prot_P-littoralis_Contig1.229.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1.229.2
Unique Nameprot_P-littoralis_Contig1.229.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length856
Homology
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BLAST of mRNA_P-littoralis_Contig1.229.2 vs. uniprot
Match: D7FT26_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT26_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 1.120e-10
Identity = 43/75 (57.33%), Postives = 50/75 (66.67%), Query Frame = 0 
Query:  166 VRNVKRVDCSVGVRPPTRSSFRP-PADEVMNSDEVGVRL-STKRCGFRGCRKRPTYGTEGSKIAQFCSPHAEDGM 238
            VRNVKR D S G+R    S   P PA   +  D+ G +L STKRC F  CRKRPTYG EGSK A+FC+PHA+ GM
Sbjct:    4 VRNVKRHD-SFGLRMQASSLSLPSPASGDVGGDQPGGKLPSTKRCSFPQCRKRPTYGVEGSKTAEFCAPHAQPGM 77
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BLAST of mRNA_P-littoralis_Contig1.229.2 vs. uniprot
Match: A0A6H5JW94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW94_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 5.710e-5
Identity = 21/34 (61.76%), Postives = 26/34 (76.47%), Query Frame = 0 
Query:  206 KRCGFRGCRKRPTYGTEGSKIAQFCSPHAEDGMV 239
            KRCG  GC K+P++GT GSK A+FC PHA+  MV
Sbjct:    7 KRCGHPGCTKKPSFGTAGSKRAEFCCPHAKQDMV 40
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.229.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FT26_ECTSI1.120e-1057.33EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT26... [more]
A0A6H5JW94_9PHAE5.710e-561.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 208..241
e-value: 2.4E-7
score: 31.2
coord: 322..356
e-value: 4.4E-9
score: 36.7
coord: 628..660
e-value: 0.002
score: 18.7
coord: 551..585
e-value: 2.9E-9
score: 37.3
coord: 475..509
e-value: 8.2E-6
score: 26.3
coord: 133..167
e-value: 7.0E-8
score: 32.9
coord: 441..467
e-value: 0.11
score: 13.2
coord: 15..51
e-value: 1.0E-6
score: 29.2
coord: 95..128
e-value: 1.4E-6
score: 28.7
coord: 284..317
e-value: 6.5E-7
score: 29.8
coord: 56..89
e-value: 0.0093
score: 16.6
coord: 513..546
e-value: 2.4E-4
score: 21.6
coord: 590..623
e-value: 4.7E-7
score: 30.3
coord: 400..430
e-value: 0.66
score: 10.7
coord: 246..279
e-value: 1.5E-8
score: 35.0
NoneNo IPR availableGENE3D6.10.140.110coord: 567..607
e-value: 1.3E-5
score: 27.4
coord: 111..174
e-value: 7.0E-11
score: 44.2
coord: 608..669
e-value: 8.6E-8
score: 34.3
coord: 302..363
e-value: 4.6E-12
score: 48.0
coord: 224..262
e-value: 4.6E-7
score: 32.0
coord: 32..98
e-value: 2.4E-9
score: 39.3
coord: 263..301
e-value: 1.0E-8
score: 37.3
coord: 491..533
e-value: 4.2E-7
score: 32.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 751..801
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 662..681
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 802..855
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 748..855

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:1113759..1126832 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.229.2mRNA_P-littoralis_Contig1.229.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig1 1112350..1127122 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1.229.2 ID=prot_P-littoralis_Contig1.229.2|Name=mRNA_P-littoralis_Contig1.229.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=856bp
MPGSSQEVSGANGKCGYFDCPKRPTYGLVGTDGERRAQFCAPHAQPGMIN
VSKRRCAEAGCLNHPSYVMKGDKNSCFCLDHATEGMVDLHSYRACSRKGC
VKHPTYGIPGTRKAEFCAPHALEGMVNVSAKQCLQVDCSKQPSYGAPGTR
KAQFCVQHAQEGHVDVRNVKRVDCSVGVRPPTRSSFRPPADEVMNSDEVG
VRLSTKRCGFRGCRKRPTYGTEGSKIAQFCSPHAEDGMVNVSRRRCGELG
CVKHPSYGVRGSKTTEFCAQHARPGMVDVWGKRCAHPGCAKHPTYGVAGS
KRTEFCAPHATPGMVNVSAKRCGYVGCSKQPSFGFNGSRTAHFCVQHAED
GMVDVRNTKRCGHEKCPNHLTYGDDGTKMSDFCPFHSEDRVIVRVPSKRC
AHRGCTKQLVSPGASRGKAAQFCVQHAELGAGDVVNNSKECGHPAYTERL
AYGAAEFCARHAEDTMVAGAPDKRCAHPDCFKYPSYGRPGSKTPEFCVQH
ATKGMLDVRNKRCCHPDCPKHPTYGVAGTKTALFCAPHAKNGMLNVSAKK
CGWIDCTKQPSFGYSGSKTAHFCVQHAEDGMVDVRNVKRCCYPGCTKHPS
YGLAGSKRATFCAPHAENGMVNVLNRTCKNSLSCKKRPTYGKIGSRITDS
CKQHAVQGMVEVSSGKRRGEDDYGSSCSGSSSSEGGFSGGERFGAAFARK
YGRVKQEVPPYGADADGGSVSSAVPIASGLVVGDWVANGAVDGGWIGNGN
GNPNGDENRIGNGNGVENGNRNGNGNGIGIDDGNGNGSRSGTENGDKNYG
VEQENGQDEEHEEPKDWPAHFSTQRWRHTDNRDAAEGEPYMGLPKRRRTM
DDVYI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys