prot_P-littoralis_Contig1096.13.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1096.13.1
Unique Nameprot_P-littoralis_Contig1096.13.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length52
Homology
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BLAST of mRNA_P-littoralis_Contig1096.13.1 vs. uniprot
Match: A0A6H5KAW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW6_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 1.700e-6
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0 
Query:    2 KEAAHDLDLPLPLDLDEKINYTTLGTG------------ACWTKFGTLKTEHTKGTQAQFD 50
            K AA  L+LPLPLD+++K+  T+LGTG            ACWTK+ T+K ++TK  Q  +D
Sbjct:  168 KAAAKKLELPLPLDIEDKMYLTSLGTGKKPAVSFKDKPRACWTKWETIKRDYTKEIQIIYD 228
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1096.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KAW6_9PHAE1.700e-644.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1096contigP-littoralis_Contig1096:61817..62304 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1096.13.1mRNA_P-littoralis_Contig1096.13.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1096 61817..62304 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1096.13.1 ID=prot_P-littoralis_Contig1096.13.1|Name=mRNA_P-littoralis_Contig1096.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=52bp
VKEAAHDLDLPLPLDLDEKINYTTLGTGACWTKFGTLKTEHTKGTQAQFD
M*
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