prot_P-littoralis_Contig11.43.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig11.43.3
Unique Nameprot_P-littoralis_Contig11.43.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1268
Homology
BLAST of mRNA_P-littoralis_Contig11.43.3 vs. uniprot
Match: A0A6H5L1V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V4_9PHAE)

HSP 1 Score: 699 bits (1803), Expect = 2.520e-229
Identity = 692/1234 (56.08%), Postives = 772/1234 (62.56%), Query Frame = 0
Query:   64 MGTELSKQQ--QGGEDEDEALDARSTTATTLPLP---LVAEKWHDWLQGAESLYIQGRFRAYQKALRKDAPSLPSDPMAAALLKAVARANAAIGRHAEASRVSSGLQGGGXXXXXXXXXGVVRGEGKGVPVGDDGNKNSEARDASLASLEKALRETVDVALQATSSSSXXXXXXXXXXXXXXADAXGXXXXTXXXXXXXXXXXXXXXXXXXXXXXGARQASGLRARPGVAVIAAAAEDVAVQVACAVMATRLAQGEPTKAVSVGLRLLARRQTTVAAAAFVFAEVGAAHVNDETVGPETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQQDGKCKAARDVFFGVDALRKAFESALSGPAIGGRRLPLQEAAPRLLHLLRLSWLLAVANLALGRAAVAAQFVLVAETAYGTRPSAWRKASFLLATHPPGGASAAYAPRSRCLGLVAASXXXXXXXXXXXXXXXXXXXXXXXXXRDPALSMCRFLRGLALLAQGDLESAAGRLEESLELDPRNRHATVCLAHTYCFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQRQRWKPSDERIRELLRLLSLGASAHFESAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYGGGVETWVLLACVARARGDAGGAVSMFRRVLALDPHCLEAVYGIARVLQESGDHATSRDLLLFLGERSQEISSSIGDDNPTTXXXXXXXRGGSESGSGSSCHGRPSPRERRRSHLCFPLDIDAGGRRPGIREDRSWIGGXXXXXXXXXXAAMLPVATAEVMWRVARASMGAKDWSTAILALRGLAAELLSRATSPFPKKDNAQLFFFASSRKGGDGFSASPGPARARVLRALAFCQIQRGLYRDALETTSEGLGRAAGXXXXXXXXXXXXXXXM----------LMLRADALLCLEEGEAVVEASLDRATQLLNLRQIDMSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPRDLAVDRDRRLARSAAFNNRAVLLVAAGRGEEACRLLRACLLLLPGEPRPVFNLTLALWRLGRRRAACAHWLEARGWLGDVGGXXXXXXXXXXXXXMANTEAFAKLLDSACRRKALLKPDAAVRRNTYGGGQGNPSSSSFPTAGF-------------HVTEGEG-DPLSLPPLQLCLLDIRCLTWWIDNDL 1268
            MGTELSKQQ  +GG++                 P   +V  +W  WLQGAE L++QG+FRA+Q+AL+ D P LP++P+AA+LLKAVA+ANAAIG HAEAS   S      XXXXXXXXX     E               AR+AS+A LE ALRE V+VA+QAT SSS              A +                                 +A+ LR    VA++AAAAEDVAVQ ACA+MA RLAQGE T A                                    P+T        XXXXXXXXXXXXXXXXXXXXXXXX        AARDVF+GVDALR+AF SAL GP  GG+RLPL EAAPRLLHLLR+SWLLAVANLALGRAA A++ V VAE AYG R SAWR+AS LL+T P G ASAAY P      L                 XXXXXXXXXXXX DPAL+MCRFLRGL  LAQGDLE+AAGRLEESL+LDPRNRHATVCLAH  CFA+                                 RWKPSDER  ELLR+LSLG+SAHF+S EQ      XXXXXXXXXXXXXXXXXXXXXXXXXXXXX         VE W+LLAC ARA G+AG AVSMFRR LALDP CLEAVYG+ARVLQESGDHA SR+LLLFLGERSQE+S   G   P++         G  + S SS H         +  LCFPL+    G +PG          XXXXXX      +LPVA AEVMWRVARASM A+DW TAILAL GL A   +      P++  A  ++FAS  KGG   ++  GP RARVLRALA+ QIQRGLYRDALET    LG  +GXXXXXXXXXXXXXXX           LMLRADALLCLEE E     SLDRA +LL  RQ+D+S+P     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            LAR+AAFNNRAVLL+A GRGEEACRLLRACLLLLP EPRP FN +LALWRLGRRR ACAHWLEAR WLG  GG                 EA+ KLL+SA RRK  L+ DA  + N  GG   +                        HVTEG G DPLSLP +Q+CLLDIRCLTWW+DN+L
Sbjct:    1 MGTELSKQQCREGGDNNGXXXXXXXXXXXXXKAPTTQVVVGEWAGWLQGAEVLFLQGKFRAFQEALQNDVPPLPTEPLAASLLKAVAKANAAIGGHAEASLSLSSTGXXXXXXXXXXXXXXXXXE--------------AAREASIAGLEVALREAVEVAVQATCSSSATSPSSLLPPTPAAAGS---------------------------------EAADLR----VALLAAAAEDVAVQAACALMAARLAQGEGTAA-----------------------------------DPDTPASIASNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AARDVFWGVDALREAFGSALKGPGAGGKRLPLSEAAPRLLHLLRMSWLLAVANLALGRAAAASRIVCVAEHAYGARRSAWRRASLLLSTRPTG-ASAAYTPXXXXAPL---HPLGAATSKHGGVGXXXXXXXXXXXXNDPALAMCRFLRGLGSLAQGDLEAAAGRLEESLDLDPRNRHATVCLAHISCFASASPATTSL-------------------------RWKPSDERTHELLRVLSLGSSAHFDSIEQEILLRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------VEAWLLLACAARATGNAGEAVSMFRRALALDPQCLEAVYGVARVLQESGDHAASRELLLFLGERSQELS---GGSLPSSNGATSAVHQGRRNSSRSSSH---------QHRLCFPLEARRQGFQPGGXXXXXXX--XXXXXXASGALTVLPVALAEVMWRVARASMAARDWPTAILALEGLVAAEATAGGEASPREGLA--YYFASFAKGGGARASRRGPGRARVLRALAYSQIQRGLYRDALETVGTVLGDGSGXXXXXXXXXXXXXXXXXXXXXXXXXXLMLRADALLCLEEDETCAGDSLDRALRLLARRQVDLSVPPPSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------LARAAAFNNRAVLLIAFGRGEEACRLLRACLLLLPEEPRPTFNFSLALWRLGRRRDACAHWLEARRWLGVGGG---------------RREAYVKLLESARRRKLSLQSDAVNKANKTGGHGDSXXXXXXXXXXXXXXXXXXXXXVTSHVTEGSGGDPLSLPQIQVCLLDIRCLTWWLDNNL 1071          
BLAST of mRNA_P-littoralis_Contig11.43.3 vs. uniprot
Match: D7FTU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU3_ECTSI)

HSP 1 Score: 529 bits (1363), Expect = 3.530e-167
Identity = 444/839 (52.92%), Postives = 510/839 (60.79%), Query Frame = 0
Query:  111 LYIQGRFRAYQKALRKDAPSLPSDPMAAALLKAVARANAAIGRHAEASRVSSGLQGGGXXXXXXXXXGVVRGEGKGVPVGDDGNKNSEARDASLASLEKALRETVDVALQATSSSSXXXXXXXXXXXXXXADAXGXXXXTXXXXXXXXXXXXXXXXXXXXXXXGARQASGLRARPGVAVIAAAAEDVAVQVACAVMATRLAQGEPTKAVSVGLRLLARRQTTVAAAAFVFAEVGAAHVNDETVGPETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQQDGKCKAARDVFFGVDALRKAFESALSGPAIGGRRLPLQEAAPRLLHLLRLSWLLAVANLALGRAAVAAQFVLVAETAYGTRPSAWRKASFLLATHPPGGASAAYA---PRSRCLGLVAASXXXXXXXXXXXXXXXXXXXXXXXXXRDPALSMCRFLRGLALLAQGDLESAAGRLEESLELDPRNRHATVCLAHTYCFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQRQRWKPSDERIRELLRLLSLGASAHFESAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYGGGVETWVLLACVARARGDAGGAVSMFRRVLALDPHCLEAVYGIARVLQESGDHATSRDLLLFLGERSQEISSSIGDDNPTTXXXXXXXRGGSESGSGSSCHGRPSPRERRRSHLCFPLDIDAGGRRPGIREDRSWIGGXXXXXXXXXXAAMLPVATAEVMWRVARASMGAKDWSTAILALRGLAAELLSRATSPFPKKDNAQL-FFFASSRKGGDGFSASPGPARARVLRALAFCQIQRGLYRDALETTSEGLG 945
            LY+QG+FRA+Q+AL+ D P LP++P+AA+LLKAVA+ANAAIG HAEAS   S   G G           V G   G   G DG+  + AR+ S A LE ALRE V+VA++AT +SS              A                                   +A+GL    GVA++AAAAEDVAVQ ACA+MA RLAQGEP KA+SVG+R+LA R+ T++AA                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +Q+ K +AARDVF+GVDALR+AF SAL GP  GG+RLPL EAAPRLLHLLR+SWLLAVANLALGRAA A++ V VAE AYG R SAWR+AS LL+T P G ASA Y    P +    L  A+              XXXX       RDPAL+MCRFLRGL  LAQGDLE+AAGRLEESL+LDPRNRHATVCLAH  CFA+                                  W+PSDER  ELLR+LSLG+SAHF+S EQ      XXXXXXXXXXXXXXXX         XXXXXX       VE WVLLAC ARA G+AG AVSMFRR LALDP CLEAVYG+ARVLQESGDHA SR+LLLFLGERSQE+S   G  +P++         G  S S SS H         +  LCFPL+    G +P         G             +LPVA AEVMWRVARASM AKDW TAILAL GL A   + AT+         L ++FAS  K G   ++  GP RARVLRALAF QIQRGLYRDALET    LG
Sbjct:    2 LYLQGKFRAFQEALQNDVPPLPTEPLAASLLKAVAKANAAIGGHAEASLFLSSTGGAGGTGSE------VAG---GRHGGGDGDSEA-AREDSTAGLEAALREAVEVAVKATCASSATSPSSLLPPIPAAAGT---------------------------------EAAGL----GVALLAAAAEDVAVQAACALMAARLAQGEPAKALSVGVRVLASRKATISAAXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKQEEK-EAARDVFWGVDALREAFGSALKGPGAGGKRLPLSEAAPRLLHLLRMSWLLAVANLALGRAAAASRLVSVAEHAYGARRSAWRRASLLLSTRPTG-ASATYTAPPPPAPLHPLAPATSKQGGGGSANGTLRXXXXG------RDPALAMCRFLRGLGSLAQGDLEAAAGRLEESLDLDPRNRHATVCLAHISCFASASPATTTTSLG-----------------------WEPSDERTHELLRVLSLGSSAHFDSIEQEILLRGXXXXXXXXXXXXXXXXEAGRCMWRAXXXXXX-------VEAWVLLACAARATGNAGEAVSMFRRALALDPQCLEAVYGVARVLQESGDHAASRELLLFLGERSQELS---GGSSPSSNGATSAVHQGRRSSSRSSSH---------QHRLCFPLEATRQGFQPSGGGXXXXXGAL----------VVLPVAPAEVMWRVARASMAAKDWPTAILALEGLVA---AEATADGVASSREGLAYYFASFAKDGGARASRRGPGRARVLRALAFSQIQRGLYRDALETVRMVLG 722          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig11.43.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L1V4_9PHAE2.520e-22956.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTU3_ECTSI3.530e-16752.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 540..573
e-value: 0.19
score: 20.8
coord: 1104..1137
e-value: 45.0
score: 9.2
coord: 917..950
e-value: 260.0
score: 2.5
coord: 695..728
e-value: 0.49
score: 19.4
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 695..728
score: 8.2899
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 540..573
score: 8.9389
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 445..762
e-value: 7.4E-13
score: 50.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1093..1196
e-value: 4.4E-6
score: 28.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 914..1157
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 544..1160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 597..627
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 601..619
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1001..1023
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1048..1063
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 763..793
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 351..392
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 763..808
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 656..689
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 997..1096
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1064..1080
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1027..1047
IPR039684Fanconi anemia group G proteinPANTHERPTHR15254FANCONI ANEMIA GROUP G PROTEIN FAMILY MEMBERcoord: 963..1166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig11contigP-littoralis_Contig11:277701..295319 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig11.43.3mRNA_P-littoralis_Contig11.43.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig11 277701..295319 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig11.43.3 ID=prot_P-littoralis_Contig11.43.3|Name=mRNA_P-littoralis_Contig11.43.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1268bp
TDRQTRKVHRFSASLTACVLLSCVLTFSSHTQSSHYRAETYREVVWLARE
FACNQCNPKRGLIMGTELSKQQQGGEDEDEALDARSTTATTLPLPLVAEK
WHDWLQGAESLYIQGRFRAYQKALRKDAPSLPSDPMAAALLKAVARANAA
IGRHAEASRVSSGLQGGGGGGGGGGVGGVVRGEGKGVPVGDDGNKNSEAR
DASLASLEKALRETVDVALQATSSSSSLAAAAGAAGAAGAADAAGAGAAT
SSAAAGAASSSCAAAGRSSPIGAGARQASGLRARPGVAVIAAAAEDVAVQ
VACAVMATRLAQGEPTKAVSVGLRLLARRQTTVAAAAFVFAEVGAAHVND
ETVGPETTTTATRGGGGGSRRGRQDSSGGGGGGGGGGGERQQDGKCKAAR
DVFFGVDALRKAFESALSGPAIGGRRLPLQEAAPRLLHLLRLSWLLAVAN
LALGRAAVAAQFVLVAETAYGTRPSAWRKASFLLATHPPGGASAAYAPRS
RCLGLVAASARASANGNCGRGLGGAGARAGAGAGRDPALSMCRFLRGLAL
LAQGDLESAAGRLEESLELDPRNRHATVCLAHTYCFAAAAAAAAPAGGGG
DGGLPPPPPQLPPPTTTPQRQRWKPSDERIRELLRLLSLGASAHFESAEQ
QELLLRGGGSRAGGERRQAAAKGEEEEEDSAGSGGGGGGEYGGGVETWVL
LACVARARGDAGGAVSMFRRVLALDPHCLEAVYGIARVLQESGDHATSRD
LLLFLGERSQEISSSIGDDNPTTTTTTKNSRGGSESGSGSSCHGRPSPRE
RRRSHLCFPLDIDAGGRRPGIREDRSWIGGGGGGGGGAAGAAMLPVATAE
VMWRVARASMGAKDWSTAILALRGLAAELLSRATSPFPKKDNAQLFFFAS
SRKGGDGFSASPGPARARVLRALAFCQIQRGLYRDALETTSEGLGRAAGG
SSGGGGAAEGDDAAMLMLRADALLCLEEGEAVVEASLDRATQLLNLRQID
MSLPPPPPPRSSSSSPPPPPAIRTTAARRRQQEQQQQQKQQSAVTITLTT
PPPPPPPPPYPGNNNNNNNNNNNTNSGENEGVVAPPPPHPRDLAVDRDRR
LARSAAFNNRAVLLVAAGRGEEACRLLRACLLLLPGEPRPVFNLTLALWR
LGRRRAACAHWLEARGWLGDVGGGGAGGGGGGGGGGMANTEAFAKLLDSA
CRRKALLKPDAAVRRNTYGGGQGNPSSSSFPTAGFHVTEGEGDPLSLPPL
QLCLLDIRCLTWWIDNDL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR039684FANCG