prot_P-littoralis_Contig11.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig11.4.1
Unique Nameprot_P-littoralis_Contig11.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length91
Homology
BLAST of mRNA_P-littoralis_Contig11.4.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 2.630e-27
Identity = 58/97 (59.79%), Postives = 68/97 (70.10%), Query Frame = 0
Query:    1 VGGTAVHSVRQAGGRGGSGNLSGNHDSQKPLSDGMAMHWKGAVALAIEEVSMVGCELMVALNKAAGEIFPMHKSSPFGNLT------VIFCGDFNQL 91
            VGGT +HSV Q G +   G+LS NHD Q P+ D  A+HWKG   LA+EEVSMVGCEL+VALNKAA  +FPMHK  PFGNL       ++ CG FNQL
Sbjct: 1479 VGGTTIHSVCQVGRKTFRGSLSRNHDDQSPMKDTQAIHWKGVNMLAVEEVSMVGCELLVALNKAACSMFPMHKDKPFGNLQPFGNLPLVLCGGFNQL 1575          
BLAST of mRNA_P-littoralis_Contig11.4.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 3.590e-27
Identity = 58/91 (63.74%), Postives = 66/91 (72.53%), Query Frame = 0
Query:    1 VGGTAVHSVRQAGGRGGSGNLSGNHDSQKPLSDGMAMHWKGAVALAIEEVSMVGCELMVALNKAAGEIFPMHKSSPFGNLTVIFCGDFNQL 91
            VGGT VHSV   G R G GNLSG+HD Q  L D  AMHWKG   LAIEEVSMVGC L+V L+KAA  +FP+HK+ PFGN  V+  GDF+QL
Sbjct: 1579 VGGTTVHSVCSTGSRDG-GNLSGDHDDQSSLPDAKAMHWKGVSVLAIEEVSMVGCNLLVQLHKAACSMFPIHKAKPFGNRVVVMLGDFHQL 1668          
BLAST of mRNA_P-littoralis_Contig11.4.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 7.070e-25
Identity = 51/91 (56.04%), Postives = 66/91 (72.53%), Query Frame = 0
Query:    1 VGGTAVHSVRQAGGRGGSGNLSGNHDSQKPLSDGMAMHWKGAVALAIEEVSMVGCELMVALNKAAGEIFPMHKSSPFGNLTVIFCGDFNQL 91
            VGGT +HSV    GR GSG    +HD QK L++  A+ W+G   LA++E SMVGCE+ +AL+KAA ++FPMHK  PFGN+  +FCGDFNQL
Sbjct: 1121 VGGTTIHSVCNVPGRKGSGGK--DHDDQKGLTEDQALSWEGKSVLAVKEASMVGCEMELALDKAACKVFPMHKDKPFGNMVAVFCGDFNQL 1209          
BLAST of mRNA_P-littoralis_Contig11.4.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 6.280e-19
Identity = 48/91 (52.75%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    1 VGGTAVHSVRQAGGRGGSGNLSGNHDSQKPLSDGMAMHWKGAVALAIEEVSMVGCELMVALNKAAGEIFPMHKSSPFGNLTVIFCGDFNQL 91
            VGGT VHSV         G LSG H+ Q  L    A HWKG V LAIEE+SM+ C L+V L+  A  +FP+HK  PFGN  V+  GDFNQL
Sbjct: 1815 VGGTTVHSVCPNTDDS-DGCLSGAHEGQSTLPASKAAHWKGDVVLAIEEISMISCNLLVRLHNTACSMFPLHKGQPFGNRVVVMLGDFNQL 1904          
BLAST of mRNA_P-littoralis_Contig11.4.1 vs. uniprot
Match: A0A6H5KXW4_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW4_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 1.990e-15
Identity = 47/92 (51.09%), Postives = 55/92 (59.78%), Query Frame = 0
Query:    1 VGGTAVHSVRQAGGRGGSGNLSGNHDSQKPLSDGMAMHWKGAVALAIEEVSMVGCELMVALNKAAGEIFPMHKSS-PFGNLTVIFCGDFNQL 91
            VGGT VHSV    G    G LSG H+ Q  L    A HW+  V LAIEE SM+ C L+V L+  A  +FP+HK   PFGN  V+  GDFNQL
Sbjct:  366 VGGTTVHSVCPNTGDS-YGCLSGAHEGQSTLPASEAAHWQRDVILAIEESSMISCNLLVRLHNTACSMFPLHKGQQPFGNRVVVMLGDFNQL 456          
BLAST of mRNA_P-littoralis_Contig11.4.1 vs. uniprot
Match: A0A8H5BTV0_9AGAR (ATP-dependent DNA helicase n=1 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H5BTV0_9AGAR)

HSP 1 Score: 50.4 bits (119), Expect = 4.040e-5
Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   27 SQKPLSDGMAMHWKGAVALAIEEVSMVGCELMVALNKAAGEIFPMHKSSPFGNLTVIFCGDFNQL 91
            S+K   D +A+ W+G   L I+EVSM+GC L++ ++ A   +     ++PFG + VIF GDF QL
Sbjct: 1335 SEKSKRDLIAL-WEGVDFLFIDEVSMIGCHLLLQISNAL--VDAKGNTAPFGGMNVIFAGDFAQL 1396          
BLAST of mRNA_P-littoralis_Contig11.4.1 vs. uniprot
Match: A0A8H5BD74_9AGAR (ATP-dependent DNA helicase n=1 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H5BD74_9AGAR)

HSP 1 Score: 49.7 bits (117), Expect = 7.550e-5
Identity = 26/65 (40.00%), Postives = 40/65 (61.54%), Query Frame = 0
Query:   27 SQKPLSDGMAMHWKGAVALAIEEVSMVGCELMVALNKAAGEIFPMHKSSPFGNLTVIFCGDFNQL 91
            S K   D +A+ W+G   L ++EVSM+GC L++ ++ A   +     ++PFG L +IF GDF QL
Sbjct: 1364 SDKSKRDLIAL-WEGVDFLFVDEVSMIGCRLLLEISNAL--VDAKGNTAPFGGLNIIFAGDFAQL 1425          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig11.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JN07_9PHAE2.630e-2759.79ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
D7G3U9_ECTSI3.590e-2763.74ATP-dependent DNA helicase n=2 Tax=Ectocarpus sili... [more]
A0A6H5K882_9PHAE7.070e-2556.04ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KIB1_9PHAE6.280e-1952.75ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KXW4_9PHAE1.990e-1551.09ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A8H5BTV0_9AGAR4.040e-541.54ATP-dependent DNA helicase n=1 Tax=Tulosesus angul... [more]
A0A8H5BD74_9AGAR7.550e-540.00ATP-dependent DNA helicase n=1 Tax=Tulosesus angul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 2..91
e-value: 1.1E-5
score: 26.9
IPR010285DNA helicase Pif1-likePFAMPF05970PIF1coord: 34..91
e-value: 1.2E-8
score: 34.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig11contigP-littoralis_Contig11:13266..13538 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig11.4.1mRNA_P-littoralis_Contig11.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig11 13266..13540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig11.4.1 ID=prot_P-littoralis_Contig11.4.1|Name=mRNA_P-littoralis_Contig11.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=91bp
VGGTAVHSVRQAGGRGGSGNLSGNHDSQKPLSDGMAMHWKGAVALAIEEV
SMVGCELMVALNKAAGEIFPMHKSSPFGNLTVIFCGDFNQL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR010285DNA_helicase_pif1-like