prot_P-littoralis_Contig1096.11.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1096.11.1
Unique Nameprot_P-littoralis_Contig1096.11.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length78
Homology
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BLAST of mRNA_P-littoralis_Contig1096.11.1 vs. uniprot
Match: A0A6H5KAW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW6_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 4.960e-14
Identity = 44/78 (56.41%), Postives = 53/78 (67.95%), Query Frame = 0 
Query:    3 SEMQQA--AVVARTLAGEATAALRARPQQSQLGIPLSKDLLWGFRRVLVKFGGKKLSQADQKTFQALPIAYAAVSTKQ 78
            SE+ +A  A  AR LA EA    R   +QS+LG+PLS DLL  FR VL+K GGK +S   QKTFQA PIAYAA++ KQ
Sbjct:   61 SEVMEADQAAAARALAQEAALRAREEAEQSKLGVPLSNDLLRAFRLVLLKTGGKVMSALAQKTFQAFPIAYAAITCKQ 138
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BLAST of mRNA_P-littoralis_Contig1096.11.1 vs. uniprot
Match: A0A6H5LQW7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQW7_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 7.050e-14
Identity = 43/75 (57.33%), Postives = 50/75 (66.67%), Query Frame = 0 
Query:    4 EMQQAAVVARTLAGEATAALRARPQQSQLGIPLSKDLLWGFRRVLVKFGGKKLSQADQKTFQALPIAYAAVSTKQ 78
            E  QAA  AR LA  A    R   +QS+LG+PLS DLL  FR VL+K GGK +S   QKTFQA PIAYAA++ KQ
Sbjct:    2 EADQAAA-ARALAQAAALRARDEAEQSKLGVPLSNDLLREFRLVLLKTGGKVMSALAQKTFQAFPIAYAAITCKQ 75
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1096.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KAW6_9PHAE4.960e-1456.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LQW7_9PHAE7.050e-1457.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1096contigP-littoralis_Contig1096:61499..61732 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1096.11.1mRNA_P-littoralis_Contig1096.11.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1096 61485..61732 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1096.11.1 ID=prot_P-littoralis_Contig1096.11.1|Name=mRNA_P-littoralis_Contig1096.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=78bp
MASEMQQAAVVARTLAGEATAALRARPQQSQLGIPLSKDLLWGFRRVLVK
FGGKKLSQADQKTFQALPIAYAAVSTKQ
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