mRNA_P-littoralis_Contig109.6.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig109.6.2
Unique Name	mRNA_P-littoralis_Contig109.6.2
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig109.6.2 vs. uniprot
Match: D8LQ95_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ95_ECTSI)

HSP 1 Score: 431 bits (1109), Expect = 2.690e-147
Identity = 227/310 (73.23%), Postives = 249/310 (80.32%), Query Frame = 2

Query:  116 MGLRREMVVATSLLSLMAMVSGYLPPSFFSPDGYMTGCGSTATTAVATCSTGTAVPPPRRQAY---TRLSLNKEDLPDESIRQIAAANQRVKDLEEEYWKSLDADEIAIERKCASGLACLKAPGMLEKAAEYYTSASELSPPSARTWPLGLVLYYLGRYEEAAVRLDTDIRSFEKQFEECATDERIWQAAAWIRGAGEAGADVEQVAAALPPLSIPEPNALRRTVYNMFRGGDTPEDVQRVAKLNADGIDYLGVEFFFKVFMGLYHDAHRNEDEAERYIIAACESKYPKPDDLWYHTPRIHAKARGWTIP 1036
            M L   + VAT LLSL A  SG+L PSF        GC     TA A CS   A  PP   A    +RL L KEDLPDE++RQ+A A + +K+LEEEYWKSLD DEIAIE+KCA+GLACLKA GMLEK  EYYTSA++LSPPSARTWPLG++LYYLGRYEEAAVRLDTDIRSFEKQFEECATDERIWQAAAWIRGA EAGADVEQVAAALPPL I EPNALRRTVYNMFRGG TPEDVQ+VAK+ A GIDY GV+FF +VF+GLYHDAH NE EAE YI+AAC + YP PDDLWYHTPRIHAKAR WTIP
Sbjct:    1 MVLGGRLSVATLLLSLPATASGFLIPSF------CRGC-----TARAWCSAAAADRPPSADAARRRSRLPLKKEDLPDETLRQMADAGRALKELEEEYWKSLDPDEIAIEKKCAAGLACLKA-GMLEKGCEYYTSAADLSPPSARTWPLGVILYYLGRYEEAAVRLDTDIRSFEKQFEECATDERIWQAAAWIRGAREAGADVEQVAAALPPLPISEPNALRRTVYNMFRGGPTPEDVQQVAKVGAGGIDYFGVDFFSEVFLGLYHDAHGNELEAETYILAACGNTYPNPDDLWYHTPRIHAKARNWTIP 298

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BLAST of mRNA_P-littoralis_Contig109.6.2 vs. uniprot
Match: A0A6V1TMQ8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TMQ8_HETAK)

HSP 1 Score: 86.7 bits (213), Expect = 1.610e-15
Identity = 60/213 (28.17%), Postives = 105/213 (49.30%), Query Frame = 2

Query:  389 EEEYWKSLDADEIAIERKCASGLACLKAPGMLEKAAEYYTSASELSPPSARTWPLGLVLYYLGRYEEAAVRLDTDIRSFEKQFEECATDERIWQAAAWIRGAGEAGADVEQVAAALPPLSIPEPNALRRTVYNMFRGGDTPEDVQRVAKLNADGIDYLGVEFFFKVFMGLYHDAHRNEDEAERYIIAACESKYPKPDDLWYHTPRIHAKARGW 1027
            +++ W  LD DE  + R  A+    ++     E A  Y+  A ++   +A  W  G++LY LG+++EA  +L  +IR +E  FE+ AT+ERIW  A+  RG      D +  + +L    + E   + +    +F  G+  ED + +  +     DY     + + ++G+  +A    D+A++YI +A E    K DD   H  ++H   RGW
Sbjct:   47 DDDVWDQLDDDERQLRRNVATAKELIRMK-QAEDALLYFDKAVQIKE-NAFLWQRGVLLYLLGKFDEAHDQLSRNIRHYENVFEQPATEERIWMLASEKRGDLLVVPDQQPFSISLEEEELKESRVVLKKA-ELFLAGEIGED-EVMETIERTKSDYWAC--YGQYYLGVGMEARNQMDKAQKYIRSALEVSPLKEDDAGLHMMQLHGHIRGW 253

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BLAST of mRNA_P-littoralis_Contig109.6.2 vs. uniprot
Match: A0A1Z4SDC6_9NOSO (Uncharacterized protein n=2 Tax=unclassified Nostoc TaxID=2593658 RepID=A0A1Z4SDC6_9NOSO)

HSP 1 Score: 76.3 bits (186), Expect = 2.610e-12
Identity = 49/161 (30.43%), Postives = 80/161 (49.69%), Query Frame = 2

Query:  545 WPLGLVLYYLGRYEEAAVRLDTDIRSFEKQFEECATDERIWQAAAWIRGAGEAGADVEQVAAALPPLSIPEPNALRRTVYNMFRGGDTPEDVQRVAKLNADGIDYLGVEFFFKVFMGLYHDAHRNEDEAERYIIAACESKYPKPDDLWYHTPRIHAKARGW 1027
            W  GL  YY  R+ E A + + D+    +  EE      +W+     R  G     V++   +L  +   +P  + +TVYN++ G  TP+DV  V KL  D  +     F+  +++GLY++A  N D A+ YI+ A ++ Y   D +WY   ++H K R W
Sbjct:   63 WQRGLSYYYAERFAEGAQQFEIDLTVNAQDVEET-----VWRYLCMARLVG-----VKEARNSLLTVKN-DPRRIMQTVYNLYAGNCTPDDVLTVGKLEGDRGN-----FYSHLYLGLYYEAENNLDLAQEYIVKAADN-YKIDDYMWY-LAQVHKKLRAW 205

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BLAST of mRNA_P-littoralis_Contig109.6.2 vs. uniprot
Match: UPI001683F6F1 (hypothetical protein n=1 Tax=Anabaena sphaerica TaxID=212446 RepID=UPI001683F6F1)

HSP 1 Score: 70.5 bits (171), Expect = 2.550e-10
Identity = 51/183 (27.87%), Postives = 90/183 (49.18%), Query Frame = 2

Query:  482 LEKAAEYYTSASEL-SPPSARTWPLGLVLYYLGRYEEAAVRLDTDIRSFEKQFEECATDERIWQAAAWIRGAGEAGADVEQVAAALPPLSIPEPNALRRTVYNMFRGGDTPEDVQRVAKLNADGIDYLGVEFFFKVFMGLYHDAHRNEDEAERYIIAACESKYPKPDDLWYHTPRIHAKARGW 1027
            +E++ + + +A +L S  +   W  GL  YY  R+ E A + + D+    +  EE      +W+     R +G     V +   +L P+   +P  + R+VY++F G  T +DV  V KL       L   F+  +++GLY ++  N + A+ YI+ A ++ Y   D +WY    +H + RGW
Sbjct:   41 IEESIQDFDTAEKLDSRLTPYLWQRGLSYYYAARFAEGAKQFEIDLTVNAQDVEET-----VWRYLCTARLSG-----VTEARNSLLPVKN-DPRKIMRSVYDLFAGNCTTDDVLNVGKLGG-----LKGNFYNHLYLGLYFESEGNLELAQEYIVKAADN-YKIDDYMWYLAV-VHKQVRGW 205

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BLAST of mRNA_P-littoralis_Contig109.6.2 vs. uniprot
Match: A0A6P0ZH85_9CYAN (Uncharacterized protein n=2 Tax=unclassified Sphaerospermopsis TaxID=2646443 RepID=A0A6P0ZH85_9CYAN)

HSP 1 Score: 70.1 bits (170), Expect = 3.460e-10
Identity = 52/185 (28.11%), Postives = 90/185 (48.65%), Query Frame = 2

Query:  476 GMLEKAAEYYTSASELSPP-SARTWPLGLVLYYLGRYEEAAVRLDTDIRSFEKQFEECATDERIWQAAAWIRGAGEAGADVEQVAAALPPLSIPEPNALRRTVYNMFRGGDTPEDVQRVAKLNADGIDYLGVEFFFKVFMGLYHDAHRNEDEAERYIIAACESKYPKPDDLWYHTPRIHAKARGW 1027
            G +E++ + + +A  L    +   W  GL  YY  R+ E A + + D+    +  EE      +W+     R +G     VE+   +L  +   +P  + R+VY++F G  T +DV  V KL       L   F+  +++GLY++A  N + A+ YI+ A ++ Y   D +WY    +H + RGW
Sbjct:   39 GKIEESIQDFDTAETLDAQITPYLWQRGLSYYYAERFTEGAKQFEIDLTVNPQDVEET-----VWRYLCIARLSG-----VEEANNSLLTVKN-DPRKIMRSVYDLFAGNCTNDDVLNVGKLAG-----LKGNFYSHLYLGLYYEAEGNFELAKEYIVKAADN-YKIDDYMWYLAV-VHKQVRGW 205

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BLAST of mRNA_P-littoralis_Contig109.6.2 vs. uniprot
Match: A0A252EBR8_9NOSO (Uncharacterized protein n=3 Tax=unclassified Nostoc TaxID=2593658 RepID=A0A252EBR8_9NOSO)

HSP 1 Score: 68.2 bits (165), Expect = 1.590e-9
Identity = 49/183 (26.78%), Postives = 90/183 (49.18%), Query Frame = 2

Query:  482 LEKAAEYYTSASELSPP-SARTWPLGLVLYYLGRYEEAAVRLDTDIRSFEKQFEECATDERIWQAAAWIRGAGEAGADVEQVAAALPPLSIPEPNALRRTVYNMFRGGDTPEDVQRVAKLNADGIDYLGVEFFFKVFMGLYHDAHRNEDEAERYIIAACESKYPKPDDLWYHTPRIHAKARGW 1027
            ++++ + + +A +L P      W  GL  YY  R+ E A +   D+    +  EE      +W+     R +G     VE    +L  +   +P  + R+VY+++ G  TP+DV  V K  ++G+      F+  +++GLY++A  N + A+ YI+ A ++ Y   D +WY   ++H   R W
Sbjct:   41 IDESIQDFDTAEQLDPRLKPYLWQRGLSYYYAERFAEGAQQFKIDLTVNAQDVEET-----VWRYLCIARLSG-----VESARNSLLTVKN-DPRRIMRSVYDLYAGNCTPDDVLNVGK--SEGVKG---NFYSHLYLGLYYEAENNLELAQEYIVKAADN-YKIDDYMWY-LAQVHKNLRKW 205

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BLAST of mRNA_P-littoralis_Contig109.6.2 vs. uniprot
Match: A0A1Z4QM28_9NOST (Uncharacterized protein n=1 Tax=Cylindrospermum sp. NIES-4074 TaxID=2005457 RepID=A0A1Z4QM28_9NOST)

HSP 1 Score: 67.0 bits (162), Expect = 3.950e-9
Identity = 47/162 (29.01%), Postives = 80/162 (49.38%), Query Frame = 2

Query:  545 WPLGLVLYYLGRYEEAAVRLDTDIRSFEKQFEECATDERIWQAAAWIRGAGEAGADVEQVAAALPPLSIPEPNALRRTVYNMFRGGDTPEDVQRVAKLNADGIDYLGVEFFFKVFMGLYHDAHRNEDEAERYIIAACESKYPKPDDLWYHTPRIHAKARGWT 1030
            W  GL  YY  R+ E A + + D+    +  EE      +W+     R  G     V +   +L  +   +P  + R+VY++F G  TP+DV  V +  ++G   L   F+  +++GLY++A  N D A+ YI+ A ++ Y   D +WY   ++H   R W+
Sbjct:   63 WQRGLSYYYAERFAEGAQQFEIDLTVNAQDVEET-----VWRYLCIARAEG-----VLEARNSLLTVKN-DPRRIMRSVYDLFAGNCTPDDVLTVGE--SEG---LKGNFYSHLYLGLYYEAENNLDLAQEYIVKAADN-YKIDDYMWY-LAQVHKIVRKWS 206

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BLAST of mRNA_P-littoralis_Contig109.6.2 vs. uniprot
Match: A0A6M0EVX6_9CYAN (Uncharacterized protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A6M0EVX6_9CYAN)

HSP 1 Score: 65.9 bits (159), Expect = 9.820e-9
Identity = 47/161 (29.19%), Postives = 72/161 (44.72%), Query Frame = 2

Query:  545 WPLGLVLYYLGRYEEAAVRLDTDIRSFEKQFEECATDERIWQAAAWIRGAGEAGADVEQVAAALPPLSIPEPNALRRTVYNMFRGGDTPEDVQRVAKLNADGIDYLGVEFFFKVFMGLYHDAHRNEDEAERYIIAACESKYPKPDDLWYHTPRIHAKARGW 1027
            W  GL  YY  R+EE A +   D+    +  EE      +W+     R  G A A    +A    P S+       R+VY +F G  T EDV  V +  +     +  +F+  +++GL+++A  +   A  YI+ A    Y   D +W H  R+H   RGW
Sbjct:   63 WQRGLSYYYAERFEEGARQFQLDLSVNPQDVEET-----VWRYLCIARLKGVAEARNSLLAVKNDPRSV------MRSVYGLFAGNCTREDVLAVGEKES-----IRGKFYSNLYIGLHYEAQADSIHAREYIVRAAND-YQLDDYMW-HLARVHQALRGW 205

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BLAST of mRNA_P-littoralis_Contig109.6.2 vs. uniprot
Match: A0A3S1BXP9_ANAVA (Uncharacterized protein n=5 Tax=Nostocaceae TaxID=1162 RepID=A0A3S1BXP9_ANAVA)

HSP 1 Score: 65.5 bits (158), Expect = 1.330e-8
Identity = 48/183 (26.23%), Postives = 91/183 (49.73%), Query Frame = 2

Query:  482 LEKAAEYYTSASEL-SPPSARTWPLGLVLYYLGRYEEAAVRLDTDIRSFEKQFEECATDERIWQAAAWIRGAGEAGADVEQVAAALPPLSIPEPNALRRTVYNMFRGGDTPEDVQRVAKLNADGIDYLGVEFFFKVFMGLYHDAHRNEDEAERYIIAACESKYPKPDDLWYHTPRIHAKARGW 1027
            +E++ + + +A +L S  +   W  GL  YY+ R+ E A + + D+    +  EE      +W+     R +G     V +   +L P+   +   + R+VY++F G  T +DV  V KL       +   F+  +++GLY++A  N + A+ +I+ A ++ Y   D +WY + ++H   R W
Sbjct:   41 IEESIQDFDTAEKLDSKITPYLWQRGLSYYYVERFAEGAKQFEIDLTVNSQDVEET-----VWRYLCIARLSG-----VTEARNSLLPVKN-DSRQIMRSVYDLFAGNCTTDDVLNVGKLQG-----VKGNFYSHLYLGLYYEAEDNWELAQEFIVKAADN-YKIDDYMWYLS-QVHKNLRKW 205

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BLAST of mRNA_P-littoralis_Contig109.6.2 vs. uniprot
Match: A0A1B7W4K8_9NOST (Uncharacterized protein (Fragment) n=1 Tax=Anabaena sp. MDT14b TaxID=1710886 RepID=A0A1B7W4K8_9NOST)

HSP 1 Score: 62.8 bits (151), Expect = 3.140e-8
Identity = 45/158 (28.48%), Postives = 77/158 (48.73%), Query Frame = 2

Query:  554 GLVLYYLGRYEEAAVRLDTDIRSFEKQFEECATDERIWQAAAWIRGAGEAGADVEQVAAALPPLSIPEPNALRRTVYNMFRGGDTPEDVQRVAKLNADGIDYLGVEFFFKVFMGLYHDAHRNEDEAERYIIAACESKYPKPDDLWYHTPRIHAKARGW 1027
            GL  YY  R+ E A + + D+    +  EE      +W+     R +G     V +   +L P+   +P  + ++VY++F G  T +DV  V KL       L  +F+  +++GLY++A  N   A+ YI+ A + +Y   D +WY    +H + R W
Sbjct:    1 GLSYYYAERFAEGAKQFEIDLTVNAQDVEET-----VWRYLCIARLSG-----VTEARNSLLPVKN-DPRKIMKSVYDLFAGNCTTDDVLNVEKLAG-----LKGKFYSHLYLGLYYEAENNLPLAQEYIVKAAD-EYKIDDYMWYLAV-VHKQLRKW 140

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig109.6.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig109.6.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12


Match Name	E-value	Identity	Description
D8LQ95_ECTSI	2.690e-147	73.23	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6V1TMQ8_HETAK	1.610e-15	28.17	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A1Z4SDC6_9NOSO	2.610e-12	30.43	Uncharacterized protein n=2 Tax=unclassified Nosto...	[more]
UPI001683F6F1	2.550e-10	27.87	hypothetical protein n=1 Tax=Anabaena sphaerica Ta...	[more]
A0A6P0ZH85_9CYAN	3.460e-10	28.11	Uncharacterized protein n=2 Tax=unclassified Sphae...	[more]
A0A252EBR8_9NOSO	1.590e-9	26.78	Uncharacterized protein n=3 Tax=unclassified Nosto...	[more]
A0A1Z4QM28_9NOST	3.950e-9	29.01	Uncharacterized protein n=1 Tax=Cylindrospermum sp...	[more]
A0A6M0EVX6_9CYAN	9.820e-9	29.19	Uncharacterized protein n=4 Tax=Cyanobacteria TaxI...	[more]
A0A3S1BXP9_ANAVA	1.330e-8	26.23	Uncharacterized protein n=5 Tax=Nostocaceae TaxID=...	[more]
A0A1B7W4K8_9NOST	3.140e-8	28.48	Uncharacterized protein (Fragment) n=1 Tax=Anabaen...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig109	contig	P-littoralis_Contig109:43209..47377 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	3656.XP_008453971.1
Model size	1437
Max annot lvl	35493\|Streptophyta
Hectar predicted targeting category	signal peptide
Exons	5
Evalue	6.38e-16
EggNOG OGs	28IPX@1\|root,2QR10@2759\|Eukaryota,37K9U@33090\|Viridiplantae,3G9QV@35493\|Streptophyta,4JI4E@91835\|fabids
Ec32 ortholog description	Tetratricopeptide-like helical domain
Ec32 ortholog	Ec-26_005640.1
Cds size	927

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig109.6.2	prot_P-littoralis_Contig109.6.2	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig109 43604..47262 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789415.9055026-UTR-P-littoralis_Contig109:43208..43603	1680789415.9055026-UTR-P-littoralis_Contig109:43208..43603	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig109 43209..43603 -
1680789415.9693549-UTR-P-littoralis_Contig109:47262..47377	1680789415.9693549-UTR-P-littoralis_Contig109:47262..47377	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig109 47263..47377 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789415.921238-CDS-P-littoralis_Contig109:43603..43723	1680789415.921238-CDS-P-littoralis_Contig109:43603..43723	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig109 43604..43723 -
1680789415.931331-CDS-P-littoralis_Contig109:44233..44368	1680789415.931331-CDS-P-littoralis_Contig109:44233..44368	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig109 44234..44368 -
1680789415.939014-CDS-P-littoralis_Contig109:44613..44730	1680789415.939014-CDS-P-littoralis_Contig109:44613..44730	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig109 44614..44730 -
1680789415.9503713-CDS-P-littoralis_Contig109:44970..45115	1680789415.9503713-CDS-P-littoralis_Contig109:44970..45115	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig109 44971..45115 -
1680789415.9587348-CDS-P-littoralis_Contig109:46852..47262	1680789415.9587348-CDS-P-littoralis_Contig109:46852..47262	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig109 46853..47262 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig109:43209..47377-
coding sequence from alignment at P-littoralis_Contig109:43209..47377-

protein sequence of mRNA_P-littoralis_Contig109.6.2

>prot_P-littoralis_Contig109.6.2 ID=prot_P-littoralis_Contig109.6.2|Name=mRNA_P-littoralis_Contig109.6.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=309bp
MGLRREMVVATSLLSLMAMVSGYLPPSFFSPDGYMTGCGSTATTAVATCS
TGTAVPPPRRQAYTRLSLNKEDLPDESIRQIAAANQRVKDLEEEYWKSLD
ADEIAIERKCASGLACLKAPGMLEKAAEYYTSASELSPPSARTWPLGLVL
YYLGRYEEAAVRLDTDIRSFEKQFEECATDERIWQAAAWIRGAGEAGADV
EQVAAALPPLSIPEPNALRRTVYNMFRGGDTPEDVQRVAKLNADGIDYLG
VEFFFKVFMGLYHDAHRNEDEAERYIIAACESKYPKPDDLWYHTPRIHAK
ARGWTIPE*

mRNA from alignment at P-littoralis_Contig109:43209..47377-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig109.6.2 ID=mRNA_P-littoralis_Contig109.6.2|Name=mRNA_P-littoralis_Contig109.6.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4169bp|location=Sequence derived from alignment at P-littoralis_Contig109:43209..47377- (Pylaiella littoralis U1_48)
GCTTCATTCCATGCACGGAGCTCCGCACAGTCCCATCTCGCAGCAGCAGC
GTGTTGTGTTGGTTTTGCATGTTTAGGTTTGTGTAGCACAGCCAGCAGGG
CCACACTCAAGAGATATGGGCTTGCGTAGAGAGATGGTCGTAGCTACCTC
GCTTCTGTCGCTCATGGCGATGGTGTCAGGTTACCTGCCTCCGTCTTTCT
TCTCCCCTGATGGCTACATGACTGGTTGCGGCTCAACTGCTACAACGGCA
GTCGCCACCTGTTCTACCGGTACTGCTGTTCCCCCACCGAGACGACAAGC
CTACACGAGGCTGTCATTAAACAAAGAAGATCTGCCGGACGAGAGCATTC
GACAGATTGCAGCCGCCAACCAGCGCGTGAAAGATCTGGAGGAAGAGTAT
TGGAAATCACTAGATGCCGATGAGATCGCGATCGAGAGAAAATGTGCCTC
TGGTCTTGCTTGTCTGAAGGCACCAGGAATGCTAGAAAAAGCGGCGGAGT
ACTACACCTCCGCCTCGGAACTCAGGTGTGTCATGATGACGGGTGCTGTT
TATTTGCAATTTGGGGTGGGATGGTCGGAGAAAGGTCATCTCTGCGTGAG
ACGTTCAACGTCTTTCGTGAAAGCATGCCGCTGATCTTCACTTTGCTTGC
GTTCTTTCTTTGAGTATTAATCTCACAGCGGTTGCCCCTCAATGCTCAGA
CACACGTGCTCCTGCTGGATGCATACTGCTGTATACTAGGGAGTACATGC
TTGTTGGGGAGCTACATATGGTAGCTGCAAGATACACCGAAGAGGGAACA
CGGGAGCACGGGGTGTATCTTTTAGAGGCTACGCGGTGTTAGCATGCGGG
GATATGACAACGGCCTACTGGTGTACGTCGTATGTGTTGTGTTGTCATCC
CATATTCTCTGGCACACTAGTCTGCACCTTGCGGTTCAAACTACAGGCTA
GGCCCATCGACGGGGTCACACAGGAGGAAGGTCAACACAGGAGGAGTTAC
CTCCACCTTCCTTCTGCGGTACATGCGTGAGATTTTTTCTCGCGAGCAGG
GGTCCGCGGTCCCTACCCTCGTCGGCGAAACCGAATCTGCTTTTACTAAC
AGCATAGCCGCTTTCAAAGTAGCAAAGGAACACATTCACCGGGAATCGAA
CGCCCGTTCCTCTGCATCTAGTGGTTGACGAGGGGACCACTAGTCCACCG
GTGTGTTTTCCCGAGAGTGGGGGGTAGGGTTTGTGCGCGATCGGCTCAAA
GAGTCTAATCTCCTAGGTTCAACTATAATTGGATGTATCACACACGTGCT
ATGCACCGGAATACCGGTAAATGGGATGACAAGACACACATGCACTCACA
CACACTTTTCGGTAAAATCCTCGGGGCAGCTCGCGCTTTTGCTCCTGTCG
ATAGGCACTCCCCGCCTTCGCTGAGGAGTTTCTCGCTTCACACATCAGTT
GGGACAAAACATGAACGCGGTATGCCCCCGAACTGGGACAGCTTCAAGGT
TGTGATGGTCAGAAGAGGGTAACAGGTACCTCGCTTTGTTGTCTTCAAAT
GGAATCTTTGATTTTTGGCCCTCTTTCACCAGATGATAAACGCTGAACGT
GTACATGGGTCGCTCTTGTTGTTGGGTGAAGTAGAGAGGCCTTCACCAGC
CTCACCAACGAGTGTATAATTCCATATCAAACGTACGAGTGAGAGGAGAG
GCATCTCGTTTCTCATCGGCGGGAAACATATTTCCCCGCTTTTCCACCTC
TACCTCCCGCAGCACTGTCATCCTAGGTGAACATGCCTCCTACTCCGTCA
CGAAACCCACTACGCAGATCTCCTCTGGACTAAATCTATAGACTGGGCAC
GAGCACAATTCGATTAGATGTACCCCCTCTCTGTTACCCAACGTCCCCTT
TCCTCTCTTCATGGCCGGCATCGCACCCTTCCTTGGCCTTCTCCATGGCA
GGTCCGATTTTGGCCTTTATCCTCAATCATCCCCCAGCTGTTCTCCCTTG
TGACACACATCGGCAATCTATGTTTGATACGAATATTCACGAATTATTTC
GCTCAGTTTTTGTGACACGCAGAGCTAGCCATACCTAAAAAGAGCTTCGG
TAGATCATTTGATGAAACTGAAGCCGTGGTCTTCAGTCAACGGTATCCGT
TCCGAGAAAATCGCCTCAGGCATTTTGTTGTTTACGCTGACGGCCAACTT
GGCTCTTCCCCCCCGCGCCGCCCACACTCTACCTGCTCCCCTCCACACCC
CCGCCTCCTCAGCCCACCGTCCGCGCGAACGTGGCCGTTGGGGTTGGTGT
TGTATTACCTCGGGCGCTACGAGGAAGCGGCAGTTCGGCTGGACACGGAC
ATCAGGTCTTTCGAGAAGCAGTTCGAGGAGTGCGCGACGGATGAAAGGAT
CTGGCAGGTAGGTTTGTTAGCGGTTGCCCGGCCGACTCGAAGCAAGCGGT
ATGATTTCGCCCCTGACCTTCCTGGCGTCGTTTGTGCCCGCGTGTACCGT
TGGGAAGTTTGAAACTCTGCCGTGGTTTGTGTGCGCTGACATTAAAGTGT
TTCACGAATGTCATCGGAAATCCTTGGTTTTTCTTGCTTGATGTGTCTCG
ATCATGCAAACGCTTCTTCCCTCGTTGTCCCCTTGATACTCCGGCAGGCT
GCGGCGTGGATTCGAGGGGCTGGAGAGGCTGGGGCAGACGTAGAACAGGT
CGCAGCAGCCTTGCCTCCGCTCTCGATTCCGGAGCCGAACGCGCTCCGAA
GAACCGTGTACAATGTGAGTCGTTGTTTTCTGATGCCGTGAAGGCTATTT
CGGTATTTCACACTGCGATACGTCGTTTCTCGATGCCGGCGCTGATTTTA
CAGCACAGGGCATACTTACTTGTCTTTGGTATCGTTCGCACGTAACCGGG
CGACACTATGGCAAACTGACTTGTGCATGCTTAGACGGAACATTCAGAGG
CGTTTCAGCTGACTTCTTCTTCGGTGTGCTCGGATGCATTTGTGCGCTCA
ATGTTTTAGATGTTTCGTGGTGGAGACACCCCTGAGGACGTCCAACGGGT
CGCCAAGTTGAATGCGGACGGCATCGACTACCTTGGCGTGGAGTTTTTCT
TCAAGGTGTTCATGGGGCTATATCATGATGCACATCGGAACGAGGTGACA
ACAACGGAAGACGCTCTCCGTTTATTGTGGTGTTTCATTGTCGGATGGTG
CCGACGTTGATGCGTTTCATATTCGTGTCGGCCCTGACCTGCCGAGATTT
TTCTCCTCCGTCGTTCGCACATCACATCACCGTTTCTGGTTTTTTGTCAG
AACCCAACTTGCACTCGTAATTATTTTGTGTTCGTGGATGAGTTTCTAGC
AATTATATTTGCCGCCTTTTATCCATGTCTCTGTGCAGATCTGTAGTTTT
CGCCCGTCTGCTCTTGTCGCCGTACCTCGATTCCATGAACTTTTGATGCA
CCTCCTCCAGTTTGAACTACAGCAAGAGAACACCCCGGGGAAGTTTCCAC
CGCTGCATTGTTGTCATTTCCTGCCAATCTTTTCGCACGGGGACGCGGTT
GAGAAACCAATCCTCCTCGTGTTAATTTTCATGCCCCGTGTAGCCTCTGC
CTTGCCCTTGATGCCCTGACCGTTCTCGACCATCACCCCACGCACGGTGT
CCAGGACGAAGCGGAGAGATACATCATAGCGGCGTGCGAGAGCAAGTACC
CCAAACCGGACGATCTGTGGTACCACACGCCAAGGATACACGCCAAGGCT
CGAGGGTGGACAATACCGGAATAACGGCACGAAGCCCGTTGTACATGATA
GCCTTGTAGCCTTGCATCTCCTTGCACTTCGTATAGTTTTTGTTTGTCAT
AGGACATCGTGCAGTTGTCATGTCAGACCAATGACCAAGTTTTGGTATTT
CGTTCGGAAACTGTAGAATATCGTCCGCGAGGTTAGTTTGTACTTTTTGC
CGGCATTGGCGGACGCGGGAATCATGCTTGCCTGAAGAGGAGAGTACACC
AGCGCGCGGTGAAAATAGTATGTGTTGACAACGGACAAAGAACAACCCCA
GTCCAACACGGCCGTGAGAGACGCAGGTGACATATCTCCCTGTGGCGTCC
GAGTGTCCCGTGCCACATGCAGGTACTGCCGCACTTGTCGATGTGGGTTT
ACTTTGCCATCATTTTCTC

Coding sequence (CDS) from alignment at P-littoralis_Contig109:43209..47377-

>mRNA_P-littoralis_Contig109.6.2 ID=mRNA_P-littoralis_Contig109.6.2|Name=mRNA_P-littoralis_Contig109.6.2|organism=Pylaiella littoralis U1_48|type=CDS|length=927bp|location=Sequence derived from alignment at P-littoralis_Contig109:43209..47377- (Pylaiella littoralis U1_48)
ATGGGCTTGCGTAGAGAGATGGTCGTAGCTACCTCGCTTCTGTCGCTCAT
GGCGATGGTGTCAGGTTACCTGCCTCCGTCTTTCTTCTCCCCTGATGGCT
ACATGACTGGTTGCGGCTCAACTGCTACAACGGCAGTCGCCACCTGTTCT
ACCGGTACTGCTGTTCCCCCACCGAGACGACAAGCCTACACGAGGCTGTC
ATTAAACAAAGAAGATCTGCCGGACGAGAGCATTCGACAGATTGCAGCCG
CCAACCAGCGCGTGAAAGATCTGGAGGAAGAGTATTGGAAATCACTAGAT
GCCGATGAGATCGCGATCGAGAGAAAATGTGCCTCTGGTCTTGCTTGTCT
GAAGGCACCAGGAATGCTAGAAAAAGCGGCGGAGTACTACACCTCCGCCT
CGGAACTCAGCCCACCGTCCGCGCGAACGTGGCCGTTGGGGTTGGTGTTG
TATTACCTCGGGCGCTACGAGGAAGCGGCAGTTCGGCTGGACACGGACAT
CAGGTCTTTCGAGAAGCAGTTCGAGGAGTGCGCGACGGATGAAAGGATCT
GGCAGGCTGCGGCGTGGATTCGAGGGGCTGGAGAGGCTGGGGCAGACGTA
GAACAGGTCGCAGCAGCCTTGCCTCCGCTCTCGATTCCGGAGCCGAACGC
GCTCCGAAGAACCGTGTACAATATGTTTCGTGGTGGAGACACCCCTGAGG
ACGTCCAACGGGTCGCCAAGTTGAATGCGGACGGCATCGACTACCTTGGC
GTGGAGTTTTTCTTCAAGGTGTTCATGGGGCTATATCATGATGCACATCG
GAACGAGGACGAAGCGGAGAGATACATCATAGCGGCGTGCGAGAGCAAGT
ACCCCAAACCGGACGATCTGTGGTACCACACGCCAAGGATACACGCCAAG
GCTCGAGGGTGGACAATACCGGAATAA