mRNA_P-littoralis_Contig1.314.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1.314.1 vs. uniprot
Match: A0A6H5KKK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK4_9PHAE) HSP 1 Score: 117 bits (293), Expect = 1.220e-29 Identity = 69/145 (47.59%), Postives = 93/145 (64.14%), Query Frame = 1
Query: 1 VMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVEKTG 435
VM KLL P GGMP+ +PE+ + +FN+WY RF KR+ FSIRR+TSVGQK P+G EG AWA + KLR +L + A E + R A D ++ V T+E+L +V+ ++F L NMDQT +Q EMP +TT+EKTG
Sbjct: 97 VMDKLLEMKPDALGGMPANAKPEEALALKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGHEGMAWATVMKLRETLSKRAGE--IYARRHPPAPDESPIK---GVDLTSEQLASVEAEVFEELGNMDQTQVQHEMPVETTLEKTG 236
BLAST of mRNA_P-littoralis_Contig1.314.1 vs. uniprot
Match: A0A6H5KJN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN9_9PHAE) HSP 1 Score: 120 bits (301), Expect = 2.770e-29 Identity = 72/145 (49.66%), Postives = 96/145 (66.21%), Query Frame = 1
Query: 1 VMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVEKTG 435
VM KLL P GGMP+ +PE+ F+ FN WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L + A E + R A D ++ E D+ T+E+L +V+ ++F L NMDQTP+Q EMP +TT+EKTG
Sbjct: 123 VMNKLLELKPDALGGMPANAKPEEALAFKVNFNPWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE-DL--TSEQLASVKAEVFEELGNMDQTPVQHEMPVETTLEKTG 262
BLAST of mRNA_P-littoralis_Contig1.314.1 vs. uniprot
Match: A0A6H5JCV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV1_9PHAE) HSP 1 Score: 119 bits (298), Expect = 9.710e-29 Identity = 68/145 (46.90%), Postives = 95/145 (65.52%), Query Frame = 1
Query: 1 VMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVEKTG 435
VM K+L P GGMP+ +PE+ F+ +FN+WY RF KRH SIRR+TSVGQK P+G+EG AWA + KLR +L + A E + R A + T ++ T+E+L +V+ ++F L NMDQTP+Q EMP +TT++KTG
Sbjct: 222 VMNKVLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRHGSSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGE-IYARRHPPAPDESPTKGEDL----TSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLDKTG 361
BLAST of mRNA_P-littoralis_Contig1.314.1 vs. uniprot
Match: A0A6H5JAU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU0_9PHAE) HSP 1 Score: 119 bits (297), Expect = 1.200e-28 Identity = 68/145 (46.90%), Postives = 95/145 (65.52%), Query Frame = 1
Query: 1 VMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVEKTG 435
VM KLL P GGMP+ +PE+ F+ +FN+WY RF KRH SIR++TSVGQK P+G+EG AWA + KLR +L + A E + R A + T ++ T+E+L +V+ ++F L NMDQTP+Q EMP +TT++KTG
Sbjct: 168 VMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRHGSSIRQRTSVGQKLPKGYEGMAWATVMKLREALVKRAGE-IYARRHPPAPDESPTKGEDL----TSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLDKTG 307
BLAST of mRNA_P-littoralis_Contig1.314.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE) HSP 1 Score: 119 bits (298), Expect = 1.730e-28 Identity = 71/145 (48.97%), Postives = 97/145 (66.90%), Query Frame = 1
Query: 1 VMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVEKTG 435
VM KLL P GGM + +PE+ F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L + A E + R A D ++ E D+ T+E+L +V+ ++F L NMDQTP+Q EMP +TT+EKTG
Sbjct: 182 VMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE-DL--TSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTG 321
BLAST of mRNA_P-littoralis_Contig1.314.1 vs. uniprot
Match: A0A6H5KRF0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF0_9PHAE) HSP 1 Score: 118 bits (296), Expect = 3.440e-28 Identity = 70/145 (48.28%), Postives = 97/145 (66.90%), Query Frame = 1
Query: 1 VMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVEKTG 435
VM KLL P GGMP+ +PE+ F+ +FN+WY RF KR+ FSIRR+TSV QK P+G+EG AWA + KLR +L + A E + R A + ++ E D+ T+E+L +V+ ++F L NMDQTP+Q EMP +TT+EKTG
Sbjct: 211 VMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVAQKLPKGYEGMAWATVMKLREALVKRAGE--IYARRHPPAPEESPIKGE-DL--TSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTG 350
BLAST of mRNA_P-littoralis_Contig1.314.1 vs. uniprot
Match: A0A6H5KFQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ9_9PHAE) HSP 1 Score: 115 bits (287), Expect = 4.300e-28 Identity = 68/145 (46.90%), Postives = 95/145 (65.52%), Query Frame = 1
Query: 1 VMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVEKTG 435
V+ KLL P GGMP+ +PE+ F+ +FN+WY +F KR+ FSIRR+TSVGQK P+G+EG AWA + LR +L + A + R A D ++ E D+ T E+L +V+ ++F L NMDQTP+Q EMP +TT+EKTG
Sbjct: 186 VINKLLQLKPDALGGMPANAKPEEALAFKIKFNSWYQQFRKRNGFSIRRRTSVGQKLPKGYEGTAWATVMNLREALVQRA--GAIHARRNPPAPDESPIKGE-DL--TCEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTG 325
BLAST of mRNA_P-littoralis_Contig1.314.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 117 bits (292), Expect = 4.420e-28 Identity = 70/144 (48.61%), Postives = 96/144 (66.67%), Query Frame = 1
Query: 4 MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVEKTG 435
M KLL P GGMP+ +PE+ F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G EG AWA + KLR +L + A E + R A D ++ E D+ T+E+L +V+ ++F L NMDQTP+Q E+P +TT+EKTG
Sbjct: 1 MNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE-DL--TSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTG 139
BLAST of mRNA_P-littoralis_Contig1.314.1 vs. uniprot
Match: A0A6H5L6D5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D5_9PHAE) HSP 1 Score: 110 bits (274), Expect = 5.830e-28 Identity = 68/144 (47.22%), Postives = 93/144 (64.58%), Query Frame = 1
Query: 4 MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVEKTG 435
M KLL P GGMP+ +PE+ F+ +FN+WY F KR+ FSIRR+TSVGQK P+G+EG A A + KLR +L + A E + R A D ++ E D+ T+E+L +V+ K+F L NMDQTP+Q EMP + T+EK G
Sbjct: 1 MNKLLQLKPDTLGGMPANAKPEEALAFKVKFNSWYQWFRKRNGFSIRRRTSVGQKLPKGYEGVAGATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE-DL--TSEQLASVEAKVFEELGNMDQTPVQHEMPVENTLEKAG 139
BLAST of mRNA_P-littoralis_Contig1.314.1 vs. uniprot
Match: A0A6H5KMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMV6_9PHAE) HSP 1 Score: 109 bits (272), Expect = 8.120e-28 Identity = 67/144 (46.53%), Postives = 90/144 (62.50%), Query Frame = 1
Query: 4 MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVLLERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVEKTG 435
M KLL P GGMP+ +PE F+ FN+WY RF R+ FSIRR+TSV +K P+G+EG AWA + KLR +L E A E + R A D ++ E D+ T+E+L +V+ +F L NMDQ P+Q EMP +TT+EK G
Sbjct: 1 MNKLLELKPDVLGGMPANAKPEDALAFKIEFNSWYQRFRMRNGFSIRRRTSVDKKLPKGYEGMAWATVMKLREALVERAGE--IYARRHPPAPDESPIKGE-DL--TSEQLASVEADVFEELGNMDQLPVQDEMPVETTLEKAG 139 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.314.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1.314.1 >prot_P-littoralis_Contig1.314.1 ID=prot_P-littoralis_Contig1.314.1|Name=mRNA_P-littoralis_Contig1.314.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=144bp MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTback to top mRNA from alignment at P-littoralis_Contig1:1445335..1445769- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1.314.1 ID=mRNA_P-littoralis_Contig1.314.1|Name=mRNA_P-littoralis_Contig1.314.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=435bp|location=Sequence derived from alignment at P-littoralis_Contig1:1445335..1445769- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1:1445335..1445769- >mRNA_P-littoralis_Contig1.314.1 ID=mRNA_P-littoralis_Contig1.314.1|Name=mRNA_P-littoralis_Contig1.314.1|organism=Pylaiella littoralis U1_48|type=CDS|length=432bp|location=Sequence derived from alignment at P-littoralis_Contig1:1445335..1445769- (Pylaiella littoralis U1_48)back to top |