mRNA_P-littoralis_Contig109.59.5 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig109.59.5
Unique NamemRNA_P-littoralis_Contig109.59.5
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig109.59.5 vs. uniprot
Match: D8LEN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN7_ECTSI)

HSP 1 Score: 621 bits (1602), Expect = 2.300e-208
Identity = 592/902 (65.63%), Postives = 641/902 (71.06%), Query Frame = 1
Query:   16 EFVQSEIDREAAAIADDRERARKAEDRSAGVDDRLKKLREQVSTLQEGVSQQAARDIERERRGRESATRAKEKLLDDNARLRAEMTKAEERAASLEDRLTETRRDLDAAREKEERLRSRVKTLGSSTNRGGAERATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LNELEKRVQVLTAQNAALRTIVPPXXXXXXXXXXXAAITKGQGRRLGSDXXXXXXXXXXIAPVSGRDLATSGXXXXXXXXXXXXTGHREAA-HRAWEAEKKLRRRVEALERRLEERGVELQAAEGQAARAKDLLTRREEAGTTKEKDAALRRLKDAGQGHDGGGRAGAGSS----PEVAEELRARLFLLEEENASLKRAAELELPREIDSLKHQVRAXXXXXXXXXXXXXXXXXXAKVAVSRALDGGDSDVGGGGGILRAEEGLFHDLQAARDELSALKAVRRELEGQVLERDSVNMELRFDLEARSAETERLRRRAKELQAALRSQGVXXXXXXXXXXVAKDAAASRPAGGRFKRERDLEGVVDALKRVTDKLRGENDRLRRVAGEGGGRAEAERSARAAKKKAAIICFASFFHVQAALQEEVERLTARAKDADAAVQKLAQKQDLVNQLRRKLKARDEDLRTFQERAEDLAETKTLLSAELEAANQRLVASDREYRSSGRSR--AADAAAHSAREAEDAKRAAATLRQQ---------------------------------------------------------------RMERR--SAMSGGRGGDVVAADGSLRASSTGLASSGGVAAGER---ELRLEQENRRLREE--------------LQAFDLDFFEEIEDLKYKYSEAARKLRQYE 2448
            EFVQSE+DREAAAIA+DRERARKAEDRSAGVD                                 +ATRAK+KLL+DNA+LRAE+TKAEERAASLEDRLTETRRDLDAAREKEERLRSR+KTL S++         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  LNELEKRVQVLTAQNAALRTIVP XXXXXXXXXXX              XXXXXXXXXX             XXXXXXXXXXXX  HREAA  RA EAEKKLRRRV ALE+RLEERGVELQAAEGQ A+AKDLL R       +EK+AALR+LKDAGQGHDGGGR G+ SS    PEVA+ LR+RLF LEEENASLKR AE+ELPRE++SLKHQVR XXXXXXXXXXXXXX    AKV V+RAL    SD   GGGILRAEEGL+HDLQAA+DE+ ALKA+ R+LEGQVL+RDSVN+ELRFDLEAR+AETERLRRRA+ELQAAL++ G            AKD   SRPAGGRFKRERDLEGVVDALKRVTDKLRGENDRLRR+AGEGGG+AEAERSAR AKKKAA            AL+EEV++LTARAKDAD+AVQKLAQKQ+LVNQLRR LK RD  ++TFQERAEDLAETKTLLSAELEAANQRLVASDR+ RSSGRSR  AA AAAH+ARE EDAKR AATLRQQ                                                               RMERR  SAMS    G   AAD   R S   L  SG    G R   E RL Q+  RL++E              L AFD +FFEEIEDLKYKYSEA RKLRQ+E
Sbjct:    3 EFVQSEMDREAAAIANDRERARKAEDRSAGVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AATRAKDKLLEDNAQLRAEVTKAEERAASLEDRLTETRRDLDAAREKEERLRSRIKTLDSNSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNELEKRVQVLTAQNAALRTIVPXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHREAAVSRAMEAEKKLRRRVGALEKRLEERGVELQAAEGQTAKAKDLLVR-----ANREKEAALRKLKDAGQGHDGGGRTGSSSSSSLSPEVADGLRSRLFQLEEENASLKRTAEMELPREVESLKHQVRXXXXXXXXXXXXXXXAERRAKVVVARALS---SDSNSGGGILRAEEGLYHDLQAAKDEVVALKAIGRDLEGQVLQRDSVNVELRFDLEARTAETERLRRRARELQAALKTGGGTAG--------AKDG--SRPAGGRFKRERDLEGVVDALKRVTDKLRGENDRLRRMAGEGGGKAEAERSAREAKKKAA------------ALREEVDKLTARAKDADSAVQKLAQKQELVNQLRRTLKVRDATIKTFQERAEDLAETKTLLSAELEAANQRLVASDRDSRSSGRSRPPAAAAAAHTARELEDAKREAATLRQQVQHQSEVVDRLRGDMNRDREETAAAAAGPGSEAVEAARAPAESAQDEADELRDRLAETERELQRMERRCASAMSTASRGGEGAADSFDRGSKDLLRVSGTGGLGSRGDGEGRLTQD--RLKKENXXXXXXXXXXXXXLGAFDHEFFEEIEDLKYKYSEAVRKLRQFE 866          
BLAST of mRNA_P-littoralis_Contig109.59.5 vs. uniprot
Match: A0A6H5KTB3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTB3_9PHAE)

HSP 1 Score: 645 bits (1665), Expect = 8.320e-203
Identity = 588/905 (64.97%), Postives = 633/905 (69.94%), Query Frame = 1
Query:   13 QEFVQSEIDREAAAIADDRERARKAEDRSAGVDDRLKKLREQVSTLQEGVSQQAARDIERERRGRESATRAKEKLLDDNARLRAEMTKAEERAASLEDRLTETRRDLDAAREKEERLRSRVKTLGSSTNRGGAERATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNELEKRVQVLTAQNAALRTIVPPXXXXXXXXXXXAAIT--KGQGRRLGSDXXXXXXXXXXIAPVSGRDLATSGXXXXXXXXXXXXTGHREAA-HRAWEAEKKLRRRVEALERRLEERGVELQAAEGQAARAKDLLTRREEAGTTKEKDAALRRLKDAGQGHDGGGRAGA--GSSPEVAEELRARLFLLEEENASLKRAAELELPREIDSLKHQVRAXXXXXXXXXXXXXXXXXXAKVAVSRALDGGDSDVGGGGGILRAEEGLFHDLQAARDELSALKAVRRELEGQVLERDSVNMELRFDLEARSAETERLRRRAKELQAALRSQGVXXXXXXXXXXVAKDAAASRPAGGRFKRERDLEGVVDALKRVTDKLRGENDRLRRVAGEGGGRAEAERSARAAKKKAAIICFASFFHVQAALQEEVERLTARAKDADAAVQKLAQKQDLVNQLRRKLKARDEDLRTFQERAEDLAETKTLLSAELEAANQRLVASDREYRSSGRSRAADAA---AHSAREAEDAKRAAATLRQQ--------------------------------------------------------------RMERR--SAMSGGRGGDVVAAD----GS---LRASSTGLASSGGVAAGERELRLEQENRRLREE--------------LQAFDLDFFEEIEDLKYKYSEAARKLRQYE 2448
            QEFVQSE+DREAAAIA+DRERA+KAEDRSA VDDRLK LREQVST   GVSQ AARDIERERRGR++ATRAK+KLL+DNA+LRAE+TKAEERAASLEDRLTETRRDLDAAREKEERLRSR+KTL S  N GG          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNELEKRVQVLTAQN ALRTIVPP              T  KGQGRRLGS       XXXX                    XXXXX  HREAA  RA EAEKKLRRRV  LE+RLEERGVELQAAEGQ A+AK LL RR               +   G  H GG R GA   SSPEV ++LR+RLF LEEENASLKR AE+ELPRE++SLKHQV  XXXXXXXXXXXXXXXXX AKV V+RAL   D + GG GGILRAEEGL+HDLQAA+DE+ ALKA+ R+LEGQVLERDS N+ELRFDLEAR+AETERLRRR +ELQAAL++ G XXXX       AKD   SRPAGGRFKRERDLEGVVDALKRVTDKLRGENDRLRR+AGEGGG+AEA+RSAR AKKKAA             L+EEV+RLTARAKDAD+AVQKLAQKQDLVNQLRR LK RD  ++TFQ+RAEDLAE KTLLSAELEAANQRLVASDR+ RSS RSR        AH+ARE EDAKR AATLRQQ                                                              RMERR  SAMS    G   AAD    GS   LR S TG   S G   G    RL Q+  RLREE              L AFD +FFEEIEDLKYKYSEA RKLR +E
Sbjct: 1729 QEFVQSEMDREAAAIANDRERAKKAEDRSAAVDDRLKGLREQVSTXXXGVSQ-AARDIERERRGRQAATRAKDKLLEDNAQLRAEVTKAEERAASLEDRLTETRRDLDAAREKEERLRSRIKTLDS--NSGGKX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNELEKRVQVLTAQNEALRTIVPPPHTPASATEKKEPTTLAKGQGRRLGSAASPDDRXXXXXXXXXXXXXXXX--------XXXXXXXHREAAVSRAMEAEKKLRRRVGVLEKRLEERGVELQAAEGQTAKAKGLLARRG--------------VVVVGGWHKGG-RTGAESSSSPEVTDDLRSRLFQLEEENASLKRVAEMELPREVESLKHQVXXXXXXXXXXXXXXXXXXXRAKVVVARALSS-DGNSGGDGGILRAEEGLYHDLQAAKDEVVALKAIGRDLEGQVLERDSANVELRFDLEARTAETERLRRRTRELQAALKTGGXXXXXG------AKDG--SRPAGGRFKRERDLEGVVDALKRVTDKLRGENDRLRRMAGEGGGKAEAQRSAREAKKKAAE------------LREEVDRLTARAKDADSAVQKLAQKQDLVNQLRRTLKVRDATIKTFQDRAEDLAEAKTLLSAELEAANQRLVASDRDSRSSCRSRPXXXXXXXAHTARELEDAKREAATLRQQVQHQSEVVDRLRGDMNRDREETAAAVGPGSEALEAARAAXXXXXXXXXXXXDRLAETERELQRMERRCASAMSTASRGGEGAADSFDGGSKDLLRVSGTGGLGSRGDGEG----RLTQD--RLREENXXXXXXXXXXXXELGAFDHEFFEEIEDLKYKYSEAVRKLRHFE 2572          
BLAST of mRNA_P-littoralis_Contig109.59.5 vs. uniprot
Match: A0A7S1UJF9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJF9_9STRA)

HSP 1 Score: 149 bits (377), Expect = 2.780e-35
Identity = 162/406 (39.90%), Postives = 215/406 (52.96%), Query Frame = 1
Query:  922 LRRRVEALERRLEERGVELQAAEGQAARAKDLLTRREEAGTTKEKDAALRRLKDAGQGHDGGGRAGAGSSPEVAEEL---RARLFLLEEENASLKRAAELELPREIDSLKHQVRAXXXXXXXXXXXXXXXXXXAKVAVSRALDGGDSDVGGGGGI-----LRAEEGLFHDLQAARDELSALKAVRRELEGQVLERDSVNMELRFDLEARSAETERLRRRAKELQAALRSQGVXXXXXXXXXXVAKDAAASRPAGGRFKRERDLEGVVDALKRVTDKLRGENDRLRRVAGEGGGRAEAERSARAAKKKAAIICFASFFHVQAALQEEVERLTARAKDADAAVQKLAQKQDLVNQLRRKLKARDEDLRTFQERAEDLAETKTLLSAELEAANQRLVASDREYRSSGRS 2115
            L+RR + L  RLE +  +L+AAE          TR + A   KE+D   RRL + G+       +GA +S   AE+L    A++F LE E   L+R   +    E   L+    AXXXXXXXXXXXX          + R LD    D+ GGGG      +R  E  F  L  AR+ L AL    RE EG++LE+D+ NMEL F++ A +  +ER  RR  EL+  +   G     XXXXXX  K     R AGGRF RERDLEGVVDALKRV DKL+ EN+RLRR A E    +EAER AR A+ + A             LQ E+  L  RA   + A Q+LA K +   QLRR +K RD +L+  +++ ++L  T+  L      AN+R++  +R    S RS
Sbjct:   38 LKRRQKTLTERLEGQQADLEAAESALT-----ATRSQMASLKKERDTLQRRLNNTGE-------SGASASRAAAEDLAAAHAKVFKLEGELEELRREKAVTFEAETLRLRGAAAAXXXXXXXXXXXXRR--------LQRQLD----DLTGGGGEGAVTDMRRSEARFTQLSQAREGLEALNKRLREAEGKLLEKDAKNMELTFEVSAANTRSERFARRVAELEGVINRGGAGKGGXXXXXXXGK----GRKAGGRFNRERDLEGVVDALKRVVDKLKSENERLRRGAAESTKVSEAERRARDARGRVAE------------LQAELTALRTRAAAGEEASQRLASKTEQSAQLRRAIKRRDGELKDLRDKVDELERTRQNLEEAANNANKRVLQLERRADGSRRS 403          
BLAST of mRNA_P-littoralis_Contig109.59.5 vs. uniprot
Match: A0A7S2SBL1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SBL1_9STRA)

HSP 1 Score: 131 bits (330), Expect = 6.670e-28
Identity = 135/388 (34.79%), Postives = 187/388 (48.20%), Query Frame = 1
Query: 1363 GGGGILRAEEGLFHDLQAARDELSALKAVRRELEGQVLERDSVNMELRFDLEARSAETERLRRRAKELQAALRSQGVXXXXXXXXXXVAKDAAASRPAGGRFKRERDLEGVVDALKRVTDKLRGENDRLRRVAGEGGGRAEAERSARAAKKKAAIICFASFFHVQAALQEEVERLTARAKDADAAVQKLAQKQDLVNQLRRKLKARDEDLRTFQERAEDLAETKTLLSAEL------------EAANQRLVASDREYRSSGRSRAADAAAHSAREAEDAKRAAATLRQQRMERRSAMSGGRGGDVVAADGSL--------------RASSTGLASSGGVAAGERELRLEQENRRLREELQAFDLDFFEEIEDLKYKYSEAARKLRQYE 2448
            G G  LR  E  F  L++ RDE  AL   ++ L+ Q+L  +S  +EL+FDL  R  E ERLRRR KEL+A+  +                 A ASR  G RFKRERDLE VV+ L++V ++L+ EN+RL+    +    + AER AR AK +A              L+EE+  L  RA  A+ ++ KLAQ+ + V+QL+R ++ +DE+++                                +  + R  A     R  G+ RA+ A A       +  R    LR+Q      A +G   G V      L              RAS    +S      GE   RL  EN +L++EL AFDLDFFEEIEDLKYKY+EA +KLRQ+E
Sbjct:  367 GRGRSLRESEDNFLKLESLRDEADALVREKKTLQLQILRYESSTLELQFDLNLRDQEVERLRRRVKELEASYDAVSTGGGGG---------AKASRAPGERFKRERDLESVVEGLQKVVNQLKRENERLKSGGADQTKLSAAERRARDAKSEAT------------GLREELVSLRGRAATAEDSMSKLAQRNEQVSQLKRTIRQKDEEIQAHTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVDSIRAGAGSGPGRGDGKDRASLAQAQ-----HEIDRLKQQLRRQGQATGGADTGPLQGRVNELSADLEDARREIQRLEDRARASERRTSSLSDADVGEL-TRLRDENAKLKQELSAFDLDFFEEIEDLKYKYAEAVKKLRQFE 727          
BLAST of mRNA_P-littoralis_Contig109.59.5 vs. uniprot
Match: A0A7S2SL49_9STRA (Hypothetical protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SL49_9STRA)

HSP 1 Score: 126 bits (317), Expect = 6.910e-26
Identity = 157/516 (30.43%), Postives = 237/516 (45.93%), Query Frame = 1
Query:  904 WEAEKKLRRRVEALERRLEERGVELQAAEGQAARAKDLL---TRREEAGTTKEKDAALRRLKDAGQGHDGGGRAGAGSSPEVAEELRARLFLLEEENASLKRAAELELPREIDSLKHQVRAXXXXXXXXXXXXXXXXXXAKVAVSRALDGGDSDVGGGGGILRAEEGLFHDLQAARDELSALKAVRRELEGQVLERDSVNMELRFDLEARSAETERLRRRAKELQAALRSQGVXXXXXXXXXXVAKDAAASRPAGGRFKRERDLEGVVDALKRVTDKLRGENDRLRRVAGEGGGRAEAERSARAAKKKAAIICFASFFHVQAALQEEVERLTARAKDADAAVQKLAQKQDLVNQLRRKLKARDEDLRTFQERAEDLAETKTLLSAELEAANQRLVASDREYRSSGRSRAADAAAHSAREAEDAKRAAATLRQQRMERRSAMSGGRGGDVVAADGSLRASSTGLASSGGVAAGERELRLEQENRRLREELQAFDLDFFEEIEDLKYKYSEAARKLRQ 2442
            WEAEKK  +R+  L ++L+ER  ELQA+  QA +AK LL   TR  +   T+     L RL  +          G        +EL   L L   +N  L+R  E+E   EI++L+ +V A                   K        GGDS        L+  E  +      R +L+  +   R LE ++LERD+  +ELRF+LE    ETER R+ ++ +                     K +   R AG  FKRERDLE VV+++K+V  KL+ EN+RL+R        +E  +  +  +++            +  L+   E L+ R +    A  K+ + +D V  L++++++RD  L   + + ++L      L+ E+E ANQRL       R +  S              D +R   +LR +  ++++ +             SLRAS     SS      E + RLE+EN+RL  EL AFDLDFFEEIEDLKYKY +A ++ RQ
Sbjct: 1931 WEAEKKTEKRLSVLSKKLDERTKELQASRAQADQAKQLLEKATRDRQVLQTR-----LNRLSSSSTPQKMSSPQGGTHLRRQMDELEQELELKTRQNRDLRRQVEVEQRGEINTLRREVSATRARAIELEEELDIIKSRKK------RSGGDS--------LQIAEEHYAREDEIRHQLAESRKAERALEAELLERDNTILELRFELEQ---ETERQRKPSRPVLGE-----------------GKISEPRRGAGELFKRERDLENVVESMKKVVSKLQSENERLKRSTSGNARYSELGKRVKELERE------------RDQLETSNEALSRRVQQNSEASTKVIRLEDAVKSLKKQIRSRDTALEKEKSKLDNLRAENARLTGEIEEANQRLT------RGTSPS--------------DTER---SLRSKIQDQKNIID------------SLRASP----SSSRDLITENQ-RLERENQRLLNELNAFDLDFFEEIEDLKYKYQQAVQENRQ 2355          
BLAST of mRNA_P-littoralis_Contig109.59.5 vs. uniprot
Match: A0A7S3XY01_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY01_HETAK)

HSP 1 Score: 108 bits (271), Expect = 1.270e-22
Identity = 104/285 (36.49%), Postives = 147/285 (51.58%), Query Frame = 1
Query: 1648 RPAGGRFKRERDLEGVVDALKRVTDKLRGENDRLRRVAGEGGGRAEAERSARAAKKKAAIICFASFFHVQAALQEEVERLTARAKDADAAVQKLAQKQDLVNQLRRKLKARDEDLRTFQERAEDLAETKTLLSAELEAANQRLVASDREYRSSGRSRAADAAA------------HSAREAEDAKRAAATLRQQRMERRSAMSGGRGGDVVAADGSLRASSTGLASSGGVAAG------ERELRLEQENRRLREELQAFDLDFFEEIEDLKYKYSEAARKLRQYE 2448
            R AG RF+RERDLEGVVD+L+RV +KL+ EN+RLRR AG+           RA    A                             DA+ Q+LAQ++D V  LR+++++RD+++ + Q++     ++K LLS ELE AN RL +++ E     + ++  A+A               RE E+ K   A+LR +      A + G GG   AA+ +        A  G           E   RL +EN +L  ELQAFDLDFFEEIEDLK+KY+EA RKL+ Y+
Sbjct:    5 RAAGDRFQRERDLEGVVDSLRRVIEKLKAENERLRRGAGD-----------RAKVADADXXXXXXXXXXXXXXXXXXXXXXXXXXGGDAS-QRLAQQRDAVAHLRKQMRSRDKEIESLQKQITQQDQSKGLLSGELERANIRLQSANEEIARLRKGQSEQASASRMLSDNQATLIQKNREIEELKGVVASLRTK------AQATGEGGQRWAAEKARLLDELAEARRGXXXXXXXXLREEENARLREENAKLARELQAFDLDFFEEIEDLKFKYAEAQRKLQAYQ 271          
BLAST of mRNA_P-littoralis_Contig109.59.5 vs. uniprot
Match: A0A2R5G9X9_9STRA (Centrosomal protein of 290 kDa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G9X9_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.530e-22
Identity = 172/602 (28.57%), Postives = 246/602 (40.86%), Query Frame = 1
Query:  631 LEKRVQVLTAQNAALRTIVPPXXXXXXXXXXXAAITKGQGRRLGSDXXXXXXXXXXIAPVSGRDLATSGXXXXXXXXXXXXTGHREAAHRAWEAEKKLRRRVEALERRLEERGVELQAAEGQAARAKDLLTRREE----AGTTKEKDAALRRLKDAGQGHDGGGRAGAGSSPEVAEELRARLFLLEEENASLKRAAELELPREIDSLKHQVRAXXXXXXXXXXXXXXXXXXAKVAVSRALDGGDSDVGGGGGILRAEEGLFHDLQAARDELSALKAVRRELEGQVLERDSVNMELRFDLEARSAETERLRRRAKELQAALRSQGVXXXXXXXXXXVAKDAAASRPAGGRFKRERDLEGVVDALKRVTDKLRGENDRLRRVAGEGGGRAEAERSARAAKKKAAIICFASFFHVQAALQEEVERLTARAKDADAAVQKLAQKQDLVNQLRRKLKARDEDLRTFQERAEDLAETKTLLSAELEAANQRLVASDREYRSSGRSRAADAAAHSAREAEDAKRAAATLRQQRMERRSAMSGGRGGDVVAADGSLRASSTGLASSGGVAAGERELRLEQENRRLREELQAFDLDFFEEIEDLKYKYSEA 2424
            LEKR++VL AQNAALR+                A +K                    A  SG+D                      AA   WEA K+L ++V  L+RRLEER  EL+A+  Q  +AK L+ +       A        A        Q H+G     A       E+ R  L   ++    L+R  E+E P ++     QV A                   ++       G DS        L+  E  +      R +L+ ++   + LE  +L+RD+  +ELRF++E  S+E ER RR   + ++ L S G            +   A SR  G RFKRERDLE VV+++K+V  KL+ EN+RL+R         + ++  RA K++              AL    + L  RA     +  K  + QD V  LRR+ +A + D+   + RA  L      L  EL+ A+ RL A      + GR +  D      RE          +   R+E  +A   G G   V  D                 A E    L  EN+RL+ EL AFD+DFFEEIEDLKY+Y +A
Sbjct: 1961 LEKRIKVLEAQNAALRSAAK------------TAASKSD-----------------AALSSGQDSG--------------------AASSTWEAGKRLEKKVSVLQRRLEERTRELEASREQTQQAKHLVDKMSRQVRSARGPPSGHTAWESNGSVSQAHEG-----ARKLRRELEDARRELEDRDDRMLELRRQVEVEFPSQLA----QVNADRRASMARARDLEEELESFRLRKRHRSSGADS--------LQIAEDQYGREDEIRQQLAQVRKEAQGLESDLLDRDNTILELRFEMEQLSSEVERCRR---DDESKLPSSGTSP---------SSRGATSRAPGERFKRERDLENVVESMKKVVSKLQAENERLKRTHTSSARYGDLQKQVRALKQE------------NQALVSARDTLQDRAVKYSESSAKAIRLQDAVRGLRRQTRALETDVEKERARATALWSENQKLVEELQQASDRLSARVPRLEA-GRDQEVDDLRRKVREQ------TRVIDALRLEVSAATDLGPGAGAVDED-----------------AREALEDLRAENQRLKNELNAFDMDFFEEIEDLKYRYQQA 2448          
BLAST of mRNA_P-littoralis_Contig109.59.5 vs. uniprot
Match: A0A835Z7Q7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Q7_9STRA)

HSP 1 Score: 103 bits (258), Expect = 2.600e-20
Identity = 81/184 (44.02%), Postives = 106/184 (57.61%), Query Frame = 1
Query: 1456 ELEGQVLERDSVNMELRFDLEARSAETERLRRRAKELQAALRSQGVXXXXXXXXXX--------VAKDAAASRPAGGRFKRERDLEGVVDALKRVTDKLRGENDRLRRVA------GEGGGRAEAERSARAAKKKAAIICFASFFHVQAALQEEVERLTARAKDADAAVQKLAQKQDLVNQLRR 1965
            ELE ++LERD+  +  RFDLEA ++E ERL+RR +E+Q ALR+                     VA    A+R  GGRF RERDLE VV+ALKRV +KLR ENDRL+R A      G+ GG ++AER  R   ++               L +EV  L ARA  AD + Q++AQ+QDL+ QLRR
Sbjct:   44 ELEDELLERDAAAIAARFDLEAAASEAERLQRRHREMQEALRAANARAGADPASPPRFPPHACGVAAADDATRLGGGRFNRERDLETVVEALKRVVEKLRAENDRLKRGAAAATAQGKAGG-SDAERRLRRQNEE---------------LAQEVAALKARAAAADQSSQQIAQRQDLIGQLRR 211          
BLAST of mRNA_P-littoralis_Contig109.59.5 vs. uniprot
Match: A0A7R9U7K0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7K0_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 9.650e-17
Identity = 78/218 (35.78%), Postives = 108/218 (49.54%), Query Frame = 1
Query: 1363 GGGGI--LRAEEGLFHDLQAARDELSALKAVRRELEGQVLERDSVNMELRFDLEARSAETERLRRRAKELQAALRSQGVXXXXXXXXXXVAKDAAASRPAGGRFKRERDLEGVVDALKRVTDKLRGENDRLRRVAGEGGGRAEAERSARAAKKKAAIICFASFFHVQAALQEEVERLTARAKDADAAVQKLAQKQDLVNQLRRKLKARDEDLRTFQER 2010
            GGG +  LR  E  F  L  AR+ + +L    ++ E ++LE ++ +MEL+F++ A +   ER  RR  EL+ A+R   V           A+ +  +R  GGRFKRERDLEGVVDALKRV            R A E     EAER                       LQ E+  L  RA   + A Q+LA K + + QLRR LK RD +L++ +E+
Sbjct:   55 GGGDVSELRKSESRFSQLAQARETIESLNKRLQDAESKILEGEAKSMELQFEVSAATTRNERFSRRISELEEAVRQSEVA---------TAEGSTLARKPGGRFKRERDLEGVVDALKRVXXXXXXXXXXXXRGAAESTKVNEAERR------------XXXXXXXXXELQAELTGLRTRAAAGEEASQRLASKTEQLAQLRRALKRRDGELKSLREK 251          
BLAST of mRNA_P-littoralis_Contig109.59.5 vs. uniprot
Match: A0A388KQS8_CHABU (Dzip-like_N domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KQS8_CHABU)

HSP 1 Score: 68.6 bits (166), Expect = 5.680e-8
Identity = 86/305 (28.20%), Postives = 131/305 (42.95%), Query Frame = 1
Query:  904 WEAEKKLRRRVEALERRLEERGVELQAAEGQAARAKDLLTRREEAGTTKEKDAALRRLKDAGQGHDGGGRAGAGSSPEVAEELRARLFLLEEENASLKRAAELELPREIDSLKHQVRAXXXXXXXXXXXXXXXXXXAKVAVSRALDGGDSDVGGGGGILRAEEGLFHDLQAARDELSALKAVRRELEGQVLERDSVNMELRFDLEARSAETERLRRRAK-----ELQAALRSQGVXXXXXXXXXXVAKDAAAS----------------RPAGGRFKRERDLEGVVDALKRVTDKLRGENDRLRR 1755
            WE EKKLR+RV+ +  RL E   E +    +A +A D +   E   T K K     R  +A     G  R    ++  + +E+ A++  +E EN  L+R A +E   EI+ LK +V A                  +  + SR +D   S+      +   EE      Q    E+   +  R+ELE ++L RD+ N+ELRF+ E    E  RLR R K     EL      +            V + A+ +                    GR  RE +LE VV++L +V +KLR EN+ L++
Sbjct: 2346 WEEEKKLRKRVDMMRSRLMESRREAEEHASRARQADDTVKLLE---TEKNKLRERIRALEAASRAAGAPRFTESTADRI-KEILAQMKEVEVENEKLRREAMVEKEAEINRLKREVEALRLSADGNAERDSKQRATSSPSASRGVDARRSEPL----VEVEEEERLMRWQELEKEVEDGRKARQELEDRILARDNANLELRFEKEQALLEGSRLRARLKCLFDEELWPLSAGKAGVEPGGGSSTRVTRSASGAIASAEGKGSTHGGGRVSSCSGRGSRELELEAVVESLTKVVEKLRTENEGLKK 2642          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig109.59.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LEN7_ECTSI2.300e-20865.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTB3_9PHAE8.320e-20364.97Reverse transcriptase domain-containing protein n=... [more]
A0A7S1UJF9_9STRA2.780e-3539.90Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2SBL1_9STRA6.670e-2834.79Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2SL49_9STRA6.910e-2630.43Hypothetical protein n=2 Tax=labyrinthulid quahog ... [more]
A0A7S3XY01_HETAK1.270e-2236.49Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2R5G9X9_9STRA1.530e-2228.57Centrosomal protein of 290 kDa n=1 Tax=Hondaea fer... [more]
A0A835Z7Q7_9STRA2.600e-2044.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9U7K0_9STRA9.650e-1735.78Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A388KQS8_CHABU5.680e-828.20Dzip-like_N domain-containing protein n=1 Tax=Char... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig109contigP-littoralis_Contig109:280338..290546 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog4787.PITG_09505T0
Model size2451
Max annot lvl4776|Peronosporales
KEGG koko:K16533
Hectar predicted targeting categoryother localisation
Exons14
Evalue8.99e-05
EggNOG OGs29FR3@1|root,2RNWW@2759|Eukaryota,3QDSP@4776|Peronosporales
Cds size2451
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789417.9620461-CDS-P-littoralis_Contig109:280337..2805951680789417.9620461-CDS-P-littoralis_Contig109:280337..280595Pylaiella littoralis U1_48CDSP-littoralis_Contig109 280338..280595 -
1680789417.9763901-CDS-P-littoralis_Contig109:280808..2809511680789417.9763901-CDS-P-littoralis_Contig109:280808..280951Pylaiella littoralis U1_48CDSP-littoralis_Contig109 280809..280951 -
1680789417.9940321-CDS-P-littoralis_Contig109:281584..2816931680789417.9940321-CDS-P-littoralis_Contig109:281584..281693Pylaiella littoralis U1_48CDSP-littoralis_Contig109 281585..281693 -
1680789418.0034668-CDS-P-littoralis_Contig109:282067..2821831680789418.0034668-CDS-P-littoralis_Contig109:282067..282183Pylaiella littoralis U1_48CDSP-littoralis_Contig109 282068..282183 -
1680789418.0130694-CDS-P-littoralis_Contig109:282721..2828671680789418.0130694-CDS-P-littoralis_Contig109:282721..282867Pylaiella littoralis U1_48CDSP-littoralis_Contig109 282722..282867 -
1680789418.0259304-CDS-P-littoralis_Contig109:283387..2835961680789418.0259304-CDS-P-littoralis_Contig109:283387..283596Pylaiella littoralis U1_48CDSP-littoralis_Contig109 283388..283596 -
1680789418.03617-CDS-P-littoralis_Contig109:284231..2844531680789418.03617-CDS-P-littoralis_Contig109:284231..284453Pylaiella littoralis U1_48CDSP-littoralis_Contig109 284232..284453 -
1680789418.0468085-CDS-P-littoralis_Contig109:285480..2856241680789418.0468085-CDS-P-littoralis_Contig109:285480..285624Pylaiella littoralis U1_48CDSP-littoralis_Contig109 285481..285624 -
1680789418.059137-CDS-P-littoralis_Contig109:286266..2863301680789418.059137-CDS-P-littoralis_Contig109:286266..286330Pylaiella littoralis U1_48CDSP-littoralis_Contig109 286267..286330 -
1680789418.0702138-CDS-P-littoralis_Contig109:286771..2870451680789418.0702138-CDS-P-littoralis_Contig109:286771..287045Pylaiella littoralis U1_48CDSP-littoralis_Contig109 286772..287045 -
1680789418.0786216-CDS-P-littoralis_Contig109:287540..2876581680789418.0786216-CDS-P-littoralis_Contig109:287540..287658Pylaiella littoralis U1_48CDSP-littoralis_Contig109 287541..287658 -
1680789418.089819-CDS-P-littoralis_Contig109:288455..2887771680789418.089819-CDS-P-littoralis_Contig109:288455..288777Pylaiella littoralis U1_48CDSP-littoralis_Contig109 288456..288777 -
1680789418.1004314-CDS-P-littoralis_Contig109:289790..2899481680789418.1004314-CDS-P-littoralis_Contig109:289790..289948Pylaiella littoralis U1_48CDSP-littoralis_Contig109 289791..289948 -
1680789418.1107204-CDS-P-littoralis_Contig109:290378..2905461680789418.1107204-CDS-P-littoralis_Contig109:290378..290546Pylaiella littoralis U1_48CDSP-littoralis_Contig109 290379..290546 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig109.59.5prot_P-littoralis_Contig109.59.5Pylaiella littoralis U1_48polypeptideP-littoralis_Contig109 280338..290546 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig109.59.5

>prot_P-littoralis_Contig109.59.5 ID=prot_P-littoralis_Contig109.59.5|Name=mRNA_P-littoralis_Contig109.59.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=817bp
MLYIQEFVQSEIDREAAAIADDRERARKAEDRSAGVDDRLKKLREQVSTL
QEGVSQQAARDIERERRGRESATRAKEKLLDDNARLRAEMTKAEERAASL
EDRLTETRRDLDAAREKEERLRSRVKTLGSSTNRGGAERATSGGGGKERS
NPKKKTRTSRSGGRVPEESKASSSSSSDGHGDDDSYSTPGAGSGGDSGGG
GGGKRRRLNELEKRVQVLTAQNAALRTIVPPPTPAPSDKKTTAAITKGQG
RRLGSDDASPDNNNTTIAPVSGRDLATSGNGGGGGNSGGGGTGHREAAHR
AWEAEKKLRRRVEALERRLEERGVELQAAEGQAARAKDLLTRREEAGTTK
EKDAALRRLKDAGQGHDGGGRAGAGSSPEVAEELRARLFLLEEENASLKR
AAELELPREIDSLKHQVRALRAQLEETDDQLEEAERRAKVAVSRALDGGD
SDVGGGGGILRAEEGLFHDLQAARDELSALKAVRRELEGQVLERDSVNME
LRFDLEARSAETERLRRRAKELQAALRSQGVGVGSGGGGGGVAKDAAASR
PAGGRFKRERDLEGVVDALKRVTDKLRGENDRLRRVAGEGGGRAEAERSA
RAAKKKAAIICFASFFHVQAALQEEVERLTARAKDADAAVQKLAQKQDLV
NQLRRKLKARDEDLRTFQERAEDLAETKTLLSAELEAANQRLVASDREYR
SSGRSRAADAAAHSAREAEDAKRAAATLRQQRMERRSAMSGGRGGDVVAA
DGSLRASSTGLASSGGVAAGERELRLEQENRRLREELQAFDLDFFEEIED
LKYKYSEAARKLRQYE*
back to top

mRNA from alignment at P-littoralis_Contig109:280338..290546-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig109.59.5 ID=mRNA_P-littoralis_Contig109.59.5|Name=mRNA_P-littoralis_Contig109.59.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=10209bp|location=Sequence derived from alignment at P-littoralis_Contig109:280338..290546- (Pylaiella littoralis U1_48)
ATGCTTTATATTCAGGAATTCGTGCAGTCGGAGATAGACAGGGAGGCCGC GGCCATCGCCGATGACAGGGAGCGAGCGAGGAAGGCGGAGGACCGATCTG CCGGTGTCGACGACAGGCTCAAGAAGCTCAGGGAACAGGTTTCCACTCTG CAAGAGGGCGTGTCTCAGGTGAGCGCGCGGCGACGAGATACGTAGAAAGG ATCATTTCTTATACTGCTGTGGTTGTGCGGCAAGTTGCAAGGATCGTTGC GTACACTGCTGTAGTTGTGTCGCAAAAGTTGCAACGTGTGTTGGTGACGT CACATGTTTTGCGTGCGTGGTTTTGGCGTCGGCGGTTGGTTGTCCGCCTC CCGAAGCATTCGCTCTTGCTCGTCTTGACTTGTTCCCGCCCGAGCTGTTG TTGCTGTCTGCATTCATTTGTTGAGTCCCTAGCTGTCTGGTCTCCCACCA CTGCCTCTAAACGAACCATCCTTCAGAGTAATGTAGTGCTCTAGCCGTTT TTTTTTTTTGGCCACGCGACAGCAAAAATTTCACACGCGCTTTTTTGACG CGTATACTTCGAAGTATCATGATATCTAACCGCCGCTTTCCTACCAAGCA GGCCGCCCGTGACATCGAGAGGGAGCGGCGGGGGCGGGAGAGCGCCACGA GGGCCAAGGAGAAGCTCCTCGATGACAACGCACGACTCCGCGCGGAGATG ACGAAGGCCGAGGAGAGAGCAGCCTCGCTGGAAGACCGCTTGACGGAGAC CAGGCGGTGAGGGCTGCTGGGAGCGGTCATGCGGCGACGAGACAGGAGTA ATTTTCAGTGCCTTTTCGTAAAATTGTGCGGTTTCAGTCTTAGCGGCCAG TCATGCGGTGACAGACGGTAGCTTTCGGGGCCCTCTCAAAAAATTGTGCG ATCTTCAGTTGTACTCTTACGTGGGGGACCGCTTGGTGGCGCGCTACAGT TAGCAGTGGAGCACGCTTGATTCGGACCTGGTGTGTGTGTGTGAGTGTGG GGAGGGTGGCGATGGGGATGGATGAAGCCAAGGCTGTTTAACGTGGCATT TTTGGGGGGGGGAACGAACGGCAACCCGCATGACATGCTGAGTTCAATAG AGCTGCTAATAGGGAAAAAAAAAATCAGCTCGCTTCACCGGCGTATCATA TGTACAGGCAGTCCACCTTTACCCGAAGGGCGCTTGACAGGGACCCCGCG GTCAGTGTTGTGAAACCGCCGTAGCACGGGTGTCTGTGTACCGTACGGAT TTGGCGTGTCGTTTTAGTGCTTGAATGCTGCATCGAGCACCGTTTTTGAT AGCACATCGTAGTTACAGTACGAGGTGTTTTGTTTTCCCGTGTAAGAGAA GGCGTTGTGGGACAGGACGGTACGATACAGGTCAGTCATACCGCACCATA CGAGAGCTTTGTTTTTGGTGCGAAGGGCAAAAGAGGAAGAAGGTTCGTAG GAATCCTGAAAAAAAAATGCCTCCGTACACCTCATGCAAAAAACAGCCAA ACGCACTTCGTGTGCCCGTCGCAGCAAAGAAACGTTCGGCATGAGGGTGT TCCAGAACCCCATTGGCCCAGTTAGTTAGGCAGTCGGTCAGTTGCATACG GTACACGGTACACGGTACACGGTACACGGTACAGAATTTCGACGTTGTGC CGCACCGCATCTCCATGTGGGTAATGGTGTGTATGATAGTCGATGCTTCT CCCCCCCGGTCCTCCCGTTCCGTTCTGTCGCCCCCCCCCCCCCCCCCCCC CGGCGTAAAAATGTGTCAGAGACCTCGACGCAGCCAGAGAGAAAGAAGAG CGCCTCCGATCTAGGGTCAAAACGCTCGGCAGCAGCACCAACAGAGGAGG AGCCGAAAGGGCTACGAGTGGCGGCGGCGGCAAGGAGAGGAGCAATCCCA AGAAGAAGACGAGGACCAGCCGTTCAGGCGGCAGGGTACCCGAGGAGAGC AAAGCTTCCTCGTCTTCGTCATCCGACGGCCACGGCGATGATGACAGCTA CTCCACCCCCGGAGCGGGCAGCGGAGGTGACAGCGGCGGCGGCGGCGGCG GCAAGCGGCGCCGTCTGAATGAGCTGGAGAAGCGCGTGCAGGTACGGTGT TGTTGGAGTGGATTCAACAGGGGGCGGGGGCGTGGCGGGGTGGTACACAA GTTGTGTCCCACCCCTTTCGGCTTCTTCGCCTTCGGGTGTGTGCTTTTCG ATTTCTGAATTTATTTTATACGAATGAATGCACCACGGCTTTTTTTTTGC CAGAAACGAGTGCTTCCTGTGTTCGACGTACATTGGTTTGGTTTGGTTTG GTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTCTGGTTTG GTTTGGGTCGGCTTGGCTTGGCTTGGTGTGGTTTGGTTTGGTTTGGTTTG GTTTGGTTTGGTTTGGTTTGGTTTGGTTCGGTTTGGTTTGGTTCGGTTCG GTTCGGTTTGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGG CTTGGCTTGGCTCTCGCCGTTCGTGGCTGCAAGTGTCGTGTCGCCAACGT CGCCGCAAGAGCGCTGCCCCCTTCTGCCTGCTACTGCCAAGTACACGCAC CGCGTTCGATCGACTCCGTCGCGATATTTCGGGCCCGAGCACCACGTTGT GCACGCCCTTTCTTCTACTGTACGGCTTCCGGCACTACCGCCACAACTCT GATGGCGTTGTGCCAAGTGCCAAGGTCGCTGCTTCCTTCCTTCCTTCCCT CCTTCCTTTCGCTTCTCCCGGTGTTGCAACTCTCAAGAAAACCTGGCACG TGCACAACGATGTCTGTCCCCCCCCTCCACGCGCCGCCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTTGCTGGTATGATATGTACCAGGTGCTCACCGCT CAGAACGCGGCGCTGAGGACCATCGTGCCGCCGCCCACCCCGGCGCCGTC CGACAAAAAAACGACCGCGGCTATCACGAAGGGGCAGGGTCGACGCCTGG GTTCGGGTGTGTCTGAAATGAAACTACACACCATACGGTACTCCGCCGTT TCATTGCTGTAGCCTTGGTTCTGTTTTGTCCCCACTCGACGTTGAGGACC ACGAACAGCACCTCACACGGTTCCGGTGCGCCGGCGTTACATATACCGCG ATGCGCGAGACCCTTGCATAGCATGCATGCAACGTTAGACGAGAATACCG CCACAGCAGCAGCAGCAGCAGTAAAAAGTAAAACAAAAAACGAGAGTCCT TGGGAGCCGCCAGAGTTTCCAACATATCACCCACTGACCACGGAAATCGT CCATGATCGGAGGAGTATGCGGACACTGCAAGGTCCTGAGAGGAGAGATC GGAATGGTTTTTCACGTCAAGACAACACGTTCATATGCACACTCACAAAC GCACCACAAACACACCACCGACAGAGGGGTGGCAAATAATGTACCTTCAC CTCCTTTTTCCGTCTCTCCCATCTCCTGTGTACATACACACACAGCGGCA GACGACGCTTCTCCAGACAACAACAACACCACCATCGCACCAGTGTCCGG AAGAGACCTAGCCACGAGCGGCAACGGCGGCGGCGGCGGCAACAGTGGCG GCGGCGGCACCGGTCATCGGGAGGCGGCGCACAGGGCCTGGGAGGCGGAA AAGAAGCTGCGAAGGCGGGTAGAGGCGTTGGAAAGGAGGCTGGAGGAGAG GGGTGTTGAGCTCCAGGCAGCCGAGGGACAGGCGGCCAGGGCGAAGGACC TCCTCACAAGGCGAGAGGAAGCTGGGTGGAAGGACCGGTGTTGTCGTTGT TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCGTTGTTGCTG TTGTCGTTGTTGTTGTTTGCCGCCTGCAGAGCTCGTGTTTCGGGAACTGG CTCGCTGTATTGTATTTTTCTTTTGTTTAAGATAAAAACCTGGCCCATTG AAGGTCAAGTTTTGTTGGACTCTTCGCTCTCTTCAAAACCCCTGCACTGC TGTGCACAATACTTTTTTTTCTTCGAGACATTGTTGTTGATCTTCATGTC TAATATATACCAGGTAGAGCTTATGCACGGGGCAAGGGTGCCTATCTTCA CAAGCATTGCGATCCTCTTGCTCCACCTGACTGAATGGCCTCATTCTCCC GCTGTTGTTTTTTTTGGGCACTAAACTTTGCCCTTTCGCACCTGCCCGTG AAACAACACACACCAGGACGACCAAGGAAAAAGACGCCGCGTTGCGGAGG CTCAAGGACGCGGGCCAGGGCCATGACGGGGTAGGTTCCCCTGTTGTTTC CACTGCTGTGACCCCCTCGGTGTCGTGTCTTTTGTGTCCCAATCGGTGTG TGTGTGTTTTTTTTTTTTCGCATTTTCTCAGTATCATAGAGGGTACATAA GATACCTGTACCAACCATCCTGTTGCCGTTGCTTTTGTTCGTGGGGCGCT TGTGTGTCTCGTACACGAAGTATATCGTGGCTTTGTTGCTGTTTAAGGGC GAGTTGTTTCAAAGCATGGTACCTCTTCGCGCCCGTGTCTCGCCTCGCCT CGTGTTCCGTGACGTTTTGCGGTCTTCTTCACCAGTGCTATCATATCCAT AAACTGCATACTTTTCGTTCGTACTTTTTTTTTTGTTCCATCAGCTAGCT GTAAAAAATACTCCGGAGTATATATTTTCTACGACACCAACTACTGTACG TTTAGCATCGTGAGCACCTCCCGTTGGGGAGATACAACATGCGCCCCAAT TAATCCTGTCCTAACTTGTGTGACAGAGGAAGTATTACCTGGTACGAAGT ATATGTTTATTGTGTTTATGTACAAGCTTATCATATGTATATGCATTCTT TCTTTTGAGACAAAACAAAGACGTCGCGCCCTGCGATATCTGATCCGTTC CGTTTGTCGCCTGCGATGATAGGGCGGACGCGCGGGAGCCGGATCATCGC CCGAGGTGGCAGAAGAGTTGCGGGCTCGTCTGTTCCTGCTGGAGGAAGAA AACGCCTCTTTGAAGAGAGCTGCGGAGTTGGAACTCCCTCGTGAAATCGA CTCCCTTAAGCACCAGGTGAGAATCCTTATAAACCTTGTGTCGCGCGGTT CATCGAACCGTGAAGGTGGGAATGCGCCCAGAAAGGAGCAACTGAAACGT GCAGGTGTTTCCCGATCGTTCAGGTATGGGTGTGTGCAGAAAGGAATAAC CAACCTCCCGCCTCGACGAAACAACGTCGATTGTGAAACAAATCTCTCTC GCGGAAATGTATTTCCTCCAGTACCAGGTGGAATTGTCGTATTCGTCGCG CCGATTTCCAACCGTGGTGATGGGTTGTATCGTATCATACATGTACGAGA TTCGCCTTTTGGCTTTGAGGAAAACGTGCCGATAATCACCTTTTTTTGAG GGAAAGTCTGTCGTGTTGAAATTCGTAGAAGAAACAAAAAAGGGAAAAAC TCCCTCGCGACGTAGGTAGAATCCCTAAATAGCAGCAGCAGCAGCAGCAG CAGACAAGGAGCAACAAAATATGGCATTTCACACGCAAGCTTTGGTTCAT GATGATGCAAATTTTGCAGCATACGGTAGTTCTAATAGGTCCTGAGCCAC AGAGGAGCTATTGAGTTTATTGTTTGTTGCATGCAAGCTTGAGTGCATGT GTGGTGATTCGACGCGCAGTCATTTCTGTTTTATTTTTGCTCCAGAGTAC CCTTTCCAAGTCCTGAAAAATTCGAAAGCAAGCCAACCCAATTGAAATGA TTTCTACCGGCTGGTGTGGAGTAATACTGTATCGTAGGGTGCCTAATTTC TGCTGCAAACCACTCTCCCGCACCTGCCAATGCATAAACGTCCCGGGAGG GACGAGAACTCCACATGCACACATTTTGTATTAAAACATGTCAGTCGTAT CATAGAGGTTTGTCGGCTAATTGCGGACATAGCGAACAACAACCTTGATC TGACCTCACGCAGTGATGATTATTTCGCTCACCGCACCTCATTTCGCGCA GCAGAGTCATATTGCTGAACCGATTGCCTTGACCTCCCATCGGCCGCCTC TCGTGTGTGCTTGCTGCGGCATCTCGAAACCACCGCTACGAAGGTACGAG CCCTGCGCGCTCAGCTGGAAGAGACGGACGACCAGCTCGAAGAGGCGGAA CGACGCGCTAAGGTCGCCGTCTCGAGAGCTCTCGACGGCGGCGACTCGGA CGTCGGCGGTGGCGGCGGTATTCTACGGGCGGAGGAGGGACTGTTTCATG ATCTGCAGGCGGCGCGGGACGAGCTGTCGGCGCTCAAGGCTGTCCGCAGG GAGCTGGAGGGGCAGGTATCCTTTGCCACTTTTTTTTTCTGTGGGGGAAG GGGAGAAAACCGCACTACCCGCGATCCACAGCCACGTGCGAGTCACGCAA ACGAGCAAGCTGCAGGCAACAAAGTCGGAGCTATTTTGCTGGAGAGATAT AAACGGTGCCCACCCGCCCCACGCCCCCCAGTGTCCCCCCTGAGATGCGT GTTCCATTTTCCAGAGACAAAAAAGTGCACAAAGCAAGAAGTGACCGCCC TTCCTCACCGGTTCAACTTCCATCGACTCCCTCCCCCGCCCTCCCTCCCT GCACGGTGGTCGAGCTCTGATTTTTTTTTGGTGTTTTCTTGCGCTGAATC GCGCACTCAGCACGATGGCGCCCTCGCACTCGCGCTCGCGGTGACTTTTC CCCTCGCTTCATGGTAAATTTGAGCTTCCCATCCGAAGGCATACCTGGCG CACCGGGCACTGCTTTGCGTACAGTTTTTTTTCTTTTTTTTTGGCCGTTC TTCTGAGCCTCGGAAACGTGCTTTGGATTTTCTTTCTTGATGATGGCACC GCGCACAACAAGATGAGCACATTAGCCCTGGTTCCTTCCGTCGGCAAGTG AACGTTCGTCTCGTTTCATCTCGCGGTACCAAATCTGGGTTTCGCCTCAG GTGCTAGAGCGCGACTCGGTCAACATGGAGCTCCGGTTCGATCTGGAGGC GAGGTCAGCAGAGACGGAACGGCTCCGGCGAAGAGCTAAGGAGCTCCAAG CCGCCCTGAGAAGCCAAGGAGTAGGGGTAGGTTCCGGCGGCGGCGGCGGC GGGGTGGCGAAGGACGCTGCAGCCTCGAGGCCGGCCGGCGGCCGGTTCAA GCGAGAGAGGTTTGTCGTTCTTTGTGGTCGTGGATAGTTTAGTCGTGCAC TCTCGACTGATGCCCAGAATACACGGGACGAAAAAAAAAACACACACACA CATACACACACAATCTCTCTCTCTCTCTCTCGCTCTCTCTCTCTCTCTCT CTCTCTCTCTCTCTCTCTCTCTGTGTCGACAGGCTCCTCATGGTGTGTGT GTGTGCGTTCGTGTGCGTGTGTACGAAACCGTTAGACCCAGTCCCACCGC TCACGATGGCAGCGTTCCCAATAAAGCGACTCGTGCACGAACGCGTGCGC ACGCTGTGCTGCCGTAGCGTATTTCCGGTGGGAGATTTGGGGGGTCCCGT GATGAAATGCGCCGCAAAACGCCCGATTTTGCACCGTTTTCTCGGCCTGT GTGCTCACCTCGTCGCTTTCCTGCCTGTTGAAATGTTCCTGTAGAATACC ACAAGTAGTACGGCCTGCTGTGTGATACCACTTGATTGACGCACATCTCG CCCCCCTCCCCCTCCGCGTTCCATGCCAGGGATCTCGAGGGAGTGGTAGA TGCTCTCAAGCGTGTGACCGACAAGCTTAGGGGTGAGAACGACCGGCTGC GGAGAGTGGCAGGGGAAGGCGGCGGTCGGGCCGAGGCGGAGAGGAGCGCA CGGGCGGCAAAGAAAAAAGCGGCAAGTTACTCTTCTCCCAGCTTTTTTCC CACTCCAACTTACCCCGGAAAAAACCACACCGTAAACTTACTTCGTTGTT TTTCCCGCAGCCGATGGGCTCCGGTATGATGGGCGCAGCTTCGCAGTCCG TACTTGTACTCTTGGTGCGATTGGCGGGCGCAGACTGCGTCTCTATAGGC GGCTTTTGCGTCTATATGGTTCATCAGTGCTAGTATTTTTGTTTATTCTG ACCACGGGAAGCGAAAAATTGTGCAGCGGCGCAACCCTTTTACCCCCCCC CCCTGTGAAAAATCATGGAAGATCGTTTTTTTTTACAACAGTTCTTCAAA AGCAAGGGGACGCGTCGCCAAAAAATGGCGACGCGTTCACTTGCCTAAAG AATGCGTTTTGAAACTAAACTGAGCGGTTAGCGAGGTAAAAAGTCTATAG CTATTGAGAGTCACTTGATATCCCAAGTGACGGGTAAAACAAAATGGGGA ACCAAGATGGCGACATTTCTCCACATGGGGTAAGTAAGAGGGTTGAGGAA GACTTACAAGAAGTAATTTGTTTCGCGTCTTTTTTTCACGTCCAGGCGGC GCTGCAGGAGGAGGTTGAAAGGTTGACGGCCAGGGCGAAGGACGCCGATG CCGCTGTTCAGAAGCTAGCTCAGAAGCAGGTCTGTCTTTCTTGTTTGATT TTAGGATGGGGACAAGGGGGGGGTGACTGGTAGAGGGAAGAAGGGAGGGC GCTTTGGGGTGTTGTTGGTGGTGACGCGTTGTGTCGGTAGTGTTGGGAGA GGTCGCGGGTGCTGATGGCGTTAGTTTCTGTGGTTGCTCCTGTTTCCCCC CATTTCGTTTGGGCACCGTCGGAAAGCCCAAAACCCTTCAATGTTGTTTC TTTCCGGAGCTCGACGCCACACTTAGTTGCCGTACAGTTTATACGGGCAC ATGCAGGCGTGTGTGTGGCCGTGTACGAAAGAGCCAAATCTCTTGTCGCC ATGGATTGAACTCACATTTACGGAATGGAAACCCCCGCCACCCACTTTCG TAGGACCTGGTGAACCAGCTTCGACGCAAGCTGAAGGCGCGGGACGAGGA TCTGAGGACGTTCCAAGAGCGTGCGGAAGATCTCGCCGAGACAAAGACGC TCCTTTCGGCGGGTGGGTTTCGTCTTCTTTTTTATCTCTCTACACATTCG TGTCTGTCCCGCTCTCTCTCTGTGTGTCTTGTGCTATCCCTCTTCTCTCC TTTCTCCCTTTCTCTCTGGGTATTTTCTCTCCCTCTCTGCGTGTGTTTAG TCGCTGTGTGTTTCCACTTTTCTCTGATCGTGTGGCTCCTCTGCCGGCGC CCTCTCGACCCAAGGTTTACCCGCAACAAGCTACACTTACATAGGCCAGG CAGCGCCTGCCCCCGCCCGCGAGTCGAACCGCACAGCAGTACATGAGATG CTAGTCTTTACCTACCTGCGGTGACGTCGGGGCGAAAATCGTTGCCGTTT TCCTCACCTACACACTACCAAGTTATCATCATCGATTTTTTTGCAGCCCT GCGGCGTTCATTTTACGACACGTGGTTGGAACTCTACATGTATATGATAT TCGCGCGATTATTTCAGCACGCAACTTTTTCCTCCTCGTTGTTCCCCGCG CTTCCCACTACCTGTGGCCCTCTTCCAGGTCAGCTGGCCATCCATAATCA AGCAGTGCACGTAGTTTCCCCCCCCTCCCCTCTCAACTATTGCGCCCCTC TTTCCACACGTGTCCCGCCCCCTCCATGGCGTTTTTTGCCGCCAGAACTG GAGGCCGCAAACCAACGCTTGGTCGCAAGCGACCGCGAATACCGGTCCTC GGGTAGGTCCCGAGCTGCAGATGCCGCAGCACATTCCGCCAGAGAAGCGG AGGACGCGAAGAGGGCGGCGGCGACGCTGCGGCAGCAGGTGCAGCACCAA TCGGAGGTGATCGACCGTCTGAAACGGGACGTCGGAGATCGGGGCGGTCA CGGCCGTGACGACCGAGAAACGACGGCGGCGGGGGCGGTAGCGGGGGGAA TACGCAAAGCCGTCGAAGCGGCGGAAGCCGCTGCGGAGGCGGCGCAGGAC GAAGCCGACGAGCTGAGAGACCGTCTCGCGGAAACCGAATGGGAGTTGCA GCGTATGGAAAGGCGCAGTGCGATGTCGGGGGGTCGGGGGGGGGATGTTG TTGCAGCGGACGGGAGCCTTCGAGCGAGCAGCACCGGTTTGGCGTCGTCA GGCGGTGTTGCTGCCGGCGAGAGGGAGCTTCGTTTGGAGCAGGAGAATCG GAGGCTGAGGGAGGAGCTTCAGGCGTTTGATCTGGACTTTTTCGAAGAAA TCGAAGACCTCAAGTACAAGTACAGCGAGGCCGCCAGGAAGCTCCGGCAG TACGAGTGA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig109:280338..290546-

>mRNA_P-littoralis_Contig109.59.5 ID=mRNA_P-littoralis_Contig109.59.5|Name=mRNA_P-littoralis_Contig109.59.5|organism=Pylaiella littoralis U1_48|type=CDS|length=2451bp|location=Sequence derived from alignment at P-littoralis_Contig109:280338..290546- (Pylaiella littoralis U1_48)
ATGCTTTATATTCAGGAATTCGTGCAGTCGGAGATAGACAGGGAGGCCGC
GGCCATCGCCGATGACAGGGAGCGAGCGAGGAAGGCGGAGGACCGATCTG
CCGGTGTCGACGACAGGCTCAAGAAGCTCAGGGAACAGGTTTCCACTCTG
CAAGAGGGCGTGTCTCAGCAGGCCGCCCGTGACATCGAGAGGGAGCGGCG
GGGGCGGGAGAGCGCCACGAGGGCCAAGGAGAAGCTCCTCGATGACAACG
CACGACTCCGCGCGGAGATGACGAAGGCCGAGGAGAGAGCAGCCTCGCTG
GAAGACCGCTTGACGGAGACCAGGCGAGACCTCGACGCAGCCAGAGAGAA
AGAAGAGCGCCTCCGATCTAGGGTCAAAACGCTCGGCAGCAGCACCAACA
GAGGAGGAGCCGAAAGGGCTACGAGTGGCGGCGGCGGCAAGGAGAGGAGC
AATCCCAAGAAGAAGACGAGGACCAGCCGTTCAGGCGGCAGGGTACCCGA
GGAGAGCAAAGCTTCCTCGTCTTCGTCATCCGACGGCCACGGCGATGATG
ACAGCTACTCCACCCCCGGAGCGGGCAGCGGAGGTGACAGCGGCGGCGGC
GGCGGCGGCAAGCGGCGCCGTCTGAATGAGCTGGAGAAGCGCGTGCAGGT
GCTCACCGCTCAGAACGCGGCGCTGAGGACCATCGTGCCGCCGCCCACCC
CGGCGCCGTCCGACAAAAAAACGACCGCGGCTATCACGAAGGGGCAGGGT
CGACGCCTGGGTTCGGACGACGCTTCTCCAGACAACAACAACACCACCAT
CGCACCAGTGTCCGGAAGAGACCTAGCCACGAGCGGCAACGGCGGCGGCG
GCGGCAACAGTGGCGGCGGCGGCACCGGTCATCGGGAGGCGGCGCACAGG
GCCTGGGAGGCGGAAAAGAAGCTGCGAAGGCGGGTAGAGGCGTTGGAAAG
GAGGCTGGAGGAGAGGGGTGTTGAGCTCCAGGCAGCCGAGGGACAGGCGG
CCAGGGCGAAGGACCTCCTCACAAGGCGAGAGGAAGCTGGGACGACCAAG
GAAAAAGACGCCGCGTTGCGGAGGCTCAAGGACGCGGGCCAGGGCCATGA
CGGGGGCGGACGCGCGGGAGCCGGATCATCGCCCGAGGTGGCAGAAGAGT
TGCGGGCTCGTCTGTTCCTGCTGGAGGAAGAAAACGCCTCTTTGAAGAGA
GCTGCGGAGTTGGAACTCCCTCGTGAAATCGACTCCCTTAAGCACCAGGT
ACGAGCCCTGCGCGCTCAGCTGGAAGAGACGGACGACCAGCTCGAAGAGG
CGGAACGACGCGCTAAGGTCGCCGTCTCGAGAGCTCTCGACGGCGGCGAC
TCGGACGTCGGCGGTGGCGGCGGTATTCTACGGGCGGAGGAGGGACTGTT
TCATGATCTGCAGGCGGCGCGGGACGAGCTGTCGGCGCTCAAGGCTGTCC
GCAGGGAGCTGGAGGGGCAGGTGCTAGAGCGCGACTCGGTCAACATGGAG
CTCCGGTTCGATCTGGAGGCGAGGTCAGCAGAGACGGAACGGCTCCGGCG
AAGAGCTAAGGAGCTCCAAGCCGCCCTGAGAAGCCAAGGAGTAGGGGTAG
GTTCCGGCGGCGGCGGCGGCGGGGTGGCGAAGGACGCTGCAGCCTCGAGG
CCGGCCGGCGGCCGGTTCAAGCGAGAGAGGGATCTCGAGGGAGTGGTAGA
TGCTCTCAAGCGTGTGACCGACAAGCTTAGGGGTGAGAACGACCGGCTGC
GGAGAGTGGCAGGGGAAGGCGGCGGTCGGGCCGAGGCGGAGAGGAGCGCA
CGGGCGGCAAAGAAAAAAGCGGCAATAATTTGTTTCGCGTCTTTTTTTCA
CGTCCAGGCGGCGCTGCAGGAGGAGGTTGAAAGGTTGACGGCCAGGGCGA
AGGACGCCGATGCCGCTGTTCAGAAGCTAGCTCAGAAGCAGGACCTGGTG
AACCAGCTTCGACGCAAGCTGAAGGCGCGGGACGAGGATCTGAGGACGTT
CCAAGAGCGTGCGGAAGATCTCGCCGAGACAAAGACGCTCCTTTCGGCGG
AACTGGAGGCCGCAAACCAACGCTTGGTCGCAAGCGACCGCGAATACCGG
TCCTCGGGTAGGTCCCGAGCTGCAGATGCCGCAGCACATTCCGCCAGAGA
AGCGGAGGACGCGAAGAGGGCGGCGGCGACGCTGCGGCAGCAGCGTATGG
AAAGGCGCAGTGCGATGTCGGGGGGTCGGGGGGGGGATGTTGTTGCAGCG
GACGGGAGCCTTCGAGCGAGCAGCACCGGTTTGGCGTCGTCAGGCGGTGT
TGCTGCCGGCGAGAGGGAGCTTCGTTTGGAGCAGGAGAATCGGAGGCTGA
GGGAGGAGCTTCAGGCGTTTGATCTGGACTTTTTCGAAGAAATCGAAGAC
CTCAAGTACAAGTACAGCGAGGCCGCCAGGAAGCTCCGGCAGTACGAGTG
A
back to top