prot_P-littoralis_Contig11.42.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig11.42.1
Unique Nameprot_P-littoralis_Contig11.42.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length504
Homology
BLAST of mRNA_P-littoralis_Contig11.42.1 vs. uniprot
Match: A0A6H5L882_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L882_9PHAE)

HSP 1 Score: 324 bits (830), Expect = 6.030e-99
Identity = 260/502 (51.79%), Postives = 282/502 (56.18%), Query Frame = 0
Query:    1 MLHMQLHILGRLSFEESQELLRRAEN------ANAGESASSDVERPPAAPXXXXXXXXXXRIPVLAEGGCSRSTEGXXXXXXXXXXGMAGLALSMEARHALLSSTYEHVLGDGLRALVRDVERAVSRCTCSWRAHTRQQVEFQDLVAVIRRVRREIEGPIGGTDYHASVG----VGRGLGEEFVRPSGVRHALLLRYIINPSDGIGGASXXXXXXXXXXXXXXXAREAPANGAXXXXXXXXXXXXXXXXXXXXXXXXXATQA------LEGVGEVLDETWDTAESPNFAAALQAR-------ISRHFWRC-------------------ISCLDTTFGIVYEQLRQKVFCRGSPGGRQRKXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAAWPPSEPAG------IXXXXXXXXXXXXXXXXXXXXXAEEAAAGGACL---VAAPAVAETEESAQVLATVISQAKLVVSDILEPSAHANEYAHAVASLSSVEDLCLSVFGDG 451
            MLHMQLHILGRLS EESQELL R  N       ++ E+A+S     P             R  V A     R   G            AGLALSME RH+LLS+TYEHVLGDGLR LVRDVERAVSRCTCSW+AHTRQQVEFQDLVAVIRRVRRE+EGPIGG+ Y+   G    VG  +GE   R SG+RHALLLRYIINPSDGIGG +                     NG+                                   L+GVGEVL+ETWDTAESPNF AALQAR       +    W                     +SCLD TFG+VYEQLRQK FCRGS  G    XXXXXXXXXXXXX              GRAA  PSEP         XXXXXXXXXXXX         A  AA GG  +    AAPAVAE EESAQVLATVISQAKLVVS+ILE S   NEYA AVASL SV+DLC SVF  G
Sbjct:  189 MLHMQLHILGRLSLEESQELLLRTSNDDDITPGSSTETAASLPHGNPGTMSSPSPLTTTTRNGVPAPPAAVRLGAGASDWSGGAVT--AGLALSMEGRHSLLSATYEHVLGDGLRTLVRDVERAVSRCTCSWKAHTRQQVEFQDLVAVIRRVRREVEGPIGGSAYYGGGGDFNGVGGAVGEGLGRSSGIRHALLLRYIINPSDGIGGIAAAATTAAPAPTNDTTLEGVIVNGSVTDTASAGSTAGGRNGGVSSLGGGAGVGGTASGTLLQGVGEVLNETWDTAESPNFGAALQARQPAARKTLYLTVWNTYVLFRDTSLGLKLSTGVVEVSCLDATFGMVYEQLRQKAFCRGSTTGXXXXXXXXXXXXXXXXXDVGG----------GRAAGLPSEPTAPXXXXXXXXXXXXXXXXXXSGGLPAGVAAAHAAGGGGAVGFVAAAPAVAEREESAQVLATVISQAKLVVSEILEASP-GNEYAQAVASLPSVQDLCFSVFSGG 677          
BLAST of mRNA_P-littoralis_Contig11.42.1 vs. uniprot
Match: D7FTT5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT5_ECTSI)

HSP 1 Score: 281 bits (720), Expect = 2.120e-86
Identity = 233/381 (61.15%), Postives = 244/381 (64.04%), Query Frame = 0
Query:   89 MEARHALLSSTYEHVLGDGLRALVRDVERAVSRCTCSWRAHTRQQVEFQDLVAVIRRVRREIEGPIGGTDYHASV--------GVGRGLGEEFVRPSGVRHALLLRYIINPSDGIGGASXXXXXXXXXXXXXXXAREAPANGAXXXXXXXXXXXXXXXXXXXXXXXXXATQA----LEGVGEVLDETWDTAESPNFAAALQARISRHFWRCISCLDTTFGIVYEQLRQKVFCRGSPGGRQRKXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAAWPPSEPAGIXXXXXXXXXXXXXXXXXXXXXAEEAAAGGACLVA---------APAVAETEESAQVLATVISQAKLVVSDILEPSAHANEYAHAVASLSSVEDLCLSVF 448
            MEARH+LLSSTYEHVLG GLRALVRDVERAVSRCTCSW+AHTRQQVEFQDLVAVIRRVRRE+EGPIGG+ Y+            VG GLG    R SGVRHALLLRYIINPSDGIGG +                     NG                     XXXXX   A    L+GVG+VLDETWDTAESPNFAAALQ           SCLD TFG+VYEQLRQK FCRGS       XXXXXXXXXXXXXXXXXXXXX        AA PPSEP   XXXXXXXXXXXXXXX                            APAVAE EESAQVLATVISQAKLVVS+ILE S   NEYAHAVASL SV+DLC SVF
Sbjct:    1 MEARHSLLSSTYEHVLGGGLRALVRDVERAVSRCTCSWKAHTRQQVEFQDLVAVIRRVRREVEGPIGGSAYYGGXXXXXXXXXAVGEGLG----RSSGVRHALLLRYIINPSDGIGGMAAAATTTAPAPTNDTTLEGIVVNGTASASAGATAEGRNGGVSSLGXXXXXXXTAGGTLLQGVGKVLDETWDTAESPNFAAALQ-----------SCLDATFGMVYEQLRQKAFCRGSTTXXXXXXXXXXXXXXXXXXXXXXXXXX--------AAGPPSEPKAXXXXXXXXXXXXXXXXSGDGGGLPAGXXXXXXXXXXXXXXXXXXAPAVAEREESAQVLATVISQAKLVVSEILEASP-GNEYAHAVASLPSVQDLCFSVF 357          
BLAST of mRNA_P-littoralis_Contig11.42.1 vs. uniprot
Match: A0A835Z151_9STRA (Peroxin-3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z151_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.090e-21
Identity = 112/315 (35.56%), Postives = 148/315 (46.98%), Query Frame = 0
Query:    1 MLHMQLHILGRLSFEESQELLRRAENANAGESASSDVERPPAAPXXXXXXXXXXRIPVLAEGGCSRSTEGXXXXXXXXXXGMAGLALSMEARHALLSSTYEHVLGDGLRALVRDVERAVSRCTCSWRAHTRQQVEFQDLVAVIRRVRREIEGPIGGTDYHASVGVGRGLGEEFVRPSGVRHALLLRYIINPSDGIGGASXXXXXXXXXXXXXXX--------AREAPANGAXXXXXXXXXXXXXXXXXXXXXXXXXATQALEGVGEVLDETWDTAESPNFAAALQARISRHFWRCISCLDTTFGIVYEQLRQKVF 307
            ML +Q+HILGR S+EE+ ELL+R     AG+                     XX      E G                    G +L M+AR A LSSTYE +LGDGLRAL  DVE AV  C+  W   ++  V +++L  ++RRVR E+EG +GG    A      G  +    P       LLRYIINP D +  A XXXXXXXXXXXXXXX        +  +PAN                      X    + +A   V  +L+ETWD  ESPNF+ A++            CLD  F ++Y ++R++VF
Sbjct:  161 MLRLQMHILGRYSYEEASELLKR----EAGQKQQPGTXX-------------XXXXXXXXERG-------------------VGASLPMDARRAFLSSTYEFLLGDGLRALAADVEAAVRTCSADWHCQSKLAVGWEELAGMLRRVRAEVEGGVGGAAAAA------GDAQAAQDP-------LLRYIINPIDELPAAXXXXXXXXXXXXXXXXXXXXXXLSSGASPAN-------------PLQRPPAQPXSPPLSPRAQGQVRMMLNETWDVVESPNFSLAMK-----------DCLDCAFDVLYRRMRERVF 402          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig11.42.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L882_9PHAE6.030e-9951.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTT5_ECTSI2.120e-8661.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z151_9STRA1.090e-2135.56Peroxin-3 n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..333
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 225..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..380
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 473..504
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig11contigP-littoralis_Contig11:273876..304411 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig11.42.1mRNA_P-littoralis_Contig11.42.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig11 273876..318877 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig11.42.1 ID=prot_P-littoralis_Contig11.42.1|Name=mRNA_P-littoralis_Contig11.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=504bp
MLHMQLHILGRLSFEESQELLRRAENANAGESASSDVERPPAAPATTTTT
TTTTRIPVLAEGGCSRSTEGDGGGSGSGSGGMAGLALSMEARHALLSSTY
EHVLGDGLRALVRDVERAVSRCTCSWRAHTRQQVEFQDLVAVIRRVRREI
EGPIGGTDYHASVGVGRGLGEEFVRPSGVRHALLLRYIINPSDGIGGASA
ATTTAAASASAAAAAREAPANGATTSGCAADAADSGSPDPAPGSTSEGAT
QALEGVGEVLDETWDTAESPNFAAALQARISRHFWRCISCLDTTFGIVYE
QLRQKVFCRGSPGGRQRKQQQQQQQQREVTVGAGASINGSEGAGGGRAAW
PPSEPAGIGAGPAAAAGDGGEQAPAPAPAAEEAAAGGACLVAAPAVAETE
ESAQVLATVISQAKLVVSDILEPSAHANEYAHAVASLSSVEDLCLSVFGD
GGGREAAAAAAAAAAAAAAAVGGMEEGRGRRETHRRRQQRRTSGGGGGGR
GGGG
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