A+V A LV VV+ + S W ++L R + + PL ++KIVVV WQIVTQFS + V YP Y+ FL+ + VVN DLGFLLS +C+ NFY RL T+ P + L TY ++ RN H A + A K ++H+S+AL + FVVY++VS +F FVC+ + D +YLRADYSL C T ++ YA +MI VYPVGIP + WWL +R +L + G + + P DLW YKP RYY+EV+EC RR+ALTG F+ PDSAAQ+AI +VLA FM +S+ LSPF + WLYR G ++IF SMYLALLLK+D SDED QSQ F+ +L+ HV M+L VL Q +L
Sbjct: 456 CVFQGNSAV-DGGAMYSAAGYDGIKDCRFEDNLAVGSGGAYLHSGVLVELDRSTFVGNRARDAGLAVQSLGIAGNITDTTFESNTYYCSSGQYGYEYEIGEDEVSGTCRFGVVCSSCAASCEDNPGSVV------VVNDAHVPICETAMTGVDTSGDGGVTLPELNLLRGYYRTSAESQNVLKCYQEEACIGGTDVSQYCQEGYRGAYCAVCDEGYASGYQFSCSICDGENLRSAIGTSVALFFVALVGIALVIADLVRVVDEV--EPDTASTWGKRLTSC-RDRIVKAVPLTSIKIVVVAWQIVTQFSSVVNVVYPDIYESFLAVLNVVNFDLGFLLSVSCIVDVNFYGRLFFTTVGPLVVFGGLAATYAISRSRNR------------HSPAGMQAAK------------------------------------------------------------------SKHLSIALFISFVVYSSVSFNIFQTFVCETLDDGVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLVKVGTSGNCLGGAPRLDHLQPMRDLWSSYKPRRYYFEVLECGRRIALTGLAAFLLPDSAAQVAIEVVLAAIFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFAKVLIAAHVGMVLVVLVQAVL 1061
BLAST of mRNA_P-littoralis_Contig11.88.4 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE) HSP 1 Score: 365 bits (938), Expect = 8.940e-103 Identity = 223/603 (36.98%), Postives = 321/603 (53.23%), Query Frame = 3
Query: 1935 NTFYCDIGTFSLEVSIAEGDDDTCRFGEVCSRCSSACGSVLEEAGATMGRSESVPYCEAAPEGTTMPTKGGTIQTLVVEPGYFRHSLTSTDLKECFYEDACQGGVLLSEYCASGYKGPYCAVCEENYAQGYQHTCKSCVGESKRNAYIAIAIAGAAVLTGMAVVSAWLVSVVEPSLDAKNQPSKWTQQLVVVWRGGVWQKFPLAAVKIVVVMWQIVTQFSDMSGVDYPSPYDEFLSYVEVVNLDLGFLLSFACVYRTNFYNRLMIATISPAITLAALGCTYLVALRRNXXXXXXXXGAASFHFAATVSAPKFPPPTSLSAPTSPPESRDVLTSLGYTSELGATNSPQDSLPIKGEGSGEEQGQQKDATAEAVLTVIRNRHMSMALLVVFVVYATVSHTLFGAFVCDRIGDS-SYLRADYSLECFTALYYRYQIYAAVMIFVYPVGIPFLLGWWLFRHREELQAGQATY--RVSPAADLWGPYKPTRYYYEVVECFRRVALTGTGVFIHPDSAAQIAIVLVLATFFMVISEGLSPFCRATEMWLYRAGNYVIFASMYLALLLKLDVSDEDDQSQEVFSGLLVTFHVVMILGVLGQGLLVFTDWQ 3734
NT C G + + E +DD+CRF C+RCS+ C ++ TM S ++P C + EGT + G T+ TL ++ GY+R S S + EC+ AC GG YCA GY+GPYC+VC + YA G + C C G S +A AVV+A LV VV+ K+ ++ + + + V FPL VKIVVV WQI+TQF ++G YP Y +FL+ + VNLD+GF+LS++CV T+F++RL+IATI P + LA L T++V +RN +EA + ++N+H+S AL V+F +Y++VS T+F FVCD + D SYLRADYSL C T Y ++ YAAVM+ VYP+GIP W L +R++LQ + P DLW YKP+RYYYE++E RR+ LTG VF+ P S+AQ+A+VL+LA F+ ISE LSPF + +M LYR GN V+ AS+Y+ALLLK++VS+E ++ F +L+ +V M + ++ Q L+ +W+
Sbjct: 515 NTLNCPPGENAYD---KEAEDDSCRFELACARCSADCDAIPSSV--TMADS-TIPVCVESMEGTKASSSGTTVATLDLQEGYYRTSAESQVVVECYLTSACAGGTDPKNYCADGYEGPYCSVCADGYAPGTAYQCHECSGTSMGSAVGVAXXXXXXXXXXXAVVAADLVRVVDGDDSIKD--ARTLKGRLSRFHAFVVTAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQDFLNALTPVNLDIGFILSYSCVVITDFFDRLLIATIGPVVVLALLALTFVVGRKRNID------------------------------------------------------------------------------SEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDLQKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQMAVVLLLAVVFLFISESLSPFTKKIDMALYRWGNGVVLASIYVALLLKVNVSEEGSETLSAFVVVLILANVCMAITLVVQSFLLVREWR 1031
BLAST of mRNA_P-littoralis_Contig11.88.4 vs. uniprot
Match: A0A6H5L874_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L874_9PHAE) HSP 1 Score: 335 bits (860), Expect = 9.760e-96 Identity = 252/498 (50.60%), Postives = 316/498 (63.45%), Query Frame = 3
Query: 1410 AFFGYNQAVGGSGGGMYFSGVPELTIANXXXXXXXXXXXXXXXXXXXXEAPLSTSEQGTFP--------WDPTDXXXXXXXXXXXXXXXXS---------------------------SVTPVKFLGCTFQENIALADGGGIYSVADHDSIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTFYCDIGTFSLEVSIAEGDDDTCRFGEVCSRCSSACGSVLEEAGATMGRSESVPYCEAAPEGTTMPTKGGTIQTLVVEPGYFRHSLTSTDLKECFYEDACQGGVLLSEYCASGYKGPYCAVCEENYAQGYQHTCKSCVGESKRNAYIAIAIAGAAVLTGMAVVSAWLVSVVEPSLDAKNQPSKWTQQLVVVWRGGVWQKFPLAAVKIVVVMWQIVTQFSDMSGVDYPSPYDEFLSYVEVVNLDLGFLLSFACVYRTNFYNRLMIATISPAITLAALGCTYLVALRRN 2798
+FFG N A+ GSGG +Y S VP+ T N E S+S F +DP D S P KFLGC F EN A DGG IYSVA D ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +FYC+ GTFS EV I EG++ CRFG VCSRC+S CGS L++ T+ + +P CEA PEG T+GGT+ TL + PGY+R TSTD++ECF+EDAC+GG ++ EYCA+GY GPYCAVC +++GY H+CKSC+G+S+R A+ ++ GA VL + ++A LVSVVE + ++ PS+W Q+ VWR + + PL A+KIVVV+WQIVTQ+SD++GV+YP Y +FLS ++VVNLDLGF+LS ACVY T+FY+RL++ TI PA+ L LGCTYLVA RRN
Sbjct: 174 SFFG-NTALEGSGGAIYSSNVPQATFKNANFTSNAAVWGGAVASFSSGEVASSSSSSTPFRTSGSSGSGYDPEDLTPSLTTTAGGATTVTSLSADPDADGSGXXXXXXXXXXXXXXXXXAAPTKFLGCVFGENHASEDGGAIYSVAGFDMVKESTFFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFYCEEGTFSTEVEI-EGEE-VCRFGRVCSRCASECGSELQDE-VTVADPDLLPACEAVPEGAQTTTRGGTLATLEILPGYYRSLATSTDIRECFFEDACEGGQVVGEYCATGYSGPYCAVCTAGFSRGYFHSCKSCMGDSRRRAFYVVSTVGALVLLAVVFLAAKLVSVVEMT-PSRKAPSRW-QRKRSVWRARIKKILPLTAIKIVVVVWQIVTQYSDVAGVEYPGAYKDFLSVIDVVNLDLGFILSLACVYDTDFYDRLLLTTICPAVVLGLLGCTYLVARRRN 665
BLAST of mRNA_P-littoralis_Contig11.88.4 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 326 bits (835), Expect = 4.200e-87 Identity = 218/631 (34.55%), Postives = 312/631 (49.45%), Query Frame = 3
Query: 1935 NTFYCDIGTFSLEVSIAEGDDDTCRFGEVCSRCSSACGSVLEEAGATMGRSESVPYCEAAPEGTTMPTKGGTIQTLVVEPGYFRHSLTSTDLKECFYEDACQGGVL-LSEYCASGYKGPYCAVCEENYAQGYQHTCKSCVGESKRNAYIAIAIAGAAVLTGMAVVSAWLVSVVEPSLDAKNQPSKWTQQLVVVWRGGVWQKFPLAAVKIVVVMWQIVTQFSDMSGVDYPSPYDEFLSYVEVVNLDLGFLLSFACVYRTNFYNRLMIATISPAITLAALGCTYLVALRRNXXXXXXXXGAASFHFAATVSAPKFPPPTSLSAPTSPPESRDVLTSLGYTSELGATNSPQDSLPIKGEGSGEEQGQQKDATAEAVLTVIRNRHMSMALLVVFVVYATVSHTLFGAFVCDRIGDSS-YLRADYSLECFTALYYRYQIYAAVMIFVYPVGIPFLLGWWLFRHREELQAG----QATYRVSPAADLWGPYKPTRYYYEVVECFRRVALTGTGVFIHPDSAAQIAIVLVLATFFMVISEGLSPFCRATEMWLYRAGNYVIFASMYLALLLKLDVSDEDDQSQEVFSGLLVTFHVVMILGVLGQGLLVFTDWQ-REQQQEENAAGAALPSKLGKTVAK 3806
N F C GTF + F +C+ C + C G P C + +T T+QTL ++ G++R S +ST++ C++ DAC GGV S YC GY+GPYC +C + Y + C C S +A+ +A V +AVVS V+ E + K + + + PL ++KIV+V WQI+TQF+ ++ V YP Y + L ++V N DL +LLS CV NF+ RL+++TISP + L L CTY A R N P K L +I N+H+++ LL+ F VY++VS TLF AF CD + S YLRADYS+EC ++ + Q+YA MI +Y VGIP L LF+ R+ L+ + RV ++LW PYKP +YYEV+ECFRRV L G VFI+P++AAQIA+ L++A F ++SEGL+P+ + W+ R G+ V+F SMY+ALLLK+DVSDE SQEVF +LV HV MIL VL + + W RE+++ +AA S GK++ +
Sbjct: 991 NGFDCPAGTFRNVTGSVD------HFEAICNGCETTCD------GCVFAEGSLAPICTEVMDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVS--YVTSGEVGMGRKGGIVELVTRYI-----------PLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGE-----------------------------------------------------------PEK-------------------LNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAV--QAWSLREERRSLSAASPRFRS--GKSLTR 1514
BLAST of mRNA_P-littoralis_Contig11.88.4 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE) HSP 1 Score: 325 bits (832), Expect = 8.600e-87 Identity = 248/732 (33.88%), Postives = 353/732 (48.22%), Query Frame = 3
Query: 1656 SSVTPVKFLGCTFQENIALADGGGIYSVADHDSIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTFYCDIGTFSLEVSIAEGDDDTCRFGEVCSRCSSACGSVLEEAGATMGRSESVPYCEAAPEGTTMPTKGGTIQTLVVEPGYFRHSLTSTDLKECFYEDACQGGVL-LSEYCASGYKGPYCAVCEENYAQGYQHTCKSCVGESKRNAYIAIAIAGAAVLTGMAVVSAWLVSVVEPSLDAKNQPSKWTQQLVVVWRGGVWQKFPLAAVKIVVVMWQIVTQFSDMSGVDYPSPYDEFLSYVEVVNLDLGFLLSFACVYRTNFYNRLMIATISPAITLAALGCTYLVALRRNXXXXXXXXGAASFHFAATVSAPKFPPPTSLSAPTSPPESRDVLTSLGYTSELGATNSPQDSLPIKGEGSGEEQGQQKDATAEAVLTVIRNRHMSMALLVVFVVYATVSHTLFGAFVCDRIGDSSYLRADYSLECFTALYYRYQIYAAVMIFVYPVGIPFLLGWWLFRHREELQAGQA----TYRVSPAADLWGPYKPTRYYYEVVECFRRVALTGTGVFIHPDSAAQIAIVLVLATFFMVISEGLSPFCRATEMWLYRAGNYVIFASMYLALLLKLDVSDEDDQSQEVFSGLLVTFHVVMILGVLGQGLLVFTDWQREQQQEENAAGAALPSKLGKTVAKRRRITFAGGI 3836
S V P KF C F +N+A A GG + S A D I XXXXXXXXXXXXXXX N F C F LE + GD F VC C AC G + +VP C + +T P T++TL+++PGY+R + +S + C+ DAC GGV + YC Y+GPYC++C YA ++C C S G A G+AVV+ ++ VV + + + ++ V R G W PL +VKIV+V WQIVTQF+ + V YP Y +F+ ++V DLG+LLS CV +F+ RL+ ATI P + L TY A R N A L +I ++H+ + LL+ F+VY++VS TLF F CD + D +YLR DY +EC ++ + +Q+YA MI +YP+GIP L LFR RE L+ +A + RV ++LW PYKP+ +YYEV+EC RRV LTG VFI+P++AAQ+AI L++A FF ++SE +SP+ E W+ R G+ V+ S+Y+ALLLK+DVSDE SQ VF +LVT H MIL V+ + +V W+++ +++ +P++ +R + F GG+
Sbjct: 875 SPVVPTKFNRCRFIDNVATASGGAVDSAAGQD-IVVNSVFKGNSAEVGGALRXXXXXXXXXXXXXXXVSGHQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLF-LEFDTS-GDG---TFEAVCDGCRVACD------GCSFDEQPAVPTCSDVMDHSTSPGGNVTLETLLIDPGYWRATSSSKKILPCYNADACLGGVTGTAGYCLESYEGPYCSICSNGYASNLGYSCSKCFSRS----------GGIAFAVGLAVVAVFVAVVVIRYIMSGEAGER---RIYVFERLG-WY-VPLQSVKIVIVSWQIVTQFASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINRE------------------------------------------------------------------------------ANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRQKLRED-------VPARF-----RRGKFLFRGGV 1489
BLAST of mRNA_P-littoralis_Contig11.88.4 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 324 bits (831), Expect = 2.360e-86 Identity = 220/649 (33.90%), Postives = 329/649 (50.69%), Query Frame = 3
Query: 1935 NTFYCDIGTFSLEVSIAEGDDDTCRFGEVCSRCSSACGSVLEEAGATMGRSESVPYCEAAPEGTTMPTKGGTIQTLVVEPGYFRHSLTSTDLKECFYEDACQGGVL-LSEYCASGYKGPYCAVCEENYAQGYQHTCKSCVGESKRNAYIAIAIAGAAVLTGMAVVSAWLVSVVEPSLDAKNQPSKWTQQLVVVWRGGVWQKFPLAAVKIVVVMWQIVTQFSDMSGVDYPSPYDEFLSYVEVVNLDLGFLLSFACVYRTNFYNRLMIATISPAITLAALGCTYLVALRRNXXXXXXXXGAASFHFAATVSAPKFPPPTSLSAPTSPPESRDVLTSLGYTSELGATNSPQDSLPIKGEGSGEEQGQQKDATAEAVLTVIRNRHMSMALLVVFVVYATVSHTLFGAFVCDRIGDS-SYLRADYSLECFTALYYRYQIYAAVMIFVYPVGIPFLLGWWLFRHREELQAGQAT-----YRVSPAADLWGPYKPTRYYYEVVECFRRVALTGTGVFIHPDSAAQIAIVLVLATFFMVISEGLSPFCRATEMWLYRAGNYVIFASMYLALLLKLDVSDEDDQSQEVFSGLLVTFHVVMILGVLGQGLLVFTDWQREQQQEENAAGAALPSKLGKTVAKRRRI-TFAGGIRPNDENT 3857
N F C GTF + A+ F VC+ C +AC G VP C E +T T++TL ++ GY+R + + T++ C++ DAC GGV S YC GY+GPYCA+C E Y+ TC++C + IA+A A + G+ ++ A + V + K + +V R G + PL +VKIVVV WQI+TQF++++ V YP Y FL+ +EV N DL ++LS CV +F++RL++ATI P L CTY A+R + GAT + L +R++H+ M LL+ F VY++VS TLF F C+ + D +YL ADY +EC ++ + R+++YA M+ +Y GIP L + LFR R+ L+ +A R + +DLW PYKP+ +YYEVVEC RRV L G VFI+P+S+AQIAI L++A F++ISEGL+P+ + W+ R G+ V+ ASMYLALLLK+DVS E SQ VF +LV HVVM++ + + L++ + E++++++ LP AK + + G P +N+
Sbjct: 1092 NGFDCPSGTFLGYNASAD------LFEAVCNGCQTAC------VGCAFADPLLVPTCTDLLEHSTSSDGRDTLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAG-----GIALAAALAVVGLVLLVAVVSYVSSGERNGKGRG--------IVERVG--RYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHR---------------------------------------------------GATET---------------------------LENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAERRRDQHLQEDRLPRFRSSGKAKAMQTHKWNAGTMPEPDNS 1635
BLAST of mRNA_P-littoralis_Contig11.88.4 vs. uniprot
Match: D7FRV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV1_ECTSI) HSP 1 Score: 317 bits (813), Expect = 3.160e-86 Identity = 226/678 (33.33%), Postives = 318/678 (46.90%), Query Frame = 3
Query: 1668 PVKFLGCTFQENIALADGGGIYSVADHDSIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTFYCDIGTFSLEVSIAEGDDDTCRFGEVCSRCSSACGSVLEEAGATMGRSESVPYCEAAPEGTTMPTKGGTIQTLVVEPGYFRHSLTSTDLKECFYEDACQGGVL-LSEYCASGYKGPYCAVCEENYAQGYQHTCKSCVGESKRNAYIAIAIAGAAVLTGMAVVSAWLVSVVEPSLDAKNQPSKWTQQLVVVWRGGVWQKFPLAAVKIVVVMWQIVTQFSDMSGVDYPSPYDEFLSYVEVVNLDLGFLLSFACVYRTNFYNRLMIATISPAITLAALGCTYLVALRRNXXXXXXXXGAASFHFAATVSAPKFPPPTSLSAPTSPPESRDVLTSLGYTSELGATNSPQDSLPIKGEGSGEEQGQQKDATAEAVLTVIRNRHMSMALLVVFVVYATVSHTLFGAFVCDRIGDS-SYLRADYSLECFTALYYRYQIYAAVMIFVYPVGIPFLLGWWLFRHREELQAG---QATYRVSPAADLWGPYKPTRYYYEVVECFRRVALTGTGVFIHPDSAAQIAIVLVLATFFMVISEGLSPFCRATEMWLYRAGNYVIFASMYLALLLKLDVSDEDDQSQEVFSGLLVTFHVVM 3686
P F GC F +N A GG I S + DSI+ N C G+F ++ +EG R+ VC C +A + G TMG VP C E T +I+ + ++PGY+R + T+T + C+ DAC GG+ + YC GY GPYCA+C ENY + C C S + + A + G A+V A+LVS + L+V+ V K ++KIVVV+WQI+TQFSD++ V YP Y FL ++V+N D+G+++S CV +F++ L+ ATI P I + LG TY A RN + EA+ V R +H+S LLV F+VY++VS T+F FVCD + DS SYLRADYS++C + + QI+A M+ +YPVGIP G L+ RE L+ G QA + + LW PY P RYY EVVEC RR+ LTG VFI+P+SAAQIAI L++ F+VISE L+PF A + W+ R G+ +IF +M++ALLLK+DVSDE + SQ +F+G+LV ++V+
Sbjct: 435 PTTFAGCYFADNFADLSGGAIDSSSGDDSIESSDFISNKAVIGGALRLAGNDVSIKYCTFDGNAAGTVDGGPAVSNVGDLDVWNSVFRRNYIECPPGSF-VDYYESEGG----RYEAVCDGCPAA------DDGITMGVENLVPTCTETLENTRSDGANTSIEDIRIDPGYWRATTTTTTVLACYNADACLGGITGEAGYCREGYYGPYCAICTENYGRTMAFECTKC--SSGEGVAVGVIFVSALAVGGAALV-AYLVS--------NEREGXXXXXLIVL----VKDKVSFRSLKIVVVVWQILTQFSDVANVTYPHIYQRFLDVIDVLNFDIGWVISAGCVVDFDFHDHLLTATIGPIIVVGVLGATYAAASYRNR-----------------------------------------------------------------------------GSDEAIARVFR-KHVSAVLLVTFLVYSSVSSTVFRMFVCDPLADSNSYLRADYSIQCSSTKHRALQIFAVFMVLLYPVGIPLFYGILLYNTREALKDGSCRQAHPQAKTISALWEPYTPKRYYNEVVECGRRMLLTGVVVFIYPNSAAQIAISLLMTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILVVTNLVL 1008 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig11.88.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig11.88.4 >prot_P-littoralis_Contig11.88.4 ID=prot_P-littoralis_Contig11.88.4|Name=mRNA_P-littoralis_Contig11.88.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1445bp MDRHHYHSHRRHRLLPALLNLLVVAFLTVPTVRSRRRLDEDGLCRFTATSback to top mRNA from alignment at P-littoralis_Contig11:471184..534876+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig11.88.4 ID=mRNA_P-littoralis_Contig11.88.4|Name=mRNA_P-littoralis_Contig11.88.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=63693bp|location=Sequence derived from alignment at P-littoralis_Contig11:471184..534876+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig11:471184..534876+ >mRNA_P-littoralis_Contig11.88.4 ID=mRNA_P-littoralis_Contig11.88.4|Name=mRNA_P-littoralis_Contig11.88.4|organism=Pylaiella littoralis U1_48|type=CDS|length=4335bp|location=Sequence derived from alignment at P-littoralis_Contig11:471184..534876+ (Pylaiella littoralis U1_48)back to top |